NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2294228348|gb|UVY96468|]
View 

ATP synthase F0 subunit 6, partial (mitochondrion) [Osmia ribifloris biedermannii]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 2.70e-72

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 218.88  E-value: 2.70e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   1 MMNLFESFDPTTSMNFSFNWLSLMLIFIIIPMNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  81 NNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228348 161 ANMIAGHLLLTLLGTFISKF-LILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 2.70e-72

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 218.88  E-value: 2.70e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   1 MMNLFESFDPTTSMNFSFNWLSLMLIFIIIPMNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  81 NNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228348 161 ANMIAGHLLLTLLGTFISKF-LILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-216 5.57e-38

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 131.56  E-value: 5.57e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   4 LFESFDPTTSMNFSFNWLSLMLIFIIIPM------NFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIF 77
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIFlissslSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  78 IALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAI 157
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228348 158 RLTANMIAGHLLLTLLGTFISKFLI--LLPFTILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSsaIFALLLLILVALIILEIFVAFIQAYVFTLLTCLY 221
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 64-217 1.81e-35

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 122.89  E-value: 1.81e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  64 YKMNILIFFSLMIFIALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMI 143
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228348 144 ELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFL-ILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLsSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 23-217 8.08e-25

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 96.68  E-value: 8.08e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  23 LMLIFIIIPMNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIALNNFMGLFPYIFTPTSHMSFNLI 102
Cdd:COG0356    13 LLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348 103 IALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISkFLI 182
Cdd:COG0356    93 LALIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAP-FLL 171

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 2294228348 183 LLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:COG0356   172 LGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
ATP-synt_A pfam00119
ATP synthase A chain;
20-217 7.14e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 94.48  E-value: 7.14e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  20 WLSLMLIFIIIPMNFW----IIPSRL----EILIMYISQIIFyefKSITKKKYKMNILIFFSLMIFIALNNFMGLF---P 88
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLqnfvEMLVEFVDNIVK---DNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  89 YIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMK-MLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLTANMIAGH 167
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHGLGgYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2294228348 168 LLLTLLGTFISKFL----ILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:pfam00119 162 LLLLLLAGLIFALLsagfLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYI 215
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 2.70e-72

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 218.88  E-value: 2.70e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   1 MMNLFESFDPTTSMNFSFNWLSLMLIFIIIPMNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  81 NNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228348 161 ANMIAGHLLLTLLGTFISKF-LILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-216 5.57e-38

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 131.56  E-value: 5.57e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   4 LFESFDPTTSMNFSFNWLSLMLIFIIIPM------NFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIF 77
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIFlissslSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  78 IALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAI 157
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228348 158 RLTANMIAGHLLLTLLGTFISKFLI--LLPFTILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSsaIFALLLLILVALIILEIFVAFIQAYVFTLLTCLY 221
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 3-216 3.90e-36

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 126.61  E-value: 3.90e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   3 NLFESFDPTTSMNFSFNWLSLMLIFIIIPMNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIALNN 82
Cdd:MTH00101    4 NLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTN 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  83 FMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLTAN 162
Cdd:MTH00101   84 LLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTAN 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348 163 MIAGHLLLTLLG------TFISKFLILLPFTILIqnMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00101  164 ITAGHLLIHLIGgatlalMSISTTTALITFIILI--LLTILEFAVALIQAYVFTLLVSLY 221
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 64-217 1.81e-35

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 122.89  E-value: 1.81e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  64 YKMNILIFFSLMIFIALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMI 143
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228348 144 ELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFL-ILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLsSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-219 6.37e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 123.40  E-value: 6.37e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   1 MMNLFESFDPTTSMNFSFNWLSLMLIFIIIP-MNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIA 79
Cdd:MTH00120    2 NLNFFDQFSSPELLGIPLILLAMLIPALLIPsPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  80 LNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRL 159
Cdd:MTH00120   82 LINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2294228348 160 TANMIAGHLLLTLLGT----FISKFLILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00120  162 TANLTAGHLLIQLISTatlnLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-219 1.14e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 123.13  E-value: 1.14e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   1 MMNLFESFDPTTSMNFSFNWLSLMLIFIIIPM-NFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIA 79
Cdd:MTH00179    2 MLSMFDQFESPSLLGIPLLALALLLPWLLFPSlTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  80 LNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRL 159
Cdd:MTH00179   82 TLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2294228348 160 TANMIAGHLLLTLLGT------FISKFLILLPFTILIqnMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00179  162 TANITAGHLLMHLISSavfvlmNFMGMVALLTLLVLF--LLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-216 1.52e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 122.83  E-value: 1.52e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   1 MMNLFESFDPTTSMNFSF---NWLSLMLIFIIIPMNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIF 77
Cdd:MTH00176    2 LVDLFSSFDPPNKNIFSMislSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFIL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  78 IALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAI 157
Cdd:MTH00176   82 VMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAV 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2294228348 158 RLTANMIAGHLLLTLLGTFISKFL----ILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00176  162 RLAANLSAGHLLLGLLGAAMWGLLpvspLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLY 224
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-220 5.03e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 116.12  E-value: 5.03e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   1 MMNLFESFDPTTSMNFSFN---WLSLMLIFIIIPMNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIF 77
Cdd:MTH00173    2 MVDLFSSFDDHNSSFSSLSflmWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  78 IALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAI 157
Cdd:MTH00173   82 LISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTV 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2294228348 158 RLTANMIAGHLLLTLLGTFISKFLILLPFTI-----LIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00173  162 RLLANISAGHIVLTLIGNYLSSSLFSSSVVSlllvlLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 69-220 3.63e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 113.81  E-value: 3.63e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  69 LIFFSLMIFIALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISN 148
Cdd:MTH00132   71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2294228348 149 IIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLP----FTILIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPtvaiLTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-219 1.02e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 107.36  E-value: 1.02e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   1 MMNLFESFDPTTSMNFSFNWLSLMLIFIIIPM--NFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNiLIFFSLMIFI 78
Cdd:MTH00073    2 NLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTptNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWA-LILTSLMVFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  79 ALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIR 158
Cdd:MTH00073   81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228348 159 LTANMIAGHLLLTLLGTFISKFLILLP----FTILIQNMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00073  161 LTANLTAGHLLIQLISTATLVLLPLMPtvsiLTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-216 1.28e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 107.51  E-value: 1.28e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   1 MMNLFESFDPTTSMNFSFN-----WLSLMLIFIIIPMNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLM 75
Cdd:MTH00005    2 LTDIFSSFDPATNSLFNNLsstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  76 IFIALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTL 155
Cdd:MTH00005   82 TMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228348 156 AIRLTANMIAGHLLLTLLGTFISKFLILLPFT----ILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00005  162 SFRLAANMSAGHIVLSLIGIYAASALFSSISStillILTQMGYILFEVGICLIQAYIFCLLLSLY 226
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-219 3.81e-28

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 106.21  E-value: 3.81e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348   3 NLFESFDPTTSMNFSFNWLSLML----IFIIIPMNFwiIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFI 78
Cdd:MTH00035    6 SIFGQFSPDTILFIPLTLLSSVIalswLFFINPTNW--LPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  79 ALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIR 158
Cdd:MTH00035   84 LSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLR 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228348 159 LTANMIAGHLLLTLLGT----FISKFLILLPfTILIQNMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00035  164 LAANLTAGHLLIFLLSTaiweLSNSPLISII-TLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 23-217 8.08e-25

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 96.68  E-value: 8.08e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  23 LMLIFIIIPMNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIALNNFMGLFPYIFTPTSHMSFNLI 102
Cdd:COG0356    13 LLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348 103 IALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISkFLI 182
Cdd:COG0356    93 LALIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAP-FLL 171

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 2294228348 183 LLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:COG0356   172 LGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
ATP-synt_A pfam00119
ATP synthase A chain;
20-217 7.14e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 94.48  E-value: 7.14e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  20 WLSLMLIFIIIPMNFW----IIPSRL----EILIMYISQIIFyefKSITKKKYKMNILIFFSLMIFIALNNFMGLF---P 88
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLqnfvEMLVEFVDNIVK---DNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  89 YIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMK-MLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLTANMIAGH 167
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHGLGgYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2294228348 168 LLLTLLGTFISKFL----ILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:pfam00119 162 LLLLLLAGLIFALLsagfLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYI 215
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 16-217 6.91e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 87.37  E-value: 6.91e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  16 FSFNWLSLMLIFIIIPM-----NFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIALNNFMGLFPYI 90
Cdd:MTH00175   26 VTFTNSSMMMVLAVIIFwlllkGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGLFPYV 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  91 FTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLL 170
Cdd:MTH00175  106 FTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLF 185

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2294228348 171 TLLGTF-----ISKFLILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:MTH00175  186 AILSGFafnmlSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYL 237
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 21-216 2.38e-20

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 85.62  E-value: 2.38e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  21 LSLMLIFIIIPMNFWIIPSRL----EILIMYISQIIfyefKSITKKKYKMNILIFFSLMIFIALNNFMGLFP-YIFTPTS 95
Cdd:PRK05815   26 LILLLFALVATRKLSGVPGGLqnfvEMIVEFVRGQV----KDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTA 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  96 HMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNtPMPLMNFmvmIELISNIIRPFTLAIRLTANMIAGHLLLTLLGT 175
Cdd:PRK05815  102 DINVTLALALIVFVLVIYYGIKKKGLGGYLKEFYLQ-PHPLLLP---IEIISEFSRPISLSLRLFGNMLAGELILALIAL 177

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 2294228348 176 FISKFLILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK05815  178 LGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 36-216 2.55e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 85.48  E-value: 2.55e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  36 IIPSRLEILImyisQIIFYEFKSITKKKYKMNILIFF----SLMIFIALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSF 111
Cdd:MTH00172   40 LIPKRWQSII----EIIYNHFHGVVKDNLGNEGLKYFpfiiSLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGV 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348 112 FIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLI----LLPFT 187
Cdd:MTH00172  116 TLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLCasgfLSLFP 195

                         170       180
                  ....*....|....*....|....*....
gi 2294228348 188 ILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00172  196 LLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 77-216 4.40e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 67.08  E-value: 4.40e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  77 FIALNNFMGLFPYIFTPTSHMSFNLIIALsswMSFFIYSWWN-KPMKM---LIHLVPlNTPMPLMNFMVMIELISNIIRP 152
Cdd:PRK13419  180 FILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAiKAHGIkgyLAHLTG-GTHWSLWIIMIPIEFIGLFTKP 255

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228348 153 FTLAIRLTANMIAGHL-------LLTLLGTFISKFLILLPFTILIqnmlMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13419  256 FALTVRLFANMTAGHIvilslifISFILKSYIVAVAVSVPFAIFI----YLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 36-220 1.61e-11

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 61.88  E-value: 1.61e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  36 IIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYS 115
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAG 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348 116 WWNKPMKMLIHLVPLNTPMPLMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFL-------ILLPFTI 188
Cdd:MTH00174  139 LITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMIntgiligSFVPFAI 218

                         170       180       190
                  ....*....|....*....|....*....|..
gi 2294228348 189 LIqnMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00174  219 LI--FVTILEMAVAIIQAYVFTLLTIVYLRDT 248
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 62-219 1.40e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 55.75  E-value: 1.40e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  62 KKYKMNILIFFSLMIFIALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKpmKMLIHLVPLNTPMPLMNF-M 140
Cdd:MTH00087   46 NKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSKGSDSFLKTFsM 123

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2294228348 141 VMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLPFTILiqnmlmiLEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00087  124 LFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSILAIM-------MECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 92-216 4.48e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 55.28  E-value: 4.48e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  92 TPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIELI-SNIIRPFTLAIRLTANMIAGHLLL 170
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2294228348 171 TLLGTFISKF--LILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13417  297 LALMGFIFQFqsWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 21-216 2.58e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 49.74  E-value: 2.58e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  21 LSLMLIFIIIPMNFWIIPSRLEILIMYISQIIFYEFKSITKKKYKMNILIFFSLMIFIALNNFMGLFPYIFTPTSHMSFN 100
Cdd:PRK13420   28 IVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSPTADLSVT 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348 101 LIIALsswMSFFIYSWWN-KPMKMLIHLVPLNTPMPlmnFMVMIELISNIIRPFTLAIRLTANMIAGHllltllgtfISK 179
Cdd:PRK13420  108 AALAL---LVFFSVHWFGiRAEGLREYLKHYLSPSP---FLLPFHLISEITRTLALAVRLFGNIMSLE---------LAA 172

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 2294228348 180 FLILLPFTILIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13420  173 LLVLLVAGFLVPVPILMLHIIEALVQAYIFGMLALIY 209
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 73-216 8.25e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 42.38  E-value: 8.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  73 SLMIFIALNNFMGLFPYIFTPTSHMSFNLIIALSSWMSFFIYSWwnKPMKMLIHLVPLNTPMPLMnfmVMIELISNIIRP 152
Cdd:PRK13421   83 TLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGV--RARGVRGYLATFAEPTWVM---IPLNLVEQLTRT 157

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2294228348 153 FTLAIRLTANMIAGhllLTLLGTFISKFLILLPFTiliqnmLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13421  158 FSLIVRLFGNVMSG---VFVIGIVLSLAGLLVPIP------LMALDLLTGAVQAYIFAVLAMVF 212
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 66-166 3.91e-04

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 39.87  E-value: 3.91e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228348  66 MNILIFFSLMIFIALNNFMGL-FPYIFTPTSHMSFNLIIALSSWMSFFIYSWWNKPMKMLIHLVPLNTPMPLMNFMVMIE 144
Cdd:MTH00050   20 GSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAE 99

                          90       100
                  ....*....|....*....|..
gi 2294228348 145 LISNIIRPFTLAIRLTANMIAG 166
Cdd:MTH00050  100 TISYIIRPVVLILRPFINISLG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH