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Conserved domains on  [gi|2294228352|gb|UVY96470|]
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ATP synthase F0 subunit 6, partial (mitochondrion) [Osmia taurus]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 7.95e-72

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 217.73  E-value: 7.95e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   1 MMNLFEIFDPTTSSFFSLNWISPLLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  81 SNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228352 161 ANMIAGHLLLTLLGTFISKF-LILLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 7.95e-72

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 217.73  E-value: 7.95e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   1 MMNLFEIFDPTTSSFFSLNWISPLLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  81 SNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228352 161 ANMIAGHLLLTLLGTFISKF-LILLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-216 6.55e-36

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 126.17  E-value: 6.55e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   4 LFEIFDPTTSSFFSLN------WISPLLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIF 77
Cdd:TIGR01131   1 LFSQFDISPITLFSLTllslilLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  78 IALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAI 157
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228352 158 RLTANMIAGHLLLTLLGTFISKFLI--LLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSsaIFALLLLILVALIILEIFVAFIQAYVFTLLTCLY 221
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 64-217 1.32e-34

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 120.58  E-value: 1.32e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  64 YKMNILIFFSLMIFIALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMI 143
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228352 144 ELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFL-ILLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLsSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 24-217 9.37e-24

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 93.98  E-value: 9.37e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  24 LLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIALSNFMGLFPYIFTSTSHISFNLII 103
Cdd:COG0356    14 LLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLAL 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352 104 ALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISkFLIL 183
Cdd:COG0356    94 ALIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAP-FLLL 172

                         170       180       190
                  ....*....|....*....|....*....|....
gi 2294228352 184 LPFTIIIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:COG0356   173 GVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
ATP-synt_A pfam00119
ATP synthase A chain;
58-217 1.48e-23

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 93.71  E-value: 1.48e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  58 NLTKKKYKMNILIFFSLMIFIALSNFMGLF---PYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLM-MLIHLVPLNTP 133
Cdd:pfam00119  48 NIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGgYFKKLFVPPVP 127

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352 134 PALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFL----ILLPFTIIIQNMLMILEIAVSMIQAYVF 209
Cdd:pfam00119 128 LPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLsagfLLGVIPPLLGVAWTLFELLVAFIQAYVF 207


                  ....*...
gi 2294228352 210 SILSLLYF 217
Cdd:pfam00119 208 TMLTAVYI 215
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 7.95e-72

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 217.73  E-value: 7.95e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   1 MMNLFEIFDPTTSSFFSLNWISPLLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  81 SNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228352 161 ANMIAGHLLLTLLGTFISKF-LILLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-216 6.55e-36

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 126.17  E-value: 6.55e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   4 LFEIFDPTTSSFFSLN------WISPLLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIF 77
Cdd:TIGR01131   1 LFSQFDISPITLFSLTllslilLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  78 IALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAI 157
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228352 158 RLTANMIAGHLLLTLLGTFISKFLI--LLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSsaIFALLLLILVALIILEIFVAFIQAYVFTLLTCLY 221
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-216 9.92e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 123.22  E-value: 9.92e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   1 MMNLFEIFDPTTSSFFS---LNWISPLLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIF 77
Cdd:MTH00176    2 LVDLFSSFDPPNKNIFSmisLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFIL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  78 IALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAI 157
Cdd:MTH00176   82 VMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAV 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2294228352 158 RLTANMIAGHLLLTLLGTFISKFL----ILLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00176  162 RLAANLSAGHLLLGLLGAAMWGLLpvspLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLY 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 64-217 1.32e-34

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 120.58  E-value: 1.32e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  64 YKMNILIFFSLMIFIALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMI 143
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228352 144 ELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFL-ILLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLsSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-219 1.86e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 114.54  E-value: 1.86e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   1 MMNLFEIFDPTTSSFFSLNWISPLLIFIILPL-NFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIA 79
Cdd:MTH00120    2 NLNFFDQFSSPELLGIPLILLAMLIPALLIPSpKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  80 LSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRL 159
Cdd:MTH00120   82 LINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2294228352 160 TANMIAGHLLLTLLGT----FISKFLILLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00120  162 TANLTAGHLLIQLISTatlnLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-220 9.74e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 113.04  E-value: 9.74e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   1 MMNLFEIFDPTTSSFFSLN---WISPLLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIF 77
Cdd:MTH00173    2 MVDLFSSFDDHNSSFSSLSflmWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  78 IALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAI 157
Cdd:MTH00173   82 LISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTV 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2294228352 158 RLTANMIAGHLLLTLLGTFISKFLILLPFTI-----IIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00173  162 RLLANISAGHIVLTLIGNYLSSSLFSSSVVSlllvlLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 69-220 3.59e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 111.12  E-value: 3.59e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  69 LIFFSLMIFIALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISN 148
Cdd:MTH00132   71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2294228352 149 IIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLP----FTIIIQNMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPtvaiLTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-219 7.78e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 107.73  E-value: 7.78e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   1 MMNLFEIFDPTTSSFFSLNWISPLLIFIILP-LNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIA 79
Cdd:MTH00179    2 MLSMFDQFESPSLLGIPLLALALLLPWLLFPsLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  80 LSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRL 159
Cdd:MTH00179   82 TLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2294228352 160 TANMIAGHLLLTLLGTFISKFLILLP----FTIIIQNMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00179  162 TANITAGHLLMHLISSAVFVLMNFMGmvalLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 69-216 5.35e-28

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 105.42  E-value: 5.35e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  69 LIFFSLMIFIALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISN 148
Cdd:MTH00101   70 LMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISL 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2294228352 149 IIRPFTLAIRLTANMIAGHLLLTLLG------TFISKFLILLPFTIIIqnMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00101  150 FIQPMALAVRLTANITAGHLLIHLIGgatlalMSISTTTALITFIILI--LLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-216 6.07e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 105.59  E-value: 6.07e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   1 MMNLFEIFDPTTSSFF-----SLNWISPLLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLM 75
Cdd:MTH00005    2 LTDIFSSFDPATNSLFnnlssTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  76 IFIALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTL 155
Cdd:MTH00005   82 TMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228352 156 AIRLTANMIAGHLLLTLLGTFISKFLILLPFT----IIIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00005  162 SFRLAANMSAGHIVLSLIGIYAASALFSSISStillILTQMGYILFEVGICLIQAYIFCLLLSLY 226
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-219 1.44e-27

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 104.67  E-value: 1.44e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352   3 NLFEIFDPTTSSFFSLNWISPLL----IFIILPLNFwiIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFI 78
Cdd:MTH00035    6 SIFGQFSPDTILFIPLTLLSSVIalswLFFINPTNW--LPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  79 ALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIR 158
Cdd:MTH00035   84 LSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLR 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228352 159 LTANMIAGHLLLTLLGT----FISKFLILLPfTIIIQNMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00035  164 LAANLTAGHLLIFLLSTaiweLSNSPLISII-TLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 69-219 4.15e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 103.12  E-value: 4.15e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  69 LIFFSLMIFIALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISN 148
Cdd:MTH00073   71 LILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228352 149 IIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLP----FTIIIQNMLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00073  151 FIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMPtvsiLTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 24-217 9.37e-24

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 93.98  E-value: 9.37e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  24 LLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIALSNFMGLFPYIFTSTSHISFNLII 103
Cdd:COG0356    14 LLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLAL 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352 104 ALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISkFLIL 183
Cdd:COG0356    94 ALIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAP-FLLL 172

                         170       180       190
                  ....*....|....*....|....*....|....
gi 2294228352 184 LPFTIIIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:COG0356   173 GVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
ATP-synt_A pfam00119
ATP synthase A chain;
58-217 1.48e-23

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 93.71  E-value: 1.48e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  58 NLTKKKYKMNILIFFSLMIFIALSNFMGLF---PYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLM-MLIHLVPLNTP 133
Cdd:pfam00119  48 NIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGgYFKKLFVPPVP 127

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352 134 PALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFL----ILLPFTIIIQNMLMILEIAVSMIQAYVF 209
Cdd:pfam00119 128 LPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLsagfLLGVIPPLLGVAWTLFELLVAFIQAYVF 207


                  ....*...
gi 2294228352 210 SILSLLYF 217
Cdd:pfam00119 208 TMLTAVYI 215
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 24-216 4.39e-20

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 84.85  E-value: 4.39e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  24 LLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIALSNFMGLFP-YIFTSTSHISFNLI 102
Cdd:PRK05815   29 LLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINVTLA 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352 103 IALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPalmnFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLI 182
Cdd:PRK05815  109 LALIVFVLVIYYGIKKKGLGGYLKEFYLQPHP----LLLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLL 184

                         170       180       190
                  ....*....|....*....|....*....|....
gi 2294228352 183 LLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK05815  185 LALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 16-217 5.30e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 79.67  E-value: 5.30e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  16 FSLNWISPLLIFIILPLNFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIALSNFMGLFPYIFTSTS 95
Cdd:MTH00175   31 SSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTA 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  96 HISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGT 175
Cdd:MTH00175  111 HIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSG 190

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2294228352 176 F-----ISKFLILLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:MTH00175  191 FafnmlSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYL 237
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 24-216 5.48e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 79.31  E-value: 5.48e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  24 LLIFIILPLNFW-IIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIALSNFMGLFPYIFTSTSHISFNLI 102
Cdd:MTH00172   27 VIIVVLLLFKGIkLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLG 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352 103 IALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLI 182
Cdd:MTH00172  107 LSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLC 186

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 2294228352 183 ----LLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00172  187 asgfLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 77-216 4.68e-15

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 72.85  E-value: 4.68e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  77 FIALSNFMGLFPYIFTSTSHISFNLIIALsswLSFFIYSWWNKPLM----MLIHLVPlNTPPALMNFMVMIELISNIIRP 152
Cdd:PRK13419  180 FILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLTG-GTHWSLWIIMIPIEFIGLFTKP 255

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228352 153 FTLAIRLTANMIAGHL-------LLTLLGTFISKFLILLPFTIIIqnmlMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13419  256 FALTVRLFANMTAGHIvilslifISFILKSYIVAVAVSVPFAIFI----YLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 72-220 1.70e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 56.10  E-value: 1.70e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  72 FSLMIFIALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELISNIIR 151
Cdd:MTH00174   95 LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISR 174

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2294228352 152 PFTLAIRLTANMIAGHLLLTLLGTFISKFL-------ILLPFTIIIqnMLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00174  175 AISLGVRLAANISSGHLLFSIIASFAWKMIntgiligSFVPFAILI--FVTILEMAVAIIQAYVFTLLTIVYLRDT 248
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 62-219 3.73e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 54.21  E-value: 3.73e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  62 KKYKMNILIFFSLMIFIALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKplMMLIHLVPLNTPPALMNF-M 140
Cdd:MTH00087   46 NKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSKGSDSFLKTFsM 123

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2294228352 141 VMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLPFTIiiqnmlmILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00087  124 LFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSILAI-------MMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 92-216 2.13e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 50.27  E-value: 2.13e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  92 TSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIELI-SNIIRPFTLAIRLTANMIAGHLLL 170
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2294228352 171 TLLGTFISKF--LILLPFTIIIQNMLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13417  297 LALMGFIFQFqsWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 33-216 2.95e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 40.50  E-value: 2.95e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  33 NFWIIPSRFEMLIISISKIIFSEFKNLTKKKYKMNILIFFSLMIFIALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFF 112
Cdd:PRK13420   40 RLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVH 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352 113 IYSWWNKPLMMLIHLVPLNTPpalmnFMVMIELISNIIRPFTLAIRLTANMIAGHllltllgtfISKFLILLPFTIIIQN 192
Cdd:PRK13420  120 WFGIRAEGLREYLKHYLSPSP-----FLLPFHLISEITRTLALAVRLFGNIMSLE---------LAALLVLLVAGFLVPV 185

                         170       180
                  ....*....|....*....|....
gi 2294228352 193 MLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13420  186 PILMLHIIEALVQAYIFGMLALIY 209
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 73-216 2.20e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 38.14  E-value: 2.20e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  73 SLMIFIALSNFMGLFPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLmmLIHLVPLNTPPALMnfmVMIELISNIIRP 152
Cdd:PRK13421   83 TLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGVRARGV--RGYLATFAEPTWVM---IPLNLVEQLTRT 157

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2294228352 153 FTLAIRLTANMIAGhllLTLLGTFISKFLILLPFTiiiqnmLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13421  158 FSLIVRLFGNVMSG---VFVIGIVLSLAGLLVPIP------LMALDLLTGAVQAYIFAVLAMVF 212
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 66-166 8.61e-03

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 35.63  E-value: 8.61e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228352  66 MNILIFFSLMIFIALSNFMGL-FPYIFTSTSHISFNLIIALSSWLSFFIYSWWNKPLMMLIHLVPLNTPPALMNFMVMIE 144
Cdd:MTH00050   20 GSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAE 99

                          90       100
                  ....*....|....*....|..
gi 2294228352 145 LISNIIRPFTLAIRLTANMIAG 166
Cdd:MTH00050  100 TISYIIRPVVLILRPFINISLG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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