|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 784.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 1 MLKIIVPTIMLFPVTWYSNNSKIWINATSYSLMISFVGLSFLNQSNNNSNNFSMNFFSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 81 QYHLKKEPWLRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 161 LVALIHLQNSMGSLNLLTMNLWLKELPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 241 YGMMRITIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 321 LTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2267399746 401 LITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILGPTL 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 627.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 1 MLKIIVPTIMLFPVTWYSNNSKIWINATSYSLMISFVGLSFLNQSNNNSNNFSMNFFSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 81 QYHLKKEPWLRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 161 LVALIHLQNSMGSLNLLTMNLWLKELPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 241 YGMMRITIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 321 LTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2267399746 401 LITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILGP 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 586.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 1 MLKIIVPTIMLFPVTWYSNNSKIWINATSYSLMISFVGLSFLNQSNNNSNNFSMNFFSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 81 QYHLKKEPWLRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 161 LVALIHLQNSMGSLNLLTMNLWLKELPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 241 YGMMRITIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 321 LTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2267399746 401 LITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
4.90e-180 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 511.42 E-value: 4.90e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 1 MLKIIVPTIMLFPVTWYSNNSKIWINATSYSLMISFVGLSFLNQSNNN-SNNFSMNFFSDPLSSPLLMLTMWLLPLMIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETgWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 80 SQYHLKKEPWLRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 160 LLVALIHLQNSMGSLNLLTMNLWLKELPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 240 GYGMMRITIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 320 GLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2267399746 400 MLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILGPT 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
1.02e-166 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 477.12 E-value: 1.02e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 3 KIIVPTIMLFPVTWYSNNSKIWINATSYSLMI-SFVGLSFLNQSNNNSNNFSMNFFSDPLSSPLLMLTMWLLPLMIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIaLLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 82 YHLKKEPWLRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 162 VALIHLQNSMGSLNLLTMnlwLKELPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYIL---YFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 242 GMMRITIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 322 TSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2267399746 402 ITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
4.13e-151 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 437.48 E-value: 4.13e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 1 MLKIIVPTIMLFPVTWYSNNSKIWINATSYSLMISFVGLSFLNQSNNNS-NNFSMNFFSDPLSSPLLMLTMWLLPLMIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSwHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 80 SQYHLKKEPWLRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 160 LLVALIHLQNSMGSLNLLTMNLWLKELPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 240 GYGMMR-ITIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
Cdd:MTH00044 241 GYGLIRlINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 319 HGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2267399746 399 NMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTIL 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-451 |
4.06e-119 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 355.62 E-value: 4.06e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 1 MLKIIVPTIMLFPVTWYSNNskiWINATSYSLMISFVgLSFLNQSNNNSNNFSMNFFSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFL-FMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 81 QYHLKKEPWlrKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00163 77 ESVYKKNNY--SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 161 LVALIHLQNSMGSLNLLTMNLwlkelpNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 241 YGMMRITIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 321 LTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2267399746 401 LITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNP 451
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKS 439
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
59-451 |
3.68e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 349.52 E-value: 3.68e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKEPWlrKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGN 138
Cdd:MTH00150 23 DSMSSLLISLSLWISGLMMLASQKSVKLRNK--SSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWGY 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSWssnLLWMACIMAFMVKMPLYGFHLWLPK 218
Cdd:MTH00150 101 QPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKLPMYPFHLWLPK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVI 298
Cdd:MTH00150 178 AHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 299 VAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGE 378
Cdd:MTH00150 258 AGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSE 337
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267399746 379 LFVMMASFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNP 451
Cdd:MTH00150 338 IMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKS 410
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
6.74e-107 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 324.39 E-value: 6.74e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 1 MLKIIVPTIMLFPVTWYSNNSkIWINATSYSLMISFVGLSFLNQSNNNSNNFSMNFFSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPW-SWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 81 Q--YHLKKEPwlrkKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSL 158
Cdd:MTH00014 80 FkiFQNNKAP----KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 159 PLLVALIHLQNSMGSLNLLTMNLWLkelPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKL 238
Cdd:MTH00014 156 PLLMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 239 GGYGMMRITIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
Cdd:MTH00014 233 GGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 319 HGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGL 398
Cdd:MTH00014 313 HGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAI 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2267399746 399 NMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTI 454
Cdd:MTH00014 393 TSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
32-454 |
9.31e-106 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 321.54 E-value: 9.31e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 32 LMISFVGLSFLNQSNNNSNNFSMNFFSDPLSSPLLMLTMWLLPLMIMASQYHLKKEpwLRKKSYLSMLISLQVFLVMTFT 111
Cdd:MTH00205 29 LIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLLLILILSFS 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 112 ANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLnllTMNLWLKELPNSWS 191
Cdd:MTH00205 107 VDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSL---SMFFNFPLNFSDFY 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 192 SNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFLMLCLWGMIM 271
Cdd:MTH00205 184 LFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVM 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTL 351
Cdd:MTH00205 264 TGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNT 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 352 LPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFT 431
Cdd:MTH00205 344 FPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISE 423
|
410 420
....*....|....*....|...
gi 2267399746 432 RENTLMSMHMLPLLFLTLNPKTI 454
Cdd:MTH00205 424 REYYILILHWFPLNILILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-458 |
4.28e-81 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 258.86 E-value: 4.28e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKepwlRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QtERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSWSSnLLWMACIMAFMVKMPLYGFHLWLPK 218
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQL-LLFLAFFIAFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDP-TTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIG 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 378 ELFVMMASFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILGP 457
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDL 474
|
.
gi 2267399746 458 T 458
Cdd:COG1008 475 I 475
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-458 |
2.00e-74 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 241.38 E-value: 2.00e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKepwlRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QTeRLNAGLYFLFYTLIGSLPLLVALIHLQ-NSMGSLNLLTMNLwlKELPNSWSSnLLWMACIMAFMVKMPLYGFHLWLP 217
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELLN--LPLPFGVQT-WLFLAFFIAFAVKVPLFPLHTWLP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDP-TTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:TIGR01972 228 DAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGF 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 297 VIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLI 376
Cdd:TIGR01972 308 VLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFV 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 377 GELFVMMASFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTF-HTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTIL 455
Cdd:TIGR01972 388 GEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNpEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLL 467
|
...
gi 2267399746 456 GPT 458
Cdd:TIGR01972 468 DLT 470
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-458 |
4.82e-74 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 240.87 E-value: 4.82e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKepwlRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QTERLNAGLYFLFYTLIGSLPLLVALIHL----QNSMGSLNLLTmnlWLKELPNSWSSNLLWMACIMAFMVKMPLYGFHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIAD---LLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 294 MALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 374 NLIGELFVMMASFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKT 453
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472
|
....*
gi 2267399746 454 ILGPT 458
Cdd:PRK05846 473 LLDVI 477
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
59-410 |
2.31e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 230.71 E-value: 2.31e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKkepwLRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGN 138
Cdd:MTH00217 79 DGISIFFLILTALLTPICILISWNSIK----FLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTmnLWLKELPNSWSsNLLWMACIMAFMVKMPLYGFHLWLPK 218
Cdd:MTH00217 155 REEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQA--LCCLKIEKELQ-YFIFLGFFLSLAIKIPKIPFHIWLPQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:MTH00217 232 AHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLV 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIG 377
Cdd:MTH00217 312 TLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVG 391
|
330 340 350
....*....|....*....|....*....|...
gi 2267399746 378 ELFVMMASFSWSNISIILMGLNMLITALYSLYM 410
Cdd:MTH00217 392 EFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
6.87e-68 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 218.34 E-value: 6.87e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 112 ANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 192 SNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFLMLCLWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANS-NYERIHSRTMLLARGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2267399746 351 LLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
59-410 |
1.58e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 223.40 E-value: 1.58e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKkepwLRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGN 138
Cdd:MTH00204 82 DGVSLFFILLTTLLIPICILISWKSIK----FLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLtmNLWLKELPNSwSSNLLWMACIMAFMVKMPLYGFHLWLPK 218
Cdd:MTH00204 158 REEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQ--ILLNIKLPLS-IQKWLLVGFFLSLAVKIPQIPFHIWLPQ 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPF-LMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:MTH00204 235 AHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIG 377
Cdd:MTH00204 315 PLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVG 394
|
330 340 350
....*....|....*....|....*....|...
gi 2267399746 378 ELFVMMASFSWSNISIILMGLNMLITALYSLYM 410
Cdd:MTH00204 395 EFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
59-419 |
2.41e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 213.24 E-value: 2.41e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKkepwLRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGN 138
Cdd:MTH00226 101 DGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMnLWLKELPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPK 218
Cdd:MTH00226 177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL-ASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPK 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITI-ILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:MTH00226 256 AHVEAPVAGSVLLAGILLKLGGYGLVRLSWpILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIG 377
Cdd:MTH00226 336 SITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIG 415
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2267399746 378 ELFVMMASFSWSNISIILMGLNMLITALYSLYMLITTQRGKP 419
Cdd:MTH00226 416 EYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAP 457
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
102-442 |
6.96e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 163.92 E-value: 6.96e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 102 LQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHlqnsmgslNLLTMNL 181
Cdd:MTH00094 71 LILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 182 WLKELPNSWSSNLLwmaCIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTtksMAYPF 261
Cdd:MTH00094 143 CYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFW 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 262 LMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:MTH00094 217 IIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 342 MLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTF 421
Cdd:MTH00094 297 IYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFS 376
|
330 340
....*....|....*....|.
gi 2267399746 422 HTHNLNPSFTRENTLMSMHML 442
Cdd:MTH00094 377 NFNNFNVGLSLPLVFMMFNMF 397
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
5.36e-44 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 161.35 E-value: 5.36e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASqYHLKKEPWLrkksYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFAS-WKVTRKPRL----FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QtERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSWSSnLLWMACIMAFMVKMPLYGFHLWLPK 218
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALEL-LLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAiLGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIG 377
Cdd:PRK12561 291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2267399746 378 ELFVMMA-------SFSWSNISIILMGLNMLITALYSLYML 411
Cdd:PRK12561 371 ELTVFLGitssdvySSTFRTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
59-415 |
9.12e-43 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 156.08 E-value: 9.12e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLlplMIMASQYHLKKEPWLRKKSYLSMLISLQVF-LVMTFTANELILFYILFEATLIPTLIIITRWG 137
Cdd:COG0651 75 DRLSALFLLLTALV---ALAVLLYSIGYMRHERRGRRFYPLFLLLLAgMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 138 NQtERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSWSSnLLWMACIMAFMVKMPLYGFHLWLP 217
Cdd:COG0651 152 TK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFLMLCLWG--MIMTSSICLRQTDLKSLIAYSSVSHMA 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLGTLLLVLGLltMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 296 LVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINL 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2267399746 376 IGELFVMMASFSWSN-ISIILMGLNMLITALYSLYMLITTQ 415
Cdd:COG0651 390 VSKWLLLQAALEAGAwLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-411 |
6.82e-42 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 155.24 E-value: 6.82e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKkepwlRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QtERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSwSSNLLWMACIMAFMVKMPLYGFHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFL-MLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGL---QTLLPLMATWWLLASLTNLALPPSIN 374
Cdd:PRK06473 311 LLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVG 390
|
330 340 350
....*....|....*....|....*....|....*..
gi 2267399746 375 LIGELFVMMASFSWSNISIILMGLNMLITALYSLYML 411
Cdd:PRK06473 391 FIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
2.62e-36 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 140.23 E-value: 2.62e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASqyhlkkepW---LRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITR 135
Cdd:PRK02546 86 DGLSMPLILLTGFITTLAVLAA--------WpvtFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAI 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 136 WGNQtERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSWSsNLLWMACIMAFMVKMPLYGFHLW 215
Cdd:PRK02546 158 WGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAYGVKLPIVPLHTW 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 216 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFL-MLCLWGMIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK02546 236 LPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSSISHM 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 295 ALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSIN 374
Cdd:PRK02546 316 GFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSG 395
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2267399746 375 LIGEL--FVMMA-----SFSWSNISIILMGLNMLITALYSLYML 411
Cdd:PRK02546 396 FVAELmvFVGFAtsdayTLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-411 |
4.79e-36 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 138.92 E-value: 4.79e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 110 FTANELILFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIhlqnSMGSLNLLTMNLWLKELPN- 188
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVL----GMGLYGSNEPTLNFETLANq 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 189 SWSSNL---LWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFLMLC 265
Cdd:CHL00011 204 SYPVALeilFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIV 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 266 -LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhsRTMLL 344
Cdd:CHL00011 284 gAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYL 361
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2267399746 345 AR--GLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMA-------SFSWSNISIILMGLNMLITALYSLYML 411
Cdd:CHL00011 362 DEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGiitsqkyLLMPKILITFVMAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-451 |
3.51e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 134.07 E-value: 3.51e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKkepwlRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QtERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSwSSNLLWMACIMAFMVKMPLYGFHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPflMLCLWGMIMT---SSICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 296 LVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTL---LPLMATWWLLASLTNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267399746 373 INLIGELFVMMASFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNP 451
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKIPALILTALILFLGVQP 467
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-406 |
4.37e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 101.49 E-value: 4.37e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 108 MTFTANeLILFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNlltMNLWLKELP 187
Cdd:PRK08375 122 ALLTAD-LFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLN---MADLAGALA 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 188 NSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITI----ILDPTTKSMAYPFLM 263
Cdd:PRK08375 197 ENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 264 LCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTML 343
Cdd:PRK08375 277 LALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLS 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2267399746 344 LARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFS-WSNISIILMGLNMLITALY 406
Cdd:PRK08375 357 ELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-408 |
2.57e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 99.66 E-value: 2.57e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKEPWLrkKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGP--EWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 139 QTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLN-----LLTMNLWLKELPNS-----WSSNLLWMACIMAFMVKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNmadlsAKIRGLSFPLTGGLagnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 209 LYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-------TIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 282 LKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2267399746 362 ASLTNLALPPSINLIGELFVMMASFSwsnISIILMGLNMLITALYSL 408
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLE---SGFYLPALVLLIASAISL 442
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
213-413 |
8.12e-20 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 91.92 E-value: 8.12e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 213 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFLMLC--LWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfgLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 291 VSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALP 370
Cdd:PRK06458 314 IEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMP 393
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2267399746 371 PSINLIGELFVMMASFSWSNISIILMGLNMLITALYSLYMLIT 413
Cdd:PRK06458 394 PFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVA 436
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
89-395 |
5.65e-19 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 88.83 E-value: 5.65e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 89 WLRKKSYLSMLISLqVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQ 168
Cdd:MTH00062 68 LLSGVSRFFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 169 NSMGSLNLLtmnlwlkeLPNSWSSNLLWMACIMAFM--VKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI 246
Cdd:MTH00062 147 LVNGSFNFS--------DWGSDDSVSLIVYYVLSFMfiTKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 247 T-IILDPTTKSMAYPFLMLCLWGMIMTSSIClrqtDLKSLIAYSSVSHMaLVIVAILIQTPWSFMGATALM-IAHGLTSS 324
Cdd:MTH00062 219 CgFIFSGSFLGYLFLCCLFSVFFLITACSEL----DGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAG 293
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267399746 325 MLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIIL 395
Cdd:MTH00062 294 LVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
4.88e-18 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 79.49 E-value: 4.88e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 1 MLKIIVPTIMLFPVTWYSNNSKIWINATSYSLMISFVGLSFLNQSNNNSNNFS-MNFFSDPLSSPLLMLTMWLLPLMIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLsYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2267399746 80 SQYHLKKEPWLRKKSYLSMLISLQVFLVMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-405 |
3.94e-16 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 81.12 E-value: 3.94e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 94 SYLSMLISLQVFLVMtftANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGS 173
Cdd:PRK12647 99 SYILLFMASMLGLVL---SDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGT 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 174 LN---LLTMNLWLKElpNSWSSNLLWMACIMAFmVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRitii 249
Cdd:PRK12647 176 YSlseLLASGDVIRE--HPLYLAILLLVLGGAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR---- 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 250 LDPTTKSMAYPFLMLCLWG---MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSML 326
Cdd:PRK12647 248 LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGAL 327
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267399746 327 FCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNMLITAL 405
Cdd:PRK12647 328 FMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNAL 406
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
94-424 |
5.55e-15 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 77.11 E-value: 5.55e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 94 SYLSMLISLQVFLVMtftANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGS 173
Cdd:COG1009 115 AYLLLFMAAMLGLVL---SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 174 LNLLTMNLWLkelPNSWSSNLLWMACIMAF---MVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITII 249
Cdd:COG1009 192 LNFSELLAAA---PTILSSPLLTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 250 LDPTtkSMAYPFLMLC-LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFC 328
Cdd:COG1009 268 FALS--PVWLTVVAIIgAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFL 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 329 LANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNML---ITAL 405
Cdd:COG1009 343 GAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAF 422
|
330
....*....|....*....
gi 2267399746 406 YSLYMLITTQRGKPTFHTH 424
Cdd:COG1009 423 YSFRLFFLVFFGKPRPKTP 441
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
102-408 |
7.52e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 76.33 E-value: 7.52e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 102 LQVFLVMTFTANELILFYILFE-ATLIPTLIIITRwgNQTERLNAGLYFLFYTLIGSLPLLVALIHL------QNSMGSL 174
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFIASTAMIFAFIGLIFLfsltrqALGTGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 175 NLLTMNLWLKELPNSWSSnLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTT 254
Cdd:PRK08676 189 NWTELAAHASLLSPSVLG-ASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSG 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 255 KSMAYPFLMLCLwGMIMTSSIC---LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLAN 331
Cdd:PRK08676 268 AAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAG 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267399746 332 SNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSnISIILMGLNMLITALYSL 408
Cdd:PRK08676 347 ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGIS-VWLVLAVLLLLLLAASSF 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
90-327 |
2.18e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 75.42 E-value: 2.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 90 LRKKSYLSMLISLQVFLVM-TFTANELILFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFyTLIGSLPLLVALIHLQ 168
Cdd:PRK08668 94 TKNDAYFNMFALMSLAGVLgVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIY 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 169 NSMGSLNLLTMnlwLKELPNSWSSNLLWMAC--IMAFMV-KMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR 245
Cdd:PRK08668 172 AKTGTFDFADI---SQGLINDTSTGFALIVFlfLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLL 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 246 ITIILdPTTK------------SMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGAT 313
Cdd:PRK08668 249 VLYVL-PGTKlfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGL 327
|
250
....*....|....
gi 2267399746 314 ALMIAHGLTSSMLF 327
Cdd:PRK08668 328 FHVFNHALFKGLFF 341
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
91-386 |
8.04e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 73.61 E-value: 8.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 91 RKKSYLSMLISLQVF-LVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQN 169
Cdd:PRK08667 108 ERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFI 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 170 SMGSLNLLTMNLWLKELPnswssnLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRitII 249
Cdd:PRK08667 188 QTGSFELSPLGASAGILS------LVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 250 LDPTTKSMAYPFLMLCLwGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALM---------- 316
Cdd:PRK08667 260 MDVLSPELWWGVLILLA-GSIsalLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfh 338
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267399746 317 -IAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASF 386
Cdd:PRK08667 339 sLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-384 |
4.09e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 71.15 E-value: 4.09e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 108 MTFTANELILFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELP 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 188 nSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTtKSMAYPFLMLCLW 267
Cdd:PRK12665 205 -SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPG-GGLDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 268 GMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARG 347
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
250 260 270
....*....|....*....|....*....|....*...
gi 2267399746 348 LQTLLPLMATWWLLASLtNLA-LPPSINLIGELFVMMA 384
Cdd:PRK12665 363 LAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEA 399
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
112-371 |
2.55e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 69.30 E-value: 2.55e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 112 ANELILFYILFEATLIPTLIIITRWGNQTErlNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNL---LTMNLWLKelpN 188
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLsgiLHSDVWAE---K 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 189 SWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTtksMAYPFLmLCLWG 268
Cdd:PRK12650 204 PGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDV---AVWNWL-LIIVG 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 269 M---IMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLA 345
Cdd:PRK12650 280 MitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRL 359
|
250 260
....*....|....*....|....*.
gi 2267399746 346 RGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK12650 360 GSLWRRMPFTFVSVTIAALSMAAVPP 385
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-397 |
2.66e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 68.61 E-value: 2.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKEPWLRK--KSYLSMLISLQVFLVMTFTaNELILFYILFEATLIPTLIIITRw 136
Cdd:PRK12662 75 DILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKipSFYSAFLLCLGGLLGILVS-NDVFNIYVFLEISSISSYVLVAM- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 137 GNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSWSSNLLWMACIMAFMVKMPLYGFHLWL 216
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 217 PKAHVEAPIAGSMVLAAVLLKLGGYGMMRITII-----LDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK12662 233 IQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 292 SHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK12662 313 SHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
330 340
....*....|....*....|....*....
gi 2267399746 372 SINLIGELFVM---MASFSWSNISIILMG 397
Cdd:PRK12662 393 TSGFVAKWYILdafIKSNAWIGLVVLLVG 421
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
111-450 |
1.71e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 66.32 E-value: 1.71e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 111 TANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLN---LLTMNLWLKELP 187
Cdd:PRK12646 128 LSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNiteILGQADHIKNHG 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 188 nsWSSNLLWMACIMAFmVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITIILDpTTKSMAYPFLMLCL 266
Cdd:PRK12646 208 --LFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 267 WGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI-----LIQTPWSFMGATALMIA---------HGLTSSMLFCLANS 332
Cdd:PRK12646 283 ITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLfaalfhlmnHAIFKCALFMGVGI 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 333 NYERIHSRTMLLARGLQTLLPLMATWWLLASLTnLALPPSIN--LIGELFV--MMASFSWSNISIILMGLNMLI------ 402
Cdd:PRK12646 363 IDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMFLdaLTQTGQLSQFSLISMIIIVFIgviasi 441
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2267399746 403 -TALYSLYMLITTQRGKptFHTHNLNPSFTRENTLMS------MHMLPLLFLTLN 450
Cdd:PRK12646 442 fTFTYALYMVKEVFWGK--YDSKVFTKKNIHEPWLFSlpslilMVLVPVIFFVPN 494
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
106-402 |
6.18e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 64.52 E-value: 6.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 106 LVMTFTANELILFYILFEA-TLIPTLIIITrwgNQTERLN--AGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMnlw 182
Cdd:PRK06521 126 MVLVLLADDAFSFLVAWETmSLSSWFLVIA---NHREAEIrrAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM--- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 183 LKELPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITI-ILDPTTKSMAYPF 261
Cdd:PRK06521 200 RAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 262 LMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVA-----ILIQTPWSFMGATALMIA------HGLTSSMLFCLA 330
Cdd:PRK06521 280 LALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlglamVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGA 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2267399746 331 NSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSniSIILMGLNMLI 402
Cdd:PRK06521 360 GAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSP--GLPQWGLKLAV 429
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
115-401 |
6.67e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 64.22 E-value: 6.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 115 LILFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNlwlkELPNSWSSnL 194
Cdd:PRK06525 135 LLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALS----GLHGSLKY-L 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 195 LWMACIMAFMVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITIILDPTTKSMAYPFLMLCLWGMIMTS 273
Cdd:PRK06525 209 VFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGF 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 274 SICLRQTDLKSLIAYSSVSHMALVIVAILIQ---TPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQT 350
Cdd:PRK06525 288 LMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLK 367
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2267399746 351 LLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNML 401
Cdd:PRK06525 368 KLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
119-398 |
9.88e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 63.63 E-value: 9.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 119 YILFEATLIpTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELpNSWSSNLLWMA 198
Cdd:PRK08377 134 FVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTI-DPTVAQVGLAL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 199 CIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTT--KSMAYPFLMLCLWGMIMTSSIC 276
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 277 LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMA 356
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2267399746 357 TWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGL 398
Cdd:PRK08377 372 LALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVL 413
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-339 |
3.99e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 61.51 E-value: 3.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 91 RKKSYLSM-LISLQVFLVMTFTANELILFYILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQN 169
Cdd:PRK07234 91 AKTRFFYAqLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 170 SMGSLNLltmnlwlKELPNSWSSNLLWMAciMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITII 249
Cdd:PRK07234 170 ANGTFAF-------SGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 250 LDPTTKSMAYPFLMLCLWGmimtSSICLRQTDLKSLIAYSSVSHMALVIVAILIqtpwsfmgATALMIAHGLTSSMLFCL 329
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250
....*....|
gi 2267399746 330 ANSNYERIHS 339
Cdd:PRK07234 309 AGALPSRNFT 318
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-411 |
5.23e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 61.37 E-value: 5.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 95 YLSMLISLQVFLVMTftaNELILFYILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPL-LVALIHLQNSMGS 173
Cdd:PRK06589 121 FFNLTILIGVLIALS---SDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGN 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 174 LNLLTMNLWlkelpnSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITII---L 250
Cdd:PRK06589 197 LDFVSGGLF------SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 251 DPTTK--SMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFC 328
Cdd:PRK06589 271 SYLQRifAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFY 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 329 LANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNI--SIILMGLNMLITALY 406
Cdd:PRK06589 351 SMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPwlSIIVMLVVIASSILS 430
|
....*
gi 2267399746 407 SLYML 411
Cdd:PRK06589 431 ALYLL 435
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-449 |
1.60e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 59.96 E-value: 1.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 110 FTANELILFYILFEATLIPTLIIITRWGNQTErLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNS 189
Cdd:PRK07691 125 FLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAG 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 190 WSS--NLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-TIILDPTTKSMAYPFLMLCL 266
Cdd:PRK07691 204 QTGliTVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILAL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 267 WGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLAR 346
Cdd:PRK07691 284 LTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMG 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 347 GLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSN-ISIILMGLNMLITaLYS-LYMLITTQRGKPTFHTH 424
Cdd:PRK07691 364 GLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFyVSGIIVLLSSLLV-LYSvIKIFLKGFWGEPKGYDL 442
|
330 340
....*....|....*....|....*
gi 2267399746 425 NLNPSFTRentlMSMHMLPLLFLTL 449
Cdd:PRK07691 443 NNKVPVKK----LLLPAVVLVAITI 463
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
119-411 |
3.51e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 58.81 E-value: 3.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 119 YILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSWSSNLLWMA 198
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 199 CIMAFMVKMPLYGFHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFL--MLCLwGMIMTSSIC 276
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI-TMVIGALGA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 277 LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMA 356
Cdd:PRK12663 291 LAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFG 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2267399746 357 TWWLLASLTNLALPPSINLIGELFVMMASFswSNISIILMGLnMLITALYSLYML 411
Cdd:PRK12663 371 ALFLILIFAIGGLPPFSGFWGKVLLVQGAL--DNGAYILLAL-MLITSLITMYSL 422
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
80-408 |
3.93e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 58.83 E-value: 3.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 80 SQYHLKKEPwlRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00208 127 SHYYMSNDP--NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIG 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 160 LLVALihlqnsmgSLNLLTMNLW-LKEL-----PNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAhVEAPIAGS----- 228
Cdd:MTH00208 205 IILFL--------SLSLINFNSWnLNEIlslnnSNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhs 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 229 --MVLAAVLLklggygMMRITIILDPTTKsmaypFLMLCLW----GMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAIL 302
Cdd:MTH00208 276 stMVVAGVFL------LIRTSPLISNSPW-----FLSLCLIlgslTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIG 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 303 IQTPWsfmgaTAL--MIAHGLTSSMLFCLANSnyeRIHS-------RTMllaRGLQTLLPLMATWWLLASLTNLALP--- 370
Cdd:MTH00208 345 LNQPN-----LALfhICTHAFFKAMLFLCSGS---IIHSlnneqdlRKM---GGLSFLLPVTSSCIILGSLALMGTPfla 413
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2267399746 371 --PSINLIGELFVmmASFSwSNISIILMGLNMLITALYSL 408
Cdd:MTH00208 414 gfYSKDLILEAGL--ASIS-NLLSIILALIATLLTAVYSF 450
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-327 |
5.94e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 58.40 E-value: 5.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 111 TANELILFYILFEATLIPTLIIItrwGNQTERLN---AGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMnlwlkeLP 187
Cdd:PRK12644 124 TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL------LA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 188 NSWSSNLLWMA--CIMAFMV-KMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITiildP---TTKSMAYP 260
Cdd:PRK12644 195 DPPTGPAVSVAvvLILVGALsKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PgfaDVPVWRPT 269
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267399746 261 FLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12644 270 VLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-406 |
6.07e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 58.18 E-value: 6.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 75 LMIMASQYHLKKEPWLRKKSYLSMLISLQVFLVMTftANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTL 154
Cdd:PRK08376 105 LAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAI--TGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 155 IGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSWSSNLLWMAcIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLaaV 234
Cdd:PRK08376 183 LASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALF-IAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--L 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 235 LLKLGG-YGMMRITI-ILDPTTKSMAYPFLMLCL--WGMIMTSSICLRQTDLKSLIAYSSVS---HMAL---VIVAILIQ 304
Cdd:PRK08376 260 VIKQAGlYALARVLFsIYGPAINLATVGWVIIILgcLTMFVGVAMAVVQKDVKRLLAYHSVSqigYMLLglgVGLAALGD 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 305 TPWSFMGATAL------MIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGE 378
Cdd:PRK08376 340 PAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASK 419
|
330 340
....*....|....*....|....*....
gi 2267399746 379 LFVMMASFSWSNI-SIILMGLNMLITALY 406
Cdd:PRK08376 420 WLIYESSALFNPIlGVIAMIGSVLTLASF 448
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-455 |
2.62e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 56.11 E-value: 2.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 95 YLSMLISLQVFLVMTFTaNELILFYILFEATLIPTLIIITRWGNQTERLNAGL-YFLFYTLIGSLPLL-VALIHLQNsmG 172
Cdd:TIGR01770 105 YILLLFALLGIFLLVSS-NDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGLLLFgISLIYGFT--G 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 173 SLNLLTMNLWLKELPNSWSSNLLWMACIM-AFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILD 251
Cdd:TIGR01770 182 SLNFEDLLLFLSNGMLNISLLLLGIVLILvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 252 PTTKSMAYPFLMLC-LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTS----SML 326
Cdd:TIGR01770 262 FGFSEAWQIFLAIIaFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 327 FCLANSNYERIHSrtMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISI-ILMGLNMLITAL 405
Cdd:TIGR01770 342 SLLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLaVIAVLTSVIGAF 419
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2267399746 406 YSL----YMLITTQRGKPTFHTHNLNPSFtrentLMSMHMLPLLFLTLNPKTIL 455
Cdd:TIGR01770 420 YYLrvvkVMYFDKPERRIPSNPQSKAQSL-----LLSISALFILFLGLFPSLIL 468
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-371 |
1.68e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 53.68 E-value: 1.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 75 LMIMASQYHLKKEPWLRKKSYLsmLISLQVFLVMTFTANELILFyILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTL 154
Cdd:PRK12649 96 IMSYSNGYMSHKEDLPRYYQYL--LLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 155 IGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSWSSNLLWMACIMAFM---VKMPLYGFHLWLPKAhVEAPIAGSMVL 231
Cdd:PRK12649 173 GGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFL 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 232 -AAVLLKLGGYGMMRITIILDPTTKSmaypFLMLCLWGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTP- 306
Cdd:PRK12649 252 hSATMVKAGVYLVARIHPIFSGTEAW----FILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYh 327
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267399746 307 ---WSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK12649 328 epgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-390 |
2.93e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 52.91 E-value: 2.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 155 IGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPnswSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAV 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 235 LLKLGGYGMMRITIIldpttkSMAYPF---LMLCLWGMImTSSI----CLRQTDLKSLIAYSSVSHMALV-------IVA 300
Cdd:PRK08042 222 VMKIGLLGILTLSLL------GGNAPLwwgVALLVLGMI-TAFVgglyALMEHNIQRLLAYHTLENIGIIllglgagVTG 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 301 ILIQTP----WSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLI 376
Cdd:PRK08042 295 IALEQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFA 374
|
250
....*....|....
gi 2267399746 377 GELFVMMASFSWSN 390
Cdd:PRK08042 375 GEWVIYQSFFKLSN 388
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
91-408 |
9.59e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 51.23 E-value: 9.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 91 RKKSYLSMLISLQVFLVmtfTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNS 170
Cdd:MTH00020 112 RFMSYLSLFTFLMVVLV---TSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDR 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 171 MGSLNLLTMnlwLKELPNSWSSNLLWMaCIMAF---MVKMPLYGFHLWLPKAH-----VEAPI-AGSMVLAAV------- 234
Cdd:MTH00020 189 FGSLDFSSV---FNMVVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVfllirss 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 235 -LLKLGGYGMMRITIILDPTTksmaypflmlclwgmIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGAT 313
Cdd:MTH00020 265 pLFEQAPLALIIVTIVGSLTV---------------FFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 314 ALMIAHGLTSSMLFCLANSnyeRIHS----RTMLLARGLQTLLPLMATWWLLASLTNLALP-----PSINLIGELfvmmA 384
Cdd:MTH00020 327 FHLMNHAFFKALLFLSAGS---VIHAlsdeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPyltgfYSKDLILEL----A 399
|
330 340
....*....|....*....|....*
gi 2267399746 385 SFSWSNISIILMG-LNMLITALYSL 408
Cdd:MTH00020 400 FGQYYLIFAYWLGcFSALLTAFYSI 424
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-327 |
1.13e-06 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 51.05 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 136 WGNQTER-LNAGL-YFLFYTLIGSLpLLVALIHLQNSMGSLNLLTMNlwlkelpnSWSSNLLWMACImAFMVKMPLYGFH 213
Cdd:PRK12668 134 WARGTKAaVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAFGAIA--------GLGGTAAWLILI-GFGVNAAFPPLH 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 214 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRitiildpttksmAYPFLMLCLW-GMIMT---SSICLRQTDLKSLIAYS 289
Cdd:PRK12668 204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALAR------------AFPGTELLIYiGAAMAvygVFFALLENDLRRLLSYH 271
|
170 180 190
....*....|....*....|....*....|....*...
gi 2267399746 290 SVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12668 272 IVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
75-323 |
1.40e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.50 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 75 LMIMASQYHLKKEPWLRKKSYLSMLISLQVFLVMTFtANELILFYILFEATLIPTLIIITRWGNQTERLNAGL-YFLFYT 153
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMAS-ANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 154 LIGSLPLL-VALIHLqnSMGSLNLLTMNLWLKELPNSwsSNLLWMACIM---AFMVKMPLYGFHLWLPKAHVEAPIAGSM 229
Cdd:COG1007 164 LSSGFLLYgISLLYG--ATGSLNLAGIAAALAAGGAN--SPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 230 VLAAVLlKLGGYGM-MRI-TIILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPW 307
Cdd:COG1007 240 FLATAP-KIAAFAAlLRLlVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPL 318
|
250
....*....|....*.
gi 2267399746 308 SFMGATALMIAHGLTS 323
Cdd:COG1007 319 GVSAALFYLLAYLFMN 334
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-393 |
4.09e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 49.19 E-value: 4.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKEPWL-RKKSYLSMLISLQVFLVmtfTANELILFYILFEATLIPTLIIITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVpRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 138 NQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELP---NSWSSNLLWMACIMAFMV--------- 205
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGimdRGYYGGGAYESPLAPFAIigillligc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 206 --KMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITiildPTTKSMAYPFLMLCLWGMI---MTSSICLRQT 280
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 281 DLKSLIAYSSVSHMALVIVAILIQTpwSFMGATALMIAHGLTSSMLFCLANSnyeRIHSRT-----MLLARGLQTLLPLM 355
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGS---VIHSTTvdeqdMRKMGGLIHSIPFT 386
|
330 340 350
....*....|....*....|....*....|....*...
gi 2267399746 356 ATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISI 393
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
91-385 |
1.40e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.48 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 91 RKKSYLSMLISLQVF-LVMTFTANELILFYILFEATLIPTLIIITRWGNQTErlnAGLYFLFYTLIGSLPLLVALIHLQN 169
Cdd:PRK06459 69 HYGKWLSSLYILTILgMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 170 SMGSLNLltmnlwlkelpNSWSSNLLWMACIMAFMVKMPLYGFHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIT 247
Cdd:PRK06459 146 ISGTTNF-----------SYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMT 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 248 IILDPTTKSMAYPFLMLCLWGMIMTSSICLRQTD-LKSLIAYSSVSHMALVIVAI--------LIQTPWSFMGATALM-- 316
Cdd:PRK06459 215 ILTQTIPIGYFGLTILAIGAFSILFGALYAYVSEnVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVILys 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 317 IAHGLTSSMLFC------------LANSNYERIHSRTMLLARGLQTLLPL---MATWWLLASLTNLALpPSINLIGELFV 381
Cdd:PRK06459 295 FAHSVAKTGLFLssglqekqsitySKKIRNRWIELGLTLLASSLSGLLPNiggVASWLLLESLFMFAY-VLHNVISILFI 373
|
....
gi 2267399746 382 MMAS 385
Cdd:PRK06459 374 VTGA 377
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
95-408 |
7.43e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.81 E-value: 7.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 95 YLSMLISLQVFLVMTFtANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSL 174
Cdd:PRK05777 106 YLLVLFALLGMMVMVS-ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 175 NLLTMNLWLKElpNSWSSNLLWMACIM---AFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRITIIL 250
Cdd:PRK05777 185 SFAGIAKALAD--GSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVA 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 251 DPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTS----SM 325
Cdd:PRK05777 262 FGGLSEDWQQVLAiIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTlgafGV 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 326 LFCLANSNYERIHSRTMllaRGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISI-ILMGLNMLITA 404
Cdd:PRK05777 342 ISLLRRKGGEAESISDF---AGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLaVIGVLNSAIGA 418
|
....
gi 2267399746 405 LYSL 408
Cdd:PRK05777 419 FYYL 422
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
80-301 |
7.84e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 44.94 E-value: 7.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 80 SQYHLKKEPwlRKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00211 99 SLWYMSSEP--NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 160 LLVALIHLQNSMGSLNLLTMnlwlkeLPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAhVEAPIAGS-------MVLA 232
Cdd:MTH00211 177 LLLSMVWLLLNLNSWEISQL------FILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVA 249
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267399746 233 AVLLklggygMMRITIILDPTTKSMAypfLMLCLWG--MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI 301
Cdd:MTH00211 250 GVFL------LIRLSPLFQNNQLILG---AVLLLGAltMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTL 311
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
1.35e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 44.07 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 137 GNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSwSSNLLWMACIM---AFMVKMPLYGFH 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAA-DRALLEAGAALllvVFLIKAAMWPLN 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 214 LWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRI-TIILDPTTKSMAYPFLMLCLWGMIMTSSI----CLRQTDLKSLI 286
Cdd:PRK12666 231 FWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRLA 307
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2267399746 287 AYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-327 |
2.02e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 43.48 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 112 ANELILFYILFEATLIPTLIIITRWGNQTERLNAGL-YFLFYTLIGSLPLL-VALIHLQNSMGSLNLLTMNLWLKELPNS 189
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVLNSGQSFSS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 190 WSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMMRITIILDPTTKSmaypFLMLCLWGM 269
Cdd:MTH00196 92 VSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNI----LLIGGLFSL 163
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2267399746 270 IMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:MTH00196 164 FVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
3.35e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.63 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 262 LMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 2267399746 342 MLLARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
59-371 |
5.11e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 39.24 E-value: 5.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 59 DPLSSPLLML-TMWLLPLMIMASQYHLKKEPWLRKKSYLSMLISLQVFLVMTftaNELILFYILFEATLIPTLIIITRWG 137
Cdd:PRK07376 90 DPLGAVMLVLvTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVIS---PNLVQIYVFWELVGMCSYLLVGFWY 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 138 NQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNLWLKELPNSwSSNLLWMACIMAFMVKM---------P 208
Cdd:PRK07376 167 DRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSS-GAVSGWLALLLCILVFLgpmaksaqfP 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 209 LygfHLWLPKAhVEAPI-------AGSMVLAAVLLklggygMMRITIILDPttksmaYPFLMLCL-WGMIMTS----SIC 276
Cdd:PRK07376 246 L---HVWLPDA-MEGPTpisalihAATMVAAGVFL------VARMYPVFEQ------FPAVMTVIaWTGAITAflgaSIA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 277 LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSfmGATALMiAHGLTSSMLFCLANS---------NYERIHSRTMLLARG 347
Cdd:PRK07376 310 LTQNDIKKGLAYSTISQLGYMVMAMGCGAYSA--GLFHLM-THAYFKAMLFLGSGSvihgmeevvGHDPVLAQDMRLMGG 386
|
330 340
....*....|....*....|....
gi 2267399746 348 LQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK07376 387 LRKYMPITAITFLIGCLAISGIPP 410
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-297 |
5.56e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.99 E-value: 5.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 91 RKKSYLSMLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNS 170
Cdd:PRK06591 113 RKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIAS-GNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSI 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 171 MGSLNLLTMNLWLKELPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIT-II 249
Cdd:PRK06591 192 TGSLNMTDIAAYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTyII 271
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2267399746 250 LDPTTKSMAYPFLM--LCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK06591 272 IGYETIKTAITNFIrpIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV 321
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
98-455 |
9.40e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 38.03 E-value: 9.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 98 MLISLQVFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALihlqnsmgsLNLL 177
Cdd:MTH00200 9 FILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGL---------LNAW 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 178 TMNLWLkelPNSWSSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLlKLGGYgMMRITIILDPTTKSM 257
Cdd:MTH00200 80 TSGQWG---ISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAPF-ALLIQLAPALNSNIL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 258 AYPFLMLCLWGMIMTssicLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANSNYERI 337
Cdd:MTH00200 155 LLLGLLSVLVGGWGG----LNQTQLRKILAYSSIAHLGWLLSGLVYS---PNLALLYLLLYVIITLTVFLLLNLLNSTKI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399746 338 HSRTMLLarglqTLLPLMATWWLLASLTNLALPPSINLIGELFVMMA----SFSWSNISIILMGLNMLITALYSLYMLIT 413
Cdd:MTH00200 228 NSLSSSK-----TKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQElskqGLFIYATILLLGSLLSLFFYLRLSYLTLL 302
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2267399746 414 TQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTIL 455
Cdd:MTH00200 303 TLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLF 344
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