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Conserved domains on  [gi|2294228342|gb|UVY96465|]
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ATP synthase F0 subunit 6, partial (mitochondrion) [Osmia melanocephala]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 8.17e-69

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 210.02  E-value: 8.17e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   1 MMNLFETFDPATSIIFSLNWISLMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  81 SNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228342 161 ANMIAGHLLLTLLGTFISKF-LILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 8.17e-69

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 210.02  E-value: 8.17e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   1 MMNLFETFDPATSIIFSLNWISLMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  81 SNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228342 161 ANMIAGHLLLTLLGTFISKF-LILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-216 9.06e-34

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 120.77  E-value: 9.06e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   4 LFETFDPATSIIFSLNWISLMLIFIMLPM------NFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIF 77
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIFlissslSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  78 IALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAI 157
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228342 158 RLTANMIAGHLLLTLLGTFISKFLI--LFPFMILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSsaIFALLLLILVALIILEIFVAFIQAYVFTLLTCLY 221
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 64-217 1.25e-31

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 112.88  E-value: 1.25e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  64 YKMNILIFLSLMIFIALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMI 143
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228342 144 ELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFL-ILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLsSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 23-217 8.34e-24

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 94.37  E-value: 8.34e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  23 LMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIALSNFMGLFPYIFTTTSHMSFNLI 102
Cdd:COG0356    13 LLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342 103 IALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISkFLI 182
Cdd:COG0356    93 LALIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAP-FLL 171

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 2294228342 183 LFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:COG0356   172 LGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
ATP-synt_A pfam00119
ATP synthase A chain;
20-217 4.70e-22

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 89.86  E-value: 4.70e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  20 WISLMLIFIMLPMNFW----IIPSRFEMLFILIFQIIFNEFKS-LTKKKYKMNILIFLSLMIFIALSNFMGLF---PYIF 91
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDnIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  92 TTTSHMSFNLIIALSSWLSFFIYSWMNKPLL-MLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLL 170
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHGLGgYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2294228342 171 TLLGTFISKFL----ILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:pfam00119 165 LLLAGLIFALLsagfLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYI 215
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 8.17e-69

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 210.02  E-value: 8.17e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   1 MMNLFETFDPATSIIFSLNWISLMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  81 SNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228342 161 ANMIAGHLLLTLLGTFISKF-LILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-216 9.06e-34

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 120.77  E-value: 9.06e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   4 LFETFDPATSIIFSLNWISLMLIFIMLPM------NFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIF 77
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIFlissslSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  78 IALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAI 157
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228342 158 RLTANMIAGHLLLTLLGTFISKFLI--LFPFMILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSsaIFALLLLILVALIILEIFVAFIQAYVFTLLTCLY 221
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-216 3.35e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 119.37  E-value: 3.35e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   1 MMNLFETFDPATSIIFS---LNWISLMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIF 77
Cdd:MTH00176    2 LVDLFSSFDPPNKNIFSmisLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFIL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  78 IALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAI 157
Cdd:MTH00176   82 VMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAV 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2294228342 158 RLTANMIAGHLLLTLLGTFISKFL----ILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00176  162 RLAANLSAGHLLLGLLGAAMWGLLpvspLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLY 224
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-219 4.44e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 116.08  E-value: 4.44e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   1 MMNLFETFDPATSIIFSLNWISLMLIFIMLP-MNFWIIPSRFEMLFI-LIFQIIFNEFKSLTKKKYKMNiLIFLSLMIFI 78
Cdd:MTH00120    2 NLNFFDQFSSPELLGIPLILLAMLIPALLIPsPKNRLLTNRLTTLQLwLIKLITKQLMLPLNKKGHKWA-LILTSLMLLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  79 ALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIR 158
Cdd:MTH00120   81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228342 159 LTANMIAGHLLLTLLGT----FISKFLILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00120  161 LTANLTAGHLLIQLISTatlnLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 64-217 1.25e-31

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 112.88  E-value: 1.25e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  64 YKMNILIFLSLMIFIALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMI 143
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228342 144 ELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFL-ILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLsSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-219 8.08e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 110.42  E-value: 8.08e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   1 MMNLFETFDPATSIIFSLNWISLMLIFIMLPM-NFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIA 79
Cdd:MTH00179    2 MLSMFDQFESPSLLGIPLLALALLLPWLLFPSlTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  80 LSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRL 159
Cdd:MTH00179   82 TLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2294228342 160 TANMIAGHLLLTLLGT------FISKFLILFPFMILIqnMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00179  162 TANITAGHLLMHLISSavfvlmNFMGMVALLTLLVLF--LLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-220 2.84e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 109.18  E-value: 2.84e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   1 MMNLFETFDPATSIIFSLN---WISLMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIF 77
Cdd:MTH00173    2 MVDLFSSFDDHNSSFSSLSflmWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  78 IALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAI 157
Cdd:MTH00173   82 LISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTV 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2294228342 158 RLTANMIAGHLLLTLLGTFISKFLILFPFMI-----LIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00173  162 RLLANISAGHIVLTLIGNYLSSSLFSSSVVSlllvlLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 3-216 8.34e-29

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 107.73  E-value: 8.34e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   3 NLFETFDPATSIIFSLNWISLMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIALSN 82
Cdd:MTH00101    4 NLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTN 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  83 FMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLTAN 162
Cdd:MTH00101   84 LLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTAN 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342 163 MIAGHLLLTLLG------TFISKFLILFPFMILIqnMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00101  164 ITAGHLLIHLIGgatlalMSISTTTALITFIILI--LLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-216 8.35e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 107.90  E-value: 8.35e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   1 MMNLFETFDPATSIIF-----SLNWISLMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLM 75
Cdd:MTH00005    2 LTDIFSSFDPATNSLFnnlssTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  76 IFIALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTL 155
Cdd:MTH00005   82 TMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228342 156 AIRLTANMIAGHLLLTLLGTFISKFLILFPF----MILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00005  162 SFRLAANMSAGHIVLSLIGIYAASALFSSISstilLILTQMGYILFEVGICLIQAYIFCLLLSLY 226
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 69-220 3.70e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 103.41  E-value: 3.70e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  69 LIFLSLMIFIALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISN 148
Cdd:MTH00132   71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2294228342 149 IIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILFP----FMILIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPtvaiLTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-219 6.02e-26

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 100.43  E-value: 6.02e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342   3 NLFETFDPATSIIFSLNWISLML----IFIMLPMNFwiIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFI 78
Cdd:MTH00035    6 SIFGQFSPDTILFIPLTLLSSVIalswLFFINPTNW--LPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  79 ALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIR 158
Cdd:MTH00035   84 LSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLR 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228342 159 LTANMIAGHLLLTLLGT----FISKFLILFPFMILIQnMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00035  164 LAANLTAGHLLIFLLSTaiweLSNSPLISIITLIIFF-LLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 69-219 6.91e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 97.34  E-value: 6.91e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  69 LIFLSLMIFIALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISN 148
Cdd:MTH00073   71 LILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2294228342 149 IIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILFP------FMILIqnMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00073  151 FIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMPtvsiltMIVLF--LLTLLEIAVAMIQAYVFVLLLSLYLQE 225
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 23-217 8.34e-24

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 94.37  E-value: 8.34e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  23 LMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIALSNFMGLFPYIFTTTSHMSFNLI 102
Cdd:COG0356    13 LLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342 103 IALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISkFLI 182
Cdd:COG0356    93 LALIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAP-FLL 171

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 2294228342 183 LFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:COG0356   172 LGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
ATP-synt_A pfam00119
ATP synthase A chain;
20-217 4.70e-22

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 89.86  E-value: 4.70e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  20 WISLMLIFIMLPMNFW----IIPSRFEMLFILIFQIIFNEFKS-LTKKKYKMNILIFLSLMIFIALSNFMGLF---PYIF 91
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDnIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  92 TTTSHMSFNLIIALSSWLSFFIYSWMNKPLL-MLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLL 170
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHGLGgYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2294228342 171 TLLGTFISKFL----ILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:pfam00119 165 LLLAGLIFALLsagfLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYI 215
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 21-216 4.05e-19

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 82.15  E-value: 4.05e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  21 ISLMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIALSNFMGLFP-YIFTTTSHMSF 99
Cdd:PRK05815   26 LILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINV 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342 100 NLIIALSSWLSFFIYSWMNKPLLMLIHlvplNTPLALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISK 179
Cdd:PRK05815  106 TLALALIVFVLVIYYGIKKKGLGGYLK----EFYLQPHPLLLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGGA 181

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 2294228342 180 FLILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK05815  182 GLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 16-217 1.35e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 81.21  E-value: 1.35e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  16 FSLNWISLMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIALSNFMGLFPYIFTTTS 95
Cdd:MTH00175   31 SSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTA 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  96 HMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGT 175
Cdd:MTH00175  111 HIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSG 190

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2294228342 176 F-----ISKFLILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:MTH00175  191 FafnmlSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYL 237
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 17-216 1.34e-17

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 78.16  E-value: 1.34e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  17 SLNWISLMLIFIMLPMNFWIIPSRFEmlfiLIFQIIFNEFKSLTKKKYKMNILIFL----SLMIFIALSNFMGLFPYIFT 92
Cdd:MTH00172   21 SIMMILVIIVVLLLFKGIKLIPKRWQ----SIIEIIYNHFHGVVKDNLGNEGLKYFpfiiSLFFFIVFLNLLGLFPYVFT 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  93 TTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTL 172
Cdd:MTH00172   97 PTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAI 176

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 2294228342 173 LGTFISKFLI----LFPFMILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00172  177 LAGFGFNMLCasgfLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 72-216 1.24e-12

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 65.92  E-value: 1.24e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  72 LSLMIFIALSNFMGLFPYIFTTTSHMSFNLIIALsswLSFFIYSWMN-KPLLM---LIHLVPlNTPLALMNFMVMIELIS 147
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAiKAHGIkgyLAHLTG-GTHWSLWIIMIPIEFIG 250

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2294228342 148 NIIRPFTLAIRLTANMIAGHL-------LLTLLGTFISKFLILFPFMILIqnmlMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13419  251 LFTKPFALTVRLFANMTAGHIvilslifISFILKSYIVAVAVSVPFAIFI----YLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 33-220 1.06e-11

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 62.26  E-value: 1.06e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  33 NFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFF 112
Cdd:MTH00174   56 NNTLVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTT 135

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342 113 IYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFL-------ILFP 185
Cdd:MTH00174  136 LAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMIntgiligSFVP 215

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 2294228342 186 FMILIqnMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00174  216 FAILI--FVTILEMAVAIIQAYVFTLLTIVYLRDT 248
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 62-219 2.78e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 54.60  E-value: 2.78e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  62 KKYKMNILIFLSLMIFIALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKplLMLIHLVPLNTPLALMNF-M 140
Cdd:MTH00087   46 NKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSKGSDSFLKTFsM 123

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2294228342 141 VMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILFPFMILiqnmlmiLEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00087  124 LFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSILAIM-------MECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 92-216 3.79e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 49.89  E-value: 3.79e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  92 TTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLALMNFMVMIELI-SNIIRPFTLAIRLTANMIAGHLLL 170
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2294228342 171 TLLGTFISKF--LILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13417  297 LALMGFIFQFqsWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 21-216 7.09e-06

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 45.50  E-value: 7.09e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  21 ISLMLIFIMLPMNFWIIPSRFEMLFILIFQIIFNEFKSLTKKKYKMNILIFLSLMIFIALSNFMGLFPYIFTTTSHMSFN 100
Cdd:PRK13420   28 IVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSPTADLSVT 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342 101 LIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPlalmnFMVMIELISNIIRPFTLAIRLTANMIAGHllltllgtfISKF 180
Cdd:PRK13420  108 AALALLVFFSVHWFGIRAEGLREYLKHYLSPSP-----FLLPFHLISEITRTLALAVRLFGNIMSLE---------LAAL 173

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 2294228342 181 LILFPFMILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13420  174 LVLLVAGFLVPVPILMLHIIEALVQAYIFGMLALIY 209
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 36-213 1.51e-03

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 37.94  E-value: 1.51e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  36 IIPSRFEMLFILIFQIIFNefksltkkkykMNILIFLSLMIFIALSNFMGL-FPYIFTTTSHMSFNLIIALSSWLSFFIY 114
Cdd:MTH00050    1 MFVNDFSSLFSLIYKLILG-----------GSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLS 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342 115 SWMNKPLLMLIHLVPLNTPLALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILFPFMILiqnmL 194
Cdd:MTH00050   70 RVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLGCFGGVALGNLCFISYWWFLVLFF----L 145

                         170       180
                  ....*....|....*....|
gi 2294228342 195 MILEIAVSMIQAY-VFSILS 213
Cdd:MTH00050  146 FFYEVFVALVHWFiVSSILS 165
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 73-216 1.65e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 38.52  E-value: 1.65e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228342  73 SLMIFIALSNFMGLFPYIFTTTSHMSFNLIIALSSWLSFFIYSWMNKPLLMLIHLVPLNTPLalmnfMVMIELISNIIRP 152
Cdd:PRK13421   83 TLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGVRARGVRGYLATFAEPTWV-----MIPLNLVEQLTRT 157

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2294228342 153 FTLAIRLTANMIAGhllLTLLGTFISKFLILFPFMiliqnmLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13421  158 FSLIVRLFGNVMSG---VFVIGIVLSLAGLLVPIP------LMALDLLTGAVQAYIFAVLAMVF 212
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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