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Conserved domains on  [gi|2240011758|gb|UQT07533|]
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NADH dehydrogenase subunit III, partial (mitochondrion) [Pteroptochos tarnii]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-113 5.30e-64

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 189.75  E-value: 5.30e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQ 80
Cdd:MTH00136    4 ITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLP 83

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2240011758  81 SPLTTLTWATSIIIILTLGLVYEWLQGGLEWAE 113
Cdd:MTH00136   84 SPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-113 5.30e-64

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 189.75  E-value: 5.30e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQ 80
Cdd:MTH00136    4 ITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLP 83

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2240011758  81 SPLTTLTWATSIIIILTLGLVYEWLQGGLEWAE 113
Cdd:MTH00136   84 SPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
17-110 2.21e-34

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 114.06  E-value: 2.21e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758  17 TLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QSPLTTLTWATSIIII 95
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 2240011758  96 LTLGLVYEWLQGGLE 110
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-111 1.97e-29

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 102.12  E-value: 1.97e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQ 80
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2240011758  81 S-PLTTLTWATSIIIILTLGLVYEWLQGGLEW 111
Cdd:COG0838    86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-113 5.30e-64

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 189.75  E-value: 5.30e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQ 80
Cdd:MTH00136    4 ITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLP 83

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2240011758  81 SPLTTLTWATSIIIILTLGLVYEWLQGGLEWAE 113
Cdd:MTH00136   84 SPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-113 6.39e-59

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 176.72  E-value: 6.39e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQ 80
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2240011758  81 SPLTTLTWATSIIIILTLGLVYEWLQGGLEWAE 113
Cdd:MTH00069   82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-112 1.28e-57

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 173.53  E-value: 1.28e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQ 80
Cdd:MTH00113    3 LISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLT 82

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2240011758  81 SPLTTLTWATSIIIILTLGLVYEWLQGGLEWA 112
Cdd:MTH00113   83 TPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-113 4.27e-49

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 152.02  E-value: 4.27e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQ 80
Cdd:MTH00106    3 LMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTN 82

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2240011758  81 SPLTTLTWATSIIIILTLGLVYEWLQGGLEWAE 113
Cdd:MTH00106   83 NLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-113 3.73e-41

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 131.64  E-value: 3.73e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQ 80
Cdd:MTH00042    4 LIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLIT 83

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2240011758  81 SPLTTLTWATSIIIILTLGLVYEWLQGGLEWAE 113
Cdd:MTH00042   84 NPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-111 8.12e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 128.48  E-value: 8.12e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQ 80
Cdd:MTH00203    4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2240011758  81 SPltTLTWATSIIIILTLGLVYEWLQGGLEW 111
Cdd:MTH00203   84 SL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
17-110 2.21e-34

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 114.06  E-value: 2.21e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758  17 TLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QSPLTTLTWATSIIII 95
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 2240011758  96 LTLGLVYEWLQGGLE 110
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-113 4.86e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 108.79  E-value: 4.86e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQM-NPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQL 79
Cdd:MTH00148    4 ILLSLLFALILSPVLLLLGLVLSKRsYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGS 83

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2240011758  80 QSPLTTLTWATSIIIILTLGLVYEWLQGGLEWAE 113
Cdd:MTH00148   84 SFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 1-112 6.34e-30

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 103.41  E-value: 6.34e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL- 79
Cdd:PRK06602   11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFr 88

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2240011758  80 QSPLTTLTWATSIIIILTLGLVYEWLQGGLEWA 112
Cdd:PRK06602   89 EIGWLGFVEAMIFILVLLVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-111 1.97e-29

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 102.12  E-value: 1.97e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQ 80
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2240011758  81 S-PLTTLTWATSIIIILTLGLVYEWLQGGLEW 111
Cdd:COG0838    86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-111 1.97e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 102.16  E-value: 1.97e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNP-DSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQL 79
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSImDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2240011758  80 QSPLTTLTWATSIIIILTLGLVYEWLQGGLEW 111
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-111 2.81e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 101.71  E-value: 2.81e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQ 80
Cdd:MTH00055    8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYN 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2240011758  81 SPLTTLTWATSI-IIILTLGLVYEWLQGGLEW 111
Cdd:MTH00055   86 QIGLFGFWVMYLfLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-111 1.65e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 99.75  E-value: 1.65e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQ 80
Cdd:MTH00018    3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQI 82

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2240011758  81 SPLTTLTWATsIIIILTLGLVYEWLQGGLEW 111
Cdd:MTH00018   83 APFGFWTMVG-FLFILTLGLIYEWIKGGLEW 112
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-113 5.18e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 95.83  E-value: 5.18e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWL-AQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQL 79
Cdd:MTH00202    4 ILFMSILSILISSLLFLVSWMLsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKS 83

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2240011758  80 QSPLTTLTWATSIIIILTLGLVYEWLQGGLEWAE 113
Cdd:MTH00202   84 SWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 4-112 6.34e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 90.69  E-value: 6.34e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   4 MLMISISLSIILTTLNFWLA-QMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQSP 82
Cdd:MTH00012    7 PMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTS 86

                          90       100       110
                  ....*....|....*....|....*....|
gi 2240011758  83 LTTLTWATSIIIILTLGLVYEWLQGGLEWA 112
Cdd:MTH00012   87 KTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 1-111 8.99e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 80.36  E-value: 8.99e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL- 79
Cdd:MTH00030   13 LLGVGIILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFn 90

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2240011758  80 QSPLTTLTWATSIIIILTLGLVYEWLQGGLEW 111
Cdd:MTH00030   91 QLNLFSFWIVYTFLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 2-111 5.80e-16

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 68.09  E-value: 5.80e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   2 LFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQS 81
Cdd:CHL00022   11 WAFLIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDV 88

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2240011758  82 -PLTTLTWATSIIIILTLGLVYEWLQGGLEW 111
Cdd:CHL00022   89 lGVSAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 1-111 1.47e-12

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 59.30  E-value: 1.47e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLP--FSIRFFLVAILFLLFDLEIALLLPlpWATQ 78
Cdd:PRK07928    7 ILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVS 84

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2240011758  79 LQSpLTTLTWATSIIIILTLGL--VYEWLQGGLEW 111
Cdd:PRK07928   85 FDA-LGVFGLVEMALFMLTVFVayAYVWRRGGLEW 118
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
1-111 6.50e-12

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 57.45  E-value: 6.50e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPlpWATQL- 79
Cdd:PRK07756   12 VLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYd 89

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2240011758  80 QSPLTTLTWATSIIIILTLGLVYEWLQGGLEW 111
Cdd:PRK07756   90 KLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
22-111 6.71e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 52.36  E-value: 6.71e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758  22 LAQMNPDSEKLSPYECGFDPLGTARlPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQS-PLTTLTWATSIIIILTLGL 100
Cdd:PRK08489   38 LAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLlGLFGLIEMLLFIVLLTIGF 114

                          90
                  ....*....|.
gi 2240011758 101 VYEWLQGGLEW 111
Cdd:PRK08489  115 IYAWKKGALEW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-111 2.23e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 47.97  E-value: 2.23e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2240011758   1 ILFMLMISISLSIILTTLNFWLAQMNPDSEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLpwatqLQ 80
Cdd:MTH00092    4 LIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL-----LV 78

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2240011758  81 SPLTTLTWATSIIIILTLGLVYEWLQGGLEW 111
Cdd:MTH00092   79 SDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 33-111 5.37e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.11  E-value: 5.37e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2240011758  33 SPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLqspLTTLTWATSIIIILTLGLVYEWLQGGLEW 111
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLL---FYNFWYYYFFLLLLFLGFVVELFSGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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