|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 728.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 1 MLKIIIPTMTLIPLTILSPRKHLWTNITLYSLLIATISLQWLTPTYYPSKSLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 81 QNHLEQEPINRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 161 LITILHLHNQIGTLYLPMLKLSHPTLNSSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 241 YGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAI 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2260392552 401 LLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELISGI 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 602.29 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 1 MLKIIIPTMTLIPLTILSPRKHLWTNITLYSLLIATISLQWLTPTYYPSKSLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 81 QNHLEQEPINRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 161 LITILHLHNQIGTLYLPMLKLSHPTLNSSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 241 YGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAI 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2260392552 401 LLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELISGI 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 591.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 1 MLKIIIPTMTLIPLTILSPRKHLWTNITLYSLLIATISLQWLTPTYYPSKSLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 81 QNHLEQEPINRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 161 LITILHLHNQIGTLYLPMLKLSHPTLNSSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 241 YGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAI 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2260392552 401 LLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELISGI 457
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGP 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
8.46e-177 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 502.95 E-value: 8.46e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 1 MLKIIIPTMTLIPLTILSPRKHLWTNITLYSLLIATISLQWLT-PTYYPSKSLTPWTSIDQISSPLLVLSCWLLPLMIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 80 SQNHLEQEPINRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 160 LLITILHLHNQIGTLYLPMLKLSHPTLNSSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 240 GYGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 320 GLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2260392552 400 ILLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELISG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
4.90e-160 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 460.18 E-value: 4.90e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 3 KIIIPTMTLIPLTILSPRKHLWTNITLYSLLIATISLQWL-TPTYYPSKSLTPWTSIDQISSPLLVLSCWLLPLMIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFkWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 82 NHLEQEPINRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 162 ITILHLHNQIGTLYLPMLKLSHPTlnsSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 242 GIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 322 TSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAIL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2260392552 402 LTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
3.93e-145 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 422.46 E-value: 3.93e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 1 MLKIIIPTMTLIPLTILSPRKHLWTNITLYSLLIATISLQWLTPTYYPSKSLTPWT-SIDQISSPLLVLSCWLLPLMIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSlATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 80 SQNHLEQEPINRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 160 LLITILHLHNQIGTLYLPMLKLSHPTLNSSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 240 GYGIMR-VTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMIS 318
Cdd:MTH00044 241 GYGLIRlINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 319 HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGA 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2260392552 399 AILLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELIS 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
4.85e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 352.53 E-value: 4.85e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 1 MLKIIIPTMTLIPLTILSprKHLWTNITLYSLLIATISLQWLTPTYYPSKSLtpWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLK--NSWWLVQSLLFLLSFLFMLLFSLSFYFSNISY--FFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 81 QNHLEQepINRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00163 77 ESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 161 LITILHLHNQIGTLYLPMLKlshptlNSSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLN------FFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 241 YGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAI 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2260392552 401 LLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
51-457 |
1.09e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 332.96 E-value: 1.09e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 51 SLTPWTSIDQISSPLLVLSCWLLPLMIMASQNhlEQEPINRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTL 130
Cdd:MTH00150 15 SLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 131 ILITRWGSQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPTLNSSWSdlaASLALLLAFMVKAPLY 210
Cdd:MTH00150 93 LLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGL---WGLLVFLAFLVKLPMY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 211 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSS 290
Cdd:MTH00150 170 PFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 291 ISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALP 370
Cdd:MTH00150 250 VGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 371 PTTNLMAELTIVIALFNWSAFTIILTGAAILLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILK 450
Cdd:MTH00150 330 PSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILK 409
|
....*..
gi 2260392552 451 PELISGI 457
Cdd:MTH00150 410 SDLLFMW 416
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.02e-108 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 329.01 E-value: 1.02e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 1 MLKIIIPTMTLIPLTILSpRKHLWTNITLYSLLIATISLQWLTPTYYPSKSLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIK-YPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 81 QNHLEQEpiNRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00014 80 FKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 161 LITILHLHNQIGTLYLPMLKLSHPTLNSSwsdLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 241 YGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAI 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2260392552 401 LLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELIS 455
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
2.03e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 312.68 E-value: 2.03e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 57 SIDQISSPLLVLSCWLLPLMIMASQNHLEQEpiNRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:MTH00205 54 SFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGW 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 137 GSQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLylpMLKLSHPTLNSSWSDLAASLALLLAFMVKAPLYGLHLWL 216
Cdd:MTH00205 132 GYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSL---SMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGL 296
Cdd:MTH00205 209 PKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 297 VVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLM 376
Cdd:MTH00205 289 MVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLA 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2260392552 377 AELTIVIALFNWSAFTIILTGAAILLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELI 454
Cdd:MTH00205 369 SEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-397 |
1.06e-72 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 231.05 E-value: 1.06e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 112 ASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPTLNSSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 192 DLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYPFITLALWGALM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 272 TSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLA-NTNYERTHSRILLLTRGLQP 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2260392552 351 LLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTG 397
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAG 287
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
58-457 |
7.12e-70 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 229.58 E-value: 7.12e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 58 IDQISSPLLVLSCWLLPLMIMASQNHLEqepiNRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:COG1008 80 VDGISLPLVLLTALLTPLAILASWNEIK----KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 138 SQsERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPTLNSSWSdLAASLALLLAFMVKAPLYGLHLWLP 217
Cdd:COG1008 156 GE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQ-LLLFLAFFIAFAVKVPMFPFHTWLP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHP-PSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGL 296
Cdd:COG1008 234 DAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 297 VVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLM 376
Cdd:COG1008 314 VLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFV 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 377 AELTIVIALFNWSAFTIILTGAAILLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELISG 456
Cdd:COG1008 394 GEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLD 473
|
.
gi 2260392552 457 I 457
Cdd:COG1008 474 L 474
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-411 |
2.16e-59 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 202.09 E-value: 2.16e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 57 SIDQISSPLLVLSCWLLPLMIMASQNHLEqepiNRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 137 GSQsERLNAGIYLLFYTLASSLPLLITILHLHNQIG--TLYLPMLKLSHPTLNSSWsdlaASLALLLAFMVKAPLYGLHL 214
Cdd:TIGR01972 150 GGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgtFDLLELLNLPLPFGVQTW----LFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYPFI-TLALWGALMTSAICLRQTDLKSLIAYSSISH 293
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLaALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 294 MGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTT 373
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 2260392552 374 NLMAELTIVIALFNWSAFTIILTGAAILLTASYTLYML 411
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
58-449 |
2.68e-59 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 201.97 E-value: 2.68e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 58 IDQISSPLLVLSCWLLPLMIMASQNHLEQepiNRKRIFASTIILAQLfILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:PRK05846 80 VDGISLLLVVLTALLTPLAVLASWEEIKK---RVKFYMAALLWLEGG-VIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 138 SqSERLNAGIYLLFYTLASSLPLLITILHL----HNQIGT---LYLPMLKLSHPTLNSSWsdlaasLALLLAFMVKAPLY 210
Cdd:PRK05846 156 G-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTfdiADLLNLPLPPGVQYWLF------LAFFIAFAVKMPMF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 211 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHP-PSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYS 289
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 290 SISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMAL 369
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 370 PPTTNLMAELTIVIALFNWSAFTIILTGAAILLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMAlhmiPMMLLIL 449
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILL----PLVALLL 464
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
2.43e-58 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 199.13 E-value: 2.43e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 57 SIDQISSPLLVLSCWLLPLMIMASQN---HLEQEpinrkriFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILI 133
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLI 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 134 TRWGSQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTL-YLPMLKLSHPTLNSSWsdlaASLALLLAFMVKAPLYGL 212
Cdd:MTH00204 153 GIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKW----LLVGFFLSLAVKIPQIPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYPFITL-----ALWGALMTSaiclRQTDLKSLIA 287
Cdd:MTH00204 229 HIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMlsviaVIYGSLTTC----RQVDFKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 288 YSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNM 367
Cdd:MTH00204 305 YSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANM 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 368 ALPPTTNLMAELTIVIALFNWSAFTIILTGAAILLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLL 447
Cdd:MTH00204 385 GFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLL 464
|
....*..
gi 2260392552 448 ILKPELI 454
Cdd:MTH00204 465 GIVPFII 471
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
1.21e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 184.74 E-value: 1.21e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 57 SIDQISSPLLVLSCWLLPLMIMASQNHLEQepinRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 137 GSQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTL-YLPMLKLSHptLNSSWSDLAASLALLLAFMVKAPLYGLHLW 215
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCSH--VVSEQTQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHP-PSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHM 294
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 295 GLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTN 374
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 375 LMAELTIVIALFNWSAFTIILTGAAILLTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELI 454
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFI 492
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
58-410 |
3.06e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 177.55 E-value: 3.06e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 58 IDQISSPLLVLSCWLLPLMIMASQNHLeqepinrkRIFASTIILAQLFI--LL--AFSASELMLFYIAFEATLIPTLILI 133
Cdd:MTH00217 78 VDGISIFFLILTALLTPICILISWNSI--------KFLIKEFLLCLLVIeiLLmgVFTILDLVGFYILFEGILIPMFLII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 134 TRWGSQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTL-YLPMLKLShptLNSSWSdLAASLALLLAFMVKAPLYGL 212
Cdd:MTH00217 150 GIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTdYQALCCLK---IEKELQ-YFIFLGFFLSLAIKIPKIPF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYPFI-TLALWGALMTSAICLRQTDLKSLIAYSSI 291
Cdd:MTH00217 226 HIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 292 SHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:MTH00217 306 AHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPL 385
|
330 340 350
....*....|....*....|....*....|....*....
gi 2260392552 372 TTNLMAELTIVIALFNWSAFTIILTGAAILLTASYTLYM 410
Cdd:MTH00217 386 SCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
104-412 |
9.82e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 158.15 E-value: 9.82e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 104 LFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPLLITILHlhnqigtlYLPMLKLSH 183
Cdd:MTH00094 73 LICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSLCY 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 184 PTLNSSWsdlAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLhypFIT 263
Cdd:MTH00094 145 FDFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNF---WII 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 264 LALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILL 343
Cdd:MTH00094 219 FSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIY 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2260392552 344 LTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAILLTASYTLYMLM 412
Cdd:MTH00094 299 FMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-411 |
6.86e-40 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 149.80 E-value: 6.86e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 57 SIDQISSPLLVLSCWLLPLMIMASQNhleqepINRK-RIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITR 135
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWK------VTRKpRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 136 WGSQsERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPTLnSSWSDLAASLALLLAFMVKAPLYGLHLW 215
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSY-PLALELLLYAGFLIAFGVKLPIFPLHTW 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYP-FITLA----LWGALMTSAiclrQTDLKSLIAYSS 290
Cdd:PRK12561 208 LPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGvvniIYGALNAFA----QDNVKRRLAYSS 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 291 ISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALP 370
Cdd:PRK12561 284 VSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALP 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2260392552 371 PTTNLMAELTIVIALFNWSAF-------TIILTGAAILLTASYTLYML 411
Cdd:PRK12561 364 GMSGFVSELTVFLGITSSDVYsstfrtiTILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-412 |
6.01e-38 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 142.98 E-value: 6.01e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 58 IDQISSPLLVLSCWLLPLMIMASQNHLEQEPinRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 138 SQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPTLNSSWSdLAASLALLLAFMVKAPLYGLHLWLP 217
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLL-LAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPP--SNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMG 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGAdpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 296 LVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNL 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350
....*....|....*....|....*....|....*..
gi 2260392552 376 MAELTIVIALFNWSAFTIIltgAAILLTASYTLYMLM 412
Cdd:COG0651 390 VSKWLLLQAALEAGAWLLA---AVLLLSSLLTLAYFV 423
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-457 |
8.59e-33 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 130.21 E-value: 8.59e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 59 DQISSPLLVLSCWLLPLMIMASQnhleqePINRK-RIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:PRK02546 86 DGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 138 SQsERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPTLNSSWSdLAASLALLLAFMVKAPLYGLHLWLP 217
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYP-FITLALWGALMTSAICLRQTDLKSLIAYSSISHMGL 296
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 297 VVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLM 376
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 377 AELTIVIALFNWSAFT-------IILTGAAILLTASYTLYMLMMTQRGTLPSHITSIQN---SSTREHLLMALHMIPMML 446
Cdd:PRK02546 398 AELMVFVGFATSDAYTlpfrvvvVFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEKlvdAEPREVFIIACLLVPIIG 477
|
410
....*....|.
gi 2260392552 447 LILKPELISGI 457
Cdd:PRK02546 478 IGLYPKLVTQS 488
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-426 |
1.93e-32 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 129.05 E-value: 1.93e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 57 SIDQISSPLLVLSCWLLPLMIMASQnhleqEPINRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 137 GSQsERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPTLNSSwSDLAASLALLLAFMVKAPLYGLHLWL 216
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYPFI-TLALWGALMTSAICLRQTDLKSLIAYSSISHMG 295
Cdd:PRK06473 229 PDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 296 LVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL---QPLLPLMATWWLLANLTNMALPPT 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2260392552 373 TNLMAELTIVIALFNWSAFTIILTGAAILLTASYTLYMLMMTQRGTLPSHITSI 426
Cdd:PRK06473 389 VGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
58-422 |
5.94e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 124.82 E-value: 5.94e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 58 IDQISSPLLVLSCWLLPLMIMASQnhleqEPINRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:PRK07363 77 VDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 138 SQsERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPTLNSSwSDLAASLALLLAFMVKAPLYGLHLWLP 217
Cdd:PRK07363 152 GE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYPfiTLALWGA---LMTSAICLRQTDLKSLIAYSSISHM 294
Cdd:PRK07363 230 DAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisvIYGALSAIAQKDIKRMVAYSSIGHM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 295 GLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL-QPL--LPLMATWWLLANLTNMALPP 371
Cdd:PRK07363 308 GYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMASAGIPG 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2260392552 372 TTNLMAELTIVIALFNWSAFTIILTGAAILLTASYTLYMLMMTQRGTLPSH 422
Cdd:PRK07363 388 LVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-411 |
2.06e-25 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 108.49 E-value: 2.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 110 FSASELMLFYIAFEATLIPTLILITRWGSQsERLNAGIYLLFYTLASSLPLLItilhlhnqiGTLYLPMLKLSHPTLNSS 189
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLI---------GVLGMGLYGSNEPTLNFE 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 190 WS---------DLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYP 260
Cdd:CHL00011 199 TLanqsypvalEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSP 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 261 FitLALWGALM---TSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERT 337
Cdd:CHL00011 279 W--LVIVGAIQiiyAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 338 HSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIA-------LFNWSAFTIILTGAAILLTASYTLYM 410
Cdd:CHL00011 357 RLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGiitsqkyLLMPKILITFVMAIGMILTPIYLLSM 436
|
.
gi 2260392552 411 L 411
Cdd:CHL00011 437 L 437
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
6.04e-24 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 96.05 E-value: 6.04e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 1 MLKIIIPTMTLIPLTILSPRKHLWTNITLYSLLIATISLQWLT-PTYYPSKSLTPWTSIDQISSPLLVLSCWLLPLMIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2260392552 80 SQNHLEQEPINRKRIFASTIILAQLFILLA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-449 |
2.38e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 96.58 E-value: 2.38e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 58 IDQISSPLLVLSCWLLPLMIMASQNHLEQEpiNRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 138 SQSERLNAGI-YLLFYTLASSLpLLITILHLHNQIGTLYLPMLKL----------SHPTLNSSWSDLAASLALLLAFMVK 206
Cdd:PRK12667 158 DRGDAVEAAIkYALIGAVGTTL-YFLALAFLYATFGTLNMADLSAkirglsfpltGGLAGNPPLALGVALALALWAFTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 207 APLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYP-------FITLALWGALMTSAICLRQ 279
Cdd:PRK12667 237 AAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFraalspiLIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 280 TDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWW 359
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 360 LLANLTNMALPPTTNLMAELTIVIALFNWSaftIILTGAAILLTASYTL--YM--LMMTQRGTLPSHitsiQNSSTREHL 435
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISLvgYFraWYSLFFGKPKSG----EEVEHKESP 469
|
410
....*....|....
gi 2260392552 436 LMALHMIPMMLLIL 449
Cdd:PRK12667 470 SMSVVILVLALAVL 483
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-406 |
8.38e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 88.78 E-value: 8.38e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 109 AFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLpLLITILHLHNQIGTLYLPMLK---LSHPT 185
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTF-LLIGVGLLYGVTGTLNMADLAgalAENPT 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 186 LNsswsdlAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSN----NLHYPF 261
Cdd:PRK08375 201 VV------TAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFrfalGLGWLL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 262 ITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:PRK08375 275 AVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRR 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2260392552 342 LLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALF---NWSAFTIILtgAAILLTASY 406
Cdd:PRK08375 355 LSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVeagQWLVLAVLL--ASSLLALLY 420
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
10-386 |
4.70e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 77.46 E-value: 4.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 10 TLIPLTILSPRKHLWTNI------TLYSLLIATISLQWLTPTYYPSKSLTPWTSI----DQISSPLLVLSCWLLPLMIMA 79
Cdd:PRK08667 17 AVIPLVFRHKRKRVWQSVlwlviaIALLLFAGSLQLFTGNPLDIPLWGIAPGLDItfhiDRLAAFFIILIGLVSLCVAIY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 80 SQNHLEQEPINRKRIFASTIILAQLFILLAFSASELMLFYIAF-EATLIPTLILITRWGSQSERLNAGIYLLFYTLASSL 158
Cdd:PRK08667 97 SLGYNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFwEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTV 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 159 PLLITILHLHNQIGTLYLPMLKLSHPTLNSSWsdlaasLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKL 238
Cdd:PRK08667 177 FLMLGIIVLFIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 239 GGYGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLV-----------VAATMIQTQW 307
Cdd:PRK08667 251 AVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIlmgiglyvifgVYGLDTLALL 330
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2260392552 308 AFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALF 386
Cdd:PRK08667 331 ALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
103-449 |
5.12e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 76.89 E-value: 5.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 103 QLFI---LLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPLLITIL---HLHNQIG---- 172
Cdd:PRK06458 115 QLFLftmLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILvyaNAATVMGdgem 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 173 ----TLYLPMLKLSHPTLNSswsdlAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTI 248
Cdd:PRK06458 195 ailwTELLKHASLLDPTLMK-----LAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYI 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 249 LV--HPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSML 326
Cdd:PRK06458 270 LIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAI 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 327 FCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFN---WSAFTIILTGAAILLT 403
Cdd:PRK06458 350 FFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFA 429
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2260392552 404 AsytlyMLMMTQRGTLPSHitsiqNSSTREHLLMALHMIPMMLLIL 449
Cdd:PRK06458 430 A-----LVRRVAGMVFGEP-----PEAVNRGDLGWLTTSPMFVHLV 465
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-406 |
6.97e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 76.53 E-value: 6.97e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 90 NRKRIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITrWGSQSERLNAGIYLLFYTLASSLPLLITILHLHN 169
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 170 QIGTLYLPMLKLSHPTlnsswsdlaASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTIL 249
Cdd:PRK07234 170 ANGTFAFSGLATADPE---------AFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 250 VhppsNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIqtqwafsgAMILMISHGLTSSMLFCL 329
Cdd:PRK07234 241 V----PGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2260392552 330 ANTNYERTHSRILLLTRGLQPLLPLmatwwLLANLTNMALPPTTNLMAELTIVIALFNWsaFTIILTGAAILLTASY 406
Cdd:PRK07234 309 AGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPW--QAIALNLAAVGTAASF 378
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
106-407 |
5.65e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 71.23 E-value: 5.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 106 ILLAFSASELMLFYIAFEATLIPTLILITRWGSQSErlNAGIYLLFYTLASSLPLLITILHLHNQIGTLylpmlKLSHPT 185
Cdd:PRK12650 123 MLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTT-----SLSGIL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 186 LNSSWSDLAASLALLLAFMV-----KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHppsNNL--H 258
Cdd:PRK12650 196 HSDVWAEKPGLTTVVAVLIAvaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH---DVAvwN 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 259 YPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTH 338
Cdd:PRK12650 273 WLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAG 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2260392552 339 SRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFN--WSAFTIILTGAAILLTASYT 407
Cdd:PRK12650 353 TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEapGGNAGVVLLLVGAALGAVFT 423
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-409 |
1.69e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 69.23 E-value: 1.69e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 59 DQISSPLLVLSCW-LLPLMIMASQNHL----EQEPINrkrIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILI 133
Cdd:PRK12665 75 DRLSALMLVVSSVvLLAVLVYAIGQGIrdgdEEQPVS---IFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 134 TRWGSqSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPTLnSSWSDLAASLALLLAFMVKAPLYGLH 213
Cdd:PRK12665 152 TLGAT-AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDEL-PSGTRTALFAVLLVAFGIKAAVFPLS 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPpsnnlHYPFITLALWGALMTSAI----CLRQTDLKSLIAYS 289
Cdd:PRK12665 230 FWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-----GGGLDTLLMVVALLTMVVgilgAIAQSDIKRLLSFT 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 290 SISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMAL 369
Cdd:PRK12665 305 LVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGI 384
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2260392552 370 PPTTNLMAELTIVIA-LFNWSAFTIILTGAAIlLTASYTLY 409
Cdd:PRK12665 385 PPFSGFIGKVALLEAgAEDGTWLAWALVAGGV-VTSLLTLY 424
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
261-401 |
1.85e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 69.56 E-value: 1.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 261 FITLALWGA---LMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERT 337
Cdd:PRK12647 259 QTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHET 338
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2260392552 338 HSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAIL 401
Cdd:PRK12647 339 GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
72-395 |
1.66e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 65.71 E-value: 1.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 72 LLPLMI-MASQNHLEQEPINRKRIFastIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLL 150
Cdd:MTH00062 52 LLVLFLgLYSQVMFYNLLSGVSRFF---LFLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 151 FYTLASSLPLLITILHLHNQIGTLYlpmlkLSHPTLNSSWSdLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSML 230
Cdd:MTH00062 129 GYLLLTSLPLLLCLLYLSLVNGSFN-----FSDWGSDDSVS-LIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 231 LAALLLKLGGYGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLrqtDLKSLIAYSSISHMglVVAATMIQTQWAFS 310
Cdd:MTH00062 203 LSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHI--LVPVLGLFVGDWSS 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 311 GAMILMIS--HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNW 388
Cdd:MTH00062 278 INLSFFYClgHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGV 357
|
....*..
gi 2260392552 389 SAFTIIL 395
Cdd:MTH00062 358 LVYLLFW 364
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-407 |
1.81e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.89 E-value: 1.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 95 FASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGI-YLLFYTLASSLpLLITILHLHNQIGT 173
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSM-VLLGIALLYGQYGT 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 174 LYLPMLKlSHPTLNSSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIMRVTILVHPP 253
Cdd:PRK08376 202 LNMAYLA-VKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLFSIYGP 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 254 SNNLH---YPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMG---------LVVAATMIQTQW---AFSGAMILMIS 318
Cdd:PRK08376 280 AINLAtvgWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYgeiALAGGIYHIVN 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 319 HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIV--IALFN--WSAFTII 394
Cdd:PRK08376 360 HALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFNpiLGVIAMI 439
|
330
....*....|...
gi 2260392552 395 LTgaaILLTASYT 407
Cdd:PRK08376 440 GS---VLTLASFV 449
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-412 |
4.66e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.78 E-value: 4.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 93 RIFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWgSQSERLNAGIYLLFYTLASSLPLLITILHL----H 168
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAALKYIFIASTAMIFAFIGLIFLfsltR 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 169 NQIGTLYLPMLKL-SHPTLNSSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVT 247
Cdd:PRK08676 181 QALGTGTLNWTELaAHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLS 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 248 ILVHPPSNNLHYPFITLALwGALMTSAIC---LRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSS 324
Cdd:PRK08676 261 ALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKS 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 325 MLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAILLTA 404
Cdd:PRK08676 340 GLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAA 419
|
....*...
gi 2260392552 405 SYTLYMLM 412
Cdd:PRK08676 420 SSFAIFLL 427
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
203-449 |
1.06e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 63.63 E-value: 1.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPS--NNLHYPFITLALWGALMTSAICLRQT 280
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQK 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 281 DLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWL 360
Cdd:PRK08377 296 NVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALT 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 361 LANLTNMALPPTTNLMAELTIVIALFN--WSAFTIILTGAAILLTASYTLYMLMMTQRGtlpshitsiQNSSTREHLLMA 438
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRIILAGLSagYTWPVALVLGASVVEAVYYFRLIHTMWFKG---------EGERIRENAAIG 446
|
250
....*....|.
gi 2260392552 439 LHMIPMMLLIL 449
Cdd:PRK08377 447 IILLLLAALIV 457
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
262-423 |
4.15e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 61.71 E-value: 4.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 262 ITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQtqwAFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRD 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 342 LLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAIL---LTASYTLYMLMMT---- 414
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgk 435
|
....*....
gi 2260392552 415 QRGTLPSHI 423
Cdd:COG1009 436 PRPKTPKHP 444
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
112-448 |
5.35e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 61.69 E-value: 5.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 112 ASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLP-MLKLSHPTLNSSW 190
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeILGQADHIKNHGL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 191 SDLAASLALLLAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRVTILVHPpSNNLHYPFITLALWGA 269
Cdd:PRK12646 209 FIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLGL-SNMYIYIVTFVGLITM 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 270 LMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFS--------------GAMILMISHGLTSSMLFCLANTNYE 335
Cdd:PRK12646 286 LFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHqqdaiasiyvfvlfAALFHLMNHAIFKCALFMGVGIIDH 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 336 RTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAE---LTIVIALFNWSAFTIILTGA-------AILLTAS 405
Cdd:PRK12646 366 EAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKemfLDALTQTGQLSQFSLISMIIivfigviASIFTFT 445
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2260392552 406 YTLYMLMMTQRGtlPSHITSIQNSSTREHLLMALHMIPMMLLI 448
Cdd:PRK12646 446 YALYMVKEVFWG--KYDSKVFTKKNIHEPWLFSLPSLILMVLV 486
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-412 |
3.57e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 58.81 E-value: 3.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 109 AFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLpLLITILHLHNQIGTLylPMLKLSHPTLNS 188
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAF-FVVAVAILYSVVGTL--NMADISVKIAEL 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 189 SWSDLAASLALLLAFMV----KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRV-TILVHPPSNNLHYPFIT 263
Cdd:PRK07691 201 SAGQTGLITVVAILFLFvfatKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILI 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 264 LALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILL 343
Cdd:PRK07691 281 LALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLK 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2260392552 344 LTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIiltGAAILLTASYTLYMLM 412
Cdd:PRK07691 361 KMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVS---GIIVLLSSLLVLYSVI 426
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-421 |
5.72e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 57.90 E-value: 5.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 106 ILLAFSaSELMLFYIAFEATLIPTLILITrWGSQSERLNAGI-YLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLShp 184
Cdd:PRK06589 130 VLIALS-SDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLF-- 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 185 tlnsSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSN-----NLHY 259
Cdd:PRK06589 206 ----SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYlqrifAEFN 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 260 PFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHS 339
Cdd:PRK06589 282 WLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKE 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 340 RILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWS--AFTIILTGAAILLTASYTLYMLMMTQRG 417
Cdd:PRK06589 362 DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqpWLSIIVMLVVIASSILSALYLLKILSSI 441
|
....
gi 2260392552 418 TLPS 421
Cdd:PRK06589 442 YKPS 445
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
203-371 |
5.82e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 58.36 E-value: 5.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTI-LVHPPSNNLHYPFITLALWGALMTSAICLRQTD 281
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHD 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 282 LKSLIAYSSISHMGLVVAA---TMI--------QTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQP 350
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIR 379
|
170 180
....*....|....*....|.
gi 2260392552 351 LLPLMATWWLLANLTNMALPP 371
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPP 400
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-396 |
8.35e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.44 E-value: 8.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVT--------ILVHPPSNNLhypFITLALWGALMTSAIC 276
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkanfVFTTLPFNNV---FMILAALAIVFGSVLA 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 277 LRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANT---NYERTHSRILLltrGLQPLLP 353
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSMP 374
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2260392552 354 LMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILT 396
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV 417
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-412 |
1.30e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 56.88 E-value: 1.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 109 AFSASELMLFYIAFEATLIPTLILITrWGSQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPTLNS 188
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 189 SWSDLAASLALLLAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYPFITLALWG 268
Cdd:PRK12663 203 TATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 269 ALMTSAI-CLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRG 347
Cdd:PRK12663 282 TMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGG 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2260392552 348 LQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIIltgAAILLTASYTLYMLM 412
Cdd:PRK12663 362 LYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILL---ALMLITSLITMYSLF 423
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
205-327 |
1.54e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 56.93 E-value: 1.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG-IMRVTILvhpPSNNLHYPFIT----------LALWGAL--- 270
Cdd:PRK08668 208 AKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfLLVLYVL---PGTKLFSEFGTyrgvplfnyiLAWLGNIsii 284
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 2260392552 271 MTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLF 327
Cdd:PRK08668 285 VGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-398 |
2.55e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 56.11 E-value: 2.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 2 LKIIIPTMTLIPLTILSPRKHLWTNITLYSLLIATISLQWLTPTYYPSKSLTPWT-----SIDQISSPLLVLSCWLLPLM 76
Cdd:TIGR01770 10 LLLGAFILLLYGLFYSRKKRNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSffivdNFALLIKLILLLSTLLTFFF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 77 imaSQNHLEQEPINRKRiFASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGI-YLLFYTLA 155
Cdd:TIGR01770 90 ---ALSYLSKEKINKFE-FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 156 SSLpLLITILHLHNQIGTLYL-PMLKLSHPTLNSSWSDLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAAL 234
Cdd:TIGR01770 166 SGL-LLFGISLIYGFTGSLNFeDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 235 LLKLGGYGIMRVTILV-HPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAM 313
Cdd:TIGR01770 245 PKIAIFAVFLRLFLYIlFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 314 ILMISHGLTS----SMLFCLANTNYERTHSriLLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFN-- 387
Cdd:TIGR01770 325 FYIFIYALMSlgafGVLSLLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKsg 402
|
410
....*....|...
gi 2260392552 388 --WSAFTIILTGA 398
Cdd:TIGR01770 403 lyWLAVIAVLTSV 415
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
20-323 |
1.10e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.89 E-value: 1.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 20 RKHLWTNITLYSLLIATISLQWLTPTYYPSkSLTPWTSIDQISSPLLVLSCWLLPLMIMASQNHLEQEPINRkRIFASTI 99
Cdd:COG1007 31 SRRLLAGLALLGLLLALALLLLALGGGTGT-AFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLR-GEFYALL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 100 ILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGI-YLLFYTLASSLpLLITILHLHNQIGTLYLP- 177
Cdd:COG1007 109 LFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLLYGATGSLNLAg 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 178 -MLKLSHPTLNSswsdlaASLALLLAFMV-----KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVH 251
Cdd:COG1007 188 iAAALAAGGANS------PLLLLGLVLVLaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAF 261
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2260392552 252 PP-SNNLHYPFITLA----LWGALMTsaicLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTS 323
Cdd:COG1007 262 PGlAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
212-402 |
7.56e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 48.05 E-value: 7.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 212 LHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKS 284
Cdd:PRK06525 226 FYSWLPDA-MEAPTpasaylhAASMVKV------GVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKR 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 285 LIAYSSISHMGLVVAATMIQ---TQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLL 361
Cdd:PRK06525 299 LLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCV 378
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 2260392552 362 ANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAILL 402
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-380 |
2.22e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 46.88 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 59 DQISSPLLVLSCWLLPLMIMASQNHLEQEPiNRKRIFASTIILAQLFILLAFSASELMLFyIAFEATLIPTLILITRWGS 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDP-HVPRFLCYLSLFTFLMMVLVTSDNYLQLF-IGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 139 QSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLK---LSHPTLNSSWSDLAASLALLLAFMV---------- 205
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 206 -KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMrvtILVHPPSNNLHYPFITLALWGAL---MTSAICLRQTD 281
Cdd:MTH00032 237 gKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLM---IRSFPLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 282 LKSLIAYSSISHMGLVVaaTMIQTQWAFSGAMILMISHGLTSSMLFCLA-----NTNYERTHSRILlltRGLQPLLPLMA 356
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTY 387
|
330 340
....*....|....*....|....*....
gi 2260392552 357 TWWLLANLTNMALPPTT-----NLMAELT 380
Cdd:MTH00032 388 TMMLIGSFSIMGLPYLTgfyskDLILELT 416
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
277-323 |
2.27e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 46.74 E-value: 2.27e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2260392552 277 LRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-330 |
2.34e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 46.77 E-value: 2.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 203 FMVKAPLYGLHLWLPKAHVEA--PIAGSMllaALLLKLGGYGIMRVTILVHPPSNNLHYPFITLALW-GALMTSAI---- 275
Cdd:PRK12666 220 FLIKAAMWPLNFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLpGGLATLAFgaig 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2260392552 276 CLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12666 297 VLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
256-371 |
3.46e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.18 E-value: 3.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 256 NLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYE 335
Cdd:PRK06277 264 SAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSY 343
|
90 100 110
....*....|....*....|....*....|....*.
gi 2260392552 336 RTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK06277 344 RTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-401 |
4.77e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.51 E-value: 4.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 106 ILLAFSASELMLFyIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYLPMLKLSHPT 185
Cdd:PRK12649 125 IGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSEL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 186 LNSSWSDLAASLALLLAFM---VKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRVtilvHPPSNNLHYPF 261
Cdd:PRK12649 204 IENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGvYLVARI----HPIFSGTEAWF 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 262 ITLALWG---ALMTSAICLRQTDLKSLIAYSSISHMGLVVA----ATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNY 334
Cdd:PRK12649 279 ILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTmygyTTYHEPGLGVAAATFHLLNHATFKACLFLVAGIVA 358
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2260392552 335 ERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMA-----ELTIVIALFNWSAFTIILTGAAIL 401
Cdd:PRK12649 359 HEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSkemfyETSVEMGALIGGPFTIIIPAVAVL 430
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-449 |
5.09e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 42.37 E-value: 5.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 95 FASTIILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQSERLNAGIYLLFYTLASSLPLLITILHLHNQIGTL 174
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 175 YLPMLKLSHPTLNSSwSDLAASLALLLAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRVTILVHPP 253
Cdd:MTH00020 193 DFSSVFNMVVSAPSS-DITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIRSSPLFEQA 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 254 SNNLHYPFITLALwGALMTSAICLRQTDLKSLIAYSSISHMGLVVAATMIQTqwaFSGAMILMISHGLTSSMLFCLANT- 332
Cdd:MTH00020 271 PLALIIVTIVGSL-TVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSv 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 333 ----NYERTHSRIllltRGLQPLLPLMATWWLLANLTNMALPPTTNLMA-ELTIVIALF-NWSAFTIILTGAAILLTASY 406
Cdd:MTH00020 347 ihalSDEQDMRKM----GGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSkDLILELAFGqYYLIFAYWLGCFSALLTAFY 422
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2260392552 407 TLYMLmmtqrgtlpsHITSIQNSSTREHLLMALH------MIPMMLLIL 449
Cdd:MTH00020 423 SIRLI----------YLTFLSNTNLKKAVFFHLHegdwnlLLPLGILAL 461
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
212-390 |
7.79e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 41.74 E-value: 7.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVHPPSNNLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSI 291
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 292 SHMGLVV-----AATMIQTQ------WAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWL 360
Cdd:PRK08042 279 ENIGIILlglgaGVTGIALEqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAML 358
|
170 180 190
....*....|....*....|....*....|
gi 2260392552 361 LANLTNMALPPTTNLMAELTIVIALFNWSA 390
Cdd:PRK08042 359 VGLMAMAALPPLNGFAGEWVIYQSFFKLSN 388
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
277-411 |
3.52e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 39.91 E-value: 3.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 277 LRQTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMA 356
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLA 365
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2260392552 357 TWWLLANLTNMALPPTTNLMAELTIVIALFNWSAF----TIILTGAAI--LLTASYTLYML 411
Cdd:PRK12644 366 VVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIVLgsILTVAYSLRFL 426
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
203-327 |
8.11e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 38.72 E-value: 8.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260392552 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVtilvhppsnnlhYP-FITLALWGALMT--SAI-CLR 278
Cdd:PRK12668 193 FGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARA------------FPgTELLIYIGAAMAvyGVFfALL 260
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2260392552 279 QTDLKSLIAYSSISHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLF 327
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| |
