|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 701.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 1 MLKILVPTMMLFPTIWLSPPKWLWTTTTLQSLTIALISLTWIKWSSETGWTSSNLYMGTDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 81 SQNHIKTEPLNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 161 LLVALLLLHQNLGTLSMLTIQYSHPMTLNSWGDKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 241 GYGMMRMMIILDPLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 321 GLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2201038916 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLMTLHLLPIILLITKPEIMWGWW 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 669.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 1 MLKILVPTMMLFPTIWLSPPKWLWTTTTLQSLTIALISLTWIKWSSETgWTSSNLYMGTDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 81 SQNHIKTEPLNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 161 LLVALLLLHQNLGTLSMLTIQYSHPMTLNSWGDKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 241 GYGMMRMMIILDPLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 321 GLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2201038916 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLMTLHLLPIILLITKPEIMWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 660.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 1 MLKILVPTMMLFPTIWLSPPKWLWTTTTLQSLTIALISLTWIKWSSETGwTSSNLYMGTDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 81 SQNHIKTEPLNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 161 LLVALLLLHQNLGTLSMLTIQYSHPMTLNSWGDKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 241 GYGMMRMMIILDPLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 321 GLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2201038916 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLMTLHLLPIILLITKPEIMWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 625.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 1 MLKILVPTMMLFPTIWLSPPKWLWTTTTLQSLTIALISLTWIKWSSETGWTSSNLYMgTDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFF-SDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 81 SQNHIKTEPLNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 161 LLVALLLLHQNLGTLSMLTIQYSHPMTLNSWGDKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 241 GYGMMRMMIILDPLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 321 GLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2201038916 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLMTLHLLPIILLITKPEIMWG 457
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILG 456
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 548.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 3 KILVPTMMLFPTIWLSPPKWLWTTTTLQSLTIALISLTWIKWSSETGWTSSNLYMGTDPLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 83 NHIKTEPLNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 163 VALLLLHQNLGTLSMLTIQYSHPMTlnsWGDKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLTT---WNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 243 GMMRMMIILDPLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 323 VSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2201038916 403 ITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLMTLHLLPIILLITKPEIM 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-439 |
1.17e-168 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 482.17 E-value: 1.17e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 1 MLKILVPTMMLFPTIWLSPPKWLWTTTTLQSLTIALISLTWIKWSSETGWTSSNLYMGTDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 81 SQNHIKTEPLNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 161 LLVALLLLHQNLGTLSMLTIQYSHPMTLNSWGDKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 241 GYGMMRMMIILD-PLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 320 HGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGA 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2201038916 400 GTLITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLMT 439
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIF 440
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-438 |
1.89e-124 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 368.01 E-value: 1.89e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 49 GWTSSNLYMGTDPLSTPLLVLTCWLLPLMILASQNHIKTepLNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 129 PTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSMLTIQYSHPMTLNSWgdkIWWAGCLIAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 209 PLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 289 YSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 369 ALPPLPNLMGELVIITAMFNWSPWTLALTGAGTLITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLM 438
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
7.39e-122 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 362.55 E-value: 7.39e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 1 MLKILVPTMMLFPTIWLSPPKWLwttttLQSLTIALISLTWIKWSSETGWTSSNLYMGTDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 81 SQNHIKTepLNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 161 LLVALLLLHQNLGTLSMltiqyshPMTLNSWGDKIWWAGCLI-AFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKL 239
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSF-------FLLNFFGSLNFLWYLSMIlAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 240 GGYGMMRMMIILDPLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIA 319
Cdd:MTH00163 227 GGYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIG 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 320 HGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGA 399
Cdd:MTH00163 307 HGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLML 386
|
410 420 430
....*....|....*....|....*....|....*....
gi 2201038916 400 GTLITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLM 438
Cdd:MTH00163 387 LSFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLL 425
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
1.25e-116 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 349.42 E-value: 1.25e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 1 MLKILVPTMMLFPtIWLSPPKWLWTTTTLQSLTIALISLTWIKWSSeTGWTSSNLYMGTDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLL-LPLIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 81 SQNHIKTEplNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 161 LLVALLLLHQNLGTLSMLTIQYSHPMTLNSwgdKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 241 GYGMMRMMIILDPLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 321 GLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2201038916 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLMTLHLLPIILLITKPEIMWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
28-418 |
8.11e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 329.25 E-value: 8.11e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 28 TLQSLTIALISLTWIKWSSETGWTSSNLYMGTDPLSTPLLVLTCWLLPLMILASQNHIKTEplNRQRSYITLLASLQTFL 107
Cdd:MTH00205 24 FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLLLIL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 108 IMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSMLtiqYSHPMT 187
Cdd:MTH00205 102 ILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMF---FNFPLN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 188 LNSWGDKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVYPIIALAL 267
Cdd:MTH00205 179 FSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 268 WGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLAR 347
Cdd:MTH00205 259 WGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNK 338
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2201038916 348 GLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGTLITAAYSLYLFLMTQRG 418
Cdd:MTH00205 339 GVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHG 409
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
9-438 |
6.13e-88 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 276.58 E-value: 6.13e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 9 MMLFPTIWLSPPKWLWTTTTLqsLTIALISLTWIKWSSETG---------WTSS---NLYMGTDPLSTPLLVLTCWLLPL 76
Cdd:COG1008 20 LLLLPRRNARLARWVALAVSL--LTLLLSLYLLAGFDPGTGgfqfvesypWIPSlgiSYHLGVDGISLPLVLLTALLTPL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 77 MILASQNHIKteplNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNqAERLSAGTYFLFYTLA 156
Cdd:COG1008 98 AILASWNEIK----KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLA 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 157 GSLPLLVALLLLHQNLG--TLSMLTIQYSH-PMTLNSWgdkiWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLA 233
Cdd:COG1008 173 GSLLMLVAILALYFLAGalTFDIAELAAAPlPLTAQLL----LFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLA 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 234 AILLKLGGYGMMRMMIILDPL-SKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTG 312
Cdd:COG1008 249 GVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 313 ALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPW 392
Cdd:COG1008 329 AVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPW 408
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2201038916 393 TLALTGAGTLITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLM 438
Cdd:COG1008 409 LAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVL 454
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
8-438 |
4.39e-86 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 272.08 E-value: 4.39e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 8 TMMLFPTIWLSP-----------------PKWLWTTTTLqsLTIALISLTWIKWSSETG---------WTSS---NLYMG 58
Cdd:PRK05846 2 NWPLLSLLIFLPliggllvllterfgarlARWIALIGTL--LTLLLSLVLWIGFDSSNAgfqfvekhpWIPRfgiSYHLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 59 TDPLSTPLLVLTCWLLPLMILASQNHIKteplNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWG 138
Cdd:PRK05846 80 VDGISLLLVVLTALLTPLAVLASWEEIK----KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 139 nQAERLSAGTYFLFYTLAGSLPL----LVALLLLHQNLGTLSMLTIqYSHPMTLNswGDKIWWAGCLIAFLVKMPLYGVH 214
Cdd:PRK05846 156 -GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADL-LNLPLPPG--VQYWLFLAFFIAFAVKMPMFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 215 LWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPL-SKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVS 293
Cdd:PRK05846 232 TWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSIS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 294 HMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPL 373
Cdd:PRK05846 312 HMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGT 391
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2201038916 374 PNLMGELVIITAMFNWSPWTLALTGAGTLITAAYSLYLFLMTQRGPLPQHIINLQPFHTREHLLM 438
Cdd:PRK05846 392 SGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLIL 456
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-434 |
9.79e-78 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 250.24 E-value: 9.79e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 57 MGTDPLSTPLLVLTCWLLPLMILASQNHIKteplNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 137 WGNQaERLSAGTYFLFYTLAGSLPLLVALLLLH-QNLGTLSMLTIQyshPMTLNSWGDKIWWAGCLIAFLVKMPLYGVHL 215
Cdd:TIGR01972 149 WGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELL---NLPLPFGVQTWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 216 WLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDP-LSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSH 294
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 295 MGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLP 374
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2201038916 375 NLMGELVIITAMFNWSPWTLALTGAGTLITAAYSLYLFLMTQRGPLP-QHIINLQPFHTRE 434
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGRE 445
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-412 |
5.90e-75 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 243.05 E-value: 5.90e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 53 SNLYMGTDPLSTPLLVLTCWLLPLMILASQNHIKTeplnRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLI 132
Cdd:MTH00204 75 GPLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 133 IITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGT---LSMLTIQYshPMTLNSWGdkiwWAGCLIAFLVKMP 209
Cdd:MTH00204 151 LIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTtdyQILLNIKL--PLSIQKWL----LVGFFLSLAVKIP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 210 LYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVYP-IIALALWGVIMTGSICMRQTDLKSLIA 288
Cdd:MTH00204 225 QIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPlIVMLSVIAVIYGSLTTCRQVDFKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 289 YSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANL 368
Cdd:MTH00204 305 YSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANM 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2201038916 369 ALPPLPNLMGELVIITAMFNWSPWTLALTGAGTLITAAYSLYLF 412
Cdd:MTH00204 385 GFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
42-412 |
4.39e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 230.32 E-value: 4.39e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 42 IKWSSETGWTSSNLYMGTDPLSTPLLVLTCWLLPLMILASQNHIKTeplnRQRSYITLLASLQTFLIMAFGATEIIMFYV 121
Cdd:MTH00217 61 FEWIPGIEPVFGPVVFAVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYI 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 122 MFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSMltiQYSHPMTLNSWGDKIWWAGCL 201
Cdd:MTH00217 137 LFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY---QALCCLKIEKELQYFIFLGFF 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 202 IAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVYPII-ALALWGVIMTGSICMRQ 280
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQ 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 281 TDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWW 360
Cdd:MTH00217 294 VDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILM 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2201038916 361 FISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGTLITAAYSLYLF 412
Cdd:MTH00217 374 LLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
2.04e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 217.18 E-value: 2.04e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 113 ATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSMLTIQYSHPMTLNSWG 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 193 DKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVYPIIALALWGVIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 273 TGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLA-NTTYERTHSRTMLLARGLQL 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2201038916 352 IFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-411 |
1.63e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 221.33 E-value: 1.63e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 55 LYMGTDPLSTPLLVLTCWLLPLMILASQNHIKTeplnRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIII 134
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 135 TRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSMLTIQYSHPMTLNSWGDKIWwAGCLIAFLVKMPLYGVH 214
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWIF-LGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 215 LWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPL-SKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVS 293
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 294 HMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPL 373
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*...
gi 2201038916 374 PNLMGELVIITAMFNWSPWTLALTGAGTLITAAYSLYL 411
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-382 |
1.29e-50 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 179.07 E-value: 1.29e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 57 MGTDPLSTPLLVLTCWLLPLMILASQNhIKTEPlnrqRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 137 WGNQaERLSAGTYFLFYTLAGSLPLLVALLLLHQNLG--TLSMLTI-QYSHPMTLNSWGdkiwWAGCLIAFLVKMPLYGV 213
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDtfTFDLAELgAKSYPLALELLL----YAGFLIAFGVKLPIFPL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 214 HLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILdpLSKDLVYPIIALALWGV--IMTGSIC-MRQTDLKSLIAYS 290
Cdd:PRK12561 205 HTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQM--LPDAHVYFAPALAILGVvnIIYGALNaFAQDNVKRRLAYS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 291 SVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLAL 370
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLAL 362
|
330
....*....|..
gi 2201038916 371 PPLPNLMGELVI 382
Cdd:PRK12561 363 PGMSGFVSELTV 374
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
60-416 |
5.06e-49 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 173.02 E-value: 5.06e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 60 DPLSTPLLVLTCWLLPLMILASQNHIKTEPlnRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITrWGN 139
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 140 QAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSMLTIQYSHPmTLNSWGDKIWWAGCLIAFLVKMPLYGVHLWLPK 219
Cdd:COG0651 152 TKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA-ELDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 220 AHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDP--LSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGL 297
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 298 VAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLM 377
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2201038916 378 GELVIITAMFNWSPWTLALTGA-GTLITAAYSLYLFLMTQ 416
Cdd:COG0651 391 SKWLLLQAALEAGAWLLAAVLLlSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
106-411 |
2.43e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 157.38 E-value: 2.43e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 106 FLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLllhqnlgtLSMLTIQYSHP 185
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFFFFSLCYF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 186 MTLNSWGDKIWwagCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMiilDPLSKDLVYPIIAL 265
Cdd:MTH00094 146 DFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRIL---GSLNFVYNNFWIIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 266 ALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLL 345
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2201038916 346 ARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGTLITAAYSLYL 411
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFL 365
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
44-409 |
1.38e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 149.47 E-value: 1.38e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 44 WSSETGWTSSnlyMGTDPLSTPLLVLTCWLLPLMILASQNhikteplnrqrsyITLLASLQTFLIMA--------FGATE 115
Cdd:PRK02546 73 WLPQLGLTWS---VGADGLSMPLILLTGFITTLAVLAAWP-------------VTFKPKLFYFLMLAmyggqiavFAVQD 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 116 IIMFYVMFEATLIPTLIIITRWGNQaERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLS--MLTI-QYSHPMTLNSWg 192
Cdd:PRK02546 137 MLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTfdMTALaAKDFGLGFQLL- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 193 dkiWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVYPI-IALALWGVI 271
Cdd:PRK02546 215 ---CYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLlIVLGVVNII 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 272 MTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQL 351
Cdd:PRK02546 292 YAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQ 371
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2201038916 352 IFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLA-------LTGAGTLITAAYSL 409
Cdd:PRK02546 372 KMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLPfrvvvvfLAAVGVILTPIYLL 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
54-429 |
2.16e-39 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 148.31 E-value: 2.16e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 54 NLYMGTDPLSTPLLVLTCWLLPLMILASQnhiktEPLNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLII 133
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 134 ITRWGNQaERLSAGTYFLFYT-------LAGSLPLLVALLLLHQNLGTLSMLTIQYSHPMTLnswgdkiwWAGCLIAFLV 206
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTaisgiliLVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLL--------LAPILVGFGI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 207 KMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVYPiiALALWGVI--MTGSIC-MRQTDL 283
Cdd:PRK06473 218 KIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAP--WLATWAVVsvLYGASCaIAQKDM 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 284 KSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGL---QLIFPLTAVWW 360
Cdd:PRK06473 296 KKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLM 375
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2201038916 361 FISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGTLITAAYSLYLFLMTQRGPLPQHIINLQP 429
Cdd:PRK06473 376 ILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-382 |
2.24e-39 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 148.55 E-value: 2.24e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 57 MGTDPLSTPLLVLTCWLLPLMILASQnhiktePLNRQ-RSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIIT 135
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 136 RWGNQaERLSAGTYFLFYTLAGSLPLLVALLLL---HQNLGTLSMLT-IQYSHPMTLnswgDKIWWAGCLIAFLVKMPLY 211
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglyGSNEPTLNFETlANQSYPVAL----EILFYIGFLIAYAVKLPII 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 212 GVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVYP-IIALALWGVIMTGSICMRQTDLKSLIAYS 290
Cdd:CHL00011 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPwLVIVGAIQIIYAASTSLGQRNLKKRIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 291 SVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERThsRTMLLAR--GLQLIFPLTAVWWFISNLANL 368
Cdd:CHL00011 309 SVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASL 386
|
330
....*....|....
gi 2201038916 369 ALPPLPNLMGELVI 382
Cdd:CHL00011 387 ALPGMSGFVAELIV 400
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
1.40e-35 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 127.64 E-value: 1.40e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 1 MLKILVPTMMLFPTIWLSPPKWLWTTTTLQSLTIALISLTWIKWSSETGWTSSNLYMGTDPLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2201038916 81 SQNHIKTEPLNRQRSYITLLASLQTFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-409 |
6.13e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 122.00 E-value: 6.13e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 60 DPLSTPLLVLTCWLLPLMILASQNHIKTEPLNRqrSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGN 139
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 140 QAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSM-----LTIQYSHPMTLNSWGDKIWWAG-----CLIAFLVKMP 209
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMadlsaKIRGLSFPLTGGLAGNPPLALGvalalALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 210 LYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMM-------IILDPLSKDLVYPIIALALWGVIMTGSICMRQTD 282
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 283 LKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFI 362
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2201038916 363 SNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGagtLITAAYSL 409
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL---LIASAISL 442
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
41-423 |
4.56e-28 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 116.35 E-value: 4.56e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 41 WIKWSSETGWTSSnlyMGTDPLSTPLLVLTCWLLPLMILASqnhikTEPLNRQRSYITLLASLQTFLIMAFGATEIIMFY 120
Cdd:PRK07363 62 YLPWNEPLGLSYS---LGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLILLINGGIAGALLAQNLLLFF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 121 VMFEATLIPTLIIITRWGNQaERLSAGTYFLFYT-LAGSLPLLVALLLLHQNLGTLSMLTIQYSHPMTLNSwgDKIWWAG 199
Cdd:PRK07363 134 LFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTaVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNT--QLILLTG 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 200 CLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVYPiiALALWGVI--MTGS-I 276
Cdd:PRK07363 211 LLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 277 CMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLI---F 353
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgL 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 354 PLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGTLITAAYSLYLFLMTQRGPLPQH 423
Cdd:PRK07363 369 PLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-412 |
9.41e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 109.58 E-value: 9.41e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 91 NRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPT--LIIITRwgnQAERLSAGTYFLFYTLAGSLPLLVALLLL 168
Cdd:PRK08375 103 HRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSyaLVAMGG---DRRALAAARKYLIVGLIGSTFLLIGVGLL 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 169 HQNLGTLSMLTIQYSHPmtlnswGDKIWWAG---CLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMM 245
Cdd:PRK08375 180 YGVTGTLNMADLAGALA------ENPTVVTAfgfVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALI 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 246 RMMI----ILDPLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHG 321
Cdd:PRK08375 254 RIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHA 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 322 LVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFN-WSPWTLALTGAG 400
Cdd:PRK08375 334 LMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLAS 413
|
330
....*....|..
gi 2201038916 401 TLITAAYSLYLF 412
Cdd:PRK08375 414 SLLALLYFLRIW 425
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-396 |
5.34e-25 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 107.32 E-value: 5.34e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILD-PLSKDLVYPI-IALALWGVIMTGSICM 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFPGRLlLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAV 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190
....*....|....*....|....*....|....*...
gi 2201038916 359 WWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLAL 396
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAI 418
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-432 |
1.81e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 87.50 E-value: 1.81e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIIL--DPLSKDLVYPIIALALWGVIMTGSICM 278
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSML 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAV 358
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAW 372
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2201038916 359 WWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTgAGTLITAAYSLYLFLMTQRGPLPQHIINLQPFHT 432
Cdd:PRK08676 373 GVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAASSFAIFLLKAFTRVSEGNADRPVFRT 445
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-413 |
3.28e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 86.54 E-value: 3.28e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 91 NRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITrWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQ 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 171 NLGTLSMLTIQYSHPMTLnswgdkiwwAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMII 250
Cdd:PRK07234 170 ANGTFAFSGLATADPEAF---------ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 251 LDPLSKDLVYPIIALALWGVImtgsICMRQTDLKSLIAYSSVSHMGLVAGGILIqtpwgftgALVLMIAHGLVSSALFCL 330
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 331 ANTTYERTHS--RTMLLARGlqlifpltaVWWFISnLANLALPPLPNLMGELVIITAMFNWSPW-TLALTGAGTLITAAY 407
Cdd:PRK07234 309 AGALPSRNFTelISQMLGIG---------KWIPLT-MASFSIAGFPLLAGFVSKVLTLKNLLPWqAIALNLAAVGTAASF 378
|
....*.
gi 2201038916 408 SLYLFL 413
Cdd:PRK07234 379 WKFIFL 384
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
54-411 |
3.96e-17 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 83.66 E-value: 3.96e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 54 NLYMGtdPLSTPLLVLTCWLLPLMILASQNHIKTEPLNRqrsYITLlaslqtFLIMAFGATEIIM------FYVMFEATL 127
Cdd:PRK08377 73 NLYIG--PFAALFVLIIAIVSFIMSIFSLKAVEVEPIDK---YAML------FLLLMLGATGMIAtgdifnLFVFMEITA 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 128 IpTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSMLTIQySHPMTLNSWGDKIWWAGCLIAFLVK 207
Cdd:PRK08377 142 I-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIA-QLAGTIDPTVAQVGLALLIFGLAVE 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 208 MPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLS--KDLVYPIIALALWGVIMTGSICMRQTDLKS 285
Cdd:PRK08377 220 AELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQKNVKR 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 286 LIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNL 365
Cdd:PRK08377 300 MIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGAL 379
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2201038916 366 ANLALPPLPNLMGELVIITAMFNWS-PWTLALTGAGTLITAAYSLYL 411
Cdd:PRK08377 380 STVGIPLFNVFWSKFRIILAGLSAGyTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-410 |
5.29e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 83.09 E-value: 5.29e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 105 TFLI------MAFGATEIIMFYVMFEATLIPTLIIITRwGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSML 178
Cdd:PRK12665 116 TYLIlvagvsNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 179 TIQYSHPmTLNSWGDKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPL-SKD 257
Cdd:PRK12665 195 DLAVRLD-ELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGgGLD 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 258 LVYPIIALALWGVIMTGSICmrQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYER 337
Cdd:PRK12665 274 TLLMVVALLTMVVGILGAIA--QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQ 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2201038916 338 THSRTMLLARGLQLIFPLTAVWWFISNLaNLA-LPPLPNLMGELVIITA-MFNWSPWTLALTgAGTLITAAYSLY 410
Cdd:PRK12665 352 AGSSSLRRLGGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALV-AGGVVTSLLTLY 424
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
86-433 |
6.80e-16 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 79.61 E-value: 6.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 86 KTEPLNRQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITrWGNQAERLSAGTYFLFYTLAGSLPLLVAL 165
Cdd:PRK12663 100 DIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGI 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 166 LLLHQNLGTLSMLTIQyshpMTLNSWGDK----IWWAGCLIAFLVKMPLYGVHlWLPKAHVEAPVAGSMVLAAILLKLGG 241
Cdd:PRK12663 179 GLLYGTFGTLNMAHIA----MRLNDMGDTatltTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGI 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 242 YGMMRMMIILDPLSKDLVYPIIALALWGVIMTGSI-CMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAH 320
Cdd:PRK12663 254 YALIRVFTLLFPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHD 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 321 GLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAG 400
Cdd:PRK12663 334 MVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLI 413
|
330 340 350
....*....|....*....|....*....|....
gi 2201038916 401 TLITAAYSLY-LFLMTQRGPLPQHIINLQPFHTR 433
Cdd:PRK12663 414 TSLITMYSLFrIFFLAYWGDKDGEEVNFKPIPLY 447
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
92-413 |
7.92e-16 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 80.09 E-value: 7.92e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 92 RQRSYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTyfLFYTLAGSLPLLVALLLLHQN 171
Cdd:PRK12650 108 GNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQ 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 172 LGTLSMLTIQYShpmtlNSWGDKIWWAGcLIAFLVKMPLYG------VHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMM 245
Cdd:PRK12650 186 TGTTSLSGILHS-----DVWAEKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 246 RMMIILdplSKDLVYPI--IALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLV 323
Cdd:PRK12650 260 RFSPVF---HDVAVWNWllIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALF 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 324 SSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMF-----NWSPWTLALT- 397
Cdd:PRK12650 337 KSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLeapggNAGVVLLLVGa 416
|
330
....*....|....*.
gi 2201038916 398 GAGTLITAAYSLYLFL 413
Cdd:PRK12650 417 ALGAVFTFAYSARLVL 432
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
202-387 |
2.20e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 78.62 E-value: 2.20e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 202 IAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRmmIILDPLSKDLVYPIIAL------ALWGVIMTgs 275
Cdd:PRK08667 213 LGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILlagsisALLGVIYA-- 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 276 icMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTG-----------ALVLMIAHGLVSSALFCLANTTYERTHSRTML 344
Cdd:PRK08667 289 --LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIE 366
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2201038916 345 LARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMF 387
Cdd:PRK08667 367 KMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-373 |
7.13e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.96 E-value: 7.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 111 FGATEIIMFYVMFEATLIPTLIIITRwGNQAERLSAGTYFLFYTLaGSLPLLVALLLLHQNLGTLSMLTIqySHPMTLNS 190
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADI--SQGLINDT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 191 WGDKIWWAGCLI--AFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILdPLSKDLV--------- 259
Cdd:PRK08668 191 STGFALIVFLFLlaFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgvp 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 260 ---YPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYE 336
Cdd:PRK08668 270 lfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
250 260 270
....*....|....*....|....*....|....*..
gi 2201038916 337 RTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPL 373
Cdd:PRK08668 350 RTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPM 386
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-414 |
9.26e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 73.21 E-value: 9.26e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 119 FYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSMLTIqySHPMTLNSWG-DKIWW 197
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYL--AVKMSENPTVvAKIAL 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 198 AGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAIllKLGG-YGMMRMMIILDPLSKDLV---YPIIALALWGVIMT 273
Cdd:PRK08376 224 ALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVI--KQAGlYALARVLFSIYGPAINLAtvgWVIIILGCLTMFVG 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 274 GSICMRQTDLKSLIAYSSVSHMG---------LVAGGILIQTPWGFT---GALVLMIAHGLVSSALFCLANTTYERTHSR 341
Cdd:PRK08376 302 VAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETGTR 381
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2201038916 342 TMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGT-LITAAYSLYLFLM 414
Cdd:PRK08376 382 NLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSvLTLASFVKVFHTA 455
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-424 |
3.58e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 71.34 E-value: 3.58e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 214 HLWLPKAhVEAPVAGSMVL-AAILLKLGGYGMMRMMIILDpLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSV 292
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 293 SHMGLVAGGILIQtpwGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPP 372
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2201038916 373 LPNLMGELVIITAMF---NWSPWTLALTGAGTLITAAYSLYLFLMT----QRGPLPQHI 424
Cdd:COG1009 386 FAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVffgkPRPKTPKHP 444
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
1.16e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 69.95 E-value: 1.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 214 HLWLPKAhVEAPVAGSMVL-AAILLKLGGYGMMRMMIIL--DPLSKDLVYPIIALALwgvIMTGSICMRQTDLKSLIAYS 290
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVLggTPLWQTILPLFGGLTM---LTGALLAVRQTDLKLILAYS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 291 SVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLAL 370
Cdd:PRK12647 291 TVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGL 370
|
170 180 190
....*....|....*....|....*....|..
gi 2201038916 371 PPLPNLMGELVIITAMFNWSPWTLALTGAGTL 402
Cdd:PRK12647 371 PPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-387 |
2.77e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 65.36 E-value: 2.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVYPIIA-LALWGVIM--TGSIC 277
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILiLALLTIIFgvIGAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 278 mrQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTA 357
Cdd:PRK07691 296 --YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLG 373
|
170 180 190
....*....|....*....|....*....|
gi 2201038916 358 VWWFISNLANLALPPLPNLMGELVIITAMF 387
Cdd:PRK07691 374 WMFFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
208-373 |
7.21e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 64.52 E-value: 7.21e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 208 MPLygvHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIildplskDLVYPiiALALWGVIM--TGSI--------C 277
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVF-------DLLGA--PGWWWGVLVlaLGAIsavlgvlyA 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 278 MRQTDLKSLIAYSSVSHMGLV-----------AGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLA 346
Cdd:PRK06521 295 LAEHDLKRLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKL 374
|
170 180
....*....|....*....|....*..
gi 2201038916 347 RGLQLIFPLTAVWWFISNLANLALPPL 373
Cdd:PRK06521 375 GGLIRRMPWTAWAFLIGCLAISALPPL 401
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-409 |
1.20e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 63.21 E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 9 MMLFPTIWLSPPKWLWTTTTLQSLTIALIsLTWIKWSSETGWTSSNLYMgTDPLSTPLLVLTCWLLPLMILASQNHIKTE 88
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLALA-LLLLALGGGTGTAFGGMFV-VDGFALFFKLLILLAALLVLLLSRDYLERR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 89 PLNRQRSYITLLASLQTFLIMAfGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGT-YFLFYTLAGSLPllvalll 167
Cdd:COG1007 98 GLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFL------- 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 168 lhqnL----------GTLSMLTIqySHPMTLNSWGDKIWWAGC---LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAA 234
Cdd:COG1007 170 ----LygisllygatGSLNLAGI--AAALAAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAT 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 235 ILlKLGGYGM-MR-MMIILDPLSKDLVYPIIALALwgVIMT-GSIC-MRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGF 310
Cdd:COG1007 244 AP-KIAAFAAlLRlLVEAFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 311 TGALVLMIAHGLVSSALF-CLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNW 389
Cdd:COG1007 321 SAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEA 400
|
410 420
....*....|....*....|.
gi 2201038916 390 SPWTLALTGA-GTLITAAYSL 409
Cdd:COG1007 401 GLYWLAVIAVlNSVISAYYYL 421
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
198-402 |
2.43e-10 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 62.30 E-value: 2.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 198 AGCLIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAILLKLGGYGMMRMMIILDPLSKDLVYPIIALALwgVIMTGSI 276
Cdd:PRK06525 211 LGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAI--VTLLYGF 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 277 CMR--QTDLKSLIAYSSVSHMGLVAGGILIQ---TPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQL 351
Cdd:PRK06525 288 LMYlpQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLK 367
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2201038916 352 IFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGTL 402
Cdd:PRK06525 368 KLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
170-388 |
2.86e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 62.54 E-value: 2.86e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 170 QNLGTLSMLTIqySHPMTLNSWGDKIWWAGcLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMI 249
Cdd:PRK08042 159 QRYGTLDLRLL--DMRMQQLPLGSDIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 250 ILDPLSKDLVYPIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLV-----AG--GILIQTP----WGFTGALVLMI 318
Cdd:PRK08042 236 LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHLL 315
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 319 AHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFN 388
Cdd:PRK08042 316 NHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-414 |
6.10e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 60.99 E-value: 6.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLVY-----PIIALALWGVIMTGS 275
Cdd:PRK06589 217 FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnWLIFIPIVSIFYSSL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 276 ICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPL 355
Cdd:PRK06589 297 KALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPL 376
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2201038916 356 TAVWWFISNLANLALPPLPNLMGELVIITAMFNWS-PWTLALTGAGTLITAAY-SLYLFLM 414
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqPWLSIIVMLVVIASSILsALYLLKI 437
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-331 |
3.55e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.59 E-value: 3.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 193 DKIWWAGCLIAFL---VKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRmmIILDPLSKDLVYP-------I 262
Cdd:PRK12662 205 NRAIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIR--IVYDVFKANFVFTtlpfnnvF 282
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2201038916 263 IALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLA 331
Cdd:PRK12662 283 MILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVS 351
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
113-431 |
3.75e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.00 E-value: 3.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 113 ATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSMLTI-QYSHPMTLNSW 191
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEIlGQADHIKNHGL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 192 GDKIWWAGCLIAFlVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAILLKLGGYGMMRMMIILDpLSKDLVYPIIALALWGV 270
Cdd:PRK12646 209 FIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITM 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 271 IMTGSICMRQTDLKSLIAYSSVSHMGLVA-----GGILIQTPWG---------FTGALVLMIAHGLVSSALFCLANTTYE 336
Cdd:PRK12646 286 LFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvLFAALFHLMNHAIFKCALFMGVGIIDH 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 337 RTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFN---WSPWTLALTGAGTLI-------TAA 406
Cdd:PRK12646 366 EAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqLSQFSLISMIIIVFIgviasifTFT 445
|
330 340
....*....|....*....|....*
gi 2201038916 407 YSLYLFLMTQRGPLPQHIINLQPFH 431
Cdd:PRK12646 446 YALYMVKEVFWGKYDSKVFTKKNIH 470
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
201-410 |
1.78e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.86 E-value: 1.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 201 LIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAILLKLGGYGMMRMMiildPLSKDL---VYPIIALALWGVIMTGSI 276
Cdd:PRK12644 210 LVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PGFADVpvwRPTVLVLGLATMLLGGWR 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 277 CMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLT 356
Cdd:PRK12644 285 ALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVL 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 357 AVWWFISNLANLALPPLPNLMGELVIITAMFN------WSPWTLALTGAGTLITAAYSLY 410
Cdd:PRK12644 365 AVVAALAAASMAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
233-388 |
3.03e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 55.81 E-value: 3.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 233 AAILLKLGGYGMMRMMIILDPLSKDLVY------PIIALALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQT 306
Cdd:PRK06277 234 SALLQTFSKFVLVALMLVIFKLFGGLSYfpsaqgVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGT 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 307 PWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAM 386
Cdd:PRK06277 314 PLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAA 393
|
..
gi 2201038916 387 FN 388
Cdd:PRK06277 394 MQ 395
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-373 |
4.52e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 55.61 E-value: 4.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 94 RSYITLLASLQTFLIMAFGATEIIMFyVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 174 TLSMLTIQYSHPMTLNSWGDKIWWAGCLIAFL------VKMPLYgvhLWLPKAhVEAPVAGSMVL-AAILLKLGGYGMMR 246
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVAR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 247 MMIILDPLSKDLVYpIIALALWGVIMTGSICMRQTDLKSLIAYSSVS---HMGLVAGGILIQTP-WGFTGALVLMIAHGL 322
Cdd:PRK12649 267 IHPIFSGTEAWFIL-VSGTGMITMVLAGFLAFRQTDIKAILAYSTISqlaYLMTMYGYTTYHEPgLGVAAATFHLLNHAT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2201038916 323 VSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPL 373
Cdd:PRK12649 346 FKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPL 396
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
106-345 |
4.31e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 51.85 E-value: 4.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 106 FLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSmltiqYSHP 185
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN-----FSDW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 186 MTLNSWGDKIWWAGCLIaFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKdLVYPIIAL 265
Cdd:MTH00062 158 GSDDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF-LGYLFLCC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 266 ALWGVIMTGSicMRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLL 345
Cdd:MTH00062 236 LFSVFFLITA--CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-407 |
8.63e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 51.10 E-value: 8.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAaILLKLGGYG-MMRMMI-ILDPLSKDLVYPIIALALWGVIMTGSICM 278
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIAIFAvFLRLFLyILFGFSEAWQIFLAIIAFLSMLIGNFGAL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALF-CLANT-TYERTHSRTMLLARGLQLIFPLT 356
Cdd:TIGR01770 289 AQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPIL 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2201038916 357 AVWWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGTLITAAY 407
Cdd:TIGR01770 369 AILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAF 419
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-403 |
4.27e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 49.08 E-value: 4.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 201 LIAFLVKMPLYGVHLWLPKAHVEA--PVAGsmvLAAILLKLGGYGMMRM-MIILDP-------LSKDLVYPI----IALA 266
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPeagasagFGQDWLLPGglatLAFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 267 LWGVIMTgsicmrqTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTyERTHS------ 340
Cdd:PRK12666 294 AIGVLAA-------QRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADLV-ERQRGaaadrl 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 341 -RTMLLARGLQLIFPLTAVW-----------WFISNLANLALPPLPNLMGELVIITAMFN----WSPWTLA----LTGAG 400
Cdd:PRK12666 366 aVTPELYDLDEEEEEEVGVAipatmallgllFFICALALAGLPPLSGFLGKFALLQALLNppgaGAAWWLWalvlLSGLA 445
|
...
gi 2201038916 401 TLI 403
Cdd:PRK12666 446 ALI 448
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
6.11e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 48.87 E-value: 6.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 197 WAGCLIAFLVKM---------PLygvHLWLPKAhVEAPV-------AGSMVLAAILLklggygMMRMmiilDPLSKDLVY 260
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL------VARM----YPVFEQFPA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 261 PIIALALWGVI---MTGSICMRQTDLKSLIAYSSVSHMG--LVAGGIliqtpWGFTGALVLMIAHGLVSSALFCLANTT- 334
Cdd:PRK07376 290 VMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGymVMAMGC-----GAYSAGLFHLMTHAYFKAMLFLGSGSVi 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 335 --------YERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMFNWSP--WTLALTGAGtlIT 404
Cdd:PRK07376 365 hgmeevvgHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPalWFVGFLTAG--MT 442
|
250
....*....|....
gi 2201038916 405 AAYSLYLFLMTQRG 418
Cdd:PRK07376 443 AFYMFRMYFLTFEG 456
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
201-328 |
6.70e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 48.28 E-value: 6.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILlKLGGYGM-MR-MMIILDPLSKDLVYPIIALALWGVIMTGSICM 278
Cdd:PRK05777 211 LVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRlLVVAFGGLSEDWQQVLAIIAIASMLVGNLAAL 289
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2201038916 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALF 328
Cdd:PRK05777 290 SQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-415 |
2.37e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.61 E-value: 2.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 212 GVHLWLPKAhVEAPVAGS-MVLAAILLKLGGYGMMRMMIILDPLSKDLVYPIIALALwGVIMTGSICMRQTDLKSLIAYS 290
Cdd:MTH00020 228 GLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSL-TVFFAATVGLVQNDLKKVIAYS 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 291 SVSHMG--LVAGGIliqtpWGFTGALVLMIAHGLVSSALFCLANTT-YERTHSRTMLLARGLQLIFPLTAVWWFISNLAN 367
Cdd:MTH00020 306 TCSQLGymVVACGL-----SHYSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSL 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2201038916 368 LALPPLPNLMGELVIITAMFNWSPWTLA--LTGAGTLITAAYSLYLFLMT 415
Cdd:MTH00020 381 MGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLT 430
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-414 |
3.81e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.57 E-value: 3.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILlKLGGYGMMRMMIILDPLSKDLVYPIIALALWGVIMTgsicMRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFLDLYWLAYLLCVISVLSALVGSIGG----LNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 281 TDLKSLIAYSSVSHMGLVAGGILiqtpWGFTGALVLMIAHGLVSSALFCLANttYERTHSRTMLLARGLQLIFPLTAVWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFSLW--SGDSGSMKDLGSLKPSYKTGLSIISL 239
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2201038916 361 FISnLAnlALPPLPNLMGELVIITAMFNWSPWTLALTG-AGTLITAAYSLYLFLM 414
Cdd:MTH00144 240 LLS-LG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFS 291
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-396 |
1.06e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 41.43 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 214 HLWLPKAhVEAPVAGSMVLAAILLKLGGYGMMRMM--IILDPLSKDLvypIIALALWGVIMTGSICMRQTDLKSLIAYSS 291
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQpvLALSPVALTV---LIVIGTVTAIGASLVAIAQIDIKRALSYST 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 292 VSHMGLVAGGILIQTPwgfTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWFISNLANLALP 371
Cdd:PRK07390 317 SAYLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALL 393
|
170 180
....*....|....*....|....*
gi 2201038916 372 PLPNLMGELVIITAMFNWSPWTLAL 396
Cdd:PRK07390 394 PLGGFWALLRLADGLWAVSPWLVGV 418
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
172-415 |
1.11e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.48 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 172 LGTLSMLTIQYSHPMTLNSWgdkIWWAGCLIAFLVKMPLYGVHLWLPKAhVEAPVAGS-------MVLAAILLklggygm 244
Cdd:MTH00211 185 LLNLNSWEISQLFILNLDLT---LFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------- 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 245 mrmMIILDPLSKDLVYPIIALALWG---VIMTGSICMRQTDLKSLIAYSSVSHMGLVAGGILIQTPwgfTGALVLMIAHG 321
Cdd:MTH00211 254 ---LIRLSPLFQNNQLILGAVLLLGaltMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP---QLAFLHICTHA 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 322 LVSSALF----CLANTTYERTHSRTMllaRGLQLIFPLTAVWWFISNLANLALPPLPNLMGELVIITAMF--NWSPWTLA 395
Cdd:MTH00211 328 FFKAMLFmcsgSIIHGLNNEQDIRKM---GGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNgsYLNAWALL 404
|
250 260
....*....|....*....|
gi 2201038916 396 LTGAGTLITAAYSLYLFLMT 415
Cdd:MTH00211 405 LTLLATSLTAAYSFRLIFLS 424
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
204-387 |
1.68e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.93 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 204 FLVKMPLYGVHL--WLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMIILDPLSKDLV-YPIIALALWGVIMTGSICMRQ 280
Cdd:PRK06459 168 FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFgLTILAIGAFSILFGALYAYVS 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 281 TDLKSLIAYSSVSHMG--LVAGGILI------QTPWGFTGALVLM--IAHGLVSSALFCLANTTYERTHSRTMLLARGlq 350
Cdd:PRK06459 248 ENVKGLLAFSTIENNGaiLVALGLYMvtkqliTSIEHFSLITVILysFAHSVAKTGLFLSSGLQEKQSITYSKKIRNR-- 325
|
170 180 190
....*....|....*....|....*....|....*..
gi 2201038916 351 lifpLTAVWWFISNLANLALPPLPNLMGELVIITAMF 387
Cdd:PRK06459 326 ----WIELGLTLLASSLSGLLPNIGGVASWLLLESLF 358
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-409 |
2.62e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 40.17 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 214 HLWLPKAhVEAPVAGSMVL-AAILLKLGGYGMMRMmiildplskdlvYPIIA---LALWGVIMTG--------SICMRQT 281
Cdd:PRK12648 227 HFWLPHA-MAAPTPVSAYLhSATMVKAGVFLLARL------------WPVLAgteEWFWIVGGAGlitlllgaYFALFQH 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 282 DLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQLIFPLTAVWWF 361
Cdd:PRK12648 294 DLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATLAM 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2201038916 362 ISNLAnLALPPLPN------LMGELVIITAMFNWSPWTLAL--TGAGTLiTAAYSL 409
Cdd:PRK12648 374 VAAAA-MAGVPLLNgflskeMFFAETLDTHLLGSLDWLLPVaaTLAGAF-SVAYSL 427
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
214-419 |
2.84e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 40.29 E-value: 2.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 214 HLWLPKAhVEAPVAGSMVL-AAILLKLGGYGMMRMMIIldplskdlvYPIIALALWGVIMTGSICM--------RQTDLK 284
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFTPI---------FAGSQVWFWTVTLVGLITLfwgslnavKQTDLK 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 285 SLIAYSSVSHMGLV-----AGGILIQTPWG--------FTGALVLMIAHGLVSSALFCLANTTYERTHSRTMLLARGLQL 351
Cdd:PRK12645 300 GILAFSTVSQLGLImsllgIGAASLHYQGDdskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMT 379
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2201038916 352 IFPLTAVWWFISNLANLALPPLPNLMGELVIITAM--------FNWSPWTL---ALTGAGTLITAAYSLYLFLMTQRGP 419
Cdd:PRK12645 380 IMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMlnateanlFSLDTWGVlfpVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-383 |
3.33e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 39.94 E-value: 3.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 60 DPLSTPLLVLTCWLLPLMILASQNHIKTEP-LNRQRSYITLLaslqTFLIMAFGATE-IIMFYVMFEATLIPTLIIITRW 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLF----TFLMMVLVTSDnYLQLFIGWEGVGVCSYLLVAFW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 138 GNQAERLSAGTYFLFYTLAGSLPLLVALLLLHQNLGTLSMLTIQ-------------YSHPMTLNSWGDkiwWAGCLIAF 204
Cdd:MTH00032 155 TTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyYGGGAYESPLAP---FAIIGILL 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 205 LV----KMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMiildPLSKDLVYPIIALALWGVI---MTGSIC 277
Cdd:MTH00032 232 LIgcigKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 278 MRQTDLKSLIAYSSVSHMGLVAggILIQTPWGFTGALVLMIAHGLVSSALFCLA-----NTTYERTHSRTMllaRGLQLI 352
Cdd:MTH00032 308 LVQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHS 382
|
330 340 350
....*....|....*....|....*....|.
gi 2201038916 353 FPLTAVWWFISNLANLALPPLPNLMGELVII 383
Cdd:MTH00032 383 IPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
198-423 |
3.58e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.68 E-value: 3.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 198 AGCLIAF--LVKMPLYGVHLWLPKAhVEAPVAGSMVLAAILLKLGGYgmmrMMIILDPLSKDLVYPIIALALWGVIMT-- 273
Cdd:PRK08168 202 AALLLVLavILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGF----VLIRFAPLLEQAPPARWLLVLVGLATAvl 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 274 -GSICMRQTDLKSLIAYSSVSHMGLvaggILIQTPWG-FTGALVLMIAHGLVSSALFCLANTTYERTHSRTM-------- 343
Cdd:PRK08168 277 aGLVMLTRISIKVRLAWSTVAQMGF----MLLECGLGlYELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLqgpqsaag 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 344 ---LLARGLQLIFPLTAV--WWFISNLANLALPPLPNLMGELVIITAMFNWSPWTLALTGAGTLitAAYSLyLFLMTQRG 418
Cdd:PRK08168 353 vvsLLLAPLLSAALVLLLqsLLPLGAWPWWWSAVLALAWAPLLWQPCASGASTLSGLGLGLLLV--AGLTA-LAFLAHLL 429
|
....*
gi 2201038916 419 PLPQH 423
Cdd:PRK08168 430 PLGLA 434
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
202-328 |
9.48e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.09 E-value: 9.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2201038916 202 IAFLVKMPLYGVHLWLPKAHVEAPVAgSMVLAAILLKLGgygmmrMMIILdpLSKDLVYPIIALALWGVIMTGSI-CMRQ 280
Cdd:MTH00196 103 VALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLG------IFSIL--VSIGLNVNILLIGGLFSLFVGAIgALNQ 173
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2201038916 281 TDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALF 328
Cdd:MTH00196 174 TKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| |
