methyltransferase domain-containing protein [Bacillus subtilis]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | |||||
| WcaE | COG1216 | Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]; |
1-239 | 3.01e-53 | |||||
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]; : Pssm-ID: 440829 [Multi-domain] Cd Length: 202 Bit Score: 177.49 E-value: 3.01e-53
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| UbiG | COG2227 | 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
237-361 | 3.50e-12 | |||||
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis : Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 63.11 E-value: 3.50e-12
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| Name | Accession | Description | Interval | E-value | |||||
| WcaE | COG1216 | Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]; |
1-239 | 3.01e-53 | |||||
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]; Pssm-ID: 440829 [Multi-domain] Cd Length: 202 Bit Score: 177.49 E-value: 3.01e-53
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| GT_2_like_c | cd04186 | Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ... |
6-212 | 7.90e-49 | |||||
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Pssm-ID: 133029 [Multi-domain] Cd Length: 166 Bit Score: 164.65 E-value: 7.90e-49
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| Glycos_transf_2 | pfam00535 | Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ... |
5-171 | 2.78e-24 | |||||
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Pssm-ID: 425738 [Multi-domain] Cd Length: 166 Bit Score: 98.62 E-value: 2.78e-24
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| UbiG | COG2227 | 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
237-361 | 3.50e-12 | |||||
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 63.11 E-value: 3.50e-12
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| glyco_like_mftF | TIGR04283 | transferase 2, rSAM/selenodomain-associated; This enzyme may transfer a nucleotide, or it ... |
5-197 | 7.41e-12 | |||||
transferase 2, rSAM/selenodomain-associated; This enzyme may transfer a nucleotide, or it sugar moiety, as part of a biosynthetic pathway. Other proposed members of the pathway include another transferase (TIGR04282), a phosphoesterase, and a radical SAM enzyme (TIGR04167) whose C-terminal domain (pfam12345) frequently contains a selenocysteine. [Unknown function, Enzymes of unknown specificity] Pssm-ID: 275103 [Multi-domain] Cd Length: 220 Bit Score: 64.84 E-value: 7.41e-12
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| PRK10073 | PRK10073 | putative glycosyl transferase; Provisional |
3-108 | 1.92e-09 | |||||
putative glycosyl transferase; Provisional Pssm-ID: 182223 [Multi-domain] Cd Length: 328 Bit Score: 58.90 E-value: 1.92e-09
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| Methyltransf_11 | pfam08241 | Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
265-357 | 2.25e-09 | |||||
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. Pssm-ID: 462406 [Multi-domain] Cd Length: 94 Bit Score: 54.21 E-value: 2.25e-09
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| PRK08317 | PRK08317 | hypothetical protein; Provisional |
253-358 | 1.27e-06 | |||||
hypothetical protein; Provisional Pssm-ID: 181382 [Multi-domain] Cd Length: 241 Bit Score: 49.55 E-value: 1.27e-06
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| AdoMet_MTases | cd02440 | S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
264-359 | 8.62e-06 | |||||
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 44.34 E-value: 8.62e-06
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| EPS_HpsE | NF038302 | hormogonium polysaccharide biosynthesis glycosyltransferase HpsE; |
10-97 | 8.01e-05 | |||||
hormogonium polysaccharide biosynthesis glycosyltransferase HpsE; Pssm-ID: 439602 [Multi-domain] Cd Length: 307 Bit Score: 44.40 E-value: 8.01e-05
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| BioC | TIGR02072 | malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin ... |
262-419 | 2.52e-03 | |||||
malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, carries out an enzymatic step prior to the formation of pimeloyl-CoA, namely O-methylation of the malonyl group preferentially while on acyl carrier protein. The enzyme is recognizable as a methyltransferase by homology. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin] Pssm-ID: 273953 [Multi-domain] Cd Length: 240 Bit Score: 39.58 E-value: 2.52e-03
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| rADc | smart00650 | Ribosomal RNA adenine dimethylases; |
253-317 | 8.87e-03 | |||||
Ribosomal RNA adenine dimethylases; Pssm-ID: 128898 Cd Length: 169 Bit Score: 37.11 E-value: 8.87e-03
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| Name | Accession | Description | Interval | E-value | |||||
| WcaE | COG1216 | Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]; |
1-239 | 3.01e-53 | |||||
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]; Pssm-ID: 440829 [Multi-domain] Cd Length: 202 Bit Score: 177.49 E-value: 3.01e-53
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| GT_2_like_c | cd04186 | Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ... |
6-212 | 7.90e-49 | |||||
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Pssm-ID: 133029 [Multi-domain] Cd Length: 166 Bit Score: 164.65 E-value: 7.90e-49
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| BcsA | COG1215 | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ... |
3-216 | 6.10e-29 | |||||
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]; Pssm-ID: 440828 [Multi-domain] Cd Length: 303 Bit Score: 115.61 E-value: 6.10e-29
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| Glyco_tranf_GTA_type | cd00761 | Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ... |
6-198 | 8.76e-27 | |||||
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. Pssm-ID: 132997 [Multi-domain] Cd Length: 156 Bit Score: 105.28 E-value: 8.76e-27
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| WcaA | COG0463 | Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ... |
1-217 | 6.90e-26 | |||||
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; Pssm-ID: 440231 [Multi-domain] Cd Length: 208 Bit Score: 104.40 E-value: 6.90e-26
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| Glycos_transf_2 | pfam00535 | Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ... |
5-171 | 2.78e-24 | |||||
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Pssm-ID: 425738 [Multi-domain] Cd Length: 166 Bit Score: 98.62 E-value: 2.78e-24
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| Succinoglycan_BP_ExoA | cd02525 | ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA ... |
5-205 | 5.16e-23 | |||||
ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. Pssm-ID: 133016 [Multi-domain] Cd Length: 249 Bit Score: 97.69 E-value: 5.16e-23
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| CESA_like | cd06423 | CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily ... |
6-186 | 1.46e-19 | |||||
CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan. Pssm-ID: 133045 [Multi-domain] Cd Length: 180 Bit Score: 85.74 E-value: 1.46e-19
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| GT_2_WfgS_like | cd06433 | WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella ... |
5-198 | 5.64e-17 | |||||
WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Pssm-ID: 133055 [Multi-domain] Cd Length: 202 Bit Score: 79.13 E-value: 5.64e-17
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| GT2_RfbF_like | cd02526 | RfbF is a putative dTDP-rhamnosyl transferase; Shigella flexneri RfbF protein is a putative ... |
7-211 | 2.53e-16 | |||||
RfbF is a putative dTDP-rhamnosyl transferase; Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen. Pssm-ID: 133017 [Multi-domain] Cd Length: 237 Bit Score: 78.09 E-value: 2.53e-16
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| Beta4Glucosyltransferase | cd02511 | UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of ... |
5-122 | 2.02e-13 | |||||
UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide; UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core. Pssm-ID: 133005 [Multi-domain] Cd Length: 229 Bit Score: 69.62 E-value: 2.02e-13
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| GT2_RfbC_Mx_like | cd04184 | Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene ... |
5-197 | 2.04e-13 | |||||
Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Pssm-ID: 133027 [Multi-domain] Cd Length: 202 Bit Score: 68.77 E-value: 2.04e-13
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| GT_2_like_e | cd04192 | Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ... |
20-198 | 2.67e-12 | |||||
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Pssm-ID: 133035 [Multi-domain] Cd Length: 229 Bit Score: 66.16 E-value: 2.67e-12
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| UbiG | COG2227 | 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
237-361 | 3.50e-12 | |||||
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 63.11 E-value: 3.50e-12
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| GT2_Chondriotin_Pol_N | cd06420 | N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin ... |
6-211 | 4.03e-12 | |||||
N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix. Pssm-ID: 133042 [Multi-domain] Cd Length: 182 Bit Score: 64.52 E-value: 4.03e-12
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| glyco_like_mftF | TIGR04283 | transferase 2, rSAM/selenodomain-associated; This enzyme may transfer a nucleotide, or it ... |
5-197 | 7.41e-12 | |||||
transferase 2, rSAM/selenodomain-associated; This enzyme may transfer a nucleotide, or it sugar moiety, as part of a biosynthetic pathway. Other proposed members of the pathway include another transferase (TIGR04282), a phosphoesterase, and a radical SAM enzyme (TIGR04167) whose C-terminal domain (pfam12345) frequently contains a selenocysteine. [Unknown function, Enzymes of unknown specificity] Pssm-ID: 275103 [Multi-domain] Cd Length: 220 Bit Score: 64.84 E-value: 7.41e-12
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| CESA_CelA_like | cd06421 | CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of ... |
30-199 | 2.06e-11 | |||||
CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. Pssm-ID: 133043 [Multi-domain] Cd Length: 234 Bit Score: 63.75 E-value: 2.06e-11
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| GT_2_like_b | cd04185 | Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ... |
7-210 | 5.70e-11 | |||||
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Pssm-ID: 133028 [Multi-domain] Cd Length: 202 Bit Score: 61.88 E-value: 5.70e-11
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| Glyco_tranf_2_2 | pfam10111 | Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ... |
33-196 | 3.13e-10 | |||||
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. Pssm-ID: 313356 [Multi-domain] Cd Length: 276 Bit Score: 60.75 E-value: 3.13e-10
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| Glyco_tranf_2_3 | pfam13641 | Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ... |
4-237 | 4.23e-10 | |||||
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. Pssm-ID: 433372 [Multi-domain] Cd Length: 230 Bit Score: 59.69 E-value: 4.23e-10
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| UbiE | COG2226 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ... |
253-372 | 8.90e-10 | |||||
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis Pssm-ID: 441828 [Multi-domain] Cd Length: 143 Bit Score: 56.93 E-value: 8.90e-10
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| GT_2_like_a | cd02522 | GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; ... |
5-192 | 9.38e-10 | |||||
GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Pssm-ID: 133013 [Multi-domain] Cd Length: 221 Bit Score: 58.35 E-value: 9.38e-10
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| PRK10073 | PRK10073 | putative glycosyl transferase; Provisional |
3-108 | 1.92e-09 | |||||
putative glycosyl transferase; Provisional Pssm-ID: 182223 [Multi-domain] Cd Length: 328 Bit Score: 58.90 E-value: 1.92e-09
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| Methyltransf_11 | pfam08241 | Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
265-357 | 2.25e-09 | |||||
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. Pssm-ID: 462406 [Multi-domain] Cd Length: 94 Bit Score: 54.21 E-value: 2.25e-09
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| CESA_NdvC_like | cd06435 | NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase; ... |
34-209 | 9.49e-09 | |||||
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase; NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response. Pssm-ID: 133057 [Multi-domain] Cd Length: 236 Bit Score: 55.87 E-value: 9.49e-09
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| GT_2_like_d | cd04196 | Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ... |
5-113 | 2.14e-08 | |||||
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Pssm-ID: 133039 [Multi-domain] Cd Length: 214 Bit Score: 54.56 E-value: 2.14e-08
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| CESA_like_1 | cd06439 | CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of ... |
5-143 | 3.91e-08 | |||||
CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Pssm-ID: 133061 [Multi-domain] Cd Length: 251 Bit Score: 54.13 E-value: 3.91e-08
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| Glyco_trans_2_3 | pfam13632 | Glycosyl transferase family group 2; Members of this family of prokaryotic proteins include ... |
83-209 | 5.48e-08 | |||||
Glycosyl transferase family group 2; Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis. Pssm-ID: 433365 [Multi-domain] Cd Length: 192 Bit Score: 52.72 E-value: 5.48e-08
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| COG4976 | COG4976 | Predicted methyltransferase, contains TPR repeat [General function prediction only]; |
250-370 | 2.78e-07 | |||||
Predicted methyltransferase, contains TPR repeat [General function prediction only]; Pssm-ID: 444001 [Multi-domain] Cd Length: 181 Bit Score: 50.38 E-value: 2.78e-07
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| pp-GalNAc-T | cd02510 | pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide ... |
34-239 | 3.42e-07 | |||||
pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. Pssm-ID: 133004 [Multi-domain] Cd Length: 299 Bit Score: 51.82 E-value: 3.42e-07
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| Tam | COG4106 | Trans-aconitate methyltransferase [Energy production and conversion]; |
260-358 | 8.41e-07 | |||||
Trans-aconitate methyltransferase [Energy production and conversion]; Pssm-ID: 443282 [Multi-domain] Cd Length: 100 Bit Score: 47.13 E-value: 8.41e-07
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| Glyco_tranf_2_5 | pfam13712 | Glycosyltransferase like family; Members of this family of prokaryotic proteins include ... |
68-239 | 9.21e-07 | |||||
Glycosyltransferase like family; Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis. Pssm-ID: 463964 [Multi-domain] Cd Length: 210 Bit Score: 49.54 E-value: 9.21e-07
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| PRK08317 | PRK08317 | hypothetical protein; Provisional |
253-358 | 1.27e-06 | |||||
hypothetical protein; Provisional Pssm-ID: 181382 [Multi-domain] Cd Length: 241 Bit Score: 49.55 E-value: 1.27e-06
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| DPM_DPG-synthase_like | cd04179 | DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the ... |
34-86 | 1.51e-06 | |||||
DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily. Pssm-ID: 133022 [Multi-domain] Cd Length: 185 Bit Score: 48.34 E-value: 1.51e-06
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| GT2_HAS | cd06434 | Hyaluronan synthases catalyze polymerization of hyaluronan; Hyaluronan synthases (HASs) are ... |
4-206 | 3.15e-06 | |||||
Hyaluronan synthases catalyze polymerization of hyaluronan; Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate. Pssm-ID: 133056 [Multi-domain] Cd Length: 235 Bit Score: 48.02 E-value: 3.15e-06
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| Methyltransf_25 | pfam13649 | Methyltransferase domain; This family appears to be a methyltransferase domain. |
264-353 | 4.82e-06 | |||||
Methyltransferase domain; This family appears to be a methyltransferase domain. Pssm-ID: 463945 [Multi-domain] Cd Length: 96 Bit Score: 44.86 E-value: 4.82e-06
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| AdoMet_MTases | cd02440 | S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
264-359 | 8.62e-06 | |||||
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 44.34 E-value: 8.62e-06
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| MetW | pfam07021 | Methionine biosynthesis protein MetW; This family consists of several bacterial and one ... |
264-384 | 1.25e-05 | |||||
Methionine biosynthesis protein MetW; This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalyzed by the products of the metXW genes and is equivalent to the first step in enterobacteria, gram-positive bacteria and fungi, except that in these microorganizms the reaction is catalyzed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in gram-positive bacteria and certain fungi, the second and third steps are a direct sulfhydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells. Pssm-ID: 399779 Cd Length: 193 Bit Score: 45.91 E-value: 1.25e-05
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| Methyltransf_12 | pfam08242 | Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
265-355 | 1.34e-05 | |||||
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. Pssm-ID: 400515 [Multi-domain] Cd Length: 98 Bit Score: 43.51 E-value: 1.34e-05
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| Methyltransf_23 | pfam13489 | Methyltransferase domain; This family appears to be a methyltransferase domain. |
228-361 | 1.59e-05 | |||||
Methyltransferase domain; This family appears to be a methyltransferase domain. Pssm-ID: 404385 [Multi-domain] Cd Length: 162 Bit Score: 45.11 E-value: 1.59e-05
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| Glyco_transf_21 | pfam13506 | Glycosyl transferase family 21; This is a family of ceramide beta-glucosyltransferases - EC:2. ... |
69-213 | 3.12e-05 | |||||
Glycosyl transferase family 21; This is a family of ceramide beta-glucosyltransferases - EC:2.4.1.80. Pssm-ID: 433264 [Multi-domain] Cd Length: 173 Bit Score: 44.20 E-value: 3.12e-05
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| PLN02726 | PLN02726 | dolichyl-phosphate beta-D-mannosyltransferase |
1-89 | 7.49e-05 | |||||
dolichyl-phosphate beta-D-mannosyltransferase Pssm-ID: 215385 [Multi-domain] Cd Length: 243 Bit Score: 44.30 E-value: 7.49e-05
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| EPS_HpsE | NF038302 | hormogonium polysaccharide biosynthesis glycosyltransferase HpsE; |
10-97 | 8.01e-05 | |||||
hormogonium polysaccharide biosynthesis glycosyltransferase HpsE; Pssm-ID: 439602 [Multi-domain] Cd Length: 307 Bit Score: 44.40 E-value: 8.01e-05
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| Methyltransf_31 | pfam13847 | Methyltransferase domain; This family appears to have methyltransferase activity. |
260-361 | 1.11e-04 | |||||
Methyltransferase domain; This family appears to have methyltransferase activity. Pssm-ID: 463998 [Multi-domain] Cd Length: 150 Bit Score: 42.40 E-value: 1.11e-04
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| DPG_synthase | cd04188 | DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate ... |
34-89 | 1.36e-04 | |||||
DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. Pssm-ID: 133031 [Multi-domain] Cd Length: 211 Bit Score: 42.94 E-value: 1.36e-04
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| beta3GnTL1_like | cd06913 | Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of ... |
6-95 | 1.88e-04 | |||||
Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine ; This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified. Pssm-ID: 133063 [Multi-domain] Cd Length: 219 Bit Score: 42.83 E-value: 1.88e-04
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| DPM1_like_bac | cd04187 | Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes ... |
34-86 | 2.04e-04 | |||||
Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily. Pssm-ID: 133030 [Multi-domain] Cd Length: 181 Bit Score: 42.08 E-value: 2.04e-04
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| TrmN6 | COG4123 | tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) ... |
253-327 | 1.31e-03 | |||||
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) A37 N6-methylase TrmN6 is part of the Pathway/BioSystem: tRNA modification Pssm-ID: 443299 [Multi-domain] Cd Length: 238 Bit Score: 40.13 E-value: 1.31e-03
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| BioC | TIGR02072 | malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin ... |
262-419 | 2.52e-03 | |||||
malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, carries out an enzymatic step prior to the formation of pimeloyl-CoA, namely O-methylation of the malonyl group preferentially while on acyl carrier protein. The enzyme is recognizable as a methyltransferase by homology. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin] Pssm-ID: 273953 [Multi-domain] Cd Length: 240 Bit Score: 39.58 E-value: 2.52e-03
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| PTZ00260 | PTZ00260 | dolichyl-phosphate beta-glucosyltransferase; Provisional |
5-113 | 2.77e-03 | |||||
dolichyl-phosphate beta-glucosyltransferase; Provisional Pssm-ID: 240336 [Multi-domain] Cd Length: 333 Bit Score: 39.75 E-value: 2.77e-03
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| DPM1_like | cd06442 | DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to ... |
6-81 | 6.44e-03 | |||||
DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily. Pssm-ID: 133062 [Multi-domain] Cd Length: 224 Bit Score: 37.90 E-value: 6.44e-03
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| GT2_AmsE_like | cd04195 | GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a ... |
18-198 | 8.65e-03 | |||||
GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Pssm-ID: 133038 [Multi-domain] Cd Length: 201 Bit Score: 37.29 E-value: 8.65e-03
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| rADc | smart00650 | Ribosomal RNA adenine dimethylases; |
253-317 | 8.87e-03 | |||||
Ribosomal RNA adenine dimethylases; Pssm-ID: 128898 Cd Length: 169 Bit Score: 37.11 E-value: 8.87e-03
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