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Conserved domains on  [gi|2267399877|gb|UTE83111|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Propithecus deckenii coronatus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 539.98  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877   1 MFTLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALF 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  81 IALIMWTPLPLPQPLINMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 161 TLSTLITTQEFTWLIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267399877 241 LFLGTLYNPYMPQAYSTMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 539.98  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877   1 MFTLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALF 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  81 IALIMWTPLPLPQPLINMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 161 TLSTLITTQEFTWLIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267399877 241 LFLGTLYNPYMPQAYSTMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
16-305 3.46e-107

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 314.41  E-value: 3.46e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 I--NMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 174 LIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMPq 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPL- 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267399877 254 AYSTMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-299 2.04e-95

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 285.49  E-value: 2.04e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:COG1005    25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 I--NMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQE-FT 172
Cdd:COG1005   105 VlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 173 WLIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMP 252
Cdd:COG1005   185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267399877 253 QAYST-----MFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   265 LPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 539.98  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877   1 MFTLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALF 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  81 IALIMWTPLPLPQPLINMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 161 TLSTLITTQEFTWLIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267399877 241 LFLGTLYNPYMPQAYSTMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 16-318 7.05e-176

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 489.41  E-value: 7.05e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00111   21 AVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPL 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 INMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTWLI 175
Cdd:MTH00111  101 ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMPQAY 255
Cdd:MTH00111  181 FSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPELF 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267399877 256 STMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPPQM 318
Cdd:MTH00111  261 TINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-317 2.91e-169

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 472.57  E-value: 2.91e-169
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00071   21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 INMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTWLI 175
Cdd:MTH00071  101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMPQAY 255
Cdd:MTH00071  181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELS 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2267399877 256 STMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPPQ 317
Cdd:MTH00071  261 TMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-318 6.32e-167

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 466.78  E-value: 6.32e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00134   22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 INMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTWLI 175
Cdd:MTH00134  102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMPQAY 255
Cdd:MTH00134  182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELT 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267399877 256 STMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPPQM 318
Cdd:MTH00134  262 TINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 16-316 7.95e-136

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 387.34  E-value: 7.95e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00218   18 AVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSL 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 INMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTWLI 175
Cdd:MTH00218   98 INLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYmpqay 255
Cdd:MTH00218  178 IPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTI----- 252

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267399877 256 stMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPP 316
Cdd:MTH00218  253 --NLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 16-316 5.44e-135

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 385.87  E-value: 5.44e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00040   20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 INMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTWLI 175
Cdd:MTH00040  100 LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLL 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFL--GTLYNPYMPQ 253
Cdd:MTH00040  180 FPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLggGSPFNEIFPI 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267399877 254 AYSTMfATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPP 316
Cdd:MTH00040  260 NIIIV-GIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 16-313 1.98e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 327.85  E-value: 1.98e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00195   18 AVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGF 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 INMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTWLI 175
Cdd:MTH00195   98 SSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVI 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLflgtlynpYMPQAY 255
Cdd:MTH00195  178 LLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTIL--------FLGGGG 249

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2267399877 256 STMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSG 313
Cdd:MTH00195  250 TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
NADHdh pfam00146
NADH dehydrogenase;
16-305 3.46e-107

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 314.41  E-value: 3.46e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 I--NMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 174 LIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMPq 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPL- 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267399877 254 AYSTMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 18-310 1.46e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 312.86  E-value: 1.46e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  18 AFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPLIN 97
Cdd:MTH00193   20 AFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLIS 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  98 MNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTWLIIP 177
Cdd:MTH00193  100 FNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFF 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 178 SWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYnpympqaYST 257
Cdd:MTH00193  180 SFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDL-------LSL 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2267399877 258 MFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPIL 310
Cdd:MTH00193  253 LFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 16-302 8.87e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 311.03  E-value: 8.87e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00143   17 AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSS 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 INMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTWLI 175
Cdd:MTH00143   97 SYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLG 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMpqAY 255
Cdd:MTH00143  177 FLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVLFL--LG 254

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 2267399877 256 STMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
Cdd:MTH00143  255 GVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-316 2.53e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 297.79  E-value: 2.53e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQP- 94
Cdd:MTH00054   18 SIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYGEGv 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  95 -LINMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTW 173
Cdd:MTH00054   98 vLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIW 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 174 LIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMPQ 253
Cdd:MTH00054  178 FIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPT 257

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2267399877 254 AY---STMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPP 316
Cdd:MTH00054  258 SYfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-307 1.76e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 295.02  E-value: 1.76e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877   1 MFTLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALF 80
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  81 IALIMWTPLPLPQPLINMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSF 160
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 161 TLSTLITTQEFTWLIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267399877 241 LFLGTLYNpympqAYSTMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00225  242 LFFGGFFV-----TIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 16-316 5.35e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 289.33  E-value: 5.35e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00216   22 AVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYERGV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 I--NMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQ-EFT 172
Cdd:MTH00216  102 LisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQnNGI 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 173 WLIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMP 252
Cdd:MTH00216  182 WFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSPIKY 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2267399877 253 -QAYSTMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPP 316
Cdd:MTH00216  262 fKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-299 2.04e-95

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 285.49  E-value: 2.04e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:COG1005    25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 I--NMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQE-FT 172
Cdd:COG1005   105 VlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 173 WLIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMP 252
Cdd:COG1005   185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267399877 253 QAYST-----MFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   265 LPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
18-303 6.42e-92

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 276.30  E-value: 6.42e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  18 AFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQ--PL 95
Cdd:PRK06076   28 AFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFGPelVI 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 INMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTWLI 175
Cdd:PRK06076  108 ADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNI 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMPQAY 255
Cdd:PRK06076  188 IPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFPLGGG 267

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2267399877 256 ---STMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:PRK06076  268 ipgAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 16-311 2.06e-85

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 259.33  E-value: 2.06e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00010   19 AMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPS 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 INMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFtWLI 175
Cdd:MTH00010   99 FFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS-WIL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 176 IPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLflgtlynpYMPQAY 255
Cdd:MTH00010  178 LMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF--------FTSFIP 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267399877 256 STMFATKALLLIT-----LFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILS 311
Cdd:MTH00010  250 SIFISDLMLILKTvflafLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 16-316 2.23e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 255.33  E-value: 2.23e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQP- 94
Cdd:MTH00029   23 SVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGv 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  95 -LINMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTW 173
Cdd:MTH00029  103 fLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVW 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 174 LIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTT-------------- 239
Cdd:MTH00029  183 LIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTifflggwlspldgi 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267399877 240 --TLFLGTLYNPYMPQAYSTMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGVPP 316
Cdd:MTH00029  263 ptPPEAFSIFEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-307 3.46e-56

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 183.56  E-value: 3.46e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  16 AMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPL 95
Cdd:MTH00090   12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  96 INMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLStlittQEFTWLI 175
Cdd:MTH00090   92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV-----SSFSLSL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 176 IPSWplaMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLflgtlynpympqaY 255
Cdd:MTH00090  167 FVIY---LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVL-------------F 230

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267399877 256 STMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00090  231 FKFSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-298 3.13e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 158.16  E-value: 3.13e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  18 AFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPLIN 97
Cdd:MTH00058   19 AFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSY 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  98 MNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEFTWLIIP 177
Cdd:MTH00058   99 SSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLFP 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 178 swPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYtniIMMNVLTTTLFLgtlynpYMPQAYST 257
Cdd:MTH00058  179 --LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEY---LIIFIFSWLGSV------LFFGGGFV 247

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2267399877 258 MFATKALLLitLFLWVRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058  248 SIMLLFHLL--FFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 23-298 1.83e-38

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 139.32  E-value: 1.83e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  23 IERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPLI--NMNM 100
Cdd:CHL00032   50 LEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVlaDLSI 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 101 GVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQE----FTWLIi 176
Cdd:CHL00032  130 GVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSkygfWGWNL- 208

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 177 psW--PLA-MMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIM--MNVLTTTLFLGTLYNPYM 251
Cdd:CHL00032  209 --WrqPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVssLFVTVLYLGGWNLSIPYI 286

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267399877 252 P-------QAYSTMFATKALLLITL-----FLWV----RASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:CHL00032  287 FipelfeiNKTGGVFGTTIGIFITLaktylFLFIsittRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-305 1.80e-22

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 95.25  E-value: 1.80e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  19 FLILIERKILGYMQLRKGPnivgphGLLQPFADAMKLFIKEPLRPLTSSTLLYItAPTLAL--FIALIMWTPLPLPQPLI 96
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFRA-APYVALaaMLLAALLVPVLTTGPPL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877  97 NMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQE---FTW 173
Cdd:COG0650    93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAahgPLL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267399877 174 LIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPF*LFFMAEYTNIIMMNVLTTTLFLGTLYNPYMPQ 253
Cdd:COG0650   173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIALTLLL 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2267399877 254 AYSTMFAtKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:COG0650   253 ALLLFLL-KLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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