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Conserved domains on  [gi|1491266064|gb|RLI35842|]
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DUF2284 domain-containing protein, partial [Candidatus Bathyarchaeota archaeon]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2284 super family cl02248
Predicted metal-binding protein (DUF2284); Members of this family of metal-binding ...
 1-48 1.99e-14

Predicted metal-binding protein (DUF2284); Members of this family of metal-binding hypothetical bacterial proteins have no known function.


The actual alignment was detected with superfamily member COG5423:

Pssm-ID: 470506  Cd Length: 183  Bit Score: 62.68  E-value: 1.99e-14
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1491266064   1 PGGKCLHPYEARPSMEALGINVYETCVKAGVPL---PSPEEKVLWTGVLLV 48
Cdd:COG5423   132 PDEPCRFPDKARPSMEAYGIDVFKTAKKAGLPLeflPDKNDTVTYYGLVLL 182
 
Name Accession Description Interval E-value
COG5423 COG5423
Predicted metal-binding protein [Function unknown];
1-48 1.99e-14

Predicted metal-binding protein [Function unknown];


Pssm-ID: 444175  Cd Length: 183  Bit Score: 62.68  E-value: 1.99e-14
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1491266064   1 PGGKCLHPYEARPSMEALGINVYETCVKAGVPL---PSPEEKVLWTGVLLV 48
Cdd:COG5423   132 PDEPCRFPDKARPSMEAYGIDVFKTAKKAGLPLeflPDKNDTVTYYGLVLL 182
DUF2284 pfam10050
Predicted metal-binding protein (DUF2284); Members of this family of metal-binding ...
 2-48 3.08e-12

Predicted metal-binding protein (DUF2284); Members of this family of metal-binding hypothetical bacterial proteins have no known function.


Pssm-ID: 431017  Cd Length: 161  Bit Score: 56.46  E-value: 3.08e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1491266064   2 GGKCLHPYEARPSMEALGINVYETCVKAGVPLP-SPEEKVLWTGVLLV 48
Cdd:pfam10050 114 GEPCRFPEKARPSMEAYGIDVFKTAEKAGMPYNvGPENTVTYFGLVLI 161
 
Name Accession Description Interval E-value
COG5423 COG5423
Predicted metal-binding protein [Function unknown];
1-48 1.99e-14

Predicted metal-binding protein [Function unknown];


Pssm-ID: 444175  Cd Length: 183  Bit Score: 62.68  E-value: 1.99e-14
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1491266064   1 PGGKCLHPYEARPSMEALGINVYETCVKAGVPL---PSPEEKVLWTGVLLV 48
Cdd:COG5423   132 PDEPCRFPDKARPSMEAYGIDVFKTAKKAGLPLeflPDKNDTVTYYGLVLL 182
DUF2284 pfam10050
Predicted metal-binding protein (DUF2284); Members of this family of metal-binding ...
 2-48 3.08e-12

Predicted metal-binding protein (DUF2284); Members of this family of metal-binding hypothetical bacterial proteins have no known function.


Pssm-ID: 431017  Cd Length: 161  Bit Score: 56.46  E-value: 3.08e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1491266064   2 GGKCLHPYEARPSMEALGINVYETCVKAGVPLP-SPEEKVLWTGVLLV 48
Cdd:pfam10050 114 GEPCRFPEKARPSMEAYGIDVFKTAEKAGMPYNvGPENTVTYFGLVLI 161
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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