|
Name |
Accession |
Description |
Interval |
E-value |
| KdpD |
COG2205 |
K+-sensing histidine kinase KdpD [Signal transduction mechanisms]; |
70-287 |
2.41e-41 |
|
K+-sensing histidine kinase KdpD [Signal transduction mechanisms];
Pssm-ID: 441807 [Multi-domain] Cd Length: 239 Bit Score: 143.12 E-value: 2.41e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 70 QLHKERIVLQDGDRRMKANVTAISHDLRTPLTAINSYVDLL--STEPDEAKRAEYLERIKDRTSELKYMTSELFKYSVSS 147
Cdd:COG2205 1 ELEEALEELEELERLKSEFLANVSHELRTPLTSILGAAELLldEEDLSPEERRELLEIIRESAERLLRLIEDLLDLSRLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 148 DNSYEsrLNPEDLDLQRIIEDSLLSFFGELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNVAKYATSSLSVTLSS 227
Cdd:COG2205 81 SGKLS--LELEPVDLAELLEEAVEELRPLAEEKGIRLELDLPPELPLVYADPELLEQVLANLLDNAIKYSPPGGTITISA 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1079631860 228 SR-----VVTITNDAPSLTPVQVSKMFDKYYTV--NDGKESTGLGLSIARDLVESIGGSISASVSDG 287
Cdd:COG2205 159 RRegdgvRISVSDNGPGIPEEELERIFERFYRGdnSRGEGGTGLGLAIVKRIVEAHGGTIWVESEPG 225
|
|
| BaeS |
COG0642 |
Signal transduction histidine kinase [Signal transduction mechanisms]; |
1-283 |
3.87e-35 |
|
Signal transduction histidine kinase [Signal transduction mechanisms];
Pssm-ID: 440407 [Multi-domain] Cd Length: 328 Bit Score: 129.26 E-value: 3.87e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 1 MWIPILLSVIFVAIITVLVIKIVLLSRAFTEIDDQVRDHMDGSDSSSFKLSTSNPKARSLANNLDAELQQLHKERIVLQD 80
Cdd:COG0642 26 LLLLLLLALLLLLALLLLLLLLLLLLLLLALALLALLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLALLLLLEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 81 GDRRMKANVTAISHDLRTPLTAINSYVDLLSTEPDEaKRAEYLERIKDRTSELKYMTSELFKYSvsSDNSYESRLNPEDL 160
Cdd:COG0642 106 ANEAKSRFLANVSHELRTPLTAIRGYLELLLEELDE-EQREYLETILRSADRLLRLINDLLDLS--RLEAGKLELEPEPV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 161 DLQRIIEDSLLSFFGELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNVAKYATSSLS-----VTLSSSRVVTITN 235
Cdd:COG0642 183 DLAELLEEVVELFRPLAEEKGIELELDLPDDLPTVRGDPDRLRQVLLNLLSNAIKYTPEGGTvtvsvRREGDRVRISVED 262
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1079631860 236 DAPSLTPVQVSKMFDKYYTV--NDGKESTGLGLSIARDLVESIGGSISAS 283
Cdd:COG0642 263 TGPGIPPEDLERIFEPFFRTdpSRRGGGTGLGLAIVKRIVELHGGTIEVE 312
|
|
| WalK |
COG5002 |
Sensor histidine kinase WalK [Signal transduction mechanisms]; |
1-282 |
1.37e-31 |
|
Sensor histidine kinase WalK [Signal transduction mechanisms];
Pssm-ID: 444026 [Multi-domain] Cd Length: 390 Bit Score: 121.20 E-value: 1.37e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 1 MWIPILLSVIFVAIITVLVIKIVLLSRAFTEIDDQVRDHMDGSDSSSFKLSTSNPKARSLANNLDAELQQLHKERivlqd 80
Cdd:COG5002 91 LLLLLLLLLALLILLLLLALLILLAALLLLLSELLLLLLLLGRLSLRLSALLLGLLLLAAVERDITELERLEQMR----- 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 81 gdRRMKANVtaiSHDLRTPLTAINSYVDLLSTEP--DEAKRAEYLERIKDRTSELKYMTSELFKYSvSSDNSyESRLNPE 158
Cdd:COG5002 166 --REFVANV---SHELRTPLTSIRGYLELLLDGAadDPEERREYLEIILEEAERLSRLVNDLLDLS-RLESG-ELKLEKE 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 159 DLDLQRIIEDSLLSFFGELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNVAKYATSSLSVTLSSSR-----VVTI 233
Cdd:COG5002 239 PVDLAELLEEVVEELRPLAEEKGIELELDLPEDPLLVLGDPDRLEQVLTNLLDNAIKYTPEGGTITVSLREeddqvRISV 318
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1079631860 234 TNDAPSLTPVQVSKMFDKYYTVNDG----KESTGLGLSIARDLVESIGGSISA 282
Cdd:COG5002 319 RDTGIGIPEEDLPRIFERFYRVDKSrsreTGGTGLGLAIVKHIVEAHGGRIWV 371
|
|
| COG4191 |
COG4191 |
Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal ... |
66-283 |
5.96e-21 |
|
Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms];
Pssm-ID: 443345 [Multi-domain] Cd Length: 361 Bit Score: 91.40 E-value: 5.96e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 66 AELQQLHKERIVLQdgdrRMKA--NVTA-ISHDLRTPLTAINSYVDLL----STEPDEAKRAEYLERIK---DRTSELky 135
Cdd:COG4191 124 EELRELQEQLVQSE----KLAAlgELAAgIAHEINNPLAAILGNAELLrrrlEDEPDPEELREALERILegaERAAEI-- 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 136 mTSEL--FkysvssdnSYESRLNPEDLDLQRIIEDSLLSFFGELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNv 213
Cdd:COG4191 198 -VRSLraF--------SRRDEEEREPVDLNELIDEALELLRPRLKARGIEVELDLPPDLPPVLGDPGQLEQVLLNLLIN- 267
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1079631860 214 AKYATSSLSVTLSSSR--------VVTITNDAPSLTPVQVSKMFDKYYTVNDGKESTGLGLSIARDLVESIGGSISAS 283
Cdd:COG4191 268 AIDAMEEGEGGRITIStrregdyvVISVRDNGPGIPPEVLERIFEPFFTTKPVGKGTGLGLSISYGIVEKHGGRIEVE 345
|
|
| BaeS_SmeS |
NF012163 |
sensor histidine kinase efflux regulator BaeS; |
61-295 |
3.13e-19 |
|
sensor histidine kinase efflux regulator BaeS;
Pssm-ID: 411086 [Multi-domain] Cd Length: 457 Bit Score: 87.19 E-value: 3.13e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 61 ANNLDAELQQLHKERIVLQDGDRRMKANVTAISHDLRTPLTAINSYVDLLStepDEAKRA--EYLERIKDRTSELKYMTS 138
Cdd:NF012163 216 NDELGKLAQDFNQLASTLEKNEQMRRDFMADISHELRTPLAVLRAELEAIQ---DGIRKFtpESLDSLQAEVGTLTKLVD 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 139 ELFKYSVSSDNSYESRLNPedLDLQRIIEDSLLSFFGELSSRGITPSTSFPSSPVIVNcDRKTLMRIFDNIFSNVAKYAT 218
Cdd:NF012163 293 DLHDLSMSDEGALAYQKAS--VDLVPLLEVEGGAFRERFASAGLELEVSLPDSSLVFG-DRDRLMQLFNNLLENSLRYTD 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 219 SSLSVTLSSSRV-----VTITNDAPSLTPVQVSKMFDKYYTVNDGKE----STGLGLSIARDLVESIGGSISASVSD-GF 288
Cdd:NF012163 370 SGGSLHISASQRpkevtLTVADSAPGVSDEQLARLFERFYRVEVSRNrasgGSGLGLAISLNIVQAHGGTLHAAHSPlGG 449
|
....*..
gi 1079631860 289 LSVEIKM 295
Cdd:NF012163 450 LRIVVTL 456
|
|
| NtrY |
COG5000 |
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism ... |
84-283 |
8.36e-19 |
|
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms];
Pssm-ID: 444024 [Multi-domain] Cd Length: 422 Bit Score: 85.78 E-value: 8.36e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 84 RMKA--NVTA-ISHDLRTPLTAINSYVDLLS------TEPDEAKRAEYLERIKDRTSELKYMTSELFKYSvssdnsYESR 154
Cdd:COG5000 197 RLAAwgELARrIAHEIKNPLTPIQLSAERLRrkladkLEEDREDLERALDTIIRQVDRLKRIVDEFLDFA------RLPE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 155 LNPEDLDLQRIIEDSLLSFFGELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNvAKYATSS------LSVTLSSS 228
Cdd:COG5000 271 PQLEPVDLNELLREVLALYEPALKEKDIRLELDLDPDLPEVLADRDQLEQVLINLLKN-AIEAIEEggeievSTRREDGR 349
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1079631860 229 RVVTITNDAPSLTPVQVSKMFDKYYTvndGKES-TGLGLSIARDLVESIGGSISAS 283
Cdd:COG5000 350 VRIEVSDNGPGIPEEVLERIFEPFFT---TKPKgTGLGLAIVKKIVEEHGGTIELE 402
|
|
| COG4251 |
COG4251 |
Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal ... |
1-282 |
7.04e-18 |
|
Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms];
Pssm-ID: 443393 [Multi-domain] Cd Length: 503 Bit Score: 83.30 E-value: 7.04e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 1 MWIPILLSVIFVAIITVLVIKIVLLSRAFTEIDDQVRDHMDGSDSSSFKLSTSNPKARSLANNLDAELQQLHKERIVLQD 80
Cdd:COG4251 184 LLLVLLLLLLLLLLLLLLLLRLLLELLLLLEAELLLSLGGGLGLLLLLLLLLVLLLLLILLLLLLILVLELLELRLELEE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 81 GDRRMKANVT--------------AISHDLRTPLTAINSYVDLLSTE-----PDEAKraEYLERIKDRTSELKYMTSELF 141
Cdd:COG4251 264 LEEELEERTAelersneeleqfayVASHDLREPLRKISGFSQLLEEDygdklDEEGR--EYLERIRDAAERMQALIDDLL 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 142 KYS-VSSdnsyeSRLNPEDLDLQRIIEDSLLSFFGELSSRGITpsTSFPSSPViVNCDRKTLMRIFDNIFSNVAKYATSS 220
Cdd:COG4251 342 AYSrVGR-----QELEFEPVDLNELLEEVLEDLEPRIEERGAE--IEVGPLPT-VRGDPTLLRQVFQNLISNAIKYSRPG 413
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1079631860 221 LS-------VTLSSSRVVTITNDAPSLTPVQVSKMFDKYYTVN--DGKESTGLGLSIARDLVESIGGSISA 282
Cdd:COG4251 414 EPprieigaEREGGEWVFSVRDNGIGIDPEYAEKIFEIFQRLHsrDEYEGTGIGLAIVKKIVERHGGRIWV 484
|
|
| NtrB |
COG3852 |
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms]; |
58-281 |
1.30e-15 |
|
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms];
Pssm-ID: 443061 [Multi-domain] Cd Length: 361 Bit Score: 76.04 E-value: 1.30e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 58 RSLANNLDAELQQLHKERIVlqdgdRRMKANvtaISHDLRTPLTAINSYVDLLSTEPDEAKRAEYLERIKDRTSELKYMT 137
Cdd:COG3852 116 ITERKRLERELRRAEKLAAV-----GELAAG---LAHEIRNPLTGIRGAAQLLERELPDDELREYTQLIIEEADRLNNLV 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 138 SELFKYSVssdnsyESRLNPEDLDLQRIIEDsLLSFFGELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSN----- 212
Cdd:COG3852 188 DRLLSFSR------PRPPEREPVNLHEVLER-VLELLRAEAPKNIRIVRDYDPSLPEVLGDPDQLIQVLLNLVRNaaeam 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 213 --------VAKYATSSLSVTLSSSRVV--TITNDAPSLTPVQVSKMFDKYYTvndGKES-TGLGLSIARDLVESIGGSIS 281
Cdd:COG3852 261 peggtitiRTRVERQVTLGGLRPRLYVriEVIDNGPGIPEEILDRIFEPFFT---TKEKgTGLGLAIVQKIVEQHGGTIE 337
|
|
| PRK11466 |
PRK11466 |
hybrid sensory histidine kinase TorS; Provisional |
40-287 |
1.28e-14 |
|
hybrid sensory histidine kinase TorS; Provisional
Pssm-ID: 236914 [Multi-domain] Cd Length: 914 Bit Score: 74.17 E-value: 1.28e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 40 MDGSDSSSFKLSTSNPKARSLANNLDAELQQL---HKE-RIVLQDGDRRMKANVTAISHDLRTPLTAINSYVDLLSTEPD 115
Cdd:PRK11466 395 MDAFRSNVHALNRHREQLAAQVKARTAELQELvieHRQaRAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPA 474
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 116 EAKRAEYLERIKDRTSELKYMTSELFKYSVSSDNSYESRLNPEDLDLQRIIEDSLLSFFGELSSRGITPSTSFPSS-PVI 194
Cdd:PRK11466 475 LNAQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATDIADDlPTA 554
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 195 VNCDRKTLMRIFDNIFSNVAKYATSSLSVTLS----SSRVVTITNDAPSLTPVQVSKMFDKYYTVNDGKESTGLGLSIAR 270
Cdd:PRK11466 555 LMGDPRRIRQVITNLLSNALRFTDEGSIVLRSrtdgEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRGGTGLGLTISS 634
|
250
....*....|....*..
gi 1079631860 271 DLVESIGGSISASVSDG 287
Cdd:PRK11466 635 RLAQAMGGELSATSTPE 651
|
|
| PRK10549 |
PRK10549 |
two-component system sensor histidine kinase BaeS; |
2-286 |
6.81e-13 |
|
two-component system sensor histidine kinase BaeS;
Pssm-ID: 182539 [Multi-domain] Cd Length: 466 Bit Score: 68.51 E-value: 6.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 2 WIPILLSVIFVAIITVLvikivlLSRAFTEiddQVRDHMDGSDsssfKLSTSNPKARSLANNLDaELQQLhkerivLQDG 81
Cdd:PRK10549 167 WLIVALSTLLAALATFL------LARGLLA---PVKRLVEGTH----KLAAGDFTTRVTPTSRD-ELGRL------AQDF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 82 DR---------RMKANVTA-ISHDLRTPLTAInsyvdllstepdeakRAEyLERIKD--R--TSE-----------LKYM 136
Cdd:PRK10549 227 NQlastlekneQMRRDFMAdISHELRTPLAVL---------------RGE-LEAIQDgvRkfTPEsvaslqaevgtLTKL 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 137 TSELFKYSVSSDNSYESRLNPedLDLQRIIEDSLLSFFGELSSRGITPSTSFPSSpVIVNCDRKTLMRIFDNIFSNVAKY 216
Cdd:PRK10549 291 VDDLHQLSLSDEGALAYRKTP--VDLVPLLEVAGGAFRERFASRGLTLQLSLPDS-ATVFGDPDRLMQLFNNLLENSLRY 367
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1079631860 217 ATSSLSVTLSSSR-----VVTITNDAPSLTPVQVSKMFDKYY----TVNDGKESTGLGLSIARDLVESIGGSISASVSD 286
Cdd:PRK10549 368 TDSGGSLHISAEQrdktlRLTFADSAPGVSDEQLQKLFERFYrtegSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSP 446
|
|
| PRK10490 |
PRK10490 |
sensor protein KdpD; Provisional |
49-283 |
1.55e-12 |
|
sensor protein KdpD; Provisional
Pssm-ID: 236701 [Multi-domain] Cd Length: 895 Bit Score: 67.75 E-value: 1.55e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 49 KLSTSNPKARslannLDAELQQLHKerivlqdgdrrmkANVTAISHDLRTPLTAI--NSYVDLLSTEPDEAKRAEYLERI 126
Cdd:PRK10490 646 TLTASEEQAR-----LASEREQLRN-------------ALLAALSHDLRTPLTVLfgQAEILTLDLASEGSPHARQASEI 707
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 127 KDRTSELKYMTSELFKYS-VSSDNSyesRLNPEDLDLQRIIEDSLLSFFGELSSRGITpsTSFPSSPVIVNCDRKTLMRI 205
Cdd:PRK10490 708 RQQVLNTTRLVNNLLDMArIQSGGF---NLRKEWLTLEEVVGSALQMLEPGLSGHPIN--LSLPEPLTLIHVDGPLFERV 782
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 206 FDNIFSNVAKYATSSLSV----TLSSSRV-VTITNDAPSLTPVQVSKMFDKYYTVNdgKEST----GLGLSIARDLVESI 276
Cdd:PRK10490 783 LINLLENAVKYAGAQAEIgidaHVEGERLqLDVWDNGPGIPPGQEQLIFDKFARGN--KESAipgvGLGLAICRAIVEVH 860
|
....*..
gi 1079631860 277 GGSISAS 283
Cdd:PRK10490 861 GGTIWAE 867
|
|
| cztS_silS_copS |
TIGR01386 |
heavy metal sensor kinase; Members of this family contain a sensor histidine kinase domain ... |
5-287 |
1.71e-12 |
|
heavy metal sensor kinase; Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.
Pssm-ID: 273593 [Multi-domain] Cd Length: 457 Bit Score: 67.41 E-value: 1.71e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 5 ILLSVIFVAIITVLVIKIVLLS-----RAFTEIDDQVrdhmdGSDSSSFKLSTSN--PKARSLANNLDAELQQLhkeriv 77
Cdd:TIGR01386 166 LILIAVLLVLLTALLGWWITRLgleplRRLSAVAARI-----SPESLDQRLDPSRapAELRELAQSFNAMLGRL------ 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 78 lQDGDRRMKANVTAISHDLRTPLTAINSYVDLLSTEPDEAKraEYLERIKDRTSELKYMT----SELFkySVSSDNSyES 153
Cdd:TIGR01386 235 -EDAFQRLSQFSADLAHELRTPLTNLLGQTQVALSQPRTGE--EYREVLESNLEELERLSrmvsDMLF--LARADNG-QL 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 154 RLNPEDLDLQRIIeDSLLSFF---GELSSRGITPSTSfpsspVIVNCDRKTLMRIFDNIFSNVAKYATSSLSVTLSSSR- 229
Cdd:TIGR01386 309 ALERVRLDLAAEL-AKVAEYFeplAEERGVRIRVEGE-----GLVRGDPQMFRRAISNLLSNALRHTPDGGTITVRIERr 382
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1079631860 230 ----VVTITNDAPSLTPVQVSKMFDKYYTVN----DGKESTGLGLSIARDLVESIGGSISASVSDG 287
Cdd:TIGR01386 383 sdevRVSVSNPGPGIPPEHLSRLFDRFYRVDparsNSGEGTGLGLAIVRSIMEAHGGRASAESPDG 448
|
|
| HATPase_c |
pfam02518 |
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the ... |
198-287 |
2.32e-12 |
|
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.
Pssm-ID: 460579 [Multi-domain] Cd Length: 109 Bit Score: 62.39 E-value: 2.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 198 DRKTLMRIFDNIFSNVAKYATSSLSVT----LSSSRVVTITNDAPSLTPVQVSKMFDKYYTVNDGKES-TGLGLSIARDL 272
Cdd:pfam02518 2 DELRLRQVLSNLLDNALKHAAKAGEITvtlsEGGELTLTVEDNGIGIPPEDLPRIFEPFSTADKRGGGgTGLGLSIVRKL 81
|
90
....*....|....*
gi 1079631860 273 VESIGGSISASVSDG 287
Cdd:pfam02518 82 VELLGGTITVESEPG 96
|
|
| cpxA |
PRK09470 |
envelope stress sensor histidine kinase CpxA; |
92-295 |
8.87e-12 |
|
envelope stress sensor histidine kinase CpxA;
Pssm-ID: 236532 [Multi-domain] Cd Length: 461 Bit Score: 64.95 E-value: 8.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 92 ISHDLRTPLTAINSYVDLLSTEPDEAKRaeyLERIKDRTSELKYMTSELFkysVSSDNSYESRLNPEDLDL----QRIIE 167
Cdd:PRK09470 250 ISHELRTPLTRLQLATALLRRRQGESKE---LERIETEAQRLDSMINDLL---VLSRNQQKNHLERETFKAnslwSEVLE 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 168 DSllSFfgELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNVAKYATSSLSVTLSSSR---VVTITNDAPSLTPVQ 244
Cdd:PRK09470 324 DA--KF--EAEQMGKSLTVSAPPGPWPINGNPNALASALENIVRNALRYSHTKIEVAFSVDKdglTITVDDDGPGVPEEE 399
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1079631860 245 VSKMFDKYYTVNDG--KES--TGLGLSIARDLVESIGGSISASVSD-GFLSVEIKM 295
Cdd:PRK09470 400 REQIFRPFYRVDEArdRESggTGLGLAIVENAIQQHRGWVKAEDSPlGGLRLTIWL 455
|
|
| HATPase_c |
smart00387 |
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases. |
198-287 |
4.48e-11 |
|
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
Pssm-ID: 214643 [Multi-domain] Cd Length: 111 Bit Score: 58.81 E-value: 4.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 198 DRKTLMRIFDNIFSNVAKYATSSLS-----VTLSSSRVVTITNDAPSLTPVQVSKMFDKYYTVNDGK---ESTGLGLSIA 269
Cdd:smart00387 2 DPDRLRQVLSNLLDNAIKYTPEGGRitvtlERDGDHVEITVEDNGPGIPPEDLEKIFEPFFRTDKRSrkiGGTGLGLSIV 81
|
90
....*....|....*...
gi 1079631860 270 RDLVESIGGSISASVSDG 287
Cdd:smart00387 82 KKLVELHGGEISVESEPG 99
|
|
| PRK15347 |
PRK15347 |
two component system sensor kinase; |
50-281 |
4.92e-11 |
|
two component system sensor kinase;
Pssm-ID: 237951 [Multi-domain] Cd Length: 921 Bit Score: 63.12 E-value: 4.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 50 LSTSNPKARSLANNLDAELQQLHKERIVLQDGDRRMKANVTAISHDLRTPLTAINSYVDLLSTEPDEAKRAEYLERIKDR 129
Cdd:PRK15347 363 LDTLNEQYDTLENKVAERTQALAEAKQRAEQANKRKSEHLTTISHEIRTPLNGVLGALELLQNTPLTAEQMDLADTARQC 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 130 TSELKYMTSELFKYS-VSSDnsyESRLNPEDLDLQRIIEDSLLSFFGELSSRGITPSTSF-PSSPVIVNCDRKTLMRIFD 207
Cdd:PRK15347 443 TLSLLAIINNLLDFSrIESG---QMTLSLEETALLPLLDQAMLTIQGPAQSKSLTLRTFVgAHVPLYLHLDSLRLRQILV 519
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1079631860 208 NIFSNVAKYATSSLSVTLSSSR----VVTITNDAPSLTPVQVSKMFDKYYTVNDGKESTGLGLSIARDLVESIGGSIS 281
Cdd:PRK15347 520 NLLGNAVKFTETGGIRLRVKRHeqqlCFTVEDTGCGIDIQQQQQIFTPFYQADTHSQGTGLGLTIASSLAKMMGGELT 597
|
|
| PRK11360 |
PRK11360 |
two-component system sensor histidine kinase AtoS; |
89-280 |
8.76e-11 |
|
two-component system sensor histidine kinase AtoS;
Pssm-ID: 236901 [Multi-domain] Cd Length: 607 Bit Score: 62.29 E-value: 8.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 89 VTAISHDLRTPLTAINSYVDLLSTEPDEAKRAEYLERIKDRTSELKYMTSELFKYSVSSdnsyESRLNPedLDLQRIIED 168
Cdd:PRK11360 394 VAGVAHEIRNPLTAIRGYVQIWRQQTSDPPSQEYLSVVLREVDRLNKVIDQLLEFSRPR----ESQWQP--VSLNALVEE 467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 169 SLLSFFGELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNvAKYATSSLSVTLSSSR-------VVTITNDAPSLT 241
Cdd:PRK11360 468 VLQLFQTAGVQARVDFETELDNELPPIWADPELLKQVLLNILIN-AVQAISARGKIRIRTWqysdgqvAVSIEDNGCGID 546
|
170 180 190
....*....|....*....|....*....|....*....
gi 1079631860 242 PVQVSKMFDKYYTVNDgkESTGLGLSIARDLVESIGGSI 280
Cdd:PRK11360 547 PELLKKIFDPFFTTKA--KGTGLGLALSQRIINAHGGDI 583
|
|
| HATPase_BaeS-like |
cd16946 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
198-285 |
2.30e-10 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli BasS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) similar to Escherichia coli BaeS HK of the BaeS/BaeR two-component regulatory system (TCS), which responds to envelope stress. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and a HAMP sensory domain.
Pssm-ID: 340422 [Multi-domain] Cd Length: 109 Bit Score: 56.70 E-value: 2.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 198 DRKTLMRIFDNIFSNVAKYATSSLSVTLSSSRV-----VTITNDAPSLTPVQVSKMFDKYYTVNDGKE----STGLGLSI 268
Cdd:cd16946 1 DRDRLQQLFVNLLENSLRYTDTGGKLRIRAAQTpqevrLDVEDSAPGVSDDQLARLFERFYRVESSRNrasgGSGLGLAI 80
|
90
....*....|....*..
gi 1079631860 269 ARDLVESIGGSISASVS 285
Cdd:cd16946 81 CHNIALAHGGTISAEHS 97
|
|
| PRK09959 |
PRK09959 |
acid-sensing system histidine kinase EvgS; |
89-281 |
7.71e-10 |
|
acid-sensing system histidine kinase EvgS;
Pssm-ID: 182169 [Multi-domain] Cd Length: 1197 Bit Score: 59.75 E-value: 7.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 89 VTAISHDLRTPLTAINSYVDLLS-TEPDEAKRAEYLERIKDRTSELKYMTSELFKYSVSSDNSYEsrLNPEDLDLQRIIE 167
Cdd:PRK09959 716 LATMSHEIRTPISSIMGFLELLSgSGLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQ--LQPQWVDIPTLVQ 793
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 168 DSLLSFFGELSSRGI--TPSTSFPSSpVIVNCDRKTLMRIFDNIFSNVAKYATSSLSVTLSSSRVV---------TITND 236
Cdd:PRK09959 794 NTCHSFGAIAASKSIalSCSSTFPDH-YLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIddnhavikmTIMDS 872
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1079631860 237 APSLTPVQVSKMFDKYYTVNDGKEST--GLGLSIARDLVESIGGSIS 281
Cdd:PRK09959 873 GSGLSQEEQQQLFKRYSQTSAGRQQTgsGLGLMICKELIKNMQGDLS 919
|
|
| HisKA |
pfam00512 |
His Kinase A (phospho-acceptor) domain; dimerization and phospho-acceptor domain of histidine ... |
89-140 |
9.69e-09 |
|
His Kinase A (phospho-acceptor) domain; dimerization and phospho-acceptor domain of histidine kinases.
Pssm-ID: 459839 [Multi-domain] Cd Length: 66 Bit Score: 51.06 E-value: 9.69e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1079631860 89 VTAISHDLRTPLTAINSYVDLLSTEPDEAKRAEYLERIKDRTSELKYMTSEL 140
Cdd:pfam00512 6 LANLSHELRTPLTAIRGYLELLRDEKLDEEQREYLETILRSAERLLRLINDL 57
|
|
| HATPase_CpxA-like |
cd16949 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
202-283 |
1.36e-08 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli CpxA; This family includes the histidine kinase-like ATPase (HATPase) domains of two-component sensor histidine kinase (HKs) similar to Escherichia coli CpxA, HK of the CpxA-CpxR two-component regulatory system (TCS) which may function in acid stress and in cell wall stability. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also contain a CpxA family periplasmic domain.
Pssm-ID: 340425 [Multi-domain] Cd Length: 104 Bit Score: 51.56 E-value: 1.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 202 LMRIFDNIFSNVAKYATSSLSVTLSSSR---VVTITNDAPSLTPVQVSKMFDKYYTVNDGKES----TGLGLSIARDLVE 274
Cdd:cd16949 1 LARALENVLRNALRYSPSKILLDISQDGdqwTITITDDGPGVPEDQLEQIFLPFYRVDSARDResggTGLGLAIAERAIE 80
|
....*....
gi 1079631860 275 SIGGSISAS 283
Cdd:cd16949 81 QHGGKIKAS 89
|
|
| HisKA |
cd00082 |
Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed ... |
89-144 |
1.61e-08 |
|
Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-autophosphorylation by the catalytic domain of the histidine kinase. They subsequently transfer the phosphoryl group to the Asp acceptor residue of a response regulator protein. Two-component signalling systems, consisting of a histidine protein kinase that senses a signal input and a response regulator that mediates the output, are ancient and evolutionarily conserved signaling mechanisms in prokaryotes and eukaryotes.
Pssm-ID: 119399 [Multi-domain] Cd Length: 65 Bit Score: 50.29 E-value: 1.61e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 1079631860 89 VTAISHDLRTPLTAINSYVDLL-STEPDEAKRAEYLERIKDRTSELKYMTSELFKYS 144
Cdd:cd00082 8 LANVSHELRTPLTAIRGALELLeEELLDDEEQREYLERIREEAERLLRLINDLLDLS 64
|
|
| PRK09303 |
PRK09303 |
histidine kinase; |
67-280 |
2.25e-08 |
|
histidine kinase;
Pssm-ID: 236462 [Multi-domain] Cd Length: 380 Bit Score: 54.57 E-value: 2.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 67 ELQQLHKERIVLQD----GDR--RMKAnvtaisHDLRTPLTAINSYVD---LLSTEPDEAKRAEYLER----IKDRTSEL 133
Cdd:PRK09303 133 ELFVLRQENETLLEqlkfKDRvlAMLA------HDLRTPLTAASLALEtleLGQIDEDTELKPALIEQlqdqARRQLEEI 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 134 KYMTSELFKysVSSDNSYESRLNPEDLDLQRIIEDSLLSFFGELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNV 213
Cdd:PRK09303 207 ERLITDLLE--VGRTRWEALRFNPQKLDLGSLCQEVILELEKRWLAKSLEIQTDIPSDLPSVYADQERIRQVLLNLLDNA 284
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1079631860 214 AKYATSSLSVTLS-----SSRV-VTITNDAPSLTPVQVSKMFDKYYTV--NDGKESTGLGLSIARDLVESIGGSI 280
Cdd:PRK09303 285 IKYTPEGGTITLSmlhrtTQKVqVSICDTGPGIPEEEQERIFEDRVRLprDEGTEGYGIGLSVCRRIVRVHYGQI 359
|
|
| HisKA |
smart00388 |
His Kinase A (phosphoacceptor) domain; Dimerisation and phosphoacceptor domain of histidine ... |
89-140 |
3.12e-08 |
|
His Kinase A (phosphoacceptor) domain; Dimerisation and phosphoacceptor domain of histidine kinases.
Pssm-ID: 214644 [Multi-domain] Cd Length: 66 Bit Score: 49.49 E-value: 3.12e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1079631860 89 VTAISHDLRTPLTAINSYVDLLSTEPDEAKRAEYLERIKDRTSELKYMTSEL 140
Cdd:smart00388 6 LANLSHELRTPLTAIRGYLELLLDTELSEEQREYLETILREAERLLRLINDL 57
|
|
| envZ |
PRK09467 |
osmolarity sensor protein; Provisional |
62-293 |
9.51e-08 |
|
osmolarity sensor protein; Provisional
Pssm-ID: 236531 [Multi-domain] Cd Length: 435 Bit Score: 52.61 E-value: 9.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 62 NNLDAELQQLHKERIVLQDGdrrmkanvtaISHDLRTPLTAINsyvdlLSTE--PDEakrAEYL-ERIKDRTSELKYMTS 138
Cdd:PRK09467 216 NQMAAGIKQLEDDRTLLMAG----------VSHDLRTPLTRIR-----LATEmmSEE---DGYLaESINKDIEECNAIIE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 139 ELFKYsVSSDNsyesRLNPEDLDLQRIIEDSLLSffgElSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNVAKYAT 218
Cdd:PRK09467 278 QFIDY-LRTGQ----EMPMEMADLNALLGEVIAA---E-SGYEREIETALQPGPIEVPMNPIAIKRALANLVVNAARYGN 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 219 --SSLSVTLSSSRV-VTITNDAPSLTPVQVSKMFdKYYTVND---GKESTGLGLSIARDLVESIGGSISASVS-DGFLSV 291
Cdd:PRK09467 349 gwIKVSSGTEGKRAwFQVEDDGPGIPPEQLKHLF-QPFTRGDsarGSSGTGLGLAIVKRIVDQHNGKVELGNSeEGGLSA 427
|
..
gi 1079631860 292 EI 293
Cdd:PRK09467 428 RA 429
|
|
| PRK11100 |
PRK11100 |
sensory histidine kinase CreC; Provisional |
89-281 |
1.08e-07 |
|
sensory histidine kinase CreC; Provisional
Pssm-ID: 236846 [Multi-domain] Cd Length: 475 Bit Score: 52.54 E-value: 1.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 89 VTAISHDLRTPLTAINSYVDLLSTEPDEAKRAEYLERIKDRTSELKYMTSELFKYSvssdnSYESR---LNPEDLDLQRI 165
Cdd:PRK11100 260 VQTLTHELKSPLAAIRGAAELLQEDPPPEDRARFTGNILTQSARLQQLIDRLLELA-----RLEQRqelEVLEPVALAAL 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 166 IEDSLLSFFGELSSRGITPSTSFPssPVIVNCD----RKTLMRIFDNI--FSNvAKYATSSLSVTLSSSRVVTITNDAPS 239
Cdd:PRK11100 335 LEELVEAREAQAAAKGITLRLRPD--DARVLGDpfllRQALGNLLDNAidFSP-EGGTITLSAEVDGEQVALSVEDQGPG 411
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1079631860 240 LTPVQVSKMFDKYYTV---NDGKESTGLGLSIARDLVESIGGSIS 281
Cdd:PRK11100 412 IPDYALPRIFERFYSLprpANGRKSTGLGLAFVREVARLHGGEVT 456
|
|
| PRK10364 |
PRK10364 |
two-component system sensor histidine kinase ZraS; |
92-287 |
1.31e-07 |
|
two-component system sensor histidine kinase ZraS;
Pssm-ID: 236674 [Multi-domain] Cd Length: 457 Bit Score: 52.48 E-value: 1.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 92 ISHDLRTPLTAINSYVDLLSTEPDEAKRAEYLERI----KDRtseLKYMTSELFKYSvssdnsYESRLNPEDLDLQRIIE 167
Cdd:PRK10364 244 VAHEIRNPLSSIKGLAKYFAERAPAGGEAHQLAQVmakeADR---LNRVVSELLELV------KPTHLALQAVDLNDLIN 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 168 DSLLSFFGELSSRGI----TPSTSFPSSPVivNCDRKT--LMRIFDNIFSNVAKYATSSLSVTLSSSRV-VTITNDAPSL 240
Cdd:PRK10364 315 HSLQLVSQDANSREIqlrfTANDTLPEIQA--DPDRLTqvLLNLYLNAIQAIGQHGVISVTASESGAGVkISVTDSGKGI 392
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1079631860 241 TPVQVSKMFDKYYTV-NDGkesTGLGLSIARDLVESIGGSISASVSDG 287
Cdd:PRK10364 393 AADQLEAIFTPYFTTkAEG---TGLGLAVVHNIVEQHGGTIQVASQEG 437
|
|
| HATPase_VanS-like |
cd16923 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
202-286 |
2.67e-07 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Enterococcus faecium VanS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Enterococcus faecium VanS HK of the VanS-VanR two-component regulatory system (TCS) which activates the transcription of vanH, vanA and vanX vancomycin resistance genes. It also contains Ecoli YedV and PcoS, probable members of YedW-YedV TCS and PcoS-PcoR TCS, repectively. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); most also have a HAMP sensor domain.
Pssm-ID: 340400 [Multi-domain] Cd Length: 102 Bit Score: 48.15 E-value: 2.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 202 LMRIFDNIFSNVAKYATSSL-----SVTLSSSRVVTITNDAPSLTPVQVSKMFDKYYTVNDGK--ESTGLGLSIARDLVE 274
Cdd:cd16923 1 LQRVFSNLLSNAIKYSPENTriyitSFLTDDVVNIMFKNPSSHPLDFKLEKLFERFYRGDNSRntEGAGLGLSIAKAIIE 80
|
90
....*....|..
gi 1079631860 275 SIGGSISASVSD 286
Cdd:cd16923 81 LHGGSASAEYDD 92
|
|
| HATPase_YcbM-like |
cd16947 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
189-283 |
8.61e-07 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis YcbM; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis YcbM, a HK of the two-component system YcbM-YcbL. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA).
Pssm-ID: 340423 [Multi-domain] Cd Length: 125 Bit Score: 47.12 E-value: 8.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 189 PSSPVIVNCDRKTLMRIFDNIFSNVAKYATS-----SLSVTLSSSRVVTITNDAPSLTPVQVSKMFDKYYTVNDGKES-- 261
Cdd:cd16947 8 PDRPIYANANTEALQRILKNLISNAIKYGSDgkflgMTLREDEKHVYIDIWDKGKGISETEKDHVFERLYTLEDSRNSak 87
|
90 100
....*....|....*....|....
gi 1079631860 262 --TGLGLSIARDLVESIGGSISAS 283
Cdd:cd16947 88 qgNGLGLTITKRLAESMGGSIYVN 111
|
|
| CitA |
COG3290 |
Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction ... |
91-287 |
4.26e-06 |
|
Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction mechanisms];
Pssm-ID: 442519 [Multi-domain] Cd Length: 389 Bit Score: 47.54 E-value: 4.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 91 AISHDLRTPLTAINSYVDLLstEPDEAKraEYLERIKDRTSELkymtselfkysvssdnSYESRLNPEDLDLQRIiedsL 170
Cdd:COG3290 195 AQRHDFRNHLHTISGLLQLG--EYDEAL--EYIDEISEELQEL----------------IDSLLSRIGNPVLAAL----L 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 171 LSFFGELSSRGIT----PSTSFPSSPVIVNcdrkTLMRIFDNIFSNvAKYATSSLSVTLSSSRV----------VTITND 236
Cdd:COG3290 251 LGKAARARERGIDltidIDSDLPDLPLSDT----DLVTILGNLLDN-AIEAVEKLPEEERRVELsirddgdelvIEVEDS 325
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1079631860 237 APSLTPVQVSKMFDKYYTVNDGKEStGLGLSIARDLVESIGGSISASVSDG 287
Cdd:COG3290 326 GPGIPEELLEKIFERGFSTKLGEGR-GLGLALVKQIVEKYGGTIEVESEEG 375
|
|
| KinE |
COG5809 |
Sporulation sensor histidine kinase E [Cell cycle control, cell division, chromosome ... |
92-288 |
1.98e-05 |
|
Sporulation sensor histidine kinase E [Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms];
Pssm-ID: 444511 [Multi-domain] Cd Length: 489 Bit Score: 45.74 E-value: 1.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 92 ISHDLRTPLTAINSYVDLLSTEPDEaKRAEYLERIkdrTSELKYMTSELFKYSVSSDNsyeSRLNPEDLDLQRIIEDsLL 171
Cdd:COG5809 277 IAHEIRNPLTSLKGFIQLLKDTIDE-EQKTYLDIM---LSELDRIESIISEFLVLAKP---QAIKYEPKDLNTLIEE-VI 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 172 SFFG-ELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNVAK------YATSSLSVTLSSSRVVTITNDAPSLTPVQ 244
Cdd:COG5809 349 PLLQpQALLKNVQIELELEDDIPDILGDENQLKQVFINLLKNAIEampeggNITIETKAEDDDKVVISVTDEGCGIPEER 428
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1079631860 245 VSKMFDKYYTVNDgkESTGLGLSIARDLVESIGGSISASVSDGF 288
Cdd:COG5809 429 LKKLGEPFYTTKE--KGTGLGLMVSYKIIEEHGGKITVESEVGK 470
|
|
| HATPase_BvrS-ChvG-like |
cd16953 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
230-282 |
2.27e-05 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Brucella abortus BvrS and Sinorhizobium meliloti ChvG; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Brucella abortus BvrS of the BvrR-BvrS two-component regulatory system (TCS), which controls cell invasion and intracellular survival, as well as Sinorhizobium meliloti and Agrobacterium tumefaciens ChvG of the ChvI-ChvG TCS necessary for endosymbiosis and pathogenicity in plants. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), an accessory HAMP sensor domain, a periplasmic stimulus-sensing domain, and some also have a sensor N-terminal transmembrane domain.
Pssm-ID: 340429 [Multi-domain] Cd Length: 110 Bit Score: 42.94 E-value: 2.27e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 1079631860 230 VVTITNDAPSLTPVQVSKMFDKYYTVNDGKES----TGLGLSIARDLVESIGGSISA 282
Cdd:cd16953 35 TISVEDEGPGIPQEKLESIFDRFYTERPANEAfgqhSGLGLSISRQIIEAHGGISVA 91
|
|
| HATPase_PhoQ-like |
cd16954 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
179-285 |
3.50e-05 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG; This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. PhoQ is the histidine kinase (HK) of the PhoP-PhoQ two-component regulatory system (TCS), which responds to the levels of Mg2+ and Ca2+, controls virulence, mediates the adaptation to Mg2+-limiting environments, and regulates numerous cellular activities. Providencia stuartii AarG is a putative sensor kinase which controls the expression of the 2'-N-acetyltransferase and an intrinsic multiple antibiotic resistance (Mar) response in Providencia stuartii. The AarG product is similar to PhoQ in that it is able to restore wild-type levels of resistance to a Salmonella typhimurium phoQ mutant. However, the expression of the 2'-N-acetyltransferase gene and of aarP (a gene encoding a transcriptional activator of 2'-N-acetyltransferase) are not significantly affected by the levels of Mg2+ or Ca2+. Most proteins in this group contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have an accessory HAMP sensor domain, and some have an intracellular membrane -interaction PhoQ sensor domain.
Pssm-ID: 340430 [Multi-domain] Cd Length: 135 Bit Score: 42.62 E-value: 3.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 179 SRGITPSTSFPSspvivncDRKTLMRIFDNIFSNVAKYATSSLSVTLSSSR---VVTITNDAPSLTPVQVSKMFDKYYTV 255
Cdd:cd16954 22 SLDISPELRFPG-------ERNDLMELLGNLLDNACKWCLEFVEVTARQTDgglHLIVDDDGPGVPESQRSKIFQRGQRL 94
|
90 100 110
....*....|....*....|....*....|
gi 1079631860 256 NDGKESTGLGLSIARDLVESIGGSISASVS 285
Cdd:cd16954 95 DEQRPGQGLGLAIAKEIVEQYGGELSLSDS 124
|
|
| HATPase_SpaK_NisK-like |
cd16975 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
198-281 |
4.15e-05 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis SpaK and Lactococcus lactis NisK; This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Bacillus subtilis SpaK and Lactococcus lactis NisK. SpaK is the histidine kinase (HK) of the SpaK-SpaR two-component regulatory system (TCS), which is involved in the regulation of the biosynthesis of lantibiotic subtilin. NisK is the HK of the NisK-NisR TCS, which is involved in the regulation of the biosynthesis of lantibiotic nisin. SpaK and NisK may function as membrane-associated protein kinases that phosphorylate SpaR and NisR, respectively, in response to environmental signals.
Pssm-ID: 340434 [Multi-domain] Cd Length: 107 Bit Score: 42.06 E-value: 4.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 198 DRKTLMRIFDNIFSNVAKYATSSLSVTlsssrvVTITNDAPSLTPV-----------QVSKMFDKYY---TVNDGKESTG 263
Cdd:cd16975 1 DTLLLSRALINIISNACQYAPEGGTVS------ISIYDEEEYLYFEiwdnghgfseqDLKKALELFYrddTSRRSGGHYG 74
|
90
....*....|....*...
gi 1079631860 264 LGLSIARDLVESIGGSIS 281
Cdd:cd16975 75 MGLYIAKNLVEKHGGSLI 92
|
|
| PRK09835 |
PRK09835 |
Cu(+)/Ag(+) sensor histidine kinase; |
9-283 |
4.28e-05 |
|
Cu(+)/Ag(+) sensor histidine kinase;
Pssm-ID: 182101 [Multi-domain] Cd Length: 482 Bit Score: 44.76 E-value: 4.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 9 VIFVAIITVLVIKIVLLS-----RAFTEIDDQVRDhmdgsdsssfkLSTSNPKARSLANNLDAELQQL-----HK-ERIv 77
Cdd:PRK09835 188 IMTASVISLLIVFIVLLAvhkghAPIRSVSRQIQN-----------ITSKDLDVRLDPQTVPIELEQLvlsfnHMiERI- 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 78 lQDGDRRmKANVTA-ISHDLRTPLTAINSYVDL-LSTEPDEAKRAEYLERIKDRTSELKYMTSELFkYSVSSDNsyeSRL 155
Cdd:PRK09835 256 -EDVFTR-QSNFSAdIAHEIRTPITNLITQTEIaLSQSRSQKELEDVLYSNLEELTRMAKMVSDML-FLAQADN---NQL 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 156 NPED--LDLQRIIEdSLLSFFGELSS-RGITpsTSFPSSPVIVNCDRKTLMRIFDNIFSNVAKY-----ATSSLSVTLSS 227
Cdd:PRK09835 330 IPEKkmLDLADEVG-KVFDFFEAWAEeRGVE--LRFVGDPCQVAGDPLMLRRAISNLLSNALRYtpageAITVRCQEVDH 406
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 228 SRVVTITNDAPSLTPVQVSKMFDKYYTVNDGK----ESTGLGLSIARDLVESIGGSISAS 283
Cdd:PRK09835 407 QVQLVVENPGTPIAPEHLPRLFDRFYRVDPSRqrkgEGSGIGLAIVKSIVVAHKGTVAVT 466
|
|
| HATPase_TmoS-FixL-DctS-like |
cd16920 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
231-283 |
5.26e-05 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Rhizobium meliloti FixL, and Rhodobacter capsulatus DctS; includes hybrid sensor histidine kinase similar to Pseudomonas mendocina TmoS; This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs), such as Pseudomonas mendocina TmoS HK of the TmoS-TmoT TCS, which controls the expression of the toluene-4-monooxygenase pathway, Rhizobium meliloti FixL HK of the FixL-FixJ TCS, which regulates the expression of the genes related to nitrogen fixation in the root nodule in response to O(2) levels, and Rhodobacter capsulatus DctS of the DctS-DctR TCS, which controls synthesis of the high-affinity C4-dicarboxylate transport system. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and PAS sensor domain(s); many are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340397 [Multi-domain] Cd Length: 104 Bit Score: 41.61 E-value: 5.26e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 1079631860 231 VTITNDAPSLTPVQVSKMFDKYYTVNdgKESTGLGLSIARDLVESIGGSISAS 283
Cdd:cd16920 40 ISVKDTGPGIAEEVAGQLFDPFYTTK--SEGLGMGLSICRSIIEAHGGRLSVE 90
|
|
| HATPase_AtoS-like |
cd16943 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
242-283 |
7.13e-05 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli K-12 AtoS; This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs) such as Escherichia coli AtoS, an HK of the AtoS-AtoC TCS. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have accessory domains such as HAMP or PAS sensor domains or CBS-pair domains.
Pssm-ID: 340419 [Multi-domain] Cd Length: 105 Bit Score: 41.25 E-value: 7.13e-05
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1079631860 242 PVQVSKMFDKYYTVNDGKESTGLGLSIARDLVESIGGSISAS 283
Cdd:cd16943 49 PEILGRIFDPFFTTKPVGEGTGLGLSLSYRIIQKHGGTIRVA 90
|
|
| HATPase_HupT_MifS-like |
cd16976 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
230-281 |
2.39e-04 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Rhodobacter capsulatus HupT and Pseudomonas aeruginosa MifS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Rhodobacter capsulatus HupT of the HupT-HupR two-component regulatory system (TCS), which regulates the synthesis of HupSL, a membrane bound [NiFe]hydrogenase. It also contains the HATPase domain of Pseudomonas aeruginosa MifS, the HK of the MifS-MifR TCS, which may be involved in sensing alpha-ketoglutarate and regulating its transport and subsequent metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some also have a C-terminal PAS sensor domain.
Pssm-ID: 340435 [Multi-domain] Cd Length: 102 Bit Score: 39.75 E-value: 2.39e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1079631860 230 VVTITNDAPSLTPVQVSKMFDKYYTVNDGKESTGLGLSIARDLVESIGGSIS 281
Cdd:cd16976 36 VLVVRDNGPGIAEEHLSRVFDPFFTTKPVGKGTGLGLSISYGIVEEHGGRLS 87
|
|
| HATPase_EnvZ-like |
cd16950 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
202-287 |
3.35e-04 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli EnvZ and Pseudomonas aeruginosa BfmS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Escherichia coli EnvZ of the EnvZ-OmpR two-component regulatory system (TCS), which functions in osmoregulation. It also contains the HATPase domain of Pseudomonas aeruginosa BfmS, the HK of the BfmSR TCS, which functions in the regulation of the rhl quorum-sensing system and bacterial virulence in P. aeruginosa. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also contain a periplasmic domain.
Pssm-ID: 340426 [Multi-domain] Cd Length: 101 Bit Score: 39.35 E-value: 3.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 202 LMRIFDNIFSNVAKYAT---SSLSVTLSSSRVVTITNDAPSLTPVQVSKMFDKYYTVNDGKES--TGLGLSIARDLVESI 276
Cdd:cd16950 1 LKRVLSNLVDNALRYGGgwvEVSSDGEGNRTRIQVLDNGPGIAPEEVDELFQPFYRGDNARGTsgTGLGLAIVQRISDAH 80
|
90
....*....|.
gi 1079631860 277 GGSISASVSDG 287
Cdd:cd16950 81 GGSLTLANRAG 91
|
|
| PRK11091 |
PRK11091 |
aerobic respiration control sensor protein ArcB; Provisional |
244-290 |
3.96e-04 |
|
aerobic respiration control sensor protein ArcB; Provisional
Pssm-ID: 236842 [Multi-domain] Cd Length: 779 Bit Score: 41.85 E-value: 3.96e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1079631860 244 QVSKMFDKYYTVNDGKES-----TGLGLSIARDLVESIGGSISASVSDGFLS 290
Cdd:PRK11091 446 ELDKIFAMYYQVKDSHGGkpatgTGIGLAVSKRLAQAMGGDITVTSEEGKGS 497
|
|
| PRK10815 |
PRK10815 |
two-component system sensor histidine kinase PhoQ; |
58-285 |
5.43e-04 |
|
two-component system sensor histidine kinase PhoQ;
Pssm-ID: 182754 [Multi-domain] Cd Length: 485 Bit Score: 41.16 E-value: 5.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 58 RSLANNL----DAELQQLHKERIVLQDgdrrmkanvtaISHDLRTPLTAINSYVDLLSTEPD-EAKRAE--YLERIKDRT 130
Cdd:PRK10815 246 TSLVRNLnrllKNERERYTKYRTTLTD-----------LTHSLKTPLAVLQSTLRSLRSGKQmSVEQAEpiMLEQISRIS 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 131 SELKYMtseLFKYSVSSDNSYESRlnpeDLDLQRIIEDSLLSFFGELSSR-------GITPSTSFPSspvivncDRKTLM 203
Cdd:PRK10815 315 QQIGYY---LHRASMRSEHNLLSR----ELHSVAPLLDNLTSALNKVYQRkgvnitlDISPEITFVG-------EKNDFM 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 204 RIFDNIFSNVAKYA---TSSLSVTLSSSRVVTITNDAPSLTPVQVSKMFDKYYTVNDGKESTGLGLSIARDLVESIGGSI 280
Cdd:PRK10815 381 EVMGNVLDNACKYClefVEISARQTDEHLHIVVEDDGPGIPESKRELIFDRGQRADTLRPGQGLGLSVAREITEQYEGKI 460
|
....*
gi 1079631860 281 SASVS 285
Cdd:PRK10815 461 SAGDS 465
|
|
| PRK10604 |
PRK10604 |
sensor protein RstB; Provisional |
91-286 |
8.62e-04 |
|
sensor protein RstB; Provisional
Pssm-ID: 236724 [Multi-domain] Cd Length: 433 Bit Score: 40.36 E-value: 8.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 91 AISHDLRTPLTAINsYVDLLSTEPDEAKRAEyLERikdRTSELKYMTSELFKYSvSSDNSyESRLNPEDLDLQRIIEDSL 170
Cdd:PRK10604 218 GIAHELRTPLVRLR-YRLEMSDNLSAAESQA-LNR---DIGQLEALIEELLTYA-RLDRP-QNELHLSEPDLPAWLSTHL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 171 LSFfgelssRGITPSTSF----PSSPVIVNCDRKTLMRIFDNIFSNVAKYATSSLSVTLSSSR---VVTITNDAPSLTPV 243
Cdd:PRK10604 291 ADI------QAVTPEKTVrldtPHQGDYGALDMRLMERVLDNLLNNALRYAHSRVRVSLLLDGnqaCLIVEDDGPGIPPE 364
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1079631860 244 QVSKMFDKYYTVNDGKE-ST---GLGLSIARDLVESIGGSISASVSD 286
Cdd:PRK10604 365 ERERVFEPFVRLDPSRDrATggcGLGLAIVHSIALAMGGSVNCDESE 411
|
|
| HATPase_TutC-TodS-like |
cd16925 |
Histidine kinase-like ATPase domain of hybrid sensor histidine kinases similar to Pseudomonas ... |
231-283 |
9.92e-04 |
|
Histidine kinase-like ATPase domain of hybrid sensor histidine kinases similar to Pseudomonas putida TodS and Thauera aromatica TutC; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinase (HKs) such Pseudomonas putida TodS HK of the TodS-TodT two-component regulatory system (TCS) which controls the expression of a toluene degradation pathway. Thauera aromatica TutC may be part of a TCS that is involved in anaerobic toluene metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), PAS sensor domain(s) and a REC domain.
Pssm-ID: 340402 [Multi-domain] Cd Length: 110 Bit Score: 38.24 E-value: 9.92e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 1079631860 231 VTITNDAPSLTPVQVSKMFDKYYTVNDGKE----STGLGLSIARDLVESIGGSISAS 283
Cdd:cd16925 40 LTVSDSGPGIPPNLREEIFERFRQGDGSSTrahgGTGLGLSIVKEFVELHGGTVTVS 96
|
|
| HATPase_EvgS-ArcB-TorS-like |
cd16922 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases, many are hybrid ... |
240-287 |
1.72e-03 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases, many are hybrid sensor histidine kinases, similar to Escherichia coli EvgS, ArcB, TorS, BarA, RcsC; This family contains the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinases (HKs), including the following Escherichia coli HKs: EvgS, a HK of the EvgS-EvgA two-component system (TCS) that confers acid resistance; ArcB, a HK of the ArcB-ArcA TCS that modulates the expression of numerous genes in response to respiratory growth conditions; TorS, a HK of the TorS-TorR TCS which is involved in the anaerobic utilization of trimethylamine-N-oxide; BarA, a HK of the BarA-UvrY TCS involved in the regulation of carbon metabolism; and RcsC, a HK of the RcsB-RcsC TCS which regulates the expression of the capsule operon and of the cell division gene ftsZ. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), with most having accessory sensor domain(s) such as GAF, PAS and CHASE; many are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340399 [Multi-domain] Cd Length: 110 Bit Score: 37.47 E-value: 1.72e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 1079631860 240 LTPVQVSKMFDKYYTVnDGKES-----TGLGLSIARDLVESIGGSISASVSDG 287
Cdd:cd16922 48 IPEEQQARLFEPFSQA-DSSTTrkyggTGLGLAISKKLVELMGGDISVESEPG 99
|
|
| PRK10337 |
PRK10337 |
sensor protein QseC; Provisional |
94-270 |
2.25e-03 |
|
sensor protein QseC; Provisional
Pssm-ID: 182388 [Multi-domain] Cd Length: 449 Bit Score: 39.25 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 94 HDLRTPLTA--INSYVDLLSTEpDEAKRAEYLERIK---DRTSELkymTSELFKYSvssdnSYESRLNPEDL---DLQRI 165
Cdd:PRK10337 246 HELRSPLAAlkVQTEVAQLSDD-DPQARKKALLQLHagiDRATRL---VDQLLTLS-----RLDSLDNLQDVaeiPLEDL 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 166 IEDSLLSFFGELSSRGITPSTSFPSSPVIVNCDRKTLMRIFDNIFSNVAKYATS-SLSVTLSSSRVVTITNDAPSLTPVQ 244
Cdd:PRK10337 317 LQSAVMDIYHTAQQAGIDVRLTLNAHPVIRTGQPLLLSLLVRNLLDNAIRYSPQgSVVDVTLNARNFTVRDNGPGVTPEA 396
|
170 180
....*....|....*....|....*...
gi 1079631860 245 VSKMFDKYYTvNDGKEST--GLGLSIAR 270
Cdd:PRK10337 397 LARIGERFYR-PPGQEATgsGLGLSIVR 423
|
|
| HATPase_CreC-like |
cd16945 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
231-290 |
2.85e-03 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli CreC; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Escherichia coli CreC of the CreC-CreB two-component regulatory system (TCS) involved in catabolic regulation. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and accessory sensory domain(s) such as HAMP, CACHE or PAS.
Pssm-ID: 340421 [Multi-domain] Cd Length: 106 Bit Score: 36.67 E-value: 2.85e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1079631860 231 VTITNDAPSLTPVQVSKMFDKYYTV---NDGKESTGLGLSIARDLVESIGGSIS-ASVSDGFLS 290
Cdd:cd16945 39 LLVFDEGSGIPDYALNRVFERFYSLprpHSGQKSTGLGLAFVQEVAQLHGGRITlRNRPDGVLA 102
|
|
| HATPase_BceS-YxdK-YvcQ-like |
cd16948 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
198-287 |
3.21e-03 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.
Pssm-ID: 340424 [Multi-domain] Cd Length: 109 Bit Score: 36.49 E-value: 3.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 198 DRKTLMRIFDNIFSNVAKYATSSLSVTLSSSR-----VVTITNDAPSLTPVQVSKMFDKYYTVNDG---KESTGLGLSIA 269
Cdd:cd16948 2 DAKWLSFIIGQIVSNALKYSKQGGKIEIYSETneqgvVLSIKDFGIGIPEEDLPRVFDKGFTGENGrnfQESTGMGLYLV 81
|
90
....*....|....*...
gi 1079631860 270 RDLVESIGGSISASVSDG 287
Cdd:cd16948 82 KKLCDKLGHKIDVESEVG 99
|
|
| COG4192 |
COG4192 |
Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal ... |
67-287 |
8.67e-03 |
|
Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms];
Pssm-ID: 443346 [Multi-domain] Cd Length: 640 Bit Score: 37.74 E-value: 8.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 67 ELQQLHKERIVLQdgdrrmkaNVTAISHDLRTPLTAINSYV----DLLSTEPDEAKRaEYLERIKDRTSELKYMTSELFK 142
Cdd:COG4192 423 ELIQAAKMAVVGQ--------TMTSLAHELNQPLNAMSMYLfsakKALEQENYAQLP-TSLDKIEGLIERMDKIIKSLRQ 493
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079631860 143 YSVSSDNSYESrlnpedLDLQRIIEDSLLSFfgELSSRGITPSTSFPSSPViVNCDRKTLMRIFDNIFSN----VAKYAT 218
Cdd:COG4192 494 FSRKSDTPLQP------VDLRQVIEQAWELV--ESRAKPQQITLHIPDDLM-VQGDQVLLEQVLVNLLVNaldaVATQPQ 564
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1079631860 219 SSLSVTLSSSRVVTITNDAPSLTPVqVSKMFDKYYTvndGKE-STGLGLSIARDLVESIGGSIS-ASVSDG 287
Cdd:COG4192 565 ISVDLLSNAENLRVAISDNGNGWPL-VDKLFTPFTT---TKEvGLGLGLSICRSIMQQFGGDLYlASTLER 631
|
|
| |
