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Conserved domains on  [gi|2264345045|gb|UTB60225|]
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guanylate kinase, partial [Staphylococcus lugdunensis]

Protein Classification

guanylate kinase( domain architecture ID 10011364)

guanosine monophosphate kinase (GMPK), also known as guanylate kinase (GKase)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
gmk PRK00300
guanylate kinase; Provisional
1-147 2.92e-85

guanylate kinase; Provisional


:

Pssm-ID: 234719  Cd Length: 205  Bit Score: 248.08  E-value: 2.92e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTtSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:PRK00300   15 GAGKSTLVKALLERDP-NLQLSVSATTRAPRPGEVDGVDYFFVSKEEFEEMIENGEFLEWAEVFGNYYGTPRSPVEEALA 93
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKEVEMMN 147
Cdd:PRK00300   94 AGKDVLLEIDWQGARQVKKKMPDAVSIFILPPSLEELERRLRGRGTDSEEVIARRLAKAREEIAHAS 160
 
Name Accession Description Interval E-value
gmk PRK00300
guanylate kinase; Provisional
1-147 2.92e-85

guanylate kinase; Provisional


Pssm-ID: 234719  Cd Length: 205  Bit Score: 248.08  E-value: 2.92e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTtSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:PRK00300   15 GAGKSTLVKALLERDP-NLQLSVSATTRAPRPGEVDGVDYFFVSKEEFEEMIENGEFLEWAEVFGNYYGTPRSPVEEALA 93
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKEVEMMN 147
Cdd:PRK00300   94 AGKDVLLEIDWQGARQVKKKMPDAVSIFILPPSLEELERRLRGRGTDSEEVIARRLAKAREEIAHAS 160
guanyl_kin TIGR03263
guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP ...
1-147 8.82e-80

guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP kinase. This enzyme transfers a phosphate from ATP to GMP, yielding ADP and GDP. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 213788  Cd Length: 179  Bit Score: 233.15  E-value: 8.82e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTtSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:TIGR03263  10 GAGKSTLVKALLEEDP-NLKFSISATTRKPRPGEVDGVDYFFVSKEEFEEMIKAGEFLEWAEVHGNYYGTPKSPVEEALA 88
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKEVEMMN 147
Cdd:TIGR03263  89 AGKDVLLEIDVQGARQVKKKFPDAVSIFILPPSLEELERRLRKRGTDSEEVIERRLAKAKKEIAHAD 155
Gmk COG0194
Guanylate kinase [Nucleotide transport and metabolism];
1-147 1.13e-79

Guanylate kinase [Nucleotide transport and metabolism];


Pssm-ID: 439964  Cd Length: 190  Bit Score: 233.42  E-value: 1.13e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDpTTSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:COG0194    12 GAGKTTLVKALLER-DPDLRFSVSATTRPPRPGEVDGVDYHFVSREEFERMIENGEFLEWAEVHGNYYGTPKAEVEEALA 90
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKEVEMMN 147
Cdd:COG0194    91 AGKDVLLEIDVQGARQVKKKFPDAVSIFILPPSLEELERRLRGRGTDSEEVIERRLAKAREELAHAD 157
GMPK cd00071
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), ...
1-112 5.70e-57

Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and guanosine diphosphate (GDP). It plays an essential role in the biosynthesis of guanosine triphosphate (GTP). This enzyme is also important for the activation of some antiviral and anticancer agents, such as acyclovir, ganciclovir, carbovir, and thiopurines.


Pssm-ID: 238026  Cd Length: 137  Bit Score: 173.87  E-value: 5.70e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTTSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:cd00071     9 GVGKSTLLKRLLEEFDPNFGFSVSHTTRKPRPGEVDGVDYHFVSKEEFERLIENGEFLEWAEFHGNYYGTSKAAVEEALA 88
                          90       100       110
                  ....*....|....*....|....*....|..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPP 112
Cdd:cd00071    89 EGKIVILEIDVQGARQVKKSYPDAVSIFILPP 120
GuKc smart00072
Guanylate kinase homologues; Active enzymes catalyze ATP-dependent phosphorylation of GMP to ...
1-142 7.90e-54

Guanylate kinase homologues; Active enzymes catalyze ATP-dependent phosphorylation of GMP to GDP. Structure resembles that of adenylate kinase. So-called membrane-associated guanylate kinase homologues (MAGUKs) do not possess guanylate kinase activities; instead at least some possess protein-binding functions.


Pssm-ID: 214504 [Multi-domain]  Cd Length: 174  Bit Score: 167.47  E-value: 7.90e-54
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045    1 GVGKGTVRKQIFDDPTTSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:smart00072   2 GVGKGTLLAELIQEIPDAFERVVSHTTRPPRPGEVNGVDYHFVSKEEFEDDIKSGLFLEWGEYEGNYYGTSKETIRQVAE 81
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2264345045   81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKE 142
Cdd:smart00072  82 KGKHCLLDIDPQGVKQLRKAQLYPIVIFIAPPSSEELERRLRQRGTETSERIQKRLAAAQKE 143
Guanylate_kin pfam00625
Guanylate kinase;
1-142 5.44e-46

Guanylate kinase;


Pssm-ID: 395500  Cd Length: 182  Bit Score: 147.91  E-value: 5.44e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTTSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:pfam00625  12 GVGKSHIKKALLSEYPDKFGYSVPHTTRPPRKGEVDGKDYYFVSKEEMERDISANEFLEYAQFSGNMYGTSVETIEQIHE 91
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKE 142
Cdd:pfam00625  92 QGKIVILDVDPQGVKQLRKAELSPISVFIKPPSLKVLQRRLKGRGKEQEEKINKRMAAAEQE 153
 
Name Accession Description Interval E-value
gmk PRK00300
guanylate kinase; Provisional
1-147 2.92e-85

guanylate kinase; Provisional


Pssm-ID: 234719  Cd Length: 205  Bit Score: 248.08  E-value: 2.92e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTtSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:PRK00300   15 GAGKSTLVKALLERDP-NLQLSVSATTRAPRPGEVDGVDYFFVSKEEFEEMIENGEFLEWAEVFGNYYGTPRSPVEEALA 93
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKEVEMMN 147
Cdd:PRK00300   94 AGKDVLLEIDWQGARQVKKKMPDAVSIFILPPSLEELERRLRGRGTDSEEVIARRLAKAREEIAHAS 160
guanyl_kin TIGR03263
guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP ...
1-147 8.82e-80

guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP kinase. This enzyme transfers a phosphate from ATP to GMP, yielding ADP and GDP. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 213788  Cd Length: 179  Bit Score: 233.15  E-value: 8.82e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTtSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:TIGR03263  10 GAGKSTLVKALLEEDP-NLKFSISATTRKPRPGEVDGVDYFFVSKEEFEEMIKAGEFLEWAEVHGNYYGTPKSPVEEALA 88
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKEVEMMN 147
Cdd:TIGR03263  89 AGKDVLLEIDVQGARQVKKKFPDAVSIFILPPSLEELERRLRKRGTDSEEVIERRLAKAKKEIAHAD 155
Gmk COG0194
Guanylate kinase [Nucleotide transport and metabolism];
1-147 1.13e-79

Guanylate kinase [Nucleotide transport and metabolism];


Pssm-ID: 439964  Cd Length: 190  Bit Score: 233.42  E-value: 1.13e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDpTTSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:COG0194    12 GAGKTTLVKALLER-DPDLRFSVSATTRPPRPGEVDGVDYHFVSREEFERMIENGEFLEWAEVHGNYYGTPKAEVEEALA 90
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKEVEMMN 147
Cdd:COG0194    91 AGKDVLLEIDVQGARQVKKKFPDAVSIFILPPSLEELERRLRGRGTDSEEVIERRLAKAREELAHAD 157
GMPK cd00071
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), ...
1-112 5.70e-57

Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and guanosine diphosphate (GDP). It plays an essential role in the biosynthesis of guanosine triphosphate (GTP). This enzyme is also important for the activation of some antiviral and anticancer agents, such as acyclovir, ganciclovir, carbovir, and thiopurines.


Pssm-ID: 238026  Cd Length: 137  Bit Score: 173.87  E-value: 5.70e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTTSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:cd00071     9 GVGKSTLLKRLLEEFDPNFGFSVSHTTRKPRPGEVDGVDYHFVSKEEFERLIENGEFLEWAEFHGNYYGTSKAAVEEALA 88
                          90       100       110
                  ....*....|....*....|....*....|..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPP 112
Cdd:cd00071    89 EGKIVILEIDVQGARQVKKSYPDAVSIFILPP 120
GuKc smart00072
Guanylate kinase homologues; Active enzymes catalyze ATP-dependent phosphorylation of GMP to ...
1-142 7.90e-54

Guanylate kinase homologues; Active enzymes catalyze ATP-dependent phosphorylation of GMP to GDP. Structure resembles that of adenylate kinase. So-called membrane-associated guanylate kinase homologues (MAGUKs) do not possess guanylate kinase activities; instead at least some possess protein-binding functions.


Pssm-ID: 214504 [Multi-domain]  Cd Length: 174  Bit Score: 167.47  E-value: 7.90e-54
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045    1 GVGKGTVRKQIFDDPTTSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:smart00072   2 GVGKGTLLAELIQEIPDAFERVVSHTTRPPRPGEVNGVDYHFVSKEEFEDDIKSGLFLEWGEYEGNYYGTSKETIRQVAE 81
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2264345045   81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKE 142
Cdd:smart00072  82 KGKHCLLDIDPQGVKQLRKAQLYPIVIFIAPPSSEELERRLRQRGTETSERIQKRLAAAQKE 143
gmk PRK14738
guanylate kinase; Provisional
1-144 2.27e-49

guanylate kinase; Provisional


Pssm-ID: 237809  Cd Length: 206  Bit Score: 157.20  E-value: 2.27e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTV--RKQIFDDPttsYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDT 78
Cdd:PRK14738   23 GVGKDAVlaRMRERKLP---FHFVVTATTRPKRPGEIDGVDYHFVTPEEFREMISQNELLEWAEVYGNYYGVPKAPVRQA 99
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2264345045  79 MEAGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKEVE 144
Cdd:PRK14738  100 LASGRDVIVKVDVQGAASIKRLVPEAVFIFLAPPSMDELTRRLELRRTESPEELERRLATAPLELE 165
Guanylate_kin pfam00625
Guanylate kinase;
1-142 5.44e-46

Guanylate kinase;


Pssm-ID: 395500  Cd Length: 182  Bit Score: 147.91  E-value: 5.44e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTTSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:pfam00625  12 GVGKSHIKKALLSEYPDKFGYSVPHTTRPPRKGEVDGKDYYFVSKEEMERDISANEFLEYAQFSGNMYGTSVETIEQIHE 91
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKE 142
Cdd:pfam00625  92 QGKIVILDVDPQGVKQLRKAELSPISVFIKPPSLKVLQRRLKGRGKEQEEKINKRMAAAEQE 153
PLN02772 PLN02772
guanylate kinase
1-144 8.87e-39

guanylate kinase


Pssm-ID: 215414 [Multi-domain]  Cd Length: 398  Bit Score: 134.97  E-value: 8.87e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTTSYKYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:PLN02772  145 GVGKGTLISMLMKEFPSMFGFSVSHTTRAPREMEKDGVHYHFTERSVMEKEIKDGKFLEFASVHGNLYGTSIEAVEVVTD 224
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKEVE 144
Cdd:PLN02772  225 SGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEELEKRLRARGTETEEQIQKRLRNAEAELE 288
gmk PRK14737
guanylate kinase; Provisional
1-147 4.43e-35

guanylate kinase; Provisional


Pssm-ID: 173199  Cd Length: 186  Bit Score: 120.10  E-value: 4.43e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045   1 GVGKGTVRKQIFDDPTTSYkYSISMTTRDKRDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQYVKDTME 80
Cdd:PRK14737   14 GGGKSTIIQALLEEHPDFL-FSISCTTRAPRPGDEEGKTYFFLTIEEFKKGIADGEFLEWAEVHDNYYGTPKAFIEDAFK 92
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2264345045  81 AGHDVFLEIEVEGAKQVRKKFPDALF-IFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKEVEMMN 147
Cdd:PRK14737   93 EGRSAIMDIDVQGAKIIKEKFPERIVtIFIEPPSEEEWEERLIHRGTDSEESIEKRIENGIIELDEAN 160
PRK10078 PRK10078
ribose 1,5-bisphosphokinase; Provisional
31-142 3.30e-04

ribose 1,5-bisphosphokinase; Provisional


Pssm-ID: 236648  Cd Length: 186  Bit Score: 38.96  E-value: 3.30e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2264345045  31 RDGEIDGVDYFFKTKEEFETLIQQDQFIEYAEYVGNYYGTPVQyVKDTMEAGHDVFleieVEGAK----QVRKKFPDALF 106
Cdd:PRK10078   39 RPASAGSENHIALSEQEFFTRAGQNLFALSWHANGLYYGVGIE-IDLWLHAGFDVL----VNGSRahlpQARARYQSALL 113
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2264345045 107 IFLAPPSLEHLRERLVGRGTESDEKIQKRVSEARKE 142
Cdd:PRK10078  114 PVCLQVSPEILRQRLENRGRENASEINARLARAARY 149
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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