|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-273 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 570.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00131 15 NDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICI 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00131 95 YLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNAT 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00131 175 LTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPD 254
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00131 255 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 287
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-273 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 529.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00119 16 NNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00119 96 YLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00119 176 LTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPE 255
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00119 256 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 288
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-273 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 512.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00191 12 NGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICI 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00191 92 YLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNAT 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00191 172 LTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPE 251
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00191 252 NFIPANPLVTPVHIKPEWYFLFAYAILRSIPNK 284
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-273 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 512.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00156 5 NNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00156 85 YLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNAT 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00156 165 LTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPE 244
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00156 245 NFIPANPLVTPVHIQPEWYFLFAYAILRSIPNK 277
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-273 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 511.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00074 16 NNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00074 96 YLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKAT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00074 176 LTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPD 255
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00074 256 NFTPANPLVTPPHIQPEWYFLFAYAILRSIPNK 288
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-273 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 507.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00100 15 NHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00100 95 FLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKAT 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00100 175 LTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPD 254
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00100 255 NYTPANPLNTPPHIKPEWYFLFAYAILRSIPNK 287
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-273 |
2.83e-173 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 482.87 E-value: 2.83e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00145 16 NGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00145 96 YLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNAT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00145 176 LKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPE 255
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00145 256 NFIPANPMVTPVHIQPEWYFLFAYAILRSIPNK 288
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-273 |
2.37e-165 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 463.02 E-value: 2.37e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00034 15 NSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00034 95 YFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNAT 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00034 175 LTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPE 254
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00034 255 NFIPANPLVTPPHIQPEWYFLFAYAILRSIPNK 287
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-273 |
1.14e-162 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 456.06 E-value: 1.14e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00016 16 NGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00016 96 YLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNAT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00016 176 LTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPE 255
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00016 256 NFIPANPLVTPTHIKPEWYFLWAYAILRSIPNK 288
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-273 |
1.03e-138 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 395.61 E-value: 1.03e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00022 14 NGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00022 94 YIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNAT 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00022 174 LNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPE 253
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00022 254 NFIQANSLVTPVHIQPEWYFLFAYAILRSIPNK 286
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-273 |
5.91e-138 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 393.52 E-value: 5.91e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00224 16 NGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00224 96 YLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNAT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00224 176 LNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPE 255
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00224 256 NFLMANPLVTPIHIKPEWYFLWMYAILRSIPNK 288
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-273 |
1.60e-132 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 379.82 E-value: 1.60e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00053 16 NSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCV 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00053 96 YFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNAT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00053 176 LNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAE 255
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00053 256 NFKQANPLVTPVHIKPEWYFLFAYAILRSIPNK 288
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
2-273 |
4.05e-107 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 315.34 E-value: 4.05e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 2 DALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICIY 81
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 82 MHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNATL 161
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 162 TRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFS--PNLLGDP 239
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDP 252
|
250 260 270
....*....|....*....|....*....|....
gi 2294364211 240 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNK 286
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-273 |
1.81e-104 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 307.64 E-value: 1.81e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:MTH00086 4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNAT 160
Cdd:MTH00086 84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 161 LTRFFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFaVLLLALTSLALFSPNLLGDPE 240
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPE 242
|
250 260 270
....*....|....*....|....*....|...
gi 2294364211 241 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00086 243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNK 275
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
8-272 |
2.35e-103 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 305.95 E-value: 2.35e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 8 PAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICIYMHTARG 87
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 88 LYYGSylYKE----TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNATLTR 163
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 164 FFAF-HFLFPFVIAATVVLHLLFLHETGSNNPAG----LNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNllGD 238
Cdd:COG1290 189 FFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270
....*....|....*....|....*....|....
gi 2294364211 239 PENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 272
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPG 300
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-192 |
1.76e-89 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 263.84 E-value: 1.76e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 1 NDALVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICI 80
Cdd:cd00284 7 NNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLML 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 81 YMHTARGLYYGSY--LYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDN 158
Cdd:cd00284 87 YLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDN 166
|
170 180 190
....*....|....*....|....*....|....
gi 2294364211 159 ATLTRFFAFHFLFPFVIAATVVLHLLFLHETGSN 192
Cdd:cd00284 167 ATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
4-190 |
4.86e-83 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 247.30 E-value: 4.86e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 4 LVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICIYMH 83
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 84 TARGLYYG--SYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNATL 161
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2294364211 162 TRFFAFHFLFPFVIAATVVLHLLFLHETG 190
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
4-273 |
7.97e-76 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 234.49 E-value: 7.97e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 4 LVDLPAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICIYMH 83
Cdd:MTH00046 9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 84 TARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNATLTR 163
Cdd:MTH00046 89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 164 FFAFHFLFPFVIAATVVLHLLFLHETGSNNPAGL-NSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPENF 242
Cdd:MTH00046 169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248
|
250 260 270
....*....|....*....|....*....|.
gi 2294364211 243 TPANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:MTH00046 249 LEADPLVTPVSIKPEWYFLAFYAMLRSINSK 279
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
74-239 |
4.00e-43 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 144.69 E-value: 4.00e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 74 SFFFICIYMHTARGLYYGSYLYKE--TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIW 151
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 152 GGFSVDNATLTRFFAF-HFLFPFVIAATVVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLAL 230
Cdd:pfam13631 81 GGPFPGTATIPRFYALhILLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2294364211 231 FSPNLLGDP 239
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
8-194 |
5.72e-34 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 122.51 E-value: 5.72e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 8 PAPSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICIYMHTARG 87
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 88 LYYGSYLYKE--TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNATLTRFF 165
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|
gi 2294364211 166 AFHFLFP-FVIAATVVLHLLFLHETGSNNP 194
Cdd:PRK03735 193 AIHVFFLpWALAVLMLAHFLMIRKQGISGP 222
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
193-273 |
1.52e-30 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 111.58 E-value: 1.52e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 193 NPAGLNSDADKISFHPYFSYKDILGFAVLLLALTSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 272
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
.
gi 2294364211 273 K 273
Cdd:cd00290 81 K 81
|
|
| petB |
CHL00070 |
cytochrome b6 |
10-194 |
6.51e-26 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 101.34 E-value: 6.51e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 10 PSNISVWWNFGSLLGLCLASQILTGLFLAMHYTSDISTAFSSVTHICRDVSYGWLIRNMHANGASFFFICIYMHTARGLY 89
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2294364211 90 YGSYLYKE--TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDALVQWIWGGFSVDNATLTRFFAF 167
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 2294364211 168 HFLFPFVIAATVVL-HLLFLHETGSNNP 194
Cdd:CHL00070 187 HTFVLPLLTAVFMLmHFLMIRKQGISGP 214
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
244-273 |
7.43e-16 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 71.36 E-value: 7.43e-16
10 20 30
....*....|....*....|....*....|
gi 2294364211 244 PANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSK 30
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
244-273 |
1.01e-06 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 47.48 E-value: 1.01e-06
10 20 30
....*....|....*....|....*....|
gi 2294364211 244 PANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNK 95
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
233-273 |
4.83e-06 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 45.38 E-value: 4.83e-06
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2294364211 233 PNLLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:CHL00058 59 PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNK 94
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
244-273 |
1.24e-05 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 44.40 E-value: 1.24e-05
10 20 30
....*....|....*....|....*....|
gi 2294364211 244 PANPLVTPPHIKPEWYFLFAYAILRSIPNK 273
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNK 94
|
|
|