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Conserved domains on  [gi|1437703015|emb|STX33281|]
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putative endonuclease distantly related to archaeal Holliday junction resolvase [Legionella birminghamensis]

Protein Classification

YraN family protein( domain architecture ID 10013993)

YraN family protein is a predicted endonuclease of the the PDDEXK nuclease superfamily

CATH:  3.40.960.10
Gene Ontology:  GO:0003677|GO:0004519
PubMed:  16011798|15972856
SCOP:  3000104

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK12497 PRK12497
YraN family protein;
4-116 4.74e-50

YraN family protein;


:

Pssm-ID: 237119  Cd Length: 119  Bit Score: 154.57  E-value: 4.74e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   4 AFGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLL 83
Cdd:PRK12497    7 QLGAAGEDLAARYLESKGLRILARNFRCRFGEIDLIARDGDTLVFVEVKTRRSDRFGGAAEAVTPRKQRRLRRAAQLWLA 86

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1437703015  84 AKKLQDKCAARFDVVLFEGKQLEIEWIKNAFDS 116
Cdd:PRK12497   87 RHPSLADLPCRFDVVAIGGPGPEIEHIKNAFDA 119
 
Name Accession Description Interval E-value
PRK12497 PRK12497
YraN family protein;
4-116 4.74e-50

YraN family protein;


Pssm-ID: 237119  Cd Length: 119  Bit Score: 154.57  E-value: 4.74e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   4 AFGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLL 83
Cdd:PRK12497    7 QLGAAGEDLAARYLESKGLRILARNFRCRFGEIDLIARDGDTLVFVEVKTRRSDRFGGAAEAVTPRKQRRLRRAAQLWLA 86

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1437703015  84 AKKLQDKCAARFDVVLFEGKQLEIEWIKNAFDS 116
Cdd:PRK12497   87 RHPSLADLPCRFDVVAIGGPGPEIEHIKNAFDA 119
YraN COG0792
Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 ...
 4-115 1.91e-49

Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family [Replication, recombination and repair];


Pssm-ID: 440555  Cd Length: 116  Bit Score: 152.98  E-value: 1.91e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   4 AFGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLL 83
Cdd:COG0792     4 ELGRRGEDLAARYLERKGYRILARNWRCRGGEIDLIARDGDTLVFVEVKTRRSARFGGPAEAVTPRKQRRLRRAAEAYLA 83

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1437703015  84 AKKLQDKCAARFDVVLFEGKQLEIEWIKNAFD 115
Cdd:COG0792    84 RHPGLADLPVRFDVVAVTGDGREIEHIENAFD 115
UPF0102 pfam02021
Uncharacterized protein family UPF0102; The function of this family is unknown.
 10-100 1.07e-40

Uncharacterized protein family UPF0102; The function of this family is unknown.


Pssm-ID: 460416 [Multi-domain]  Cd Length: 92  Bit Score: 130.21  E-value: 1.07e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015  10 EQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLLAKKLQD 89
Cdd:pfam02021   2 EDLAARYLEAKGYRILARNWRCRFGEIDIIARDGDTLVFVEVKTRSSTRFGSPAEAVTPRKQRRLRRAAAAYLAEHPLYA 81

                          90
                  ....*....|.
gi 1437703015  90 KCAARFDVVLF 100
Cdd:pfam02021  82 DLPCRFDVIAV 92
TIGR00252 TIGR00252
TIGR00252 family protein; the scores for Mycobacterium tuberculosis and Treponema pallidum are ...
 6-115 6.67e-32

TIGR00252 family protein; the scores for Mycobacterium tuberculosis and Treponema pallidum are low considering the alignment [Hypothetical proteins, Conserved]


Pssm-ID: 129354  Cd Length: 119  Bit Score: 108.84  E-value: 6.67e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   6 GKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLLAK 85
Cdd:TIGR00252   9 GQAGESQARAWLEQKGLKFIAANWNSPWGEIDLIMHDTKTIAFVEVRTRSGGNYGGALLSVNARKQEKILQTANLWLASQ 88

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1437703015  86 KLQ-DKCAARFDVVLFEGKQLEIEWIKNAFD 115
Cdd:TIGR00252  89 NPSwSDWNCRFDVMAFFPTGENAEWIFANLP 119
PoNe_Nuclease cd20736
Polymorphic Nuclease effector (PoNe) co-occurring with an N-terminal nuclease domain; The ...
 5-82 1.27e-19

Polymorphic Nuclease effector (PoNe) co-occurring with an N-terminal nuclease domain; The DNase toxin domain called PoNe (Polymorphic Nuclease effector) belongs to a diverse superfamily of PD-(D/E)xK phosphodiesterases, and is associated with several toxin delivery systems including type V, type VI, and type VII. PoNe toxicity is antagonized by cognate immunity proteins (PoNi) containing DUF1911 and DUF1910 domains. This subfamily contains proteins with PoNe domains that typically co-occur with nuclease N-terminal domains such as endonucleases involved in methyl-directed DNA mismatch repair in gram negative bacteria.


Pssm-ID: 410645 [Multi-domain]  Cd Length: 80  Bit Score: 76.12  E-value: 1.27e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   5 FGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMR--EGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYL 82
Cdd:cd20736     1 LGAWGEDIAARYLREKGYRILERNYRGGGGEIDLIARdpETGTIVFVEVKTRRSDKFGHPGEAVTRAKQRRLIKAALEYL 80
 
Name Accession Description Interval E-value
PRK12497 PRK12497
YraN family protein;
4-116 4.74e-50

YraN family protein;


Pssm-ID: 237119  Cd Length: 119  Bit Score: 154.57  E-value: 4.74e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   4 AFGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLL 83
Cdd:PRK12497    7 QLGAAGEDLAARYLESKGLRILARNFRCRFGEIDLIARDGDTLVFVEVKTRRSDRFGGAAEAVTPRKQRRLRRAAQLWLA 86

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1437703015  84 AKKLQDKCAARFDVVLFEGKQLEIEWIKNAFDS 116
Cdd:PRK12497   87 RHPSLADLPCRFDVVAIGGPGPEIEHIKNAFDA 119
YraN COG0792
Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 ...
 4-115 1.91e-49

Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family [Replication, recombination and repair];


Pssm-ID: 440555  Cd Length: 116  Bit Score: 152.98  E-value: 1.91e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   4 AFGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLL 83
Cdd:COG0792     4 ELGRRGEDLAARYLERKGYRILARNWRCRGGEIDLIARDGDTLVFVEVKTRRSARFGGPAEAVTPRKQRRLRRAAEAYLA 83

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1437703015  84 AKKLQDKCAARFDVVLFEGKQLEIEWIKNAFD 115
Cdd:COG0792    84 RHPGLADLPVRFDVVAVTGDGREIEHIENAFD 115
PRK14673 PRK14673
hypothetical protein; Provisional
 6-115 4.39e-43

hypothetical protein; Provisional


Pssm-ID: 237786  Cd Length: 137  Bit Score: 137.50  E-value: 4.39e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   6 GKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMRE--GlTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLL 83
Cdd:PRK14673   29 GAAFEDRALAFLQRAGLALVARNYRCRGGEIDLVMRErdG-TLVFVEVRARASRRFGGAAASIGARKQRRLVAAALHFLA 107

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1437703015  84 akKLQDKCAARFDVVLFEGKQLeiEWIKNAFD 115
Cdd:PRK14673  108 --RHGGAPACRFDVVAFEGGRL--EWLRDAFR 135
UPF0102 pfam02021
Uncharacterized protein family UPF0102; The function of this family is unknown.
 10-100 1.07e-40

Uncharacterized protein family UPF0102; The function of this family is unknown.


Pssm-ID: 460416 [Multi-domain]  Cd Length: 92  Bit Score: 130.21  E-value: 1.07e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015  10 EQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLLAKKLQD 89
Cdd:pfam02021   2 EDLAARYLEAKGYRILARNWRCRFGEIDIIARDGDTLVFVEVKTRSSTRFGSPAEAVTPRKQRRLRRAAAAYLAEHPLYA 81

                          90
                  ....*....|.
gi 1437703015  90 KCAARFDVVLF 100
Cdd:pfam02021  82 DLPCRFDVIAV 92
TIGR00252 TIGR00252
TIGR00252 family protein; the scores for Mycobacterium tuberculosis and Treponema pallidum are ...
 6-115 6.67e-32

TIGR00252 family protein; the scores for Mycobacterium tuberculosis and Treponema pallidum are low considering the alignment [Hypothetical proteins, Conserved]


Pssm-ID: 129354  Cd Length: 119  Bit Score: 108.84  E-value: 6.67e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   6 GKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLLAK 85
Cdd:TIGR00252   9 GQAGESQARAWLEQKGLKFIAANWNSPWGEIDLIMHDTKTIAFVEVRTRSGGNYGGALLSVNARKQEKILQTANLWLASQ 88

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1437703015  86 KLQ-DKCAARFDVVLFEGKQLEIEWIKNAFD 115
Cdd:TIGR00252  89 NPSwSDWNCRFDVMAFFPTGENAEWIFANLP 119
PRK14675 PRK14675
hypothetical protein; Provisional
 6-118 1.42e-31

hypothetical protein; Provisional


Pssm-ID: 173138  Cd Length: 125  Bit Score: 108.00  E-value: 1.42e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   6 GKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLLAK 85
Cdd:PRK14675   11 GEIGESIAVTYLKGLRYKIVERNFRCRCGEIDIIARDGKTLVFVEVKTRKNYAYGVPQLAVTPFKQRQISKAALTWLAKK 90

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1437703015  86 KLQDKCaARFDVV--LFEGKQL-EIEWIKNAFDSYY 118
Cdd:PRK14675   91 KLLDAE-ARFDVIaiTQRDHAVpEIEHIKNAFELAY 125
PRK14680 PRK14680
hypothetical protein; Provisional
 2-117 4.22e-24

hypothetical protein; Provisional


Pssm-ID: 173143  Cd Length: 134  Bit Score: 89.51  E-value: 4.22e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   2 SVAFGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYY 81
Cdd:PRK14680    5 RHAIGQHGEDAAAALLQRTGHRILARNWRHGGLELDIVCEDGDTIVFVEVKTRAAHGLTSPTDALTHSKRHRLIRAARAW 84

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1437703015  82 LLAKKLQDKcAARFDV--VLFEGKQLEIEWIKNAFDSY 117
Cdd:PRK14680   85 LAAHDAWDK-PCRFDLvcVTQRGATLTLEHYTHAFDLT 121
PRK14687 PRK14687
hypothetical protein; Provisional
 6-100 2.79e-22

hypothetical protein; Provisional


Pssm-ID: 237788  Cd Length: 173  Bit Score: 85.84  E-value: 2.79e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   6 GKQLEQRAVTFLSRQGLQLLESNFQ-CRWGEIDLIMREG----LTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANY 80
Cdd:PRK14687   33 GGGFEQLACEFLQEQGLILIARNWQqPKVGELDLVMLEKgqawSTLVFAEVRQRKLSGFGDAAASVTAGKQRKIIKTARY 112

                          90       100
                  ....*....|....*....|
gi 1437703015  81 YLLAKKLQDKCAARFDVVLF 100
Cdd:PRK14687  113 FLRQHPEYADYECRFDVIAY 132
PRK14674 PRK14674
hypothetical protein; Provisional
 5-114 6.07e-22

hypothetical protein; Provisional


Pssm-ID: 184788  Cd Length: 133  Bit Score: 83.87  E-value: 6.07e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   5 FGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLLA 84
Cdd:PRK14674    7 LGQWAEQTALKLLKEQNYEWVASNYHSRRGEVDLIVKRGNELIFVEVKARGQGNYGQACEMVTLSKQKKIIKTAMRFLQR 86

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1437703015  85 KKLQDKCAARFDVVLFEGKQ--------------LEIEWIKNAF 114
Cdd:PRK14674   87 YPSYQDFYCRFDVICFDFPQkiaktvqqdfskfhYDLQWIENAF 130
PRK14684 PRK14684
hypothetical protein; Provisional
 1-118 7.34e-22

hypothetical protein; Provisional


Pssm-ID: 173147  Cd Length: 120  Bit Score: 83.16  E-value: 7.34e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   1 MSVAFGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANY 80
Cdd:PRK14684    4 LTQKIGFNAEKTACRYLQKQGLSFITKNFRYKQGEIDLIMSDQSMLVFIEVRYRRFSDFIHPVATVTPLKQRRLIKTALH 83

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1437703015  81 YLLAKKLQDKCAARFDVVLFEGKQlEIEWIKNAFDSYY 118
Cdd:PRK14684   84 YLQKHRLLDKISCRFDIVGITADR-QITWIKNAIEVEY 120
PRK14685 PRK14685
hypothetical protein; Provisional
 6-114 1.66e-21

hypothetical protein; Provisional


Pssm-ID: 173148  Cd Length: 177  Bit Score: 84.06  E-value: 1.66e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   6 GKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLLAK 85
Cdd:PRK14685   45 GQAYESAALRWLARQGLRPLARNLRCRAGEIDLAMRDGEVLVLVEVRARAHAGYGGAAASIGASKQGRLARAAALLLPVL 124

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1437703015  86 KLQDKCAA----RFDVVLFEGKQleIEWIKNAF 114
Cdd:PRK14685  125 LRRHWPGApppvRFDVVAFEAGR--PHWLRGAF 155
PoNe_Nuclease cd20736
Polymorphic Nuclease effector (PoNe) co-occurring with an N-terminal nuclease domain; The ...
 5-82 1.27e-19

Polymorphic Nuclease effector (PoNe) co-occurring with an N-terminal nuclease domain; The DNase toxin domain called PoNe (Polymorphic Nuclease effector) belongs to a diverse superfamily of PD-(D/E)xK phosphodiesterases, and is associated with several toxin delivery systems including type V, type VI, and type VII. PoNe toxicity is antagonized by cognate immunity proteins (PoNi) containing DUF1911 and DUF1910 domains. This subfamily contains proteins with PoNe domains that typically co-occur with nuclease N-terminal domains such as endonucleases involved in methyl-directed DNA mismatch repair in gram negative bacteria.


Pssm-ID: 410645 [Multi-domain]  Cd Length: 80  Bit Score: 76.12  E-value: 1.27e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   5 FGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMR--EGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYL 82
Cdd:cd20736     1 LGAWGEDIAARYLREKGYRILERNYRGGGGEIDLIARdpETGTIVFVEVKTRRSDKFGHPGEAVTRAKQRRLIKAALEYL 80
PRK14682 PRK14682
hypothetical protein; Provisional
 2-114 2.44e-19

hypothetical protein; Provisional


Pssm-ID: 173145  Cd Length: 117  Bit Score: 76.63  E-value: 2.44e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   2 SVAFGKQLEQRAVTFLSRQGLQLLESNFQC-RWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANY 80
Cdd:PRK14682    3 TIEIGNKAELQACKFLHTQALEILAHNFKAlPYGEIDIIALDKDTLVFIEVKYRSKTKFAQAEEMLTYSKQQKLVNSASI 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1437703015  81 YLLAKKLQDKCAARFDVVLFegKQLEIEWIKNAF 114
Cdd:PRK14682   83 YLQHNPQYQDYQCRFDLIAI--NESNINWIKNAF 114
PRK14678 PRK14678
hypothetical protein; Provisional
 10-98 3.63e-18

hypothetical protein; Provisional


Pssm-ID: 173141  Cd Length: 120  Bit Score: 73.76  E-value: 3.63e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015  10 EQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEyggAIASITAAKRRKLTKTANYYLLAKKLQD 89
Cdd:PRK14678   13 EQVAAAYLERCGYTIIARNWRCRAGEIDIVAREGDQLVFVEVRTRRDQD---ALESITLAKRQRLVALAYHYLAAHDLPA 89


                  ....*....
gi 1437703015  90 KCAARFDVV 98
Cdd:PRK14678   90 TTPWRIDVI 98
PRK14689 PRK14689
hypothetical protein; Provisional
 2-82 1.83e-17

hypothetical protein; Provisional


Pssm-ID: 173152  Cd Length: 124  Bit Score: 72.07  E-value: 1.83e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   2 SVAFGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEY-GGAIASITAAKRRKLTKTANY 80
Cdd:PRK14689    7 SQALGAWAEERVLRLLQRRGWRLLDRNWSCRWGELDLVLEKQQRLLVVEVKGRRRRGLdGWGLAAFHPRKRRRLARAINC 86


                  ..
gi 1437703015  81 YL 82
Cdd:PRK14689   87 WR 88
PRK14681 PRK14681
hypothetical protein; Provisional
 5-114 3.72e-17

hypothetical protein; Provisional


Pssm-ID: 237787  Cd Length: 158  Bit Score: 72.26  E-value: 3.72e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   5 FGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMR-EGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLL 83
Cdd:PRK14681   45 IGALGEQYAAAWLEEHGWTTLSRNWHCRYGELDIVALnPEYTIVFVEVKTRRSMHYGYPQEAVTAAKQHNLRKAACDWLL 124

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1437703015  84 AKKLQ-DKCAARFDV--VLFEGKQLEIEWIKNAF 114
Cdd:PRK14681  125 ERRNRvPHIGVRFDVvtVVVRVGRPLVHHIENAF 158
PRK14686 PRK14686
hypothetical protein; Provisional
 6-114 4.56e-17

hypothetical protein; Provisional


Pssm-ID: 184791  Cd Length: 119  Bit Score: 70.95  E-value: 4.56e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   6 GKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYllAK 85
Cdd:PRK14686    8 GKEGEDLAVEFLIKKGYTILERNYRFQKAEIDIIAQKGNILVIVEVKTRSSSDFGNPQDFVKPKKIQLLVKAVNHY--IE 85

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1437703015  86 KLQDKCAARFDVVLF--EGKQLEIEWIKNAF 114
Cdd:PRK14686   86 DKDLDVEIRFDIIAIvkNKAGFKIEHIEDAF 116
PRK14677 PRK14677
hypothetical protein; Provisional
 7-106 1.06e-11

hypothetical protein; Provisional


Pssm-ID: 184789  Cd Length: 107  Bit Score: 56.84  E-value: 1.06e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   7 KQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVraRSSSEYGGAIASITAAKRRKLTKTANYYLLAKK 86
Cdd:PRK14677    4 KEAEELACKFLKKKGYKILERNYRTKYGEIDIVARDGREIVFVEV--KSGSGKVDPLERIDLKKVRNLEQTARFYMIQNK 81

                          90       100
                  ....*....|....*....|
gi 1437703015  87 LqdKCAARFDVVLFEGKQLE 106
Cdd:PRK14677   82 L--KGPARVDFVRVTPEGID 99
PRK14676 PRK14676
hypothetical protein; Provisional
 6-114 3.08e-11

hypothetical protein; Provisional


Pssm-ID: 173139  Cd Length: 117  Bit Score: 55.72  E-value: 3.08e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   6 GKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVraRSSSEYGGAIASITAAKRRKLTKTANYYLLAK 85
Cdd:PRK14676   10 GQTAEEAVARIYDRSGRPVAARRWRGVSGEIDLIAREGAEVIFIEV--KKSKSHAAAAARLSRRQMDRIYGAASEFLAGE 87

                          90       100
                  ....*....|....*....|....*....
gi 1437703015  86 KLQDKCAARFDVVLFEGKQlEIEWIKNAF 114
Cdd:PRK14676   88 PRGQLTASRFDVALVDALG-RVEIIENAF 115
PRK14688 PRK14688
hypothetical protein; Provisional
 6-114 1.45e-10

hypothetical protein; Provisional


Pssm-ID: 184792  Cd Length: 121  Bit Score: 54.28  E-value: 1.45e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   6 GKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEYGGAIASITAAKRRKLTKTANYYLLAK 85
Cdd:PRK14688    9 GEFGEKLAAEYLKGMGYSIIQTNCRLPEGEIDIVGQDGEYLVFIEVRTKRRLGYGLPAESVTPRKKAHLMASAESYIQKH 88

                          90       100       110
                  ....*....|....*....|....*....|
gi 1437703015  86 KLQD-KCAARFDVVLFEGKQLEIEWIKNAF 114
Cdd:PRK14688   89 RLEHfPCRIDFVSVDLSQPEPRLELIKNAL 118
PRK14679 PRK14679
hypothetical protein; Provisional
 5-98 9.48e-10

hypothetical protein; Provisional


Pssm-ID: 173142  Cd Length: 128  Bit Score: 52.21  E-value: 9.48e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015   5 FGKQLEQRAVTFLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRARSSSEygGAIASITAAKRRKLTKTANYYLLA 84
Cdd:PRK14679   17 RGLSAEGLALLALMLKGYRPLARRFAAAGGEIDLIVRRGRTIAFVEVKARATLD--AAATAIDARKRARFSRAARAWLAR 94

                          90
                  ....*....|....
gi 1437703015  85 KKLQDKCAARFDVV 98
Cdd:PRK14679   95 HPLAAGATLRADAV 108
PRK14683 PRK14683
hypothetical protein; Provisional
 16-100 9.31e-06

hypothetical protein; Provisional


Pssm-ID: 173146  Cd Length: 122  Bit Score: 41.79  E-value: 9.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1437703015  16 FLSRQGLQLLESNFQCRWGEIDLIMREGLTLVFVEVRarsSSEYGGAIaSITAAKRRKLTKTANYYLLAKKLQDKCAARF 95
Cdd:PRK14683   26 FLKCKLYHIIKHRYRCPLGEIDIIAHKNKQLVFIEVK---TSLFNKNI-PITYKQQKSILKSAKYFIAFHRKFANYSIRF 101


                  ....*
gi 1437703015  96 DVVLF 100
Cdd:PRK14683  102 DLYFF 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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