|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-661 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1360.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 1 LLLFPTATKNLRRMWAFPNILLLSIVMIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGI 80
Cdd:CHL00025 26 LLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGI 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 81 FVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIG 160
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 161 DFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIH 240
Cdd:CHL00025 186 DFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIH 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 241 AATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFH 320
Cdd:CHL00025 266 AATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFH 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 321 LITHAYSKALLFLGSGSIIHSMEAVVGYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSW 400
Cdd:CHL00025 346 LITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSW 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 401 LYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIHFQKYSGKKSSSFYSIKLWGKEEQKMINRNfrlFPLLTMNKNE-- 478
Cdd:CHL00025 426 LYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEESKKINKL---LLLLTMNNNErv 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 479 -----KPYTIGGNVKK--RALISNFGYKKAFSYPHESDNTMLFPMLILVLFTLFVGAIAIPLNQEGMHLDILSKLLTPSI 551
Cdd:CHL00025 503 sffskKTYKIDGNVRNmiRSFITIFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSI 582
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 552 NLLHQNSNDFEDSYQFLTNATFSVSIACFGIFTAFLLYKPFYSPLQNLNLLNSFAKKGPKRIFLDKIIYLIYDWSYNRGY 631
Cdd:CHL00025 583 NLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFLDKIINVIYNWSYNRGY 662
|
650 660 670
....*....|....*....|....*....|
gi 2314329369 632 IDTFYSISLTKGIRGLAKLTHFFDRRVIDG 661
Cdd:CHL00025 663 IDAFYTISFIKGIRGLAELTHFFDRRVIDG 692
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-661 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 665.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 1 LLLFPTATKNLRRMWAFPNILLLSIVMIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGI 80
Cdd:PRK07376 26 LISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVAL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 81 FVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIG 160
Cdd:PRK07376 106 LVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 161 DFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIH 240
Cdd:PRK07376 186 DFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIH 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 241 AATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFH 320
Cdd:PRK07376 266 AATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFH 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 321 LITHAYSKALLFLGSGSIIHSMEAVVGYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSW 400
Cdd:PRK07376 346 LMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAF 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 401 LYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGhlnihfqKYSGkksssfysiklwgkEEQKMINRnfrlfpLLTMNKNEKP 480
Cdd:PRK07376 426 EANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRG--------------NDKELQKE------LLAAADAPGH 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 481 YTIGGNVKKRALISNfgykkafSYPHESDNTMLFPMLILVLFTLFVGAIAIPLNQEGMHLdilskLLTPSINLLHQNSND 560
Cdd:PRK07376 479 HEGHHEEHGEHHHHS-------GSPHESPWTMTLPLVVLAVPSVLIGLLGTPWNNRFEAF-----LHAPGEALEAAAHFE 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 561 FEdsyQFLTNATFSVSIACFGIFTAFLLYkpfyspLQNLNLLNSFAKKGPKrifldkiiylIYDWSYNRGYIDTFYSISL 640
Cdd:PRK07376 547 WG---EFLILAGASVGIALIGITLASLMY------LLKKIDPAAIAERFPP----------LYQFSLNKWYLDDIYEKLF 607
|
650 660
....*....|....*....|.
gi 2314329369 641 TKGIRGLAKLTHFFDRRVIDG 661
Cdd:PRK07376 608 VKGSRRLARQVLEVDYKVVDG 628
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
2-661 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 542.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 2 LLFPTATKNLRRMWAF-PNILLLSIVMIFSVDLSIQQINGSsIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGI 80
Cdd:COG1009 16 LLAGLLGRRLGRRAAGwLAALAPLAAFVLSLLLFPAVLGGE-VVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 81 FVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIG 160
Cdd:COG1009 95 LVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVG 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 161 DFGLLLGILGFYWITGSFEFQDLFEIFNNLIynnevHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIH 240
Cdd:COG1009 175 DLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLH 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 241 AATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFH 320
Cdd:COG1009 250 AATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFH 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 321 LITHAYSKALLFLGSGSIIHSMEavvgyspekSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSW 400
Cdd:COG1009 330 LLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAAL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 401 ---LYSPIFAIIAWSTAGLTAFYMFRIYLLTFeghlnihfqkysgkksssfysiklWGKEEQKMINRnfrlfplltmnkn 477
Cdd:COG1009 401 eagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FGKPRPKTPKH------------- 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 478 ekpytiggnvkkralisnfgykkafsyPHESDNTMLFPMLILVLFTLFVGAIAIPLNQegmHLDILSKLLTPSINLLHQn 557
Cdd:COG1009 444 ---------------------------PHESPWLMTLPLVVLAVLSLVLGLLLPGLLE---GLLAPAAVLGGELHLAHG- 492
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 558 sndfedsyQFLTNATFSVSIAcfGIFTAFLLY--KPFYSPLQNLNLLnsfakkgpkrifldkiiyliYDWSYNRGYIDTF 635
Cdd:COG1009 493 --------LLLNALPLLLSLL--GIALGYLLYlkRPLPALAERLKPL--------------------YRLLANKWYFDEL 542
|
650 660
....*....|....*....|....*.
gi 2314329369 636 YSISLTKGIRGLAKLThFFDRRVIDG 661
Cdd:COG1009 543 YDALFVKPVRALARFL-WFDRYVIDG 567
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
22-661 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 535.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 22 LLSIVMIFSVDLSiqqiNGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFA 101
Cdd:PRK06590 44 LLSLVVFFDFLLG----GGRAFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 102 YMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQ 181
Cdd:PRK06590 120 YLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 182 dlfEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIV 261
Cdd:PRK06590 200 ---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFEL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 262 IPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHS 341
Cdd:PRK06590 277 SPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 342 MeavvgyspEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFA-IIAWSTAGLTAFY 420
Cdd:PRK06590 357 M--------HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFY 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 421 MFRIYLLTFeghlnihfqkysgkksssfysiklWGKEEQKMINrnfrlfplltmnknekpytiggnvkkralisnfgykk 500
Cdd:PRK06590 429 SFRLIFLVF------------------------HGKEKEKIHH------------------------------------- 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 501 afsyPHESDNTMLFPMLILVLFTLFVGAIAIPLnqegmhldILSKLLTPSINLLHQNSNDFEdsyqfLTNATFSVSIACF 580
Cdd:PRK06590 448 ----PHESPAVMTLPLIVLAVLSVFAGALIVPP--------FLGVLPLTTELAHGEAEHHLP-----VWVALLPLVVALA 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 581 GIFTAFLLYkpfyspLQNLNLLNSFAKKGPkrifldkiiyLIYDWSYNRGYIDTFYSISLTKGIRGLAK-LTHFFDRRVI 659
Cdd:PRK06590 511 GIALAWLLY------LKKPTLPTSIAAPGR----------FLYTLLRNKYYFDELYEKVFVKPGLALARlLWKDGDDGII 574
|
..
gi 2314329369 660 DG 661
Cdd:PRK06590 575 DG 576
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
19-661 |
3.21e-161 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 476.39 E-value: 3.21e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 19 NILLLSIVMIFSVDLSIQQINGSS---IYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQA 95
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 96 YLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWIT 175
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 176 GSFEFQDLFEIFNNliynneVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 255
Cdd:TIGR01974 193 GTLNFQEVFALAPG------AFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 256 LPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGS 335
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 336 GSIIHSMeavvgyspEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSW--LYSPIFAIIAWST 413
Cdd:TIGR01974 347 GSVIHAM--------HHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIG 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 414 AGLTAFYMFRIYLLTFEGhlnihfqkysgkksssfysiklwgkeeqkminrnfrlfplltmnknekpytiggnvKKRAli 493
Cdd:TIGR01974 419 AFLTAFYSFRLIFMVFHG--------------------------------------------------------KERH-- 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 494 snfgykKAFSYPHESDNTMLFPMLILVLFTLFVGAIAIPLNQegmhldilskLLTPSINLLHQNSNDFEDSYQFLTNATF 573
Cdd:TIGR01974 441 ------EADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFE----------FLKGVLPTSAEPALEHHHVPALEIWSPT 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 574 SVSIAcfGIFTAFLLYkpfyspLQNLNLLNSFAKKGPKrifldkiiylIYDWSYNRGYIDTFYSISLTKGIRGLAKLTHF 653
Cdd:TIGR01974 505 AVAIL--GILLAYLLY------LGNPTLPAKIAQRHSG----------LYRLLLNKWYFDELYDKVFVKPYLFLGKLLWK 566
|
....*....
gi 2314329369 654 F-DRRVIDG 661
Cdd:TIGR01974 567 DpDDKIIDG 575
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
423-655 |
4.12e-136 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 398.52 E-value: 4.12e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 423 RIYLLTFEGHLNIHFQKYSGKKSSSFYSIKLWGKEEQKMINRNFRLFPLLTMNKNE-------KPYTIGGNVKKR----A 491
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEkvsffskKTYRIDGNVRNMtrpfI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 492 LISNFGYKKAFSYPHESDNTMLFPMLILVLFTLFVGAIAIPLNQEGMHLDILSKLLTPSINLLHQNSNDFEDSYQFLTNA 571
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 572 TFSVSIACFGIFTAFLLYKPFYSPLQNLNLLNSFAKKGPKRIFLDKIIYLIYDWSYNRGYIDTFYSISLTKGIRGLAKLT 651
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAELT 240
|
....
gi 2314329369 652 HFFD 655
Cdd:pfam01010 241 HFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
38-449 |
2.40e-112 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 350.85 E-value: 2.40e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 38 INGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSS 117
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 118 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVh 197
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 198 flfvTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITV 277
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 278 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgySPEksQNMV 357
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV------SDE--QDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 358 LMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSW-LYSPIFAI-IAWSTAGLTAFYMFRIYLLTFEGHLNI 435
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
410
....*....|....
gi 2314329369 436 HFQKYSGKKSSSFY 449
Cdd:MTH00210 439 KKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
21-429 |
1.45e-110 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 345.91 E-value: 1.45e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 21 LLLSIVMIFSVDLSI-----QQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQA 95
Cdd:MTH00020 30 ILTSSCLIISLSWSFlifyeILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 96 YLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWIT 175
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 176 GSFEFQDLFEIFNNLIYNNevhflfVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 255
Cdd:MTH00020 190 GSLDFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 256 LPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGS 335
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 336 GSIIHSMeavvgyspEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWL-YSPIFAI-IAWST 413
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFS 415
|
410
....*....|....*.
gi 2314329369 414 AGLTAFYMFRIYLLTF 429
Cdd:MTH00020 416 ALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
2-432 |
9.89e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 291.08 E-value: 9.89e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 2 LLFPTATKNLRRMWAFPNILLLSIVMIFsvdLSIQQINGSSIYQyvWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIF 81
Cdd:MTH00211 20 LLLPLNNSKLHIKKAVKLSFFISLIPLL---IFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWS 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 82 VLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGD 161
Cdd:MTH00211 95 ILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGD 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 162 FGLLLGILGFYWITGSFEFQDLFeifnnLIYNNEVHFLFvtlcasLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHA 241
Cdd:MTH00211 175 IGLLLSMVWLLLNLNSWEISQLF-----ILNLDLTLFLL------GLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHS 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 242 ATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHL 321
Cdd:MTH00211 244 STMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHI 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 322 ITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDswL 401
Cdd:MTH00211 324 CTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILES--M 393
|
410 420 430
....*....|....*....|....*....|....*
gi 2314329369 402 YSPIFAIIAWSTA----GLTAFYMFRIYLLTFEGH 432
Cdd:MTH00211 394 NGSYLNAWALLLTllatSLTAAYSFRLIFLSLGGY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
116-415 |
4.19e-84 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 266.10 E-value: 4.19e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 116 SSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNE 195
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 196 VHFLFVtlcasLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPYIMNLISLIG 273
Cdd:pfam00361 81 LLLLFL-----LILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 274 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgysp 350
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRR-------- 226
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2314329369 351 EKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAG 415
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
38-396 |
8.29e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 277.22 E-value: 8.29e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 38 INGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSS 117
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 118 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDL------FEIFNNLI 191
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 192 YNNEVHFL----FVTLcASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMN 267
Cdd:MTH00032 212 YGGGAYESplapFAII-GILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 268 LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRAALFHLITHAYSKALLFLGSGSIIHSMEAvv 346
Cdd:MTH00032 291 IITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-- 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2314329369 347 gyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 396
Cdd:MTH00032 369 -----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
19-429 |
8.47e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 271.07 E-value: 8.47e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 19 NILLLSIVMIFSVDLSIQQINGS--SIYQYVWSWTINNDFSFEFGYFIDSLtsimSILITTVGIFV----LIYSDNYMSH 92
Cdd:MTH00208 58 SISLLKTLAFLSLINLLIWILLGcpNINISLSNWLSNTLFNFSLSFIFDFY----FILFFSVALFVtwsiIEFSHYYMSN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 93 DQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFY 172
Cdd:MTH00208 134 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 173 WITGSFefqDLFEIFnnLIYNNEVHFLFVTLCASLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 252
Cdd:MTH00208 214 INFNSW---NLNEIL--SLNNSNSFLINILLFGILL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 253 ARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLF 332
Cdd:MTH00208 287 IRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLF 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 333 LGSGSIIHSMeavvgyspEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL-----SDSWLYSPIFA 407
Cdd:MTH00208 367 LCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILA 438
|
410 420
....*....|....*....|..
gi 2314329369 408 IIAwstAGLTAFYMFRIYLLTF 429
Cdd:MTH00208 439 LIA---TLLTAVYSFRIIFFCF 457
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-427 |
2.07e-79 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 267.56 E-value: 2.07e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 46 YVWSWTINNDFSFefgyFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIF 125
Cdd:PRK12647 48 YAWVPSLGVNLSF----LLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 126 WELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEiFNNLIYNNEvHFLFVTLca 205
Cdd:PRK12647 124 WELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHP-LYLAILL-- 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 206 sLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLAL 285
Cdd:PRK12647 200 -LVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 286 AQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmeavVGyspekSQNMVLMGGL 362
Cdd:PRK12647 279 RQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGL 349
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2314329369 363 RKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILsDSWLYSPIFAIIAWSTAGLTAFYMFRIYLL 427
Cdd:PRK12647 350 RRAMPITAAAALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
48-432 |
2.34e-79 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 263.56 E-value: 2.34e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 48 WSWTINNDFSFEFGYFIDSLtsimSILITTVGIFV----LIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIY 123
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQY----SLMFLPIALFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 124 IFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQdlfEIFNNLIYNnevhflfvTL 203
Cdd:MTH00004 142 IGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQ---QLFSPTQTP--------TL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 204 CASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATL 283
Cdd:MTH00004 211 PLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATC 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 284 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLMGGLR 363
Cdd:MTH00004 291 ALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQ 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2314329369 364 KHAPITQIAFLVGTLSLCGIPPLACFWSKD---EILSDSWLYSPIFAIIAWSTAgLTAFYMFRIYLLTFEGH 432
Cdd:MTH00004 363 KTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
48-424 |
1.60e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 261.38 E-value: 1.60e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 48 WSW-TINN---DFSFEFGYFidsltsimSILITTVGIFV----LIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNL 119
Cdd:MTH00066 64 FHWmNIFNfniNSSFKFDQY--------SIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 120 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnLIYNNEVHFL 199
Cdd:MTH00066 136 FQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 200 FvtlcaSLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLL 279
Cdd:MTH00066 211 L-----GLILA-AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLF 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 280 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLM 359
Cdd:MTH00066 285 TAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKM 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2314329369 360 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS-------DSWlySPIFAIIAWStagLTAFYMFRI 424
Cdd:MTH00066 357 GGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEamntsnlNSW--ALILTLIATS---FTAVYSFRI 423
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
16-431 |
1.01e-77 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 259.84 E-value: 1.01e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 16 AFPNILLLSIVMIFSVdLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQA 95
Cdd:PRK07390 40 AYLNLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 96 YLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWIT 175
Cdd:PRK07390 119 LARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLA 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 176 GSFEFQDLFEIFNnliyNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARL 255
Cdd:PRK07390 199 GTLNFSDLAAWAA----TANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 256 LPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGS 335
Cdd:PRK07390 274 QPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSV 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 336 GSIIHSmeavvgyspEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAG 415
Cdd:PRK07390 354 GSIILT---------TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNA 424
|
410
....*....|....*.
gi 2314329369 416 LTAFYMFRIYLLTFEG 431
Cdd:PRK07390 425 LTAFNLTRVFRLVFLG 440
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-425 |
1.20e-75 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 248.91 E-value: 1.20e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 1 LLLFPTATKNLRRMWAfpnILLLSIVMIFSVDLSIQQINGSSIYQYVWSWTinndFSFEFGYFIDSLTSIMSILITTVGI 80
Cdd:COG0651 18 LLLLLGRRRRLQRALS---LLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVADRLSALFLLLTALVAL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 81 FVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAAnACQKAFVTNRIG 160
Cdd:COG0651 91 AVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALR-AGLKYLILNLVG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 161 DFGLLLGILGFYWITGSFEFQDLFEIFnnliynNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAM-EGPTPISALI 239
Cdd:COG0651 170 SALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSALL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 240 HAAtMVAAGIFLVARLLPLFI---VIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR- 315
Cdd:COG0651 244 SGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLg 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 316 --AALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKD 393
Cdd:COG0651 323 laGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKW 393
|
410 420 430
....*....|....*....|....*....|....*..
gi 2314329369 394 EIL-----SDSWLYSPIFAIiawsTAGLTAFYMFRIY 425
Cdd:COG0651 394 LLLqaaleAGAWLLAAVLLL----SSLLTLAYFVRIF 426
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
48-432 |
7.80e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 251.70 E-value: 7.80e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 48 WSW----TINNDFSFEFGYFidsltsimSILITTVGIFV----LIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNL 119
Cdd:MTH00108 66 WHWmtiqTLKLSLSFKLDYF--------SMIFIPVALFVtwsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 120 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLiynnevhfL 199
Cdd:MTH00108 138 FQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNN--------S 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 200 FVTLcASLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLL 279
Cdd:MTH00108 210 NLPL-MGLLLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 280 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLM 359
Cdd:MTH00108 288 TAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKM 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 360 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL-------SDSWLYSpiFAIIAWStagLTAFYMFRIYLLTFEGH 432
Cdd:MTH00108 360 GGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIeaantsyTNAWALL--ITLIATS---LTAAYSTRIIFFALLGQ 434
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
48-424 |
1.31e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 248.59 E-value: 1.31e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 48 WSW----TINNDFSFEFGYFidsltsimSILITTVGIFV----LIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNL 119
Cdd:MTH00137 70 WNWmntlTFDINISFKFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNM 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 120 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLllgILGFYWI---TGSFEFQDLFEIFNNLIynnev 196
Cdd:MTH00137 142 FQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---ILAMAWMatnLNSWEIQQIFALSKDFD----- 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 197 hflfVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIIT 276
Cdd:MTH00137 214 ----LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALT 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 277 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNM 356
Cdd:MTH00137 290 TLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDI 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2314329369 357 VLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEI---LSDSWL--YSPIFAIIAWStagLTAFYMFRI 424
Cdd:MTH00137 362 RKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRV 431
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
60-432 |
1.56e-71 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 247.15 E-value: 1.56e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 60 FGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYL-RFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 138
Cdd:PRK12645 72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 139 FWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEifNNLIYNNEVHFLFVTLcasLLFAGAVAKSAQ 218
Cdd:PRK12645 152 YWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIA--NADEIQNSPLFIPAMI---LILLGAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 219 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 298
Cdd:PRK12645 227 FPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 299 MSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeavVGyspekSQNMVLMGGL 362
Cdd:PRK12645 307 VSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 363 RKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS-------------DSWLYspIFAIIAWSTAGLTAFYMFRIYLLTF 429
Cdd:PRK12645 378 MTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanlfslDTWGV--LFPVIAWVASVFTFVYSIIFIFKTF 455
|
...
gi 2314329369 430 EGH 432
Cdd:PRK12645 456 FGK 458
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
56-431 |
1.69e-71 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 247.07 E-value: 1.69e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 56 FSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 135
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 136 LIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIynNEVHFLFVTLcasLLFAGAVAK 215
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAMV---LVLLGAFTK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 216 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLA 295
Cdd:TIGR00940 220 SAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 296 YSTMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeavvgyspEKSQNMVLM 359
Cdd:TIGR00940 300 FSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKL 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 360 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS-------------DSWLYspIFAIIAWSTAGLTAFYMFRIYL 426
Cdd:TIGR00940 371 GGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIH 448
|
....*
gi 2314329369 427 LTFEG 431
Cdd:TIGR00940 449 GVFFG 453
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
60-409 |
4.81e-69 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 232.94 E-value: 4.81e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 60 FGYFIDSLTSIMSILITTVGIFVLIYSDNYMS-------HDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMC 132
Cdd:PRK06525 69 FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 133 SYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYnneVHFLFVtlcaslLFAgA 212
Cdd:PRK06525 149 SWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY---LVFLGI------LFA-A 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 213 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPYIMnliSLIGIITVLLGATLALAQK 288
Cdd:PRK06525 218 WGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIqsmgPIPHVIGYVG---AVMAIVTLLYGFLMYLPQQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 289 DIKRGLAYSTMSQLGYMMLALGMGSY------RAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQNMVLMGGL 362
Cdd:PRK06525 295 DMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGV 365
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2314329369 363 RKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAII 409
Cdd:PRK06525 366 LKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
55-410 |
8.26e-69 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 241.63 E-value: 8.26e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 55 DFSFefgyFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSY 134
Cdd:PRK12648 69 NLSL----RLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 135 LLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfNNLIYNnevHFLFV-TLCASLLfaGAV 213
Cdd:PRK12648 145 LLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAA-GDLIRA---HPLYPpALVLILL--GAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 214 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRG 293
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 294 LAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAvvgyspeKSQNMVLMGGLRKHAPITQ 370
Cdd:PRK12648 299 LAYSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITA 369
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2314329369 371 IAFLVGTLSLCGIPPLACFWSK----DEILSDSWLYS-----PIFAIIA 410
Cdd:PRK12648 370 TLAMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA 418
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
59-393 |
4.02e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 237.42 E-value: 4.02e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 59 EFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 138
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 139 FWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFefqDLFEIFNN--LIYNNEVHFLFVTLCAsLLFAGAVAKS 216
Cdd:PRK12649 153 YWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTY---DIATILQDseLIENIKGHPLFLITLI-LIFIGAAAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 217 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAY 296
Cdd:PRK12649 229 AQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAY 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 297 STMSQLGYMMLALGMGSYR-------AALFHLITHAYSKALLFLGSGSIIHsmEAVvgyspekSQNMVLMGGLRKHAPIT 369
Cdd:PRK12649 309 STISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH--EAA-------TRDIRKLGGLRKEMPIT 379
|
330 340
....*....|....*....|....
gi 2314329369 370 QIAFLVGTLSLCGIPPLACFWSKD 393
Cdd:PRK12649 380 FIVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-392 |
1.18e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 235.97 E-value: 1.18e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 46 YVWSW--TINNDFSFEFgyfiDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYL-RFFAYMSLFNTSMLGLVTSSNLIQI 122
Cdd:PRK12644 56 EVVPWipSLGLDLAFRL----DALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 123 YIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYnnevhflfVT 202
Cdd:PRK12644 132 YVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPTGPA--------VS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 203 LCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGAT 282
Cdd:PRK12644 204 VAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGW 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 283 LALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHL---ITHAYSKALLFLGSGSIIHSmeavVGyspekSQNMVLM 359
Cdd:PRK12644 284 RALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKL 354
|
330 340 350
....*....|....*....|....*....|...
gi 2314329369 360 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 392
Cdd:PRK12644 355 SGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
48-435 |
7.20e-64 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 226.17 E-value: 7.20e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 48 WSWTINNDFSFEfgyfIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYL-RFFAYMSLFNTSMLGLVTSSNLIQIYIFW 126
Cdd:PRK12646 64 WMKTLDINLDLR----LDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFW 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 127 ELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLiyNNEVHFLFVTLCas 206
Cdd:PRK12646 140 ELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFM-- 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 207 lLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALA 286
Cdd:PRK12646 216 -FLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALK 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 287 QKDIKRGLAYSTMSQLGYMMLALGMG-----------------SYRAALFHLITHAYSKALLFLGSGSIIHSmeavvgys 349
Cdd:PRK12646 295 QWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE-------- 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 350 pEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKD----------EILSDSWLYSPIFAIIAWSTAGLTAF 419
Cdd:PRK12646 367 -AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFT 445
|
410
....*....|....*.
gi 2314329369 420 YMFRIYLLTFEGHLNI 435
Cdd:PRK12646 446 YALYMVKEVFWGKYDS 461
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
20-463 |
2.17e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 214.62 E-value: 2.17e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 20 ILLLSIVMIFsvdLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSI-MSI--LITTVgifVLIYSDNYMSHDQAY 96
Cdd:MTH00165 11 LFFLSLILFF---LGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLfMSFvlFISSM---VIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 97 LRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPAAANACQKAFVTNRIGDFGLLLGIlGFYWITG 176
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 177 SFEFqdlfeIFNNLIYNNEVHFLFVTLcasLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 256
Cdd:MTH00165 163 SWNF-----IFYLDFMKNSFEMLLIGL---LIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 257 PLFIvIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSG 336
Cdd:MTH00165 235 NLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 337 SIIHSMEAvvgyspekSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKD---EILSDSWLYSPIFAIIAWST 413
Cdd:MTH00165 314 SIIHNMSN--------SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2314329369 414 aGLTAFYMFRIYLltfeghlnihfqkYSGKKSSSFYSIKLWGKEEQKMIN 463
Cdd:MTH00165 386 -GLTVSYSFRLIY-------------YSMSGDFNLKSLNNLSDESKFMLK 421
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
20-449 |
2.36e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 208.93 E-value: 2.36e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 20 ILLLSIVMIFSVDLSIQQINGSSiyqYVWSWTINN----DFSFEFgyFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQA 95
Cdd:MTH00151 9 FLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSvsscSFSFEL--VLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 96 YLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFvTNRIGDFGLLLGILGFYwIT 175
Cdd:MTH00151 84 LKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV-LL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 176 GSFefqdlfeifnNLIYNNEVHFLFVTLCasLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 255
Cdd:MTH00151 162 GHW----------SILSMWDFKLSGWLGL--LLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRF 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 256 LPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGS 335
Cdd:MTH00151 230 FPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCA 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 336 GSIIHSMEAVvgyspeksQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS---DSWLYSPIFAIIAWS 412
Cdd:MTH00151 310 GSIIHSSSGT--------QDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMFVG 381
|
410 420 430
....*....|....*....|....*....|....*..
gi 2314329369 413 TaGLTAFYMFRIYLLTFEGHLNIHFqkYSGKKSSSFY 449
Cdd:MTH00151 382 V-GLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
20-435 |
2.80e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 206.03 E-value: 2.80e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 20 ILLLSIVMIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRF 99
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 100 FAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFwFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWItGSFe 179
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIY-YQNSKSLSAGMLTALTNRVGDALLILSIAWMLMH-GNW- 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 180 fqdlfeifnNLIYNNEVHFLFVTLCASLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 259
Cdd:MTH00209 163 ---------NIFYLNFNSNLGSVISVLIVLA-AMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 260 IVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 339
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 340 HSMeavvgyspEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILsDSWLYS--PIFAIIAWSTA-GL 416
Cdd:MTH00209 313 HSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESnmPIMTLILMFLStSL 383
|
410
....*....|....*....
gi 2314329369 417 TAFYMFRIYLLTFEGHLNI 435
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNSS 402
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-440 |
3.77e-55 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 195.69 E-value: 3.77e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 1 LLLFPTATKNLRRMWAFpniLLLSIVMIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGI 80
Cdd:COG1008 20 LLLLPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVESYPWIPSLGISYHLGVDGISLPLVLLTALLTP 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 81 FVLIYSDNYMSHDQAylRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPAAANacqKAFVTNR 158
Cdd:COG1008 97 LAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAAI---KFFLYTL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 159 IGDFGLLLGILGFYWITGSFEFqDLFEIFNNLIYNNEVHFLFvtlcASLLFAGAVaKSAQFPLHVWLPDA-MEGPTPISA 237
Cdd:COG1008 172 AGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLF----LAFFIAFAV-KVPMFPFHTWLPDAhVEAPTAGSV 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 238 lIHAATMVAAGIFLVARL-LPLFiviP----YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG 312
Cdd:COG1008 246 -LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFAL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 313 ---SYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACF 389
Cdd:COG1008 322 nplGLQGAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGF 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2314329369 390 WSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIHFQKY 440
Cdd:COG1008 393 VGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAEL 443
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
41-431 |
8.31e-53 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 189.80 E-value: 8.31e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 41 SSIYQYVWSWTINNDFSFEFG---------YFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSML 111
Cdd:PRK12667 48 LSILLFIQVYSSNKPIVYLFGgwpapigivYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGML 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 112 GLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLI 191
Cdd:PRK12667 128 GILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLS 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 192 YNNEVHfLFVTLCASLLFAGAVA------KSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL-------- 256
Cdd:PRK12667 208 FPLTGG-LAGNPPLALGVALALAlwaftiKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgisp 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 257 PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFL 333
Cdd:PRK12667 286 SLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFL 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 334 GSGSIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKdEILSDSWLYS--PIFAIIAW 411
Cdd:PRK12667 366 ASGVFIHAA---------GTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLL 435
|
410 420
....*....|....*....|
gi 2314329369 412 STAGLTAFYMFRIYLLTFEG 431
Cdd:PRK12667 436 IASAISLVGYFRAWYSLFFG 455
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-426 |
2.04e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 189.98 E-value: 2.04e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 1 LLLFPTATKNLRRMWAFpnilllsIVMIFSVDLSIQQINGSSIYQyvwsWTINNDFS--FEFGYFIDSLTSIMSILITTV 78
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE----WEIFTISSspINFTIILDPTGTLFSSTVLFI 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 79 GIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPAAANACQKAFVTNR 158
Cdd:MTH00207 70 SANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 159 IGDFGLLLGIlGF-----YWITGSFEFQDlfeiFNNLIynnevhflfvTLCASLlfaGAVAKSAQFPLHVWLPDAMEGPT 233
Cdd:MTH00207 149 IGDVMLLLSI-GWtlnqgHWSITNMWQTD----MNNYI----------ALSIMI---AAMTKSAQMPFSSWLPAAMAAPT 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 234 PISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS 313
Cdd:MTH00207 211 PVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGM 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 314 YRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKD 393
Cdd:MTH00207 291 PKLALFHLITHALFKALLFVCAGSLIHSH--------HHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKD 362
|
410 420 430
....*....|....*....|....*....|....*.
gi 2314329369 394 EILSDSwLYSP---IFAIIAWSTAGLTAFYMFRIYL 426
Cdd:MTH00207 363 LILESS-LFYPhnsLMILMIFLATALTAAYSTRFTL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
59-422 |
1.70e-51 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 192.18 E-value: 1.70e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 59 EFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 138
Cdd:PRK12650 72 NLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 139 FwfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSfefQDLFEIFNNLIYNNEVHFLFVTlcASLLFAGAVAKSAQ 218
Cdd:PRK12650 152 R--SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AVLIAVAAFTKSAQ 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 219 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 298
Cdd:PRK12650 225 FPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 299 MSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAvvgyspeKSQNMVLMGGLRKHAPITQIAFLV 375
Cdd:PRK12650 305 VSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTI 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2314329369 376 GTLSLCGIPPLACFWSKdEILSDSWLYSPIFAIIAW---STAGLTAFYMF 422
Cdd:PRK12650 376 AALSMAAVPPLFGFVSK-EGMLTAFLEAPGGNAGVVlllVGAALGAVFTF 424
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
62-424 |
2.27e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 185.08 E-value: 2.27e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 62 YFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAylRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 141
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 142 TRpAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliynnEVHFLFVTLcaSLLFAGAVAKSAQFPL 221
Cdd:PRK08375 151 DR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVFPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 222 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAY 296
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 297 STMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIihsmEAVVGyspekSQNMVLMGGLRKHAPITQIAF 373
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAF 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2314329369 374 LVGTLSLCGIPPLACFWSKDEILS---DSWLYSPIFAIIAWSTagLTAFYMFRI 424
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVgavEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-431 |
1.20e-48 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 178.37 E-value: 1.20e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 3 LFPTATKNLRRMWAfpnILLLSIVMIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEFGYF-------IDSLTSIMSILI 75
Cdd:PRK08376 23 IVSLLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLTLPFGSGGFpiriiweVDLFGAFMALIA 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 76 TTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFV 155
Cdd:PRK08376 100 TIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMF 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 156 TNRIGDFGLLLGILGFYwitGSFEFQDLFEIFNNLIYNNevhFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAM-EGPTP 234
Cdd:PRK08376 180 VGSLASSMVLLGIALLY---GQYGTLNMAYLAVKMSENP---TVVAKIALALFIAGLAMKSGAVPVHMWLPDAYpAAPSS 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 235 ISALIHAATmvAAGIFLVARLlpLFIVIPYIMNL------ISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLA 308
Cdd:PRK08376 254 ISAMLLVIK--QAGLYALARV--LFSIYGPAINLatvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLG 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 309 LGMG---------------SYRAALFHLITHAYSKALLFLGSGSIIHsmeaVVGyspekSQNMVLMGGLRKHAPITQIAF 373
Cdd:PRK08376 330 LGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIY----ETG-----TRNLNELGGLARTMPKTTIAF 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2314329369 374 LVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 431
Cdd:PRK08376 401 LIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-424 |
3.75e-44 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 164.90 E-value: 3.75e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 47 VWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTS-MLGLVTSSNLIQIYIF 125
Cdd:COG1007 51 LLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLG 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 126 WELVGMCSYLLIGFWFTRPAAANACQKAFVtnrIGDFG---LLLGILGFYWITGSFEFQDLFEIFNNLIYNNevhfLFVT 202
Cdd:COG1007 131 LELLSLSLYVLVAFRRDDRRSSEAALKYFL---LGALSsgfLLYGISLLYGATGSLNLAGIAAALAAGGANS----PLLL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 203 LCASLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPYIMNLISLIGIITVLL 279
Cdd:COG1007 204 LGLVLVLAGLAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 280 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLgsgsIIhsmeAVVGYSPEKSQNM 356
Cdd:COG1007 283 GNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEI 354
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2314329369 357 VLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSW---LYspIFAIIAWSTAGLTAFYMFRI 424
Cdd:COG1007 355 EDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
41-392 |
1.92e-40 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 156.70 E-value: 1.92e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 41 SSIYQYVWSWTIN---------NDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLfnTSML 111
Cdd:PRK08668 35 PLLFLIKLYFTLKvgtgekltlFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 112 GLVTSSNLIQIYIFWELVGMCSYLLI--GFWFTRPAAAnacqKAFVTNRIGDFGLLLGILGFYWITGSFEFQDlfeIFNN 189
Cdd:PRK08668 113 GVFLANDLLTLYIFWEIMTFSSFMMVpmGKKESRKASL----KYFVLSAIGAYAMLYAIFLIYAKTGTFDFAD---ISQG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 190 LIynNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP--------- 257
Cdd:PRK08668 186 LI--NDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefg 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 258 LFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLG 334
Cdd:PRK08668 264 TYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLI 343
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2314329369 335 SGSIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 392
Cdd:PRK08668 344 FAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
46-424 |
1.12e-39 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 152.28 E-value: 1.12e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 46 YVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMShDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIF 125
Cdd:PRK05777 53 LFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 126 WELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFE-IFNNLIYNNEVHFLFVTLC 204
Cdd:PRK05777 132 LELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKaLADGSGNSLLLLFGLVFLL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 205 ASLLFagavaKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLPLFI--VIPYIMNLISLIGIITVLLGA 281
Cdd:PRK05777 212 VGLAF-----KLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGN 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 282 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKallfLGSGSIIHSMEAVVGYSPEKSQnmvl 358
Cdd:PRK05777 286 LAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD---- 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2314329369 359 MGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDS------WLyspifAIIAWSTAGLTAFYMFRI 424
Cdd:PRK05777 358 FAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAveaglwWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
64-431 |
3.08e-39 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 153.89 E-value: 3.08e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 64 IDSLTSIMSILITTVGIFVLIYSDNYMS--HDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 141
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFReyEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 142 TRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLfeifnnliynNEVHF--LFVTLCASLLFAGAVAKSAQF 219
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM----------RAAHLspFWASLVFLLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 220 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIP-----YIMnLIslIGIITVLLGATLALAQKDIKRG 293
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwwwgVLV-LA--LGAISAVLGVLYALAEHDLKRL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 294 LAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSMEavvgyspekSQNMVLM 359
Cdd:PRK06521 304 LAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKL 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 360 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL--------SDSWLYS---PIFAIIAWSTAGLTAFYMFRIYLLT 428
Cdd:PRK06521 375 GGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGIT 454
|
...
gi 2314329369 429 FEG 431
Cdd:PRK06521 455 FLG 457
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
21-434 |
1.97e-38 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 148.81 E-value: 1.97e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 21 LLLSIVMIFSVDLSIQQINgsSIYQYVWSWTINndFSFEFGyfIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAylrff 100
Cdd:PRK05846 43 LLLSLVLWIGFDSSNAGFQ--FVEKHPWIPRFG--ISYHLG--VDGISLLLVVLTALLTPLAVLASWEEIKKRVK----- 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 101 AYMSLF---NTSMLGLVTSSNLIQIYIFWE--LVGMcsYLLIGFW--FTRPAAANacqKAFVTNRIGDFGLLLGILGFYW 173
Cdd:PRK05846 112 FYMAALlwlEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKNRIYAAT---KFFLYTLLGSLLMLVAIIYLVV 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 174 I----TGSFEFQDLFeifNNLIYNNEVHFLFVtlcaSLLFAGAVaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGI 249
Cdd:PRK05846 187 VyynaTGTFDIADLL---NLPLPPGVQYWLFL----AFFIAFAV-KMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGA 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 250 F-LVARLLPLFIVIP-YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLITH 324
Cdd:PRK05846 259 YgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISH 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 325 AYSKALLFLGSGSIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSP 404
Cdd:PRK05846 339 GLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNP 409
|
410 420 430
....*....|....*....|....*....|
gi 2314329369 405 IFAIIAWSTAGLTAFYMFRIYLLTFEGHLN 434
Cdd:PRK05846 410 VIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
20-440 |
6.20e-37 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 144.31 E-value: 6.20e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 20 ILLLSIVMIFSVDLSiqqingSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYlrF 99
Cdd:TIGR01972 37 TLLLSLLLLFQFDPT------GSGFQFTEDIPWIPALGISYHLGVDGISLLLVLLTALLTLLAILASWESIQKRVKE--F 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 100 FAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITG-SF 178
Cdd:TIGR01972 109 YALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTF 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 179 efqDLFEIFNNLIYNNEVHFLFVtlcaSLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLP 257
Cdd:TIGR01972 188 ---DLLELLNLPLPFGVQTWLFL----AFFIAFAV-KVPLFPLHTWLPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 258 LFiviP----YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKAL 330
Cdd:TIGR01972 260 LF---PdaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGisgAVFQMISHGLITAA 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 331 LFLGSGSIihsmeavvgYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIA 410
Cdd:TIGR01972 337 LFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLA 407
|
410 420 430
....*....|....*....|....*....|
gi 2314329369 411 WSTAGLTAFYMFRIYLLTFEGHLNIHFQKY 440
Cdd:TIGR01972 408 ALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
65-339 |
2.20e-36 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 143.30 E-value: 2.20e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 65 DSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 144
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 145 AAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFlfvtlCASLLFAGAVAKSAQFPLHVW 224
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPSLQA-----AALLLVLAVILKTAQLPVHGW 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 225 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 304
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
250 260 270
....*....|....*....|....*....|....*
gi 2314329369 305 MMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 339
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
56-429 |
6.51e-36 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 141.98 E-value: 6.51e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 56 FSFEFGYFIDSLtsIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 135
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 136 LIGF---WFTRPAAANAcqkaFVTNRIGDFGLLLgilgfywitgsfefqdlfeIFNNLIYNNEVHFLFVTLCAS---LLF 209
Cdd:MTH00095 115 LVLFynnWDSNSGAMNT----ALTNRIGDFFIFL-------------------FFSGFIFSSYYFFSFSFFSSSmilMLL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 210 AGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpYIMNLISLIGIITVLLGATLALAQKD 289
Cdd:MTH00095 172 LTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEED 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 290 IKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAvvgyspekSQNMVLMGGLRKHAPIT 369
Cdd:MTH00095 251 MKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFG--------QQDGRNYSNNGNLPMFI 322
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2314329369 370 QIAFLVGTLSLCGIPPLACFWSKDEILSDSWL--YSPIFAIIAWSTAGLTAFYMFRIYLLTF 429
Cdd:MTH00095 323 QLQLLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-424 |
1.09e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 138.03 E-value: 1.09e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 50 WTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYL--RFFAYMSLFNTSMLGLVTSSNLIQIYIFWE 127
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSssRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 128 LVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDlfeifNNLIYNNEVHFLFvtlcasL 207
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVS-----GGLFSKNQSIILL------L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 208 LFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIM------NLISLIGIITVLLGA 281
Cdd:PRK06589 216 MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 282 TLALAQKDIKRGLAYSTMSQLGYMMLALGM---GSYRAALFHLITHAYSKALLFLGSGSIihsmeavvgYSPEKSQNMVL 358
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDK 366
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2314329369 359 MGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL-----SDSWLYSPIFAIIAWSTAGLTAFYMFRI 424
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
58-392 |
3.44e-34 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 138.33 E-value: 3.44e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 58 FEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSH----DQAYLrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCS 133
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHmssnERANL-LSALTALFILSMLGVVASANTFSFLFFWEIMALSS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 134 YLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLfeifnnliynnEVHFLFVTLCASLLFAGAV 213
Cdd:PRK08667 148 FFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFG 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 214 AKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKR 292
Cdd:PRK08667 217 IKAGIIPFHKWLPYAHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 293 GLAYSTMSQLGYMMLALG--------------MGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQNMVL 358
Cdd:PRK08667 297 LLAYSSIENIGIILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEK 367
|
330 340 350
....*....|....*....|....*....|....
gi 2314329369 359 MGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 392
Cdd:PRK08667 368 MGGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-431 |
2.14e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 130.84 E-value: 2.14e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 57 SFEFGYFIDSLTSIMSILITTVGIFVLIYSdnyMSHDQAylRFFAYMSLFNTSMLGLV-TSSNLIQIYIFWELVGMCSYL 135
Cdd:PRK07234 58 NFGVTLRADALSGYFILTNALVTLAVIFYC---WESAKT--RFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 136 LIGFWFTRPAAANACQKAFVTNRIGDFgLLLGILGFYWITGSFEFQDLFEIfnnliynnevhflfVTLCASLLFAGAVAK 215
Cdd:PRK07234 133 LVAYPRTDRAIWVGLRYLFYSNVAMLF-YLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVK 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 216 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLplfIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLA 295
Cdd:PRK07234 198 GGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLA 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 296 YSTMSQLGYMMLALGMGsyraALFHLiTHAYSKALLFLGSGsIIHSmeavvgYSPEKSQNMVLMGGLRkhapitqIAFLV 375
Cdd:PRK07234 275 FSTISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAG-ALPS------RNFTELISQMLGIGKW-------IPLTM 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2314329369 376 GTLSLCGIPPLACFWSKDEILSDswlYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 431
Cdd:PRK07234 336 ASFSIAGFPLLAGFVSKVLTLKN---LLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
63-408 |
3.20e-32 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 130.82 E-value: 3.20e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 63 FIDSLTSIMSILITTVGIFVLIYSDNYMSHDQ-------AYLRFFAYM-SLFNTSMLGLVTSSNLIQIYIFWELVGMCSY 134
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 135 LLIGFWFTRpAAANACQKAFVTNRIG-DFGLLLGILGFYWITGSFEFQDLFEIFNNLI-YNNEVHFLFVTLCASLLFAGA 212
Cdd:PRK06458 146 LLVGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 213 VAKSAQFPLHVWLPDA-MEGPTPISALihaatmvaagifLVARLLP--LFIVIPYIM------------NLISLIGIITV 277
Cdd:PRK06458 225 GTKVGLFPMHAWLPDAhSEAPSPVSAL------------LSGVLLNvaLYAVLRYYIlidaaigsdfpgRLLLIFGLLSV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 278 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQ 354
Cdd:PRK06458 293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTR 363
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2314329369 355 NMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDS-----WLYSPIFAI 408
Cdd:PRK06458 364 DINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGlargpLLIAILLLL 422
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
102-396 |
2.56e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 127.96 E-value: 2.56e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 102 YMSLFNTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRpAAANACQKAFVTNRIGDFGLLLGILGFYWITGSF 178
Cdd:PRK08377 110 YAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKTG-EAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 179 EFQDLFEIFNNLiyNNEVhflfVTLCASLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLP 257
Cdd:PRK08377 189 NMAHIAQLAGTI--DPTV----AQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILY 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 258 LFIVIP---YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALL 331
Cdd:PRK08377 262 LMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALL 341
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2314329369 332 FLGSGSIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 396
Cdd:PRK08377 342 FLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
47-424 |
8.92e-30 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 123.13 E-value: 8.92e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 47 VWSWTINNDFSFEFgYFIDSLTSIMSILITTVGIFVLIYSDNYMShdQAYLRFFAYMSLFNTSMLG---LVTSSNLIQIY 123
Cdd:TIGR01770 52 TLQYAAYLFTGFSF-FIVDNFALLIKLILLLSTLLTFFFALSYLS--KEKINKFEFYILLLFALLGiflLVSSNDLLSIY 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 124 IFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNevHFLFvtL 203
Cdd:TIGR01770 129 LGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNI--SLLL--L 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 204 CASLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFIVIPYIMNLISLIGIITVLLGA 281
Cdd:TIGR01770 205 GIVLILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGN 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 282 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgSIIHSMEAvvgYSPEKSQNMVL 358
Cdd:TIGR01770 285 FGALAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRS---YKDEWIEYISD 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2314329369 359 MGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL-----SDSWLYSPIFAIiawsTAGLTAFYMFRI 424
Cdd:TIGR01770 358 FAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVL----TSVIGAFYYLRV 424
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
64-361 |
3.18e-29 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 122.07 E-value: 3.18e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 64 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSlFNTSMLGLVTSSNLIQIY-IFWELVGMCSYLLIG---F 139
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFT-FTTGFASLAWLSGDLRLMaLCWGATLLGLTLLIGlnkG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 140 WftRPAAANACQKAFVTNrIGDFGLLLGILGFYWITGSFEfqdlfeIFNNLIYNNEVHF-LFVTLCASLLFAGAV-AKSA 217
Cdd:PRK08601 149 W--KVAREAAKISGMLFL-ISWLALALAIVWLFIATGEWQ------LTSVLSNENLAQLgTWEKTGINLLLILAVmIPAA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 218 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPYIMNLIslIGIITVLLGATLALAQKDIKRGLAY 296
Cdd:PRK08601 220 QWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVG 296
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2314329369 297 STMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaVVGYSPEKSQNMVLMGG 361
Cdd:PRK08601 297 STMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
64-397 |
5.49e-29 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 121.93 E-value: 5.49e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 64 IDSLTSIMSILITTVGIFVLIYSdnymSHDQAYLRFFAYMSLFNTSmLGLVTSSNLIQIYIFWELVGMCSYLLIgfWFTR 143
Cdd:PRK12668 65 VDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTSTFLV--WARG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 144 -PAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqDLFEIFNnliynnevhflfvTLCASLLFAGAVAKSAQFPLH 222
Cdd:PRK12668 138 tKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPLH 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 223 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYImnlisliGIITVLLGATLALAQKDIKRGLAYSTMSQL 302
Cdd:PRK12668 204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYI-------GAAMAVYGVFFALLENDLRRLLSYHIVSQV 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 303 GYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHsmeaVVGYSpeksqNMVLMGGLRKHAPITQIAFLVGTLS 379
Cdd:PRK12668 277 GYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLY----RTGTE-----KLTELGGLYRSMPLTALFCLVGALS 347
|
330
....*....|....*...
gi 2314329369 380 LCGIPPLACFWSKDEILS 397
Cdd:PRK12668 348 ISAFPLFSGFVSKSMIIS 365
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
20-429 |
6.10e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 112.28 E-value: 6.10e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 20 ILLLSIVMIFSVDLSIqqiNGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRF 99
Cdd:MTH00063 2 VLLVSLLLCLLIFFLF---LVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 100 FAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFE 179
Cdd:MTH00063 79 NKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 180 FQDLFeifnnliynnevhFLFVTLcasllfagavAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPLF 259
Cdd:MTH00063 158 LCCLF-------------FFLIVF----------TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDYL 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 260 IVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 339
Cdd:MTH00063 214 LGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVM 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 340 hsmeavVGYSPEKSQNMVLMGGLRKHAPITQIAFLVgtLSLCGIPPLACFWSKDEILSD--SWLYSPIFAIIAWSTAGLT 417
Cdd:MTH00063 294 ------SGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFLS 365
|
410
....*....|..
gi 2314329369 418 AFYMFRIYLLTF 429
Cdd:MTH00063 366 YLYSFRLCLILF 377
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
65-431 |
2.14e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 110.42 E-value: 2.14e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 65 DSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 144
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 145 AAANACqKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVhflFVTLCASLLFAGAVAKSAQFPLHVW 224
Cdd:PRK07691 156 QLRESI-KYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 225 LPDAMEGP-TPISALIhAATMVAAGIFLVARLLPLFIV--IPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 301
Cdd:PRK07691 232 LPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIA 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 302 LGYMMLALGMG---SYRAALFHLITHAYSKALLFLgsgsIIHSMEAVVGYSPEKSqnmvlMGGLRKHAPITQIAFLVGTL 378
Cdd:PRK07691 311 VGVILVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAAL 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2314329369 379 SLCGIPPLACFWSKDEILSDSWLY-SPIFAIIAWSTAGLTAFYMFRIYLLTFEG 431
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
65-429 |
1.60e-24 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 107.73 E-value: 1.60e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 65 DSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 144
Cdd:PRK12663 76 DSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQERE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 145 AAANACQKAFVtNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVhflfvTLCASLLFAGAVAKSAQFPLHvW 224
Cdd:PRK12663 156 QLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL-----TTIALLFLLAFGMKAALFPFM-W 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 225 LPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPYIMN-LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 301
Cdd:PRK12663 229 LPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQVISS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 302 LGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIhsmeAVVGYSPEKSqnmvlMGGLRKHAPITQIAFLVGTL 378
Cdd:PRK12663 308 IGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLILIF 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2314329369 379 SLCGIPPLACFWSKDEILSDS------WLYSPIFAiiawsTAGLTAFYMFRIYLLTF 429
Cdd:PRK12663 379 AIGGLPPFSGFWGKVLLVQGAldngayILLALMLI-----TSLITMYSLFRIFFLAY 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
8-424 |
2.75e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 106.74 E-value: 2.75e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 8 TKNLRRMWAFPNILLLsIVMIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEfgyfIDSLTSIMSILITTVGIFVLIYSd 87
Cdd:PRK12662 23 LKNRKLVKIISCIVVA-VSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSATMLVLVNFIAVMSVLYG- 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 88 NYMSHDQ----AYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQkAFVTNRIGDFG 163
Cdd:PRK12662 97 IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFE-YLIIGTIGATF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 164 LLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHF--LFVTLcasllfaGAVAKSAQFPLHVWLPDAM-EGPTPISALIh 240
Cdd:PRK12662 176 YLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIgvLFIMV-------GLFIKAALFPFHKWLIQAYsEAPSFISVFF- 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 241 AATMVAAGIFLVARLL------PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 314
Cdd:PRK12662 248 SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTY 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 315 R---AALFHLITHAYSKALLFLGSGSIIHSMEavvgyspekSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWS 391
Cdd:PRK12662 328 YglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVA 398
|
410 420 430
....*....|....*....|....*....|....*.
gi 2314329369 392 KDEILS---DSWLYSPIFAIIAWStaGLTAFYMFRI 424
Cdd:PRK12662 399 KWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
20-453 |
3.45e-22 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 100.46 E-value: 3.45e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 20 ILLLSIVMIFSVDLSIQQINGS------------SIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSD 87
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 88 NYMSHDQAYLRFFayMSLFNTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFwftrpaaanaCQKAFVTNRIGDFGL 164
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 165 LLG-----IL--GFYWITGSF--EFQdLFEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEG-PTP 234
Cdd:CHL00049 169 LMGgasssILvyGFSWLYGLSggEIE-LQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 235 ISALIhAATMVAAGIFLVARLLPlfIVIPYIMN----LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALG 310
Cdd:CHL00049 248 VVAFL-SVTSKVAASALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGII 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 311 MGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAVVGyspekSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFW 390
Cdd:CHL00049 325 VGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFF 399
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2314329369 391 SKDEILSDSW---LYSPIFaiIAWSTAGLTAFYMFRIYLLTFEGH---LNIHFQKYSGKKSSSFYSIKL 453
Cdd:CHL00049 400 GKLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
202-429 |
3.07e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 94.65 E-value: 3.07e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 202 TLCASLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLG 280
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 281 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIihsmEAVVGyspekSQNMV 357
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLR 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2314329369 358 LMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL-----SDSWLyspIFAIIAWS--TAGLTAFYMFRIYLLTF 429
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
20-440 |
7.46e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 93.24 E-value: 7.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 20 ILLLSIVMIFSVDLSiqqiNGSSIYQYVWSWTINNDFSFEFGyfIDSLtSIMSILITTVGIFVLIYSDNYMSHDQAYlrF 99
Cdd:PRK07363 39 VLAWSLFLLTQFDLS----DPGMQFQEYLPWNEPLGLSYSLG--VDGL-SLPLLVLNSLLTWIAIYSIGENTERPRL--Y 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 100 FAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAAnACQKAFVTNRIGDFGLLLGILGFYWITGSFE 179
Cdd:PRK07363 110 YSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGY-ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTS 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 180 FQDLFEIFNNLIYNNEVHFLfvtlcaSLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL-LPL 258
Cdd:PRK07363 189 FDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFgLQL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 259 FiviPYIMNLIS----LIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALL 331
Cdd:PRK07363 263 F---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGtqlSLLGAVAQMISHGLILALL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 332 FLGSGSIihsmEAVVGYSPEKSQNMvLMGGLRKhAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAW 411
Cdd:PRK07363 340 FHLVGIV----ERKVGTRDLDVLNG-LMNPIRG-LPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCI 413
|
410 420
....*....|....*....|....*....
gi 2314329369 412 STAGLTAFYMFRIYLLTFEGHLNIHFQKY 440
Cdd:PRK07363 414 VASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
20-420 |
4.10e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 90.91 E-value: 4.10e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 20 ILLLSIVMIFSVDLSIQQINGSSIYqyvwSWTINNDFSFEFGyfIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYlrf 99
Cdd:PRK06473 39 LLLLSLVLAFQFDPGNPNQQFTEFI----PWIDSLGLSYHLG--VDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFY--- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 100 FAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFE 179
Cdd:PRK06473 110 YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASS 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 180 FQdlfeiFNNLIYNNEVHFLFVTLCASLLFAGAVaKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-LP 257
Cdd:PRK06473 189 FD-----YEPLRSHTLPLSTQLLLLAPILVGFGI-KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVG 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 258 LFI-VIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFL 333
Cdd:PRK06473 262 LFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFL 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 334 GSGsiihsmeavVGYSPEKSQNMVLMGGL---RKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIA 410
Cdd:PRK06473 342 LVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLC 412
|
410
....*....|
gi 2314329369 411 WSTAGLTAFY 420
Cdd:PRK06473 413 MIGTGLTAVY 422
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
64-431 |
2.67e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 88.73 E-value: 2.67e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 64 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFfAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGfwftr 143
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQVKANG-LLINLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG----- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 144 paaanaCQKA----FVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLFVTLCAslLFAGAVaksaqf 219
Cdd:PRK08042 132 ------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFG--LLAGII------ 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 220 PLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIpyimnLISLIGIITVLLGATLALAQKDIKRG 293
Cdd:PRK08042 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV-----ALLVLGMITAFVGGLYALMEHNIQRL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 294 LAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSmeavVGYspeksQNMVLM 359
Cdd:PRK08042 273 LAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 360 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEI------LSDSWLY-----SPIFAIIAWSTAGLTAFYMFRIYLLT 428
Cdd:PRK08042 344 GGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKVYGVT 423
|
...
gi 2314329369 429 FEG 431
Cdd:PRK08042 424 FLG 426
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
109-409 |
2.84e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 87.01 E-value: 2.84e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 109 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFN 188
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 189 NLIYNNEVHFLF--VTLCASLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPYI 265
Cdd:MTH00196 85 SGQSFSSVSVPIgyLLIIVALLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 266 MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY---RAALFHLITHAYSKALLFlgsgSIIhsm 342
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVF----SII--- 224
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2314329369 343 eavVGYSPEKSQnMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAII 409
Cdd:MTH00196 225 ---LALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFL 287
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
20-396 |
4.44e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 84.30 E-value: 4.44e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 20 ILLLSIVMIFSVDLsIQQINGSSIYQYVWSWTINNDFsfefgYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRF 99
Cdd:MTH00199 26 TLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGL-----LLTNSWIIISKIIIIIGSISILLMGSGETILSEGGQSS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 100 FAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFE 179
Cdd:MTH00199 100 PILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETS 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 180 FQDlfeifNNLIYNNEVHFLFVTLcaSLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarllPL 258
Cdd:MTH00199 180 IQG-----INSILTGDVGKILITI--SLLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------SI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 259 FIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY---RAALFHLITHayskALLFLGS 335
Cdd:MTH00199 240 LVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSICS 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2314329369 336 GSIIHSMEAVVGYspeksqnMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 396
Cdd:MTH00199 316 FSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
62-404 |
1.18e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 83.27 E-value: 1.18e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 62 YFIDSLtSIMSILITTVG-IFVLIYSDNYMSH-------DQAYLR-FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMC 132
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKvFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 133 SYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLlGILGFYWIT------GSFEFQDLfeifnnLIYNNEVHFLFVTLCAS 206
Cdd:PRK08676 138 SAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTEL------AAHASLLSPSVLGASFL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 207 LLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPYIMNLISLIGIITVLLGAT 282
Cdd:PRK08676 211 FIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAVAAF 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 283 LALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGsIIHSMeavvgYSPEKSQNmvlM 359
Cdd:PRK08676 290 SMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR---I 360
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2314329369 360 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSP 404
Cdd:PRK08676 361 FDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISV 405
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
99-410 |
1.63e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 82.77 E-value: 1.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 99 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPAAANacqKAFVTNRIGDFGLLLGILGFYWITG 176
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 177 SFEFqDLFEIfnnliYNNEVHFLFVTLC-ASLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV-- 252
Cdd:PRK12561 166 TFTF-DLAEL-----GAKSYPLALELLLyAGFLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmg 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 253 --------ARLLPLFIVipYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRA-----ALF 319
Cdd:PRK12561 232 gyalirfnVQMLPDAHV--YFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAML 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 320 HLITHAYSKALLFLGSGsiihsmeavVGYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEI---L 396
Cdd:PRK12561 308 QMISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgI 378
|
330
....*....|....
gi 2314329369 397 SDSWLYSPIFAIIA 410
Cdd:PRK12561 379 TSSDVYSSTFRTIT 392
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
20-392 |
3.33e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 82.02 E-value: 3.33e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 20 ILLLSIVMIFSVDLSIQQIN------------GSSIYQYVWSWTINNDFSFeFGYFI-DSLTSIMSILITTVGIFVLIYS 86
Cdd:PRK02504 20 IVILTLLGVLLVDLIGGRTAsrwlpylaiaglGAALVALALQWDNPNPISF-LGSFNaDNLSIAFRAIIALSTLVTLLMS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 87 DNYMshDQAYLRFFAYMSLFNTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFG 163
Cdd:PRK02504 99 WRYV--EQSGTPLGEFAAILLTATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAI 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 164 LLLGILGFYWITGSFefQDLFEIFNNLIYNNEVhflfvTLCASLLF--AGAVAKSAQFPLHVWLPDAMEG-PTPISALIH 240
Cdd:PRK02504 177 FLYGSSLLYGLSGGS--TQLSAIALALITSPSL-----GLALALVFviAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 241 AATMvAAGIFLVARLLPLfiVIPYIMN----LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS--- 313
Cdd:PRK02504 250 VGSK-AAGFALAIRLLVT--AFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeag 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 314 YRAALFHLITH------AYSKALLF-LGSGSiihsmEAVVGYSpeksqnmvlmgGLRKHAPITQIAFLVGTLSLCGIPPL 386
Cdd:PRK02504 327 YASMVFYLLAYlfmnlgAFACVILFsLRTGT-----DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPL 390
|
....*.
gi 2314329369 387 ACFWSK 392
Cdd:PRK02504 391 AGFFGK 396
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
62-392 |
3.57e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 78.53 E-value: 3.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 62 YFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLrFFAYMSLfnTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 141
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGL--ASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 142 TRPAAANACQKAFVTNRIGDFgLLLGILGFYWITGSFEFQDLfeifNNLIYNNEVHFLFVtLCASLLFAGAVAKSAQFPL 221
Cdd:PRK06277 145 TEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIY-GGLLLLIFGLLYGSGLPPF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 222 HVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYS 297
Cdd:PRK06277 219 HTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYH 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 298 TMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmeavvgYSPEKSQNMVLMGGLRKHAPITQIAFL 374
Cdd:PRK06277 298 AISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
330
....*....|....*...
gi 2314329369 375 VGTLSLCGIPPLACFWSK 392
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSK 386
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
50-100 |
2.51e-12 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 61.68 E-value: 2.51e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2314329369 50 WTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFF 100
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
118-422 |
1.55e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 67.25 E-value: 1.55e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 118 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfNNLIYNNEVH 197
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 198 FLFVTlcaslLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYIMNLISLIGII 275
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 276 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLgsgsiihsmEAVVGYSPEK 352
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHH 376
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 353 SQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMF 422
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
207-420 |
7.56e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 64.87 E-value: 7.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 207 LLFAGAV-------AKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF------IVIPYIMNLISLI 272
Cdd:PRK12666 208 LLEAGAAlllvvflIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagASAGFGQDWLLPG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 273 GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFL-----------GSGSI 338
Cdd:PRK12666 286 GLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRL 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 339 IHSMEAvvgYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS---------DSWLY------S 403
Cdd:PRK12666 366 AVTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllS 442
|
250
....*....|....*..
gi 2314329369 404 PIFAIIAWSTAGLTAFY 420
Cdd:PRK12666 443 GLAALIALTRAGIRLFW 459
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
198-424 |
1.41e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 64.11 E-value: 1.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 198 FLFVTLcaSLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfivipyIMNLISLIGIIT 276
Cdd:MTH00198 302 YLFITV--AILFKLAAA-----PFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIIS 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 277 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRaALFHLITHAYSKALLFLGSGSIIHSMEAVVGYSPEKSQNM 356
Cdd:MTH00198 367 LVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRD 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 357 VLMGG------------LRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDS----WLYS-PIF---AIIAWSTAGL 416
Cdd:MTH00198 446 GSFGNynlvrrlvdltiLSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCI 525
|
....*...
gi 2314329369 417 TAFYMFRI 424
Cdd:MTH00198 526 SAFYYIRI 533
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
49-334 |
1.69e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 63.93 E-value: 1.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 49 SWTINNDFSFEFGYFIDSLTSI------MSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLfntsmLGLVTSSNLIQI 122
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLL-----IGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 123 YIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfnNLIYNNEVhFLFVT 202
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI--KLPLSIQK-WLLVG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 203 LcasllFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP-YIMNLISLIGIITVLLG 280
Cdd:MTH00204 215 F-----FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAPLIVMLSVIAVIYG 289
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2314329369 281 ATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLG 334
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIA 346
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
99-428 |
1.74e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 63.96 E-value: 1.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 99 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGI-LGFYWITGS 177
Cdd:PRK02546 117 FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 178 FEFQDLfeifnnliYNNEVHFLFVTLC-ASLLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV---- 252
Cdd:PRK02546 197 FDMTAL--------AAKDFGLGFQLLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggy 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 253 ------ARLLPlfIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRA-----ALFHL 321
Cdd:PRK02546 262 allrmnAGMLP--DAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQM 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 322 ITHAYSKALLFLgsgsiihsmeaVVGYSPEKSQNMVL--MGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEI---L 396
Cdd:PRK02546 338 ISHGLIGASLFF-----------LVGATYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgF 406
|
330 340 350
....*....|....*....|....*....|..
gi 2314329369 397 SDSWLYSPIFAIIAWSTAGLTAFyMFRIYLLT 428
Cdd:PRK02546 407 ATSDAYTLPFRVVVVFLAAVGVI-LTPIYLLS 437
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
60-441 |
2.30e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 63.03 E-value: 2.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 60 FGYFIDSLTSIMSILITTVGIFVLIYSDNYMsHDQAYLRFFAYMSLFNTSMLGLV---TSSNLIQIYIFWELVGMCSYLL 136
Cdd:MTH00206 53 LYLSYDPLSSPLVILSCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 137 IGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqDLFEIFNNLIYNNEVHFLFVTLcasllfaGAVAKS 216
Cdd:MTH00206 132 ITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 217 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVA---RLLPLFIVIPYIMNLISLIGIITVLLGATLA----LAQK 288
Cdd:MTH00206 204 PLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFFIILGLWGSIMTssicLRQT 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 289 DIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLGSgsiihsmeavVGYSPEKSQNMVLMGGLRK 364
Cdd:MTH00206 277 DLKSLIAYSSVSHMSLVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQM 346
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2314329369 365 HAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIHFQKYS 441
Cdd:MTH00206 347 ILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
69-386 |
2.83e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 63.27 E-value: 2.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 69 SIMSILITTVGIFVLIYSDNYmSHDQAYLrffayMSLFNTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFWftrpa 145
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWL-----SSLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIALT----- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 146 aANACQKAFVTNRIGDFGLLLGILGFYW---ITGSFEFQdlfeifnnliynnevhFLFVTLCASLLFAGAVAKSAQFPLH 222
Cdd:PRK06459 116 -KKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNFS----------------YLPSPVPLILASFGFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 223 V--WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP--YIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 298
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 299 MSQLGYMMLALGM--------GSYR-----AALFHLITHAYSKALLFLGSGSiihsmeaVVGYSPEKSQNmvlmgglrKH 365
Cdd:PRK06459 259 IENNGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGL-------QEKQSITYSKK--------IR 323
|
330 340
....*....|....*....|.
gi 2314329369 366 APITQIAFLVGTLSLCGIPPL 386
Cdd:PRK06459 324 NRWIELGLTLLASSLSGLLPN 344
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
110-334 |
3.21e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 59.68 E-value: 3.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 110 MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnN 189
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----C 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 190 LIYNNEV-HFLFVtlcasLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYIM 266
Cdd:MTH00217 198 LKIEKELqYFIFL-----GFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFS 272
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2314329369 267 NLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLG 334
Cdd:MTH00217 273 PLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIfshTIQGLVAAIFLMLAHGLVSSALFIA 343
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
62-307 |
2.25e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 56.71 E-value: 2.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 62 YFIDSLTSIMSILITTVGIFVLIYSDN--------YMSHDQAYLrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCS 133
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 134 YLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFnnliyNNEVHFLFVTLCASLLFAGAV 213
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYL-----QEHTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 214 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLlpLFIVIPY------IMNLISLIGIITVLLGATLALAQ 287
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKF--TYIIIGYetiktaITNFIRPIALATLIIAPYFAYQA 303
|
250 260
....*....|....*....|
gi 2314329369 288 KDIKRGLAYSTMSQLGYMML 307
Cdd:PRK06591 304 KNFKNIIIYSCFTQIGYVFL 323
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
105-336 |
2.35e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 56.88 E-value: 2.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 105 LFNTSML-------GLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTnRIGDFGLLLGIL--GFYwit 175
Cdd:CHL00011 113 LFYFLMLamysgqiGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY--- 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 176 GSFEFQDLFEIFNNLIYNNEVHFLFVTlcaSLLFAGAVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA- 253
Cdd:CHL00011 189 GSNEPTLNFETLANQSYPVALEILFYI---GFLIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMg 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 254 ---------RLLP--LFIVIPYIMnlisLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RAA 317
Cdd:CHL00011 258 ayglirinmELLPhaHSIFSPWLV----IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGA 331
|
250
....*....|....*....
gi 2314329369 318 LFHLITHAYSKALLFLGSG 336
Cdd:CHL00011 332 ILQIISHGFIGAALFFLAG 350
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
198-410 |
7.93e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 54.51 E-value: 7.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 198 FLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMnlisLIGIITV 277
Cdd:MTH00144 80 LSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLSA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 278 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAVVGYSPEKSQNMV 357
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLS 235
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2314329369 358 LMGGLrkhapitqiaflvgtLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIA 410
Cdd:MTH00144 236 IISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILL 273
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
63-419 |
9.70e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 54.75 E-value: 9.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 63 FIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 142
Cdd:MTH00014 56 SSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGY 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 143 RPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqdlfeifnnLIYNNEVHFLFVT-LCASLLFAGAVAKSAQFPL 221
Cdd:MTH00014 136 QPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSM---------LMSSMEPPSIYLMnLWWLITILAFMVKMPLYTV 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 222 HVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFiviPYIMNLISLIGIITVLLGATLA----LAQKDI 290
Cdd:MTH00014 207 HLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLF---MHINKSLSAPFSSISLVGAVITslicIRQPDL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 291 KRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgsiihsMEAVVGYSPEKSQNMVLMGGLRKHAP 367
Cdd:MTH00014 277 KSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHGLCSSALF---------ALANMTYETTHTRSLFLTKGLLSLFP 347
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2314329369 368 ITQIAFLVGTLSLCGIPPLACFWSK----DEILSDSWLYSPIFAIIAWSTAGLTAF 419
Cdd:MTH00014 348 TMTMWWFLLSAANMAAPPSINLLSEimllTSILSSSLSTAILLAITSFLAAAYSLF 403
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
114-424 |
3.24e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 52.66 E-value: 3.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 114 VTSSNLIQIYIFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliyn 193
Cdd:MTH00200 21 FSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGPLS----- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 194 nevhflfvtlcASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIvipyiMNLISLIG 273
Cdd:MTH00200 95 -----------ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN-----SNILLLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 274 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmeavvgYSPEKS 353
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNS 224
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2314329369 354 QNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYS-PIFAIIAWSTAGLTAFYMFRI 424
Cdd:MTH00200 225 TKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRL 296
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
47-436 |
5.20e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 52.61 E-value: 5.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 47 VWSWTINNDFSFEFGYF-IDSLTSIMSILITTVGIFVLIYSDNYMS-----HDQAYLRFFAYMSLfntSMLGLVTSSNLI 120
Cdd:MTH00068 40 MWFNLPSETMNFTNKYFgIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYISMLIILQL---TLILAFSATELI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 121 QIYIFWELVGMCSYLLIGFWFTRPAAANACQK-AFVTnRIGDFGLLLGILGFYWITGSFEFQdLFEIFNNLIYNNEVHFL 199
Cdd:MTH00068 117 LFYIFFEATLIPTLIIITRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSLI-LLELMSPMQLMTYTNKI 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 200 FVTLCaslLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL---------VARLL-PLFIVIPYIMNL 268
Cdd:MTH00068 195 WWLAC---LLAFMV-KMPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygilrISILLtPLSKELSYPFII 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 269 ISLIGiitVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLgsgsiihsmeA 344
Cdd:MTH00068 264 LALWG---VLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCL----------A 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 345 VVGYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRI 424
Cdd:MTH00068 331 NTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYM 410
|
410
....*....|..
gi 2314329369 425 YLLTFEGHLNIH 436
Cdd:MTH00068 411 FLMTQRGPLPNH 422
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
220-389 |
9.71e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 51.36 E-value: 9.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 220 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIVIPYI-MNLISLIGIITVLLGATLALAQKDIKRGLAYST 298
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 299 MSQLGYMMLALGMgSYRAALFHLITHAYSKALLFLgsgsIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTL 378
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTT---------STKTLKDMMTSWTKSPTLNTTLMLTLL 249
|
170
....*....|.
gi 2314329369 379 SLCGIPPLACF 389
Cdd:MTH00112 250 SLAGLPPLTGF 260
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
81-438 |
2.30e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 50.72 E-value: 2.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 81 FVLIYSDNYMSHDQAYlRFFAYMSLFNTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTN 157
Cdd:MTH00127 76 LMILASQNHTAPEPIN-RQRMYITLLTSLQIFLIlafGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYT 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 158 RIGDFGLLLGILGFYWITGSFEFQDLfEIFNNLIYNNEVHFLFVTLCaslLFAGAVaKSAQFPLHVWLPDAMEGPTPISA 237
Cdd:MTH00127 155 LAGSLPLLVALLLLQNSTGTLSMLTL-QYSQPLQLSSWADKLWWAGC---LLAFLV-KMPLYGVHLWLPKAHVEAPIAGS 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 238 LIHAATMVAAGIFLVARLL----PLFIVIPYIMNLISLIGIItvlLGATLALAQKDIKRGLAYSTMSQLGYM---MLALG 310
Cdd:MTH00127 230 MVLAAVLLKLGGYGMMRMMvmldPLTKELSYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQT 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 311 MGSYRAALFHLITHAYSKALLFLgsgsiihsmEAVVGYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFW 390
Cdd:MTH00127 307 PWGFTGALILMIAHGLTSSALFC---------LANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLM 377
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2314329369 391 SKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIHFQ 438
Cdd:MTH00127 378 GELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHII 425
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
44-450 |
4.07e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 49.45 E-value: 4.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 44 YQYVWSWTINNDFsfefgYFIDSLTSIMSILITTVGIFVLIYSdnymshdQAYLRFFAYMSLFNTSMLGLV-------TS 116
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 117 SNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqdlfeIFNNLIYNNEV 196
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 197 HFLFVTLCASLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVIPYIMNLI 269
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSIF 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 270 SL-IGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgsiihsmeAV 345
Cdd:MTH00150 220 LIsLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF-----------CL 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 346 VGYSPEKSQ--NMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFR 423
Cdd:MTH00150 289 ANYTYEKVHsrSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLY 368
|
410 420
....*....|....*....|....*..
gi 2314329369 424 IYLLTFEGHLNIHFQKYSGKKSSSFYS 450
Cdd:MTH00150 369 LYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
57-362 |
1.40e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 48.05 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 57 SFEFGYFIDSLTSIMsILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSS-NLIQIYIFWELVGMCSYL 135
Cdd:MTH00205 48 FISSSFSFDSLSLPL-IMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVdNLLLFYITFEASLIPTLI 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 136 LIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNevhflfvTLCASLLFAGAVaK 215
Cdd:MTH00205 127 LILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLAFLV-K 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 216 SAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-LPLFIVIPYIMNLISLIGIITVLLGATLALAQ 287
Cdd:MTH00205 199 LPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQ 271
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2314329369 288 KDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAY-SKALLFLgsgsiihsmeAVVGYSPEKSQNMVLMGGL 362
Cdd:MTH00205 272 VDLKSLIAYSSVGHMGLMVVGVFSNTswgMNGAIIMMVAHGLcSSGMFAL----------ANVNYERTNSRSMLMNKGV 340
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
109-408 |
6.19e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 45.69 E-value: 6.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 109 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFefqDLFEIFN 188
Cdd:MTH00041 16 GTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW---SINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 189 NLiynnevhflfvtlcASLLFAGAVA-KSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYI-- 265
Cdd:MTH00041 92 TL--------------SSIIITLALAlKLGLAPCHFWFPDVLQGLPFLQGLI---------IATWQKIAPLILLISISnl 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 266 --MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSME 343
Cdd:MTH00041 149 lnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLS 228
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 344 AVvgyspeksqnmvlmGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK-----DEILSDSWLYSPIFAI 408
Cdd:MTH00041 229 HL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
183-453 |
6.52e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 45.43 E-value: 6.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 183 LFEIFNNLIYNNEVHFLFVTLcasLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVI 262
Cdd:MTH00197 63 LLLMGGSLSFSNLYLSLLSVV---LVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILA 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 263 PYIMNLISLI--GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIH 340
Cdd:MTH00197 131 FNSSSFMGLLicSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 341 SMEAVVGYSPEKSQNMVLmgglrkhapitqiaFLVGTLSLCGIPPLACFWSKDEILSD--SWLYSPIFAIIAWSTAgLTA 418
Cdd:MTH00197 211 SLNQQYSNPESMSSNLVF--------------LGLSFLSLGGLPPLSGFFLKWLILTSllSSNISLITFMLILSTC-FSL 275
|
250 260 270
....*....|....*....|....*....|....*
gi 2314329369 419 FYMFRIYLLTFeghLNIHFQKYSGKKSSSFYSIKL 453
Cdd:MTH00197 276 YYYLSLAYKSL---ILSNWMINFLMKINLLYSGLF 307
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
200-409 |
1.20e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 45.11 E-value: 1.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 200 FVTLCASLLFAGAVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVipYIMNLISLIGIITVLL 279
Cdd:PRK12664 142 YTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGIITAIY 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 280 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS-----YRAALFHLITHAYSKALLFLGSGSIIHSMEAVvgyspeksq 354
Cdd:PRK12664 215 GIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF--------- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2314329369 355 NMVLMGGLRKhAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAII 409
Cdd:PRK12664 286 NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
205-424 |
2.60e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 43.61 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 205 ASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipYIMNLISLIGIITVLLGATLA 284
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 285 LAQKDIKRGLAYSTMSQLGYMMLAlgmgsyraalfhlITHAYSKALLFLGSGSIIHS-MEAVVGYSPEKSQNMvlMGGLR 363
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMI-------------SVFSPSMAILYFMTYIIITTpLMLLFAYLNAFSTKF--NSKIS 230
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2314329369 364 KHAPITQIAFLVGTLSLCGIPPLACF---WSKDEILSDSWLYSPIFAIIAWSTAGLtaFYMFRI 424
Cdd:MTH00011 231 SMSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNL--FYYLNL 292
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
47-452 |
3.15e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 43.74 E-value: 3.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 47 VWSWTINNDFSFEFGYFI-DSLTSIMSILIttvgiFVLIYSDNYMSHDQAYLRFFAYMSLFntSMLGLVTSSNLIQIYIF 125
Cdd:MTH00094 18 FFSFLMFNNYSWSGLFFFfDSFVFVLLIFM-----MVFILGLVLLSEKNFNLLILSNLLIL--ICLLFFVSSNMLMLYMF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 126 WELVGMCSYLLIGFWFTRPAAANACQkafvtnrigdfglllgILGFYWITGSFEFqdLFEIFNNLIYNNEVHFLFVT--L 203
Cdd:MTH00094 91 FELSMFPILIMILGYGSQIEKINSSY----------------YLLFYAAFFSFPF--LFVYLKNFFFFSLCYFDFFLswE 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 204 CASLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFIVIpyIMNLISLIGIITVLLGAT 282
Cdd:MTH00094 153 MFFILSLSFMMKFPVYFLHLWLPKAhVEAPTTASMLL-AGLLLKLGTAGFLRILGSLNFV--YNNFWIIFSLLGMILSSF 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 283 LALAQKDIKRGLAYST---MSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQNMVLM 359
Cdd:MTH00094 230 CCVFQSDSKSLAAYSSvthMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHIS---------KSRLIYFM 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 360 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFaiiawstagltAFYMFRIYLLTFEGHLNIHFQK 439
Cdd:MTH00094 301 NSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFS-----------FFFIFFYFLVSFYYSLFLIVSS 369
|
410
....*....|...
gi 2314329369 440 YSGKKSSSFYSIK 452
Cdd:MTH00094 370 FMGKKFSNFNNFN 382
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
14-428 |
3.44e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 40.34 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 14 MWAFPNILLLSIVMIFSVDLSIQQINgssIYQYVWSWTINNdFSFEFGyfIDSLTSIMSILITTVGIFVLIYSDNYMSHD 93
Cdd:MTH00044 15 SWIVPKNKLWPISISQSSLISLLSLF---LLNNHWSSSWHN-LSLSLA--TDSLSSPLIILSCWLAPLSLLASINHLSNN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 94 QAYLR--FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGF 171
Cdd:MTH00044 89 SPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 172 YWITGSfefqdLFEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIF 250
Cdd:MTH00044 169 YSSSSS-----LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 251 LVARLLPLFIVIpyIMNLISLIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGMGSY---RAALFHLIT 323
Cdd:MTH00044 243 GLIRLINLFSLP--SANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLVAAGIFSGTNwgiNGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 324 HAY-SKALLFLgsgsiihsmeAVVGYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLY 402
Cdd:MTH00044 321 HGLvSSALFCL----------ANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISW 390
|
410 420
....*....|....*....|....*.
gi 2314329369 403 SPIFAIIAWSTAGLTAFYMFRIYLLT 428
Cdd:MTH00044 391 SILSFPIIGLATVFGAIYSLLIYQLT 416
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
186-313 |
3.63e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 40.19 E-value: 3.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329369 186 IFNNLIYNNEVHFLFVTLCASLLFagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYI 265
Cdd:MTH00160 76 ILNMLNLMLFNNISSMLINSSLLL-----KLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLILLSYLI 141
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2314329369 266 -MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS 313
Cdd:MTH00160 142 nNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISE 190
|
|
| |
