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Conserved domains on  [gi|2294228362|gb|UVY96475|]
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ATP synthase F0 subunit 6, partial (mitochondrion) [Osmia lignaria]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 5.43e-72

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 218.11  E-value: 5.43e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   1 MMNLFEIFDPTTSMHFSLNWINSMLIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  81 SNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228362 161 ANMIAGHLLLTLLGTFISKFLILLPITI-LIQNLLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLSSMILSILiLIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 5.43e-72

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 218.11  E-value: 5.43e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   1 MMNLFEIFDPTTSMHFSLNWINSMLIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  81 SNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228362 161 ANMIAGHLLLTLLGTFISKFLILLPITI-LIQNLLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLSSMILSILiLIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-216 9.33e-36

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 125.78  E-value: 9.33e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   4 LFEIFDPT--TSMHFSLNWI----NSMLIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTF 77
Cdd:TIGR01131   1 LFSQFDISpiTLFSLTLLSLilllSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  78 IALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAI 157
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228362 158 RLTANMIAGHLLLTLLGTFISKFLILLPITILI--QNLLMILEIAVSMIQAYVFSILSLLY 216
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIFALLLliLVALIILEIFVAFIQAYVFTLLTCLY 221
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 64-217 6.50e-34

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 118.66  E-value: 6.50e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  64 YKMNILIFFSLMTFIALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMI 143
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228362 144 ELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLPITILI-QNLLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLlPVALTLLELFVAFIQAYVFTLLTAVYI 155
ATP-synt_A pfam00119
ATP synthase A chain;
20-217 1.26e-23

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 93.71  E-value: 1.26e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  20 WINSMLIFIILPLNFW----IIPSRF----EMLFISISKIIFSefkSLTKKKYKMNILIFFSLMTFIALSNFMGLF---P 88
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLqnfvEMLVEFVDNIVKD---NIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  89 YIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPL-NMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGH 167
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHGLgGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2294228362 168 LLLTLLGTFISKFLILLPITILIQ----NLLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:pfam00119 162 LLLLLLAGLIFALLSAGFLLGVIPpllgVAWTLFELLVAFIQAYVFTMLTAVYI 215
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 25-217 9.92e-23

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 91.29  E-value: 9.92e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  25 LIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFIALSNFMGLFPYIFTSTSHMSFNLIIA 104
Cdd:COG0356    15 LLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALA 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362 105 LSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISkFLILL 184
Cdd:COG0356    95 LIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAP-FLLLG 173

                         170       180       190
                  ....*....|....*....|....*....|...
gi 2294228362 185 PITILIQNLLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:COG0356   174 VLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-220 5.43e-72

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 218.11  E-value: 5.43e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   1 MMNLFEIFDPTTSMHFSLNWINSMLIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFIAL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  81 SNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLT 160
Cdd:MTH00157   82 NNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLA 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228362 161 ANMIAGHLLLTLLGTFISKFLILLPITI-LIQNLLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00157  162 ANMIAGHLLLTLLGNTGPSLSSMILSILiLIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-216 7.50e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 125.92  E-value: 7.50e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   1 MMNLFEIFDPTTSMHFS---LNWINSMLIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTF 77
Cdd:MTH00176    2 LVDLFSSFDPPNKNIFSmisLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFIL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  78 IALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAI 157
Cdd:MTH00176   82 VMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAV 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2294228362 158 RLTANMIAGHLLLTLLGTFISKFL----ILLPITILIQNLLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00176  162 RLAANLSAGHLLLGLLGAAMWGLLpvspLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLY 224
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-216 9.33e-36

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 125.78  E-value: 9.33e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   4 LFEIFDPT--TSMHFSLNWI----NSMLIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTF 77
Cdd:TIGR01131   1 LFSQFDISpiTLFSLTLLSLilllSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  78 IALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAI 157
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2294228362 158 RLTANMIAGHLLLTLLGTFISKFLILLPITILI--QNLLMILEIAVSMIQAYVFSILSLLY 216
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIFALLLliLVALIILEIFVAFIQAYVFTLLTCLY 221
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 64-217 6.50e-34

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 118.66  E-value: 6.50e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  64 YKMNILIFFSLMTFIALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMI 143
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228362 144 ELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLPITILI-QNLLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLlPVALTLLELFVAFIQAYVFTLLTAVYI 155
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-219 8.09e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 113.00  E-value: 8.09e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   1 MMNLFEIFDPTTSMHFSLNWInSMLI--FIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFI 78
Cdd:MTH00120    2 NLNFFDQFSSPELLGIPLILL-AMLIpaLLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  79 ALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIR 158
Cdd:MTH00120   81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228362 159 LTANMIAGHLLLTLLGT----FISKFLILLPITILIQNLLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00120  161 LTANLTAGHLLIQLISTatlnLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-219 3.60e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 111.19  E-value: 3.60e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   1 MMNLFEIFDPTTSMHFSLNWINSMLIFIILP-LNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFIA 79
Cdd:MTH00179    2 MLSMFDQFESPSLLGIPLLALALLLPWLLFPsLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  80 LSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRL 159
Cdd:MTH00179   82 TLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2294228362 160 TANMIAGHLLLTLLGT----FISKFLILLPITILIQNLLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00179  162 TANITAGHLLMHLISSavfvLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 3-216 5.81e-29

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 108.12  E-value: 5.81e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   3 NLFEIFDPTTSMHFSLNWINSMLIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFIALSN 82
Cdd:MTH00101    4 NLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTN 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  83 FMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTAN 162
Cdd:MTH00101   84 LLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTAN 163

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2294228362 163 MIAGHLLLTLLG----TFISKFLILLPITILIQNLLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00101  164 ITAGHLLIHLIGgatlALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-220 6.44e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 108.03  E-value: 6.44e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   1 MMNLFEIFDPTTSMHFSLN---WINSMLIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTF 77
Cdd:MTH00173    2 MVDLFSSFDDHNSSFSSLSflmWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  78 IALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAI 157
Cdd:MTH00173   82 LISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTV 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2294228362 158 RLTANMIAGHLLLTLLGTFISKFLILLPITILIQNLLM-----ILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00173  162 RLLANISAGHIVLTLIGNYLSSSLFSSSVVSLLLVLLIqvgyfIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-219 1.77e-27

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 104.28  E-value: 1.77e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   3 NLFEIFDPTTSMHFSLNWINSML----IFIILPLNFwiIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFI 78
Cdd:MTH00035    6 SIFGQFSPDTILFIPLTLLSSVIalswLFFINPTNW--LPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  79 ALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIR 158
Cdd:MTH00035   84 LSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLR 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2294228362 159 LTANMIAGHLLLTLLGTFI---SKFLILLPITILIQNLLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00035  164 LAANLTAGHLLIFLLSTAIwelSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 69-220 6.28e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 102.64  E-value: 6.28e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  69 LIFFSLMTFIALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISN 148
Cdd:MTH00132   71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2294228362 149 IIRPFTLAIRLTANMIAGHLLLTLLGT----FISKFLILLPITILIQNLLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATaafvLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-216 1.57e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 101.73  E-value: 1.57e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362   1 MMNLFEIFDPTTSMHF-----SLNWINSMLIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLM 75
Cdd:MTH00005    2 LTDIFSSFDPATNSLFnnlssTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  76 TFIALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTL 155
Cdd:MTH00005   82 TMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228362 156 AIRLTANMIAGHLLLTLLGTFISKF----LILLPITILIQNLLMILEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00005  162 SFRLAANMSAGHIVLSLIGIYAASAlfssISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLY 226
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 69-219 2.05e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 96.19  E-value: 2.05e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  69 LIFFSLMTFIALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISN 148
Cdd:MTH00073   71 LILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2294228362 149 IIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLPITILIQN----LLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00073  151 FIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMivlfLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
20-217 1.26e-23

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 93.71  E-value: 1.26e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  20 WINSMLIFIILPLNFW----IIPSRF----EMLFISISKIIFSefkSLTKKKYKMNILIFFSLMTFIALSNFMGLF---P 88
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLqnfvEMLVEFVDNIVKD---NIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  89 YIFTSTSHMSFNLIIALSSWMSFFIYSWWNKPL-NMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGH 167
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHGLgGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2294228362 168 LLLTLLGTFISKFLILLPITILIQ----NLLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:pfam00119 162 LLLLLLAGLIFALLSAGFLLGVIPpllgVAWTLFELLVAFIQAYVFTMLTAVYI 215
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 25-217 9.92e-23

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 91.29  E-value: 9.92e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  25 LIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFIALSNFMGLFPYIFTSTSHMSFNLIIA 104
Cdd:COG0356    15 LLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALA 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362 105 LSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISkFLILL 184
Cdd:COG0356    95 LIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAP-FLLLG 173

                         170       180       190
                  ....*....|....*....|....*....|...
gi 2294228362 185 PITILIQNLLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:COG0356   174 VLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 17-216 1.12e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 83.94  E-value: 1.12e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  17 SLNWINSMLIFIILPLNFWIIPSRFEmlfiSISKIIFSEFKSLTKKKYKMNILIFF----SLMTFIALSNFMGLFPYIFT 92
Cdd:MTH00172   21 SIMMILVIIVVLLLFKGIKLIPKRWQ----SIIEIIYNHFHGVVKDNLGNEGLKYFpfiiSLFFFIVFLNLLGLFPYVFT 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  93 STSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTL 172
Cdd:MTH00172   97 PTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAI 176

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 2294228362 173 LGTFISKFLILLPITILIQNLLMI----LEIAVSMIQAYVFSILSLLY 216
Cdd:MTH00172  177 LAGFGFNMLCASGFLSLFPLLIMVfitlLEIAVAVIQAYVFCLLTTIY 224
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 36-216 5.91e-18

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 79.07  E-value: 5.91e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  36 IIPSRF----EMLFISISKIIfsefKSLTKKKYKMNILIFFSLMTFIALSNFMGLFP-YIFTSTSHMSFNLIIALSSWMS 110
Cdd:PRK05815   41 GVPGGLqnfvEMIVEFVRGQV----KDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVL 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362 111 FFIYSWWNKPLNMLIHLVPLNTPPalmnFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLPITILI 190
Cdd:PRK05815  117 VIYYGIKKKGLGGYLKEFYLQPHP----LLLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLIL 192

                         170       180
                  ....*....|....*....|....*.
gi 2294228362 191 QNLLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK05815  193 PVAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 16-217 3.19e-17

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 77.35  E-value: 3.19e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  16 FSLNWINSMLIFIILPLNFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFIALSNFMGLFPYIFTSTS 95
Cdd:MTH00175   31 SSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTA 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  96 HMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGT 175
Cdd:MTH00175  111 HIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSG 190

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2294228362 176 F-----ISKFLILLPITILIQNLLMILEIAVSMIQAYVFSILSLLYF 217
Cdd:MTH00175  191 FafnmlSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYL 237
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 77-216 2.93e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 61.68  E-value: 2.93e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  77 FIALSNFMGLFPYIFTSTSHMSFNLIIALsswMSFFIYSWWN-KPLNM---LIHLVPlNTPPALMNFMVMIELISNIIRP 152
Cdd:PRK13419  180 FILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAiKAHGIkgyLAHLTG-GTHWSLWIIMIPIEFIGLFTKP 255

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2294228362 153 FTLAIRLTANMIAGHLLLTLLgTFISkFLILLPITILIQNLLM-----ILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13419  256 FALTVRLFANMTAGHIVILSL-IFIS-FILKSYIVAVAVSVPFaifiyLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 33-220 6.99e-10

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 57.26  E-value: 6.99e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  33 NFWIIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFIALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFF 112
Cdd:MTH00174   56 NNTLVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTT 135

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362 113 IYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLPIT----- 187
Cdd:MTH00174  136 LAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIgsfvp 215

                         170       180       190
                  ....*....|....*....|....*....|...
gi 2294228362 188 ILIQNLLMILEIAVSMIQAYVFSILSLLYFLES 220
Cdd:MTH00174  216 FAILIFVTILEMAVAIIQAYVFTLLTIVYLRDT 248
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 62-219 8.00e-08

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 50.75  E-value: 8.00e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  62 KKYKMNILIFFSLMTFIALSNFMGLFPYIFTSTSHMSFNLIIALSSWMSFFIYSWWNKplNMLIHLVPLNTPPALMNF-M 140
Cdd:MTH00087   46 NKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSKGSDSFLKTFsM 123

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2294228362 141 VMIELISNIIRPFTLAIRLTANMIAGHLLLTLLGTFISKFLILLPitiliqnLLMILEIAVSMIQAYVFSILSLLYFLE 219
Cdd:MTH00087  124 LFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSI-------LAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 92-216 1.92e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 44.50  E-value: 1.92e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  92 TSTSHMSFNLIIALSSWMSFFIYSWWNKPLNMLIHLVPLNTPPALMNFMVMIELI-SNIIRPFTLAIRLTANMIAGHLLL 170
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2294228362 171 TLLGTFISKFL--ILLPITILIQNLLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13417  297 LALMGFIFQFQswGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 36-166 2.45e-03

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 37.56  E-value: 2.45e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  36 IIPSRFEMLFISISKIIFsefksltkkkyKMNILIFFSLMTFIALSNFMGL-FPYIFTSTSHMSFNLIIALSSWMSFFIY 114
Cdd:MTH00050    1 MFVNDFSSLFSLIYKLIL-----------GGSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLS 69

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2294228362 115 SWWNKPLNMLIHLVPLNTPPALMNFMVMIELISNIIRPFTLAIRLTANMIAG 166
Cdd:MTH00050   70 RVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 21-216 5.24e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 37.03  E-value: 5.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  21 INSMLIFIILPLNFW-------IIPSRFEMLFISISKIIFSEFKSLTKKKYKMNILIFFSLMTFIALSNFMGLFPYIFTS 93
Cdd:PRK13420   21 LTTWGIMIVLVLASWlttrrlsLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSP 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294228362  94 TSHMSFNLIIALsswMSFFIYSWW----NKPLNMLIHLvpLNTPPALMNFmvmiELISNIIRPFTLAIRLTANMIA---G 166
Cdd:PRK13420  101 TADLSVTAALAL---LVFFSVHWFgiraEGLREYLKHY--LSPSPFLLPF----HLISEITRTLALAVRLFGNIMSlelA 171

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 2294228362 167 HLLLTLLGTFISKFLillpitiliqnlLMILEIAVSMIQAYVFSILSLLY 216
Cdd:PRK13420  172 ALLVLLVAGFLVPVP------------ILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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