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Conserved domains on  [gi|2267398211|gb|UTE81564|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Propithecus perrieri]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 538.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211   1 MFTLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALF 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  81 IALIMWTPLPLPQPLINMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 161 TLSTLITTQEYTWLMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398211 241 LFLGTLYNPYTPQAYSMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 538.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211   1 MFTLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALF 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  81 IALIMWTPLPLPQPLINMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 161 TLSTLITTQEYTWLMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398211 241 LFLGTLYNPYTPQAYSMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
16-305 4.91e-108

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 316.72  E-value: 4.91e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 I--NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 174 LMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYtPQ 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPF-PL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267398211 254 AYSMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-299 2.41e-95

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 285.10  E-value: 2.41e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:COG1005    25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 I--NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQE-YT 172
Cdd:COG1005   105 VlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 173 WLMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYTP 252
Cdd:COG1005   185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267398211 253 QAYSM-----MFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   265 LPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 538.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211   1 MFTLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALF 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  81 IALIMWTPLPLPQPLINMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 161 TLSTLITTQEYTWLMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398211 241 LFLGTLYNPYTPQAYSMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 16-318 2.94e-177

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 492.87  E-value: 2.94e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00111   21 AVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPL 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 INMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLM 175
Cdd:MTH00111  101 ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYTPQAY 255
Cdd:MTH00111  181 FSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPELF 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398211 256 SMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPPQM 318
Cdd:MTH00111  261 TINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-317 1.53e-170

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 476.03  E-value: 1.53e-170
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00071   21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 INMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLM 175
Cdd:MTH00071  101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYTPQAY 255
Cdd:MTH00071  181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELS 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2267398211 256 SMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPPQ 317
Cdd:MTH00071  261 TMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-318 1.32e-168

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 471.01  E-value: 1.32e-168
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00134   22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 INMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLM 175
Cdd:MTH00134  102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYTPQAY 255
Cdd:MTH00134  182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELT 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398211 256 SMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPPQM 318
Cdd:MTH00134  262 TINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 16-316 5.61e-138

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 392.74  E-value: 5.61e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00218   18 AVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSL 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 INMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLM 175
Cdd:MTH00218   98 INLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNpytpqAY 255
Cdd:MTH00218  178 IPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLT-----TI 252

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267398211 256 SMMFatKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPP 316
Cdd:MTH00218  253 NLML--KATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 16-316 4.95e-137

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 390.88  E-value: 4.95e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00040   20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 INMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLM 175
Cdd:MTH00040  100 LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLL 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFL--GTLYNPYTPQ 253
Cdd:MTH00040  180 FPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLggGSPFNEIFPI 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398211 254 AySMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPP 316
Cdd:MTH00040  260 N-IIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 16-313 2.71e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 327.47  E-value: 2.71e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00195   18 AVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGF 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 INMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLM 175
Cdd:MTH00195   98 SSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVI 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLflgtlynpYTPQAY 255
Cdd:MTH00195  178 LLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTIL--------FLGGGG 249

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398211 256 SMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSG 313
Cdd:MTH00195  250 TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 18-310 3.94e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 317.10  E-value: 3.94e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  18 AFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPLIN 97
Cdd:MTH00193   20 AFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLIS 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  98 MNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLMIP 177
Cdd:MTH00193  100 FNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFF 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 178 SWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYnpytpqaYSM 257
Cdd:MTH00193  180 SFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDL-------LSL 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2267398211 258 MFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPIL 310
Cdd:MTH00193  253 LFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
NADHdh pfam00146
NADH dehydrogenase;
16-305 4.91e-108

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 316.72  E-value: 4.91e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 I--NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 174 LMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYtPQ 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPF-PL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267398211 254 AYSMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 16-302 1.97e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 315.27  E-value: 1.97e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00143   17 AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSS 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 INMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLM 175
Cdd:MTH00143   97 SYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLG 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYTpqAY 255
Cdd:MTH00143  177 FLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVLFL--LG 254

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 2267398211 256 SMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
Cdd:MTH00143  255 GVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-316 4.00e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 302.42  E-value: 4.00e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQP- 94
Cdd:MTH00054   18 SIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYGEGv 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  95 -LINMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTW 173
Cdd:MTH00054   98 vLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIW 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 174 LMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYTPQ 253
Cdd:MTH00054  178 FIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPT 257

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398211 254 AY---SMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPP 316
Cdd:MTH00054  258 SYfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-307 7.65e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 301.18  E-value: 7.65e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211   1 MFTLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALF 80
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  81 IALIMWTPLPLPQPLINMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 161 TLSTLITTQEYTWLMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267398211 241 LFLGTLYNpytpqAYSMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00225  242 LFFGGFFV-----TIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 16-316 1.97e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 290.48  E-value: 1.97e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00216   22 AVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYERGV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 I--NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQ-EYT 172
Cdd:MTH00216  102 LisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQnNGI 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 173 WLMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYTP 252
Cdd:MTH00216  182 WFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSPIKY 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2267398211 253 -QAYSMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPP 316
Cdd:MTH00216  262 fKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-299 2.41e-95

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 285.10  E-value: 2.41e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:COG1005    25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 I--NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQE-YT 172
Cdd:COG1005   105 VlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 173 WLMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYTP 252
Cdd:COG1005   185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267398211 253 QAYSM-----MFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   265 LPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
18-303 1.23e-91

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 275.53  E-value: 1.23e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  18 AFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQ--PL 95
Cdd:PRK06076   28 AFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFGPelVI 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 INMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLM 175
Cdd:PRK06076  108 ADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNI 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPY---TP 252
Cdd:PRK06076  188 IPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFplgGG 267

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2267398211 253 QAYSMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:PRK06076  268 IPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 16-311 6.46e-86

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 260.48  E-value: 6.46e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00010   19 AMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPS 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 INMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQeYTWLM 175
Cdd:MTH00010   99 FFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ-YSWIL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLynPYTpQAY 255
Cdd:MTH00010  178 LMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFI--PSI-FIS 254

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398211 256 SMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILS 311
Cdd:MTH00010  255 DLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 16-316 1.37e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 255.71  E-value: 1.37e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQP- 94
Cdd:MTH00029   23 SVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGv 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  95 -LINMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTW 173
Cdd:MTH00029  103 fLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVW 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 174 LMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTT-------------- 239
Cdd:MTH00029  183 LIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTifflggwlspldgi 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267398211 240 --TLFLGTLYNPYTPQAYSMMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGIPP 316
Cdd:MTH00029  263 ptPPEAFSIFEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-307 4.59e-57

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 185.87  E-value: 4.59e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  16 AMAFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00090   12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  96 INMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLStlittQEYTWLM 175
Cdd:MTH00090   92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV-----SSFSLSL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 176 IPSWplaMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGtlynpytpqaY 255
Cdd:MTH00090  167 FVIY---LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK----------F 233

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267398211 256 SMMFatkALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00090  234 SFLM---LFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-298 7.34e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 157.01  E-value: 7.34e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  18 AFLILIERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPLIN 97
Cdd:MTH00058   19 AFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSY 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  98 MNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLMIP 177
Cdd:MTH00058   99 SSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLFP 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 178 swPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYtniIMMNVLTTTLFLGTlynpYTPQAYSM 257
Cdd:MTH00058  179 --LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEY---LIIFIFSWLGSVLF----FGGGFVSI 249

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2267398211 258 MFatkaLLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058  250 ML----LFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 23-298 3.74e-39

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 141.24  E-value: 3.74e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  23 IERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPLI--NMNM 100
Cdd:CHL00032   50 LEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVlaDLSI 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 101 GILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQ-EYTWLMIPSW 179
Cdd:CHL00032  130 GVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQsKYGFWGWNLW 209

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 180 --PLA-MMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLT---------TTLFLGTLY 247
Cdd:CHL00032  210 rqPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVtvlylggwnLSIPYIFIP 289

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 248 NPYTPQAYSMMFATKALLLITL-----FLWV----RASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:CHL00032  290 ELFEINKTGGVFGTTIGIFITLaktylFLFIsittRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-305 1.32e-23

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 98.33  E-value: 1.32e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  19 FLILIERKILGYMQLRKGPnivgpyGLLQPFADAMKLFIKEPLRPLTSSTLLYItAPTLAL--FIALIMWTPLPLPQPLI 96
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFRA-APYVALaaMLLAALLVPVLTTGPPL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211  97 NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYT--WL 174
Cdd:COG0650    93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAHgpLL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398211 175 MIPSWPLAM-MWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYtnIIMMNVLTTTLFLGTLYNPYTPQ 253
Cdd:COG0650   173 LSPSLLLAAiAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAA--LKLFVLLSLFVNLFLPWGIALTL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2267398211 254 AYSM-MFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:COG0650   251 LLALlLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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