|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-369 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 864.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 1 VDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSM 80
Cdd:CHL00025 56 LNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSM 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 81 LGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNL 160
Cdd:CHL00025 136 LGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 161 IYNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIS 240
Cdd:CHL00025 216 IYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 241 LIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAVVGYSP 320
Cdd:CHL00025 296 LIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSP 375
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2314329385 321 EKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDS 369
Cdd:CHL00025 376 DKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDS 424
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
3-367 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 568.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 3 LSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLG 82
Cdd:PRK07376 58 LLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 83 LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIY 162
Cdd:PRK07376 138 LVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVS 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 163 NNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLI 242
Cdd:PRK07376 218 SGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWT 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 243 GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAVVGYSPEK 322
Cdd:PRK07376 298 GAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVL 377
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2314329385 323 SQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS 367
Cdd:PRK07376 378 AQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILG 422
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
10-366 |
2.33e-164 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 473.49 E-value: 2.33e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 10 GSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNL 89
Cdd:PRK06590 58 GRAFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 90 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQdlfEIFNNLIYNNEVHFL 169
Cdd:PRK06590 138 LQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD---EVFAAAPQFFGLGWS 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 170 FVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLL 249
Cdd:PRK06590 215 ALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALF 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 250 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLM 329
Cdd:PRK06590 295 AAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKM 366
|
330 340 350
....*....|....*....|....*....|....*..
gi 2314329385 330 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:PRK06590 367 GGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEIL 403
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
7-366 |
2.00e-163 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 470.79 E-value: 2.00e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 7 QINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTS 86
Cdd:COG1009 51 AVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLS 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 87 SNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIynnev 166
Cdd:COG1009 131 DNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL----- 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 167 HFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIIT 246
Cdd:COG1009 206 SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAIT 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 247 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEavvgyspekSQNM 326
Cdd:COG1009 286 ALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDI 356
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2314329385 327 VLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:COG1009 357 RKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAIL 396
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
9-366 |
1.73e-146 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 427.47 E-value: 1.73e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 9 NGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSN 88
Cdd:TIGR01974 56 EGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADN 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 89 LIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNliynneVHF 168
Cdd:TIGR01974 136 FLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPG------AFF 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 169 LFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVL 248
Cdd:TIGR01974 210 SALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITAL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 249 LGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVL 328
Cdd:TIGR01974 290 FAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRK 361
|
330 340 350
....*....|....*....|....*....|....*...
gi 2314329385 329 MGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:TIGR01974 362 MGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLIL 399
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
8-366 |
1.19e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 333.51 E-value: 1.19e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 8 INGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSS 87
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 88 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVh 167
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 168 flfvTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITV 247
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 248 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgySPEksQNMV 327
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV------SDE--QDMR 358
|
330 340 350
....*....|....*....|....*....|....*....
gi 2314329385 328 LMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLIL 397
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
8-366 |
1.70e-108 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 330.12 E-value: 1.70e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 8 INGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSS 87
Cdd:MTH00020 52 FNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 88 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNevh 167
Cdd:MTH00020 132 NYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPSSD--- 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 168 flfVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITV 247
Cdd:MTH00020 209 ---ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTV 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 248 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMV 327
Cdd:MTH00020 286 FFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL--------SDEQDMR 357
|
330 340 350
....*....|....*....|....*....|....*....
gi 2314329385 328 LMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:MTH00020 358 KMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLIL 396
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
18-366 |
2.13e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 275.29 E-value: 2.13e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 18 WSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWE 97
Cdd:MTH00211 61 WSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 98 LVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnLIYNNEVHFLFvtlcasL 177
Cdd:MTH00211 141 GVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----ILNLDLTLFLL------G 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 178 LFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQ 257
Cdd:MTH00211 210 LLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQ 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 258 KDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLMGGLRKHAP 337
Cdd:MTH00211 290 NDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLP 361
|
330 340
....*....|....*....|....*....
gi 2314329385 338 ITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:MTH00211 362 FTSSCLFLGSLALMGFPFLSGFFSKDLIL 390
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
8-366 |
2.96e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 271.83 E-value: 2.96e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 8 INGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSS 87
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 88 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDL------FEIFNNLI 161
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 162 YN---NEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNL 238
Cdd:MTH00032 212 YGggaYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 239 ISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRAALFHLITHAYSKALLFLGSGSIIHSMEAvvg 317
Cdd:MTH00032 292 ITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV--- 368
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2314329385 318 yspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:MTH00032 369 ----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
20-366 |
2.53e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 257.59 E-value: 2.53e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 20 WTINNDFSFEFGYFIDSLtsimSILITTVGIFV----LIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIF 95
Cdd:MTH00208 91 WLSNTLFNFSLSFIFDFY----FILFFSVALFVtwsiIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIG 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 96 WELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFefqDLFEIFnnLIYNNEVHFLFVTLCA 175
Cdd:MTH00208 167 WEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSW---NLNEIL--SLNNSNSFLINILLFG 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 176 SLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLAL 255
Cdd:MTH00208 242 ILL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAI 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 256 AQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLMGGLRKH 335
Cdd:MTH00208 320 SQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSL--------NNEQDLRKMGGLSFL 391
|
330 340 350
....*....|....*....|....*....|.
gi 2314329385 336 APITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:MTH00208 392 LPVTSSCIILGSLALMGTPFLAGFYSKDLIL 422
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
18-366 |
6.84e-80 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 255.86 E-value: 6.84e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 18 WSWTINNDFSFEFGYFIDSLtsimSILITTVGIFV----LIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIY 93
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQY----SLMFLPIALFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 94 IFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQdlfEIFNNLIYNnevhflfvTL 173
Cdd:MTH00004 142 IGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQ---QLFSPTQTP--------TL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 174 CASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATL 253
Cdd:MTH00004 211 PLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATC 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 254 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLMGGLR 333
Cdd:MTH00004 291 ALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQ 362
|
330 340 350
....*....|....*....|....*....|...
gi 2314329385 334 KHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:MTH00004 363 KTLPITSSCLTIGNLALMGTPFLSGFYSKDTII 395
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
18-365 |
8.20e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 255.60 E-value: 8.20e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 18 WSW-TINN---DFSFEFGYFidsltsimSILITTVGIFV----LIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNL 89
Cdd:MTH00066 64 FHWmNIFNfniNSSFKFDQY--------SIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 90 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnLIYNNEVHFL 169
Cdd:MTH00066 136 FQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 170 FvtlcaSLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLL 249
Cdd:MTH00066 211 L-----GLILA-AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLF 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 250 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLM 329
Cdd:MTH00066 285 TAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKM 356
|
330 340 350
....*....|....*....|....*....|....*.
gi 2314329385 330 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEI 365
Cdd:MTH00066 357 GGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAI 392
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
86-366 |
2.17e-79 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 245.30 E-value: 2.17e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 86 SSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNE 165
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 166 VHFLFVtlcasLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPYIMNLISLIG 243
Cdd:pfam00361 81 LLLLFL-----LILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 244 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgysp 320
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRR-------- 226
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2314329385 321 EKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLIL 272
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
16-366 |
3.65e-79 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 257.54 E-value: 3.65e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 16 YVWSWTINNDFSFefgyFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIF 95
Cdd:PRK12647 48 YAWVPSLGVNLSF----LLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 96 WELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEiFNNLIYNNEvHFLFVTLca 175
Cdd:PRK12647 124 WELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHP-LYLAILL-- 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 176 sLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLAL 255
Cdd:PRK12647 200 -LVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 256 AQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmeavVGyspekSQNMVLMGGL 332
Cdd:PRK12647 279 RQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGL 349
|
330 340 350
....*....|....*....|....*....|....
gi 2314329385 333 RKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:PRK12647 350 RRAMPITAAAALLAALSMAGLPPLFGFLAKELIY 383
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
18-365 |
2.75e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 249.00 E-value: 2.75e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 18 WSW----TINNDFSFEFGYFidsltsimSILITTVGIFV----LIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNL 89
Cdd:MTH00108 66 WHWmtiqTLKLSLSFKLDYF--------SMIFIPVALFVtwsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 90 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLiynnevhfL 169
Cdd:MTH00108 138 FQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNN--------S 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 170 FVTLcASLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLL 249
Cdd:MTH00108 210 NLPL-MGLLLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 250 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLM 329
Cdd:MTH00108 288 TAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKM 359
|
330 340 350
....*....|....*....|....*....|....*.
gi 2314329385 330 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEI 365
Cdd:MTH00108 360 GGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLI 395
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
18-366 |
2.75e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 243.97 E-value: 2.75e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 18 WSW----TINNDFSFEFGYFidsltsimSILITTVGIFV----LIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNL 89
Cdd:MTH00137 70 WNWmntlTFDINISFKFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNM 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 90 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLllgILGFYWI---TGSFEFQDLFEIFNNLIynnev 166
Cdd:MTH00137 142 FQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---ILAMAWMatnLNSWEIQQIFALSKDFD----- 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 167 hflfVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIIT 246
Cdd:MTH00137 214 ----LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALT 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 247 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNM 326
Cdd:MTH00137 290 TLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDI 361
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2314329385 327 VLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:MTH00137 362 RKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAII 401
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
30-362 |
3.68e-72 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 239.83 E-value: 3.68e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 30 FGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYL-RFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 108
Cdd:PRK12645 72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 109 FWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEifNNLIYNNEVHFLFVTLcasLLFAGAVAKSAQ 188
Cdd:PRK12645 152 YWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIA--NADEIQNSPLFIPAMI---LILLGAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 189 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 268
Cdd:PRK12645 227 FPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 269 MSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeavVGyspekSQNMVLMGGL 332
Cdd:PRK12645 307 VSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGL 377
|
330 340 350
....*....|....*....|....*....|
gi 2314329385 333 RKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK12645 378 MTIMPITFTIALIGALSMAGLPPFNGFLSK 407
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
3-361 |
2.10e-71 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 234.03 E-value: 2.10e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 3 LSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLG 82
Cdd:PRK07390 56 LALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSG 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 83 LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliy 162
Cdd:PRK07390 136 LALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAA---- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 163 NNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYIMNLISLI 242
Cdd:PRK07390 212 TANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVI 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 243 GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSmeavvgyspEK 322
Cdd:PRK07390 291 GTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TI 361
|
330 340 350
....*....|....*....|....*....|....*....
gi 2314329385 323 SQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWS 361
Cdd:PRK07390 362 TQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
26-367 |
2.55e-71 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 237.44 E-value: 2.55e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 26 FSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 105
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 106 LIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIynNEVHFLFVTLcasLLFAGAVAK 185
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAMV---LVLLGAFTK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 186 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLA 265
Cdd:TIGR00940 220 SAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 266 YSTMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeavvgyspEKSQNMVLM 329
Cdd:TIGR00940 300 FSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKL 370
|
330 340 350
....*....|....*....|....*....|....*...
gi 2314329385 330 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS 367
Cdd:TIGR00940 371 GGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFA 408
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
28-362 |
1.11e-69 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 224.64 E-value: 1.11e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 28 FEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 107
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 108 GFWFTRPAAAnACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFnnliynNEVHFLFVTLCASLLFAGAVAKSA 187
Cdd:COG0651 148 ALGGTKEALR-AGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 188 QFPLHVWLPDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLFI---VIPYIMNLISLIGIITVLLGATLALAQKDIKRG 263
Cdd:COG0651 221 LFPLHFWLPDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 264 LAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQ 340
Cdd:COG0651 300 LAYSSVSQIGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTA 370
|
330 340
....*....|....*....|..
gi 2314329385 341 IAFLVGTLSLCGIPPLACFWSK 362
Cdd:COG0651 371 AAFLIGALALAGLPPLSGFVSK 392
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
29-363 |
1.97e-69 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 232.41 E-value: 1.97e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 29 EFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 108
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 109 FWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFefqDLFEIFNN--LIYNNEVHFLFVTLCAsLLFAGAVAKS 186
Cdd:PRK12649 153 YWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTY---DIATILQDseLIENIKGHPLFLITLI-LIFIGAAAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 187 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAY 266
Cdd:PRK12649 229 AQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAY 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 267 STMSQLGYMMLALGMGSYR-------AALFHLITHAYSKALLFLGSGSIIHsmEAVvgyspekSQNMVLMGGLRKHAPIT 339
Cdd:PRK12649 309 STISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH--EAA-------TRDIRKLGGLRKEMPIT 379
|
330 340
....*....|....*....|....
gi 2314329385 340 QIAFLVGTLSLCGIPPLACFWSKD 363
Cdd:PRK12649 380 FIVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
25-362 |
6.51e-69 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 232.77 E-value: 6.51e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 25 DFSFefgyFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSY 104
Cdd:PRK12648 69 NLSL----RLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 105 LLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfNNLIYNnevHFLFV-TLCASLLfaGAV 183
Cdd:PRK12648 145 LLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAA-GDLIRA---HPLYPpALVLILL--GAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 184 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRG 263
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 264 LAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAvvgyspeKSQNMVLMGGLRKHAPITQ 340
Cdd:PRK12648 299 LAYSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITA 369
|
330 340
....*....|....*....|..
gi 2314329385 341 IAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK12648 370 TLAMVAAAAMAGVPLLNGFLSK 391
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
30-367 |
2.14e-68 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 222.54 E-value: 2.14e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 30 FGYFIDSLTSIMSILITTVGIFVLIYSDNYMS-------HDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMC 102
Cdd:PRK06525 69 FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 103 SYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYnneVHFLFVtlcaslLFAgA 182
Cdd:PRK06525 149 SWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY---LVFLGI------LFA-A 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 183 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPYIMnliSLIGIITVLLGATLALAQK 258
Cdd:PRK06525 218 WGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIqsmgPIPHVIGYVG---AVMAIVTLLYGFLMYLPQQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 259 DIKRGLAYSTMSQLGYMMLALGMGSY------RAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQNMVLMGGL 332
Cdd:PRK06525 295 DMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGV 365
|
330 340 350
....*....|....*....|....*....|....*
gi 2314329385 333 RKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS 367
Cdd:PRK06525 366 LKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFA 400
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
16-362 |
1.89e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 226.34 E-value: 1.89e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 16 YVWSW--TINNDFSFEFgyfiDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYL-RFFAYMSLFNTSMLGLVTSSNLIQI 92
Cdd:PRK12644 56 EVVPWipSLGLDLAFRL----DALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 93 YIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYnnevhflfVT 172
Cdd:PRK12644 132 YVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPTGPA--------VS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 173 LCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGAT 252
Cdd:PRK12644 204 VAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGW 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 253 LALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHL---ITHAYSKALLFLGSGSIIHSmeavVGyspekSQNMVLM 329
Cdd:PRK12644 284 RALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKL 354
|
330 340 350
....*....|....*....|....*....|...
gi 2314329385 330 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK12644 355 SGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
18-363 |
1.31e-65 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 221.94 E-value: 1.31e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 18 WSWTINNDFSFEfgyfIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYL-RFFAYMSLFNTSMLGLVTSSNLIQIYIFW 96
Cdd:PRK12646 64 WMKTLDINLDLR----LDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFW 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 97 ELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLiyNNEVHFLFVTLCas 176
Cdd:PRK12646 140 ELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFM-- 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 177 lLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALA 256
Cdd:PRK12646 216 -FLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALK 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 257 QKDIKRGLAYSTMSQLGYMMLALGMG-----------------SYRAALFHLITHAYSKALLFLGSGSIIHSmeavvgys 319
Cdd:PRK12646 295 QWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE-------- 366
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2314329385 320 pEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKD 363
Cdd:PRK12646 367 -AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
52-366 |
9.61e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 202.29 E-value: 9.61e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 52 VLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPAAANACQKAFVTNRIGD 131
Cdd:MTH00165 70 VIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGD 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 132 FGLLLGIlGFYWITGSFEFqdlfeIFNNLIYNNEVHFLFVTLcasLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHA 211
Cdd:MTH00165 149 VAILLSI-AWMMNFGSWNF-----IFYLDFMKNSFEMLLIGL---LIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHS 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 212 ATMVAAGIFLVARLLPLFIvIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHL 291
Cdd:MTH00165 220 STLVTAGVYLLIRFNNLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHL 298
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2314329385 292 ITHAYSKALLFLGSGSIIHSMEAvvgyspekSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:MTH00165 299 LTHALFKALLFLCAGSIIHNMSN--------SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLIL 365
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
4-366 |
1.45e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 193.71 E-value: 1.45e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 4 SIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGL 83
Cdd:MTH00209 20 FVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 84 VTSSNLIQIYIFWELVGMCSYLLIGFwFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWItGSFefqdlfeifnNLIYN 163
Cdd:MTH00209 100 IFVPNLITLLLGWDGLGLVSYLLVIY-YQNSKSLSAGMLTALTNRVGDALLILSIAWMLMH-GNW----------NIFYL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 164 NEVHFLFVTLCASLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIG 243
Cdd:MTH00209 168 NFNSNLGSVISVLIVLA-AMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLG 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 244 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKS 323
Cdd:MTH00209 247 SLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSH--------GHS 318
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2314329385 324 QNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:MTH00209 319 QDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL 361
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
16-366 |
2.57e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 190.44 E-value: 2.57e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 16 YVWSWTINN----DFSFEFgyFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQ 91
Cdd:MTH00151 32 LIFEWELLSvsscSFSFEL--VLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 92 IYIFWELVGMCSYLLIGFWFTRPAAANACQKAFvTNRIGDFGLLLGILGFYwITGSFefqdlfeifnNLIYNNEVHFLFV 171
Cdd:MTH00151 110 LLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV-LLGHW----------SILSMWDFKLSGW 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 172 TLCasLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGA 251
Cdd:MTH00151 178 LGL--LLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAG 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 252 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAVvgyspeksQNMVLMGG 331
Cdd:MTH00151 256 ISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGT--------QDIRLLGS 327
|
330 340 350
....*....|....*....|....*....|....*
gi 2314329385 332 LRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:MTH00151 328 LFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL 362
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
52-369 |
4.14e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 179.19 E-value: 4.14e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 52 VLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPAAANACQKAFVTNRIGD 131
Cdd:MTH00207 73 VLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGD 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 132 FGLLLGIL----GFYWITGSFEFQDlfeiFNNLIynnevhflfvTLCASLlfaGAVAKSAQFPLHVWLPDAMEGPTPISA 207
Cdd:MTH00207 152 VMLLLSIGwtlnQGHWSITNMWQTD----MNNYI----------ALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPVSA 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 208 LIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAA 287
Cdd:MTH00207 215 LVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 288 LFHLITHAYSKALLFLGSGSIIHSMeavvgyspEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS 367
Cdd:MTH00207 295 LFHLITHALFKALLFVCAGSLIHSH--------HHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
..
gi 2314329385 368 DS 369
Cdd:MTH00207 367 SS 368
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-366 |
2.28e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 181.01 E-value: 2.28e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 29 EFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 108
Cdd:PRK12650 72 NLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 109 FwfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSfefQDLFEIFNNLIYNNEVHFLFVTlcASLLFAGAVAKSAQ 188
Cdd:PRK12650 152 R--SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AVLIAVAAFTKSAQ 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 189 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 268
Cdd:PRK12650 225 FPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 269 MSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAvvgyspeKSQNMVLMGGLRKHAPITQIAFLV 345
Cdd:PRK12650 305 VSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTI 375
|
330 340
....*....|....*....|.
gi 2314329385 346 GTLSLCGIPPLACFWSKDEIL 366
Cdd:PRK12650 376 AALSMAAVPPLFGFVSKEGML 396
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-362 |
1.30e-48 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 171.31 E-value: 1.30e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 11 SSIYQYVWSWTINNDFSFEFG---------YFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSML 81
Cdd:PRK12667 48 LSILLFIQVYSSNKPIVYLFGgwpapigivYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGML 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 82 GLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLI 161
Cdd:PRK12667 128 GILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLS 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 162 YNNEVHfLFVTLCASLLFAGAVA------KSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL-------- 226
Cdd:PRK12667 208 FPLTGG-LAGNPPLALGVALALAlwaftiKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgisp 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 227 PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFL 303
Cdd:PRK12667 286 SLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFL 365
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2314329385 304 GSGSIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK12667 366 ASGVFIHAA---------GTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSK 415
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
32-362 |
7.27e-48 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 168.90 E-value: 7.27e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 32 YFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAylRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 111
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 112 TRpAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliynnEVHFLFVTLcaSLLFAGAVAKSAQFPL 191
Cdd:PRK08375 151 DR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVFPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 192 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAY 266
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 267 STMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIihsmEAVVGyspekSQNMVLMGGLRKHAPITQIAF 343
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAF 372
|
330
....*....|....*....
gi 2314329385 344 LVGTLSLCGIPPLACFWSK 362
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSK 391
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
10-361 |
1.68e-45 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 162.56 E-value: 1.68e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 10 GSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAylRFFAYMSLFNTSMLGLVTSSNL 89
Cdd:COG1008 56 GTGGFQFVESYPWIPSLGISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 90 IQIYIFWELVGMCSYLLIGFW--FTRPAAANacqKAFVTNRIGDFGLLLGILGFYWITGSFEFqDLFEIFNNLIYNNEVH 167
Cdd:COG1008 134 FLFYVFWELMLIPMYFLIGIWggERRIYAAI---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 168 FLFVtlcasLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISAlIHAATMVAAGIFLVARL-LPLF-IVIPYIMNLISLIGI 244
Cdd:COG1008 210 LLFL-----AFFIAFAVKVPMFPFHTWLPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLFpEASAYFAPLLAALGV 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 245 ITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspe 321
Cdd:COG1008 284 IGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALnplGLQGAVLQMVSHGLITAALFLLVGVLYDRT--------- 354
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2314329385 322 KSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWS 361
Cdd:COG1008 355 HTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
34-362 |
6.22e-44 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 158.72 E-value: 6.22e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 34 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 113
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 114 PAAANACQKAFVTNRIGDFGLLLGILGFYwitGSFEFQDLFEIFNNLIYNNevhFLFVTLCASLLFAGAVAKSAQFPLHV 193
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLY---GQYGTLNMAYLAVKMSENP---TVVAKIALALFIAGLAMKSGAVPVHM 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 194 WLPDAM-EGPTPISALIHAATmvAAGIFLVARLlpLFIVIPYIMNL------ISLIGIITVLLGATLALAQKDIKRGLAY 266
Cdd:PRK08376 242 WLPDAYpAAPSSISAMLLVIK--QAGLYALARV--LFSIYGPAINLatvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 267 STMSQLGYMMLALGMG---------------SYRAALFHLITHAYSKALLFLGSGSIIHsmeaVVGyspekSQNMVLMGG 331
Cdd:PRK08376 318 HSVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIY----ETG-----TRNLNELGG 388
|
330 340 350
....*....|....*....|....*....|.
gi 2314329385 332 LRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK08376 389 LARTMPKTTIAFLIGAAAIVGLPPFNGFASK 419
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
17-362 |
2.50e-42 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 153.73 E-value: 2.50e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 17 VWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTS-MLGLVTSSNLIQIYIF 95
Cdd:COG1007 51 LLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLG 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 96 WELVGMCSYLLIGFWFTRPAAANACQKAFVtnrIGDFG---LLLGILGFYWITGSFEFQDLFEIFNNLIYNNevhfLFVT 172
Cdd:COG1007 131 LELLSLSLYVLVAFRRDDRRSSEAALKYFL---LGALSsgfLLYGISLLYGATGSLNLAGIAAALAAGGANS----PLLL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 173 LCASLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPYIMNLISLIGIITVLL 249
Cdd:COG1007 204 LGLVLVLAGLAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 250 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLgsgsIIhsmeAVVGYSPEKSQNM 326
Cdd:COG1007 283 GNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEI 354
|
330 340 350
....*....|....*....|....*....|....*.
gi 2314329385 327 VLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:COG1007 355 EDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
11-362 |
1.71e-41 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 153.61 E-value: 1.71e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 11 SSIYQYVWSWTIN---------NDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLfnTSML 81
Cdd:PRK08668 35 PLLFLIKLYFTLKvgtgekltlFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 82 GLVTSSNLIQIYIFWELVGMCSYLLI--GFWFTRPAAAnacqKAFVTNRIGDFGLLLGILGFYWITGSFEFQDlfeIFNN 159
Cdd:PRK08668 113 GVFLANDLLTLYIFWEIMTFSSFMMVpmGKKESRKASL----KYFVLSAIGAYAMLYAIFLIYAKTGTFDFAD---ISQG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 160 LIynNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP--------- 227
Cdd:PRK08668 186 LI--NDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefg 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 228 LFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLG 304
Cdd:PRK08668 264 TYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLI 343
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2314329385 305 SGSIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK08668 344 FAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
34-362 |
3.84e-38 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 144.65 E-value: 3.84e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 34 IDSLTSIMSILITTVGIFVLIYSDNYMS--HDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 111
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFReyEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 112 TRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLfeifnnliynNEVHF--LFVTLCASLLFAGAVAKSAQF 189
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM----------RAAHLspFWASLVFLLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 190 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIPY----IMNLIslIGIITVLLGATLALAQKDIKRGL 264
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGwwwgVLVLA--LGAISAVLGVLYALAEHDLKRLL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 265 AYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSMEavvgyspekSQNMVLMG 330
Cdd:PRK06521 305 AYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKLG 375
|
330 340 350
....*....|....*....|....*....|..
gi 2314329385 331 GLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK06521 376 GLIRRMPWTAWAFLIGCLAISALPPLNGFVSE 407
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
16-362 |
1.06e-37 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 141.11 E-value: 1.06e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 16 YVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMShDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIF 95
Cdd:PRK05777 53 LFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 96 WELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFE-IFNNLIYNNEVHFLFVTLC 174
Cdd:PRK05777 132 LELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKaLADGSGNSLLLLFGLVFLL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 175 ASLLFagavaKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLPLFI--VIPYIMNLISLIGIITVLLGA 251
Cdd:PRK05777 212 VGLAF-----KLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGN 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 252 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKallfLGSGSIIHSMEAVVGYSPEKSQnmvl 328
Cdd:PRK05777 286 LAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD---- 357
|
330 340 350
....*....|....*....|....*....|....
gi 2314329385 329 MGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK05777 358 FAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGK 391
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
26-312 |
3.22e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 140.44 E-value: 3.22e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 26 FSFEFGYFIDSLtsIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 105
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 106 LIGF---WFTRPAAANAcqkaFVTNRIGDFGLLLgilgfywitgsfefqdlfeIFNNLIYNNEVHFLFVTLCAS---LLF 179
Cdd:MTH00095 115 LVLFynnWDSNSGAMNT----ALTNRIGDFFIFL-------------------FFSGFIFSSYYFFSFSFFSSSmilMLL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 180 AGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpYIMNLISLIGIITVLLGATLALAQKD 259
Cdd:MTH00095 172 LTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEED 250
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2314329385 260 IKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSM 312
Cdd:MTH00095 251 MKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN 303
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
35-309 |
6.12e-36 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 136.75 E-value: 6.12e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 35 DSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 114
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 115 AAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFlfvtlCASLLFAGAVAKSAQFPLHVW 194
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPSLQA-----AALLLVLAVILKTAQLPVHGW 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 195 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 274
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
250 260 270
....*....|....*....|....*....|....*
gi 2314329385 275 MMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 309
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
20-366 |
6.39e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 133.79 E-value: 6.39e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 20 WTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYL--RFFAYMSLFNTSMLGLVTSSNLIQIYIFWE 97
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSssRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 98 LVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDlfeifNNLIYNNEVHFLFvtlcasL 177
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVS-----GGLFSKNQSIILL------L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 178 LFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIM------NLISLIGIITVLLGA 251
Cdd:PRK06589 216 MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 252 TLALAQKDIKRGLAYSTMSQLGYMMLALGM---GSYRAALFHLITHAYSKALLFLGSGSIihsmeavvgYSPEKSQNMVL 328
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDK 366
|
330 340 350
....*....|....*....|....*....|....*...
gi 2314329385 329 MGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLIL 404
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
28-362 |
1.65e-34 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 134.09 E-value: 1.65e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 28 FEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSH----DQAYLrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCS 103
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHmssnERANL-LSALTALFILSMLGVVASANTFSFLFFWEIMALSS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 104 YLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLfeifnnliynnEVHFLFVTLCASLLFAGAV 183
Cdd:PRK08667 148 FFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFG 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 184 AKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKR 262
Cdd:PRK08667 217 IKAGIIPFHKWLPYAHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 263 GLAYSTMSQLGYMMLALG--------------MGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQNMVL 328
Cdd:PRK08667 297 LLAYSSIENIGIILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEK 367
|
330 340 350
....*....|....*....|....*....|....
gi 2314329385 329 MGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK08667 368 MGGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
12-359 |
3.53e-32 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 126.09 E-value: 3.53e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 12 SIYQYVWSWTINndFSFEFGyfIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAylrffAYMSLF---NTSMLGLVTSSN 88
Cdd:PRK05846 62 FVEKHPWIPRFG--ISYHLG--VDGISLLLVVLTALLTPLAVLASWEEIKKRVK-----FYMAALlwlEGGVIGVFAALD 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 89 LIQIYIFWE--LVGMcsYLLIGFW--FTRPAAANacqKAFVTNRIGDFGLLLGILGFYWI----TGSFEFQDLFeifNNL 160
Cdd:PRK05846 133 LLLFYVFFEamLIPM--YFLIGVWggKNRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLL---NLP 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 161 IYNNEVHFLFVtlcaSLLFAGAVaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIVIP-YIMNL 238
Cdd:PRK05846 205 LPPGVQYWLFL----AFFIAFAV-KMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPI 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 239 ISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSMeav 315
Cdd:PRK05846 280 IITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL--- 356
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2314329385 316 vgyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACF 359
Cdd:PRK05846 357 ------HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGF 394
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-367 |
6.81e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 125.06 E-value: 6.81e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 27 SFEFGYFIDSLTSIMSILITTVGIFVLIYSdnyMSHDQAYLrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLL 106
Cdd:PRK07234 58 NFGVTLRADALSGYFILTNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 107 IGFWFTRPAAANACQKAFVTNRIGDFgLLLGILGFYWITGSFEFQDLFEIfnnliynnevhflfVTLCASLLFAGAVAKS 186
Cdd:PRK07234 134 VAYPRTDRAIWVGLRYLFYSNVAMLF-YLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVKG 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 187 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLplfIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAY 266
Cdd:PRK07234 199 GIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAF 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 267 STMSQLGYMMLALGMGsyraALFHLiTHAYSKALLFLGSGsIIHSmeavvgYSPEKSQNMVLMGGLRkhapitqIAFLVG 346
Cdd:PRK07234 276 STISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAG-ALPS------RNFTELISQMLGIGKW-------IPLTMA 336
|
330 340
....*....|....*....|.
gi 2314329385 347 TLSLCGIPPLACFWSKDEILS 367
Cdd:PRK07234 337 SFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
33-367 |
1.64e-31 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 124.27 E-value: 1.64e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 33 FIDSLTSIMSILITTVGIFVLIYSDNYMSHDQ-------AYLRFFAYM-SLFNTSMLGLVTSSNLIQIYIFWELVGMCSY 104
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 105 LLIGFWFTRpAAANACQKAFVTNRIG-DFGLLLGILGFYWITGSFEFQDLFEIFNNLI-YNNEVHFLFVTLCASLLFAGA 182
Cdd:PRK06458 146 LLVGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 183 VAKSAQFPLHVWLPDA-MEGPTPISALihaatmvaagifLVARLLP--LFIVIPYIM------------NLISLIGIITV 247
Cdd:PRK06458 225 GTKVGLFPMHAWLPDAhSEAPSPVSAL------------LSGVLLNvaLYAVLRYYIlidaaigsdfpgRLLLIFGLLSV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 248 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQ 324
Cdd:PRK06458 293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTR 363
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2314329385 325 NMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS 367
Cdd:PRK06458 364 DINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
72-366 |
4.92e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 122.95 E-value: 4.92e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 72 YMSLFNTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRpAAANACQKAFVTNRIGDFGLLLGILGFYWITGSF 148
Cdd:PRK08377 110 YAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKTG-EAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 149 EFQDLFEIFNNLiyNNEVhflfVTLCASLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLP 227
Cdd:PRK08377 189 NMAHIAQLAGTI--DPTV----AQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILY 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 228 LFIVIP---YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALL 301
Cdd:PRK08377 262 LMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALL 341
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2314329385 302 FLGSGSIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:PRK08377 342 FLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
14-361 |
1.50e-30 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 121.59 E-value: 1.50e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 14 YQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYlrFFAYMSLFNTSMLGLVTSSNLIQIY 93
Cdd:TIGR01972 55 FQFTEDIPWIPALGISYHLGVDGISLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 94 IFWELVGMCSYLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITG-SFefqDLFEIFNNLIYNNEVHFLFVt 172
Cdd:TIGR01972 133 VFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLFL- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 173 lcasLLFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLFiviP----YIMNLISLIGIITV 247
Cdd:TIGR01972 208 ----AFFIAFAVKVPLFPLHTWLPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLF---PdaslYFAPVLAALGVIAI 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 248 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIihsmeavvgYSPEKSQ 324
Cdd:TIGR01972 281 IYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTR 351
|
330 340 350
....*....|....*....|....*....|....*..
gi 2314329385 325 NMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWS 361
Cdd:TIGR01972 352 DIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
17-362 |
1.63e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 118.51 E-value: 1.63e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 17 VWSWTINNDFSFEFgYFIDSLTSIMSILITTVGIFVLIYSDNYMShdQAYLRFFAYMSLFNTSMLG---LVTSSNLIQIY 93
Cdd:TIGR01770 52 TLQYAAYLFTGFSF-FIVDNFALLIKLILLLSTLLTFFFALSYLS--KEKINKFEFYILLLFALLGiflLVSSNDLLSIY 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 94 IFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLFVTL 173
Cdd:TIGR01770 129 LGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLLLGIVL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 174 caslLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFIVIPYIMNLISLIGIITVLLGA 251
Cdd:TIGR01770 209 ----ILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGN 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 252 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLgsgsiihSMEAVVGYSPEKSQNMVL 328
Cdd:TIGR01770 285 FGALAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAFG-------VLSLLRSYKDEWIEYISD 357
|
330 340 350
....*....|....*....|....*....|....
gi 2314329385 329 MGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:TIGR01770 358 FAGLFKTNPILAILILIFMFSLAGIPPLAGFFGK 391
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
34-331 |
8.30e-29 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 116.67 E-value: 8.30e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 34 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSlFNTSMLGLVTSSNLIQIY-IFWELVGMCSYLLIGFWFT 112
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFT-FTTGFASLAWLSGDLRLMaLCWGATLLGLTLLIGLNKG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 113 RPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEfqdlfeIFNNLIYNNEVHF-LFVTLCASLLFAGAV-AKSAQFP 190
Cdd:PRK08601 149 WKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQ------LTSVLSNENLAQLgTWEKTGINLLLILAVmIPAAQWP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 191 LHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPYIMNLIslIGIITVLLGATLALAQKDIKRGLAYSTM 269
Cdd:PRK08601 223 FQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVGSTM 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2314329385 270 SQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaVVGYSPEKSQNMVLMGG 331
Cdd:PRK08601 300 AQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
34-367 |
2.05e-28 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 116.15 E-value: 2.05e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 34 IDSLTSIMSILITTVGIFVLIYSdnymSHDQAYLRFFAYMSLFNTSmLGLVTSSNLIQIYIFWELVGMCSYLLIgfWFTR 113
Cdd:PRK12668 65 VDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTSTFLV--WARG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 114 -PAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqDLFEIFNnliynnevhflfvTLCASLLFAGAVAKSAQFPLH 192
Cdd:PRK12668 138 tKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPLH 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 193 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYImnlisliGIITVLLGATLALAQKDIKRGLAYSTMSQL 272
Cdd:PRK12668 204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYI-------GAAMAVYGVFFALLENDLRRLLSYHIVSQV 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 273 GYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHsmeaVVGYSpeksqNMVLMGGLRKHAPITQIAFLVGTLS 349
Cdd:PRK12668 277 GYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLY----RTGTE-----KLTELGGLYRSMPLTALFCLVGALS 347
|
330
....*....|....*...
gi 2314329385 350 LCGIPPLACFWSKDEILS 367
Cdd:PRK12668 348 ISAFPLFSGFVSKSMIIS 365
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
18-367 |
2.78e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 103.80 E-value: 2.78e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 18 WSWTIN----NDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIY 93
Cdd:MTH00063 23 SSVSLNflsfGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 94 IFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnliynnevhFLFVTL 173
Cdd:MTH00063 103 IFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFLCCLF-------------FFLIVF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 174 casllfagavAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPLFIVIPYIMNLISLIGIITVLLGATL 253
Cdd:MTH00063 169 ----------TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDYLLGFSWLSIFFSVLLLLTIFITGVS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 254 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIhsmeavVGYSPEKSQNMVLMGGLR 333
Cdd:MTH00063 238 SLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVM------SGSGGSQSSNCVYSSILY 311
|
330 340 350
....*....|....*....|....*....|....
gi 2314329385 334 KHAPITQIAFLVgtLSLCGIPPLACFWSKDEILS 367
Cdd:MTH00063 312 GSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLS 343
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
35-362 |
3.73e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 103.49 E-value: 3.73e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 35 DSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 114
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 115 AAANACqKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVhflFVTLCASLLFAGAVAKSAQFPLHVW 194
Cdd:PRK07691 156 QLRESI-KYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 195 LPDAMEGP-TPISALIhAATMVAAGIFLVARLLPLFIV--IPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 271
Cdd:PRK07691 232 LPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIA 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 272 LGYMMLALGMG---SYRAALFHLITHAYSKALLFLgsgsIIHSMEAVVGYSPEKSqnmvlMGGLRKHAPITQIAFLVGTL 348
Cdd:PRK07691 311 VGVILVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAAL 381
|
330
....*....|....
gi 2314329385 349 SLCGIPPLACFWSK 362
Cdd:PRK07691 382 SLAGIPPLSGFYGK 395
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
34-367 |
1.65e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 101.35 E-value: 1.65e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 34 IDSLTSIMSILITTVGIFVLIYSdNYMSHDQ----AYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 109
Cdd:PRK12662 74 VDILSATMLVLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 110 WFTRPAAANACQkAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHF--LFVTLcasllfaGAVAKSA 187
Cdd:PRK12662 153 GRDKKALVAAFE-YLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIgvLFIMV-------GLFIKAA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 188 QFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVIPYIMNLISLIGIITVLLGATLALAQKDI 260
Cdd:PRK12662 225 LFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 261 KRGLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMEavvgyspekSQNMVLMGGLRKHAP 337
Cdd:PRK12662 304 KRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMP 374
|
330 340 350
....*....|....*....|....*....|
gi 2314329385 338 ITQIAFLVGTLSLCGIPPLACFWSKDEILS 367
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYILD 404
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
35-362 |
4.47e-23 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 100.02 E-value: 4.47e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 35 DSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 114
Cdd:PRK12663 76 DSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQERE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 115 AAANACQKAFVtNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVhflfvTLCASLLFAGAVAKSAQFPLHvW 194
Cdd:PRK12663 156 QLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL-----TTIALLFLLAFGMKAALFPFM-W 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 195 LPDAMEGPTPISALIHAATMVAAGIFLVARLLP-LFIVIPYIMN-LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQL 272
Cdd:PRK12663 229 LPAAYHTPNTEVAALFAALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQVISSI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 273 GYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIhsmeAVVGYSPEKSqnmvlMGGLRKHAPITQIAFLVGTLS 349
Cdd:PRK12663 309 GFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLILIFA 379
|
330
....*....|...
gi 2314329385 350 LCGIPPLACFWSK 362
Cdd:PRK12663 380 IGGLPPFSGFWGK 392
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
12-362 |
1.24e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 90.06 E-value: 1.24e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 12 SIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFayMSLFNTSMLG---LVTSSN 88
Cdd:CHL00049 55 SITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEF--LLFVLTATLGgmfLCGAND 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 89 LIQIYIFWELVGMCSYLLIGFwftrpaaanaCQKAFVTNRIGDFGLLLG-----IL--GFYWITGSF--EFQdLFEIFNN 159
Cdd:CHL00049 133 LITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYLLMGgasssILvyGFSWLYGLSggEIE-LQEIVNG 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 160 LIYNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPlfIVIPYIMN- 237
Cdd:CHL00049 202 LINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFD--IPFYFSSNe 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 238 ---LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEA 314
Cdd:CHL00049 279 whlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGL 358
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2314329385 315 VVGyspekSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:CHL00049 359 RTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
172-362 |
3.08e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 88.87 E-value: 3.08e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 172 TLCASLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLG 250
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 251 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIihsmEAVVGyspekSQNMV 327
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLR 358
|
170 180 190
....*....|....*....|....*....|....*
gi 2314329385 328 LMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
79-367 |
8.03e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 83.54 E-value: 8.03e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 79 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFN 158
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 159 NLIYNNEVHFLF--VTLCASLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPYI 235
Cdd:MTH00196 85 SGQSFSSVSVPIgyLLIIVALLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 236 MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY---RAALFHLITHAYSKALLFLgsgsiihsm 312
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2314329385 313 eAVVGYSPEKSQnMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS 367
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILL 275
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
34-359 |
3.80e-17 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 82.45 E-value: 3.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 34 IDSLtSIMSILITTVGIFVLIYSDNYMSHDQAYlrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 113
Cdd:PRK07363 77 VDGL-SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 114 PAAAnACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLfvtlcaSLLFAGAVAKSAQFPLHV 193
Cdd:PRK07363 154 KRGY-ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 194 WLPDAMEGPTPISALIHAATMVAAGIFLVARL-LPLFiviPYIMNLIS----LIGIITVLLGATLALAQKDIKRGLAYST 268
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 269 MSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmEAVVGYSPEKSQNMvLMGGLRKhAPITQIAFLV 345
Cdd:PRK07363 304 IGHMGYILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVGTRDLDVLNG-LMNPIRG-LPLTSALLVL 377
|
330
....*....|....
gi 2314329385 346 GTLSLCGIPPLACF 359
Cdd:PRK07363 378 AGMASAGIPGLVGF 391
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
69-359 |
8.66e-17 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 81.28 E-value: 8.66e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 69 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSF 148
Cdd:PRK06473 109 YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGAS 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 149 EFQdlfeiFNNLIYNNEVHFLFVTLCASLLFAGAVaKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-L 226
Cdd:PRK06473 188 SFD-----YEPLRSHTLPLSTQLLLLAPILVGFGI-KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgV 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 227 PLFI-VIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLF 302
Cdd:PRK06473 261 GLFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLF 340
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 303 LGSGsiihsmeavVGYSPEKSQNMVLMGGL---RKHAPITQIAFLVGTLSLCGIPPLACF 359
Cdd:PRK06473 341 LLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGF 391
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
34-359 |
2.65e-16 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 80.26 E-value: 2.65e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 34 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFfAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGfwftr 113
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQVKANG-LLINLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG----- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 114 paAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLFVTLCAslLFAGAVaksaqfPLHV 193
Cdd:PRK08042 132 --NSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFG--LLAGII------PLHG 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 194 WLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIpyimnLISLIGIITVLLGATLALAQKDIKRGLAYS 267
Cdd:PRK08042 202 WVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV-----ALLVLGMITAFVGGLYALMEHNIQRLLAYH 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 268 TMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQNMVLMGGLR 333
Cdd:PRK08042 277 TLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRT---------GHRDIEKLGGIG 347
|
330 340
....*....|....*....|....*.
gi 2314329385 334 KHAPITQIAFLVGTLSLCGIPPLACF 359
Cdd:PRK08042 348 KKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
34-366 |
5.48e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 78.91 E-value: 5.48e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 34 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 113
Cdd:MTH00199 64 TNSWIIISKIIIIIGSISILLMGSGETILSEGGQSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 114 PAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDlfeifNNLIYNNEVHFLFVTLcaSLLFAGAVAksaqfPLHV 193
Cdd:MTH00199 144 AYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQG-----INSILTGDVGKILITI--SLLFKLSAA-----PFHM 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 194 WLPDAMEG-PTPISALIhaATMVAAGIFlvarllPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQL 272
Cdd:MTH00199 212 WAPDVYEGaPTITTALL--ATVPKIGVF------SILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHM 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 273 GYMMLALGMGSY---RAALFHLITHayskALLFLGSGSIIHSMEAVVGYspeksqnMVLMGGLRKHAPITQIAFLVGTLS 349
Cdd:MTH00199 284 GFILFGVAIGSFesiQASLIYMIIY----VIMSICSFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLS 352
|
330
....*....|....*..
gi 2314329385 350 LCGIPPLACFWSKDEIL 366
Cdd:MTH00199 353 IAGIPPLAGFLSKWLIL 369
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
32-366 |
6.13e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 79.03 E-value: 6.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 32 YFIDSLtSIMSILITTVG-IFVLIYSDNYMSH-------DQAYLR-FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMC 102
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKvFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 103 SYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLlGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLFVTLCASLLFAGA 182
Cdd:PRK08676 138 SAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTRQALGTGTLNWTELAAHASLLSPSVLGASFLFIFIGF 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 183 VAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPYIMNLISLIGIITVLLGATLALAQK 258
Cdd:PRK08676 217 LAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAVAAFSMLSQR 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 259 DIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGsIIHSMeavvgyspEKSQNMVLMGGLRKH 335
Cdd:PRK08676 296 NLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ--------YRSDRFDRIFDVFRL 366
|
330 340 350
....*....|....*....|....*....|.
gi 2314329385 336 APITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:PRK08676 367 QPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
10-362 |
3.51e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 76.63 E-value: 3.51e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 10 GSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMshDQAYLRFFAYMSLFNTSMLG---LVTS 86
Cdd:PRK02504 52 GAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYV--EQSGTPLGEFAAILLTATLGgmfLSGA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 87 SNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFefQDLFEIFNNLIYNNEV 166
Cdd:PRK02504 130 TELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGS--TQLSAIALALITSPSL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 167 hflfvTLCASLLF--AGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiVIPYIMN----LI 239
Cdd:PRK02504 208 -----GLALALVFviAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFDEqwklLF 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 240 SLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITH------AYSKALLF-LGSGSii 309
Cdd:PRK02504 280 TALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT-- 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2314329385 310 hsmEAVVGYSpeksqnmvlmgGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:PRK02504 358 ---DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
69-361 |
4.47e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 76.22 E-value: 4.47e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 69 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPAAANacqKAFVTNRIGDFGLLLGILGFYWITG 146
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 147 SFEFqDLFEIfnnliYNNEVHFLFVTLC-ASLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV-- 222
Cdd:PRK12561 166 TFTF-DLAEL-----GAKSYPLALELLLyAGFLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmg 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 223 --------ARLLPLFIVipYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRA-----ALF 289
Cdd:PRK12561 232 gyalirfnVQMLPDAHV--YFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAML 307
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2314329385 290 HLITHAYSKALLFLGSGsiihsmeavVGYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWS 361
Cdd:PRK12561 308 QMISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
32-362 |
9.49e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 75.07 E-value: 9.49e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 32 YFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLrFFAYMSLfnTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 111
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGL--ASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 112 TRPAAANACQKAFVTNRIGDFgLLLGILGFYWITGSFEFQDLfeifNNLIYNNEVHFLFVtLCASLLFAGAVAKSAQFPL 191
Cdd:PRK06277 145 TEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIY-GGLLLLIFGLLYGSGLPPF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 192 HVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYS 267
Cdd:PRK06277 219 HTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYH 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 268 TMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmeavvgYSPEKSQNMVLMGGLRKHAPITQIAFL 344
Cdd:PRK06277 298 AISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
330
....*....|....*...
gi 2314329385 345 VGTLSLCGIPPLACFWSK 362
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSK 386
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
20-70 |
3.50e-12 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 60.52 E-value: 3.50e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2314329385 20 WTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFF 70
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
19-304 |
1.07e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 62.77 E-value: 1.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 19 SWTINNDFSFEFGYFIDSLTSI------MSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLfntsmLGLVTSSNLIQI 92
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLL-----IGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 93 YIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfnnLIYNNEVHFLFVT 172
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI---KLPLSIQKWLLVG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 173 LcasllFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP-YIMNLISLIGIITVLLG 250
Cdd:MTH00204 215 F-----FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAPLIVMLSVIAVIYG 289
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2314329385 251 ATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLG 304
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIA 346
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
168-369 |
4.14e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 61.03 E-value: 4.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 168 FLFVTLcaSLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfivipyIMNLISLIGIIT 246
Cdd:MTH00198 302 YLFITV--AILFKLAAA-----PFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIIS 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 247 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRaALFHLITHAYSKALLFLGSGSIIHSMEAVVGYSPEKSQNM 326
Cdd:MTH00198 367 LVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRD 445
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2314329385 327 VLMGG------------LRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILSDS 369
Cdd:MTH00198 446 GSFGNynlvrrlvdltiLSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGS 500
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
39-308 |
7.65e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 60.19 E-value: 7.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 39 SIMSILITTVGIFVLIYSDNYmSHDQAYLrffayMSLFNTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFWftrpa 115
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWL-----SSLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIALT----- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 116 aANACQKAFVTNRIGDFGLLLGILGFYW---ITGSFEFQdlfeifnnliynnevhFLFVTLCASLLFAGAVAKSAQFPLH 192
Cdd:PRK06459 116 -KKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNFS----------------YLPSPVPLILASFGFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 193 V--WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP--YIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 268
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2314329385 269 MSQLGYMMLALGM--------GSYR-----AALFHLITHAYSKALLFLGSGSI 308
Cdd:PRK06459 259 IENNGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
69-359 |
9.08e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 60.11 E-value: 9.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 69 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGI-LGFYWITGS 147
Cdd:PRK02546 117 FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 148 FEFQDLfeifnnliYNNEVHFLFVTLC-ASLLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV---- 222
Cdd:PRK02546 197 FDMTAL--------AAKDFGLGFQLLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggy 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 223 ------ARLLPlfIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRA-----ALFHL 291
Cdd:PRK02546 262 allrmnAGMLP--DAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQM 337
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 292 ITHAYSKALLFLgsgsiihsmeaVVGYSPEKSQNMVL--MGGLRKHAPITQIAFLVGTLSLCGIPPLACF 359
Cdd:PRK02546 338 ISHGLIGASLFF-----------LVGATYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGF 396
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
88-303 |
1.94e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 58.78 E-value: 1.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 88 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfNNLIYNNEVH 167
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 168 FLFVTlcaslLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYIMNLISLIGII 245
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2314329385 246 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFL 303
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI 366
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
80-304 |
2.61e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 58.52 E-value: 2.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 80 MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnN 159
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----C 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 160 LIYNNEV-HFLFVtlcasLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYIM 236
Cdd:MTH00217 198 LKIEKELqYFIFL-----GFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFS 272
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2314329385 237 NLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLG 304
Cdd:MTH00217 273 PLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIfshTIQGLVAAIFLMLAHGLVSSALFIA 343
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-367 |
2.74e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 58.32 E-value: 2.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 177 LLFAGAV-------AKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF------IVIPYIMNLISLI 242
Cdd:PRK12666 208 LLEAGAAlllvvflIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagASAGFGQDWLLPG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 243 GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFL-----------GSGSI 308
Cdd:PRK12666 286 GLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRL 365
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2314329385 309 IHSMEAvvgYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSKDEILS 367
Cdd:PRK12666 366 AVTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQ 421
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
32-277 |
1.41e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 55.94 E-value: 1.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 32 YFIDSLTSIMSILITTVGIFVLIYSDN--------YMSHDQAYLrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCS 103
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 104 YLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFnnliyNNEVHFLFVTLCASLLFAGAV 183
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYL-----QEHTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 184 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLlpLFIVIPY------IMNLISLIGIITVLLGATLALAQ 257
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKF--TYIIIGYetiktaITNFIRPIALATLIIAPYFAYQA 303
|
250 260
....*....|....*....|
gi 2314329385 258 KDIKRGLAYSTMSQLGYMML 277
Cdd:PRK06591 304 KNFKNIIIYSCFTQIGYVFL 323
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
75-306 |
1.89e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 55.72 E-value: 1.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 75 LFNTSML-------GLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTnRIGDFGLLLGIL--GFYwit 145
Cdd:CHL00011 113 LFYFLMLamysgqiGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY--- 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 146 GSFEFQDLFEIFNNLIYNNEVHFLFVTlcaSLLFAGAVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA- 223
Cdd:CHL00011 189 GSNEPTLNFETLANQSYPVALEILFYI---GFLIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMg 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 224 ---------RLLP--LFIVIPYIMnlisLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RAA 287
Cdd:CHL00011 258 ayglirinmELLPhaHSIFSPWLV----IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGA 331
|
250
....*....|....*....
gi 2314329385 288 LFHLITHAYSKALLFLGSG 306
Cdd:CHL00011 332 ILQIISHGFIGAALFFLAG 350
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
30-361 |
1.17e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 53.40 E-value: 1.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 30 FGYFIDSLTSIMSILITTVGIFVLIYSDNYMsHDQAYLRFFAYMSLFNTSMLGLV---TSSNLIQIYIFWELVGMCSYLL 106
Cdd:MTH00206 53 LYLSYDPLSSPLVILSCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 107 IGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqDLFEIFNNLIYNNEVHFLFVTLcasllfaGAVAKS 186
Cdd:MTH00206 132 ITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 187 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVA---RLLPLFIVIPYIMNLISLIGIITVLLGATLA----LAQK 258
Cdd:MTH00206 204 PLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFFIILGLWGSIMTssicLRQT 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 259 DIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLGSgsiihsmeavVGYSPEKSQNMVLMGGLRK 334
Cdd:MTH00206 277 DLKSLIAYSSVSHMSLVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQM 346
|
330 340
....*....|....*....|....*..
gi 2314329385 335 HAPITQIAFLVGTLSLCGIPPLACFWS 361
Cdd:MTH00206 347 ILPLLSFWWLLFFLANLGLPPFPNLFG 373
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
33-302 |
3.53e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 51.66 E-value: 3.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 33 FIDSLTSIMSILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 112
Cdd:MTH00014 56 SSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGY 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 113 RPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqdlfeifnnLIYNNEVHFLFVT-LCASLLFAGAVAKSAQFPL 191
Cdd:MTH00014 136 QPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSM---------LMSSMEPPSIYLMnLWWLITILAFMVKMPLYTV 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 192 HVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVI-PYIMNLISLIGIITVLLGATLALAQKDIKRG 263
Cdd:MTH00014 207 HLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLFMHInKSLSAPFSSISLVGAVITSLICIRQPDLKSL 279
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2314329385 264 LAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLF 302
Cdd:MTH00014 280 IAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHGLCSSALF 321
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
190-359 |
8.32e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 50.21 E-value: 8.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 190 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIVIPYI-MNLISLIGIITVLLGATLALAQKDIKRGLAYST 268
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 269 MSQLGYMMLALGMgSYRAALFHLITHAYSKALLFLgsgsIIHSMeavvgyspeKSQNMVLMGGLRKHAPITQIAFLVGTL 348
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTT---------STKTLKDMMTSWTKSPTLNTTLMLTLL 249
|
170
....*....|.
gi 2314329385 349 SLCGIPPLACF 359
Cdd:MTH00112 250 SLAGLPPLTGF 260
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
168-362 |
1.55e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 49.50 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 168 FLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMnlisLIGIITV 247
Cdd:MTH00144 80 LSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLSA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 248 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAVVGYSPEKSQNMV 327
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLS 235
|
170 180 190
....*....|....*....|....*....|....*
gi 2314329385 328 LMGGLrkhapitqiaflvgtLSLCGIPPLACFWSK 362
Cdd:MTH00144 236 IISLL---------------LSLGGLPPFLGFCSK 255
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
84-362 |
5.58e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 47.66 E-value: 5.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 84 VTSSNLIQIYIFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliyn 163
Cdd:MTH00200 21 FSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGPLS----- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 164 nevhflfvtlcASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIvipyiMNLISLIG 243
Cdd:MTH00200 95 -----------ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN-----SNILLLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 244 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmeavvgYSPEKS 323
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNS 224
|
250 260 270
....*....|....*....|....*....|....*....
gi 2314329385 324 QNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:MTH00200 225 TKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPK 263
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
27-332 |
2.57e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 45.74 E-value: 2.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 27 SFEFGYFIDSLTSIMsILITTVGIFVLIYSDNYMSHDQAYLRFFAYMSLFNTSMLGLVTSS-NLIQIYIFWELVGMCSYL 105
Cdd:MTH00205 48 FISSSFSFDSLSLPL-IMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVdNLLLFYITFEASLIPTLI 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 106 LIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNevhflfvTLCASLLFAGAVaK 185
Cdd:MTH00205 127 LILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLAFLV-K 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 186 SAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-LPLFIVIPYIMNLISLIGIITVLLGATLALAQ 257
Cdd:MTH00205 199 LPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQ 271
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2314329385 258 KDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAY-SKALLFLgsgsiihsmeAVVGYSPEKSQNMVLMGGL 332
Cdd:MTH00205 272 VDLKSLIAYSSVGHMGLMVVGVFSNTswgMNGAIIMMVAHGLcSSGMFAL----------ANVNYERTNSRSMLMNKGV 340
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
79-362 |
9.95e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 43.77 E-value: 9.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 79 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFefqDLFEIFN 158
Cdd:MTH00041 16 GTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW---SINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 159 NLiynnevhflfvtlcASLLFAGAVA-KSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYI-- 235
Cdd:MTH00041 92 TL--------------SSIIITLALAlKLGLAPCHFWFPDVLQGLPFLQGLI---------IATWQKIAPLILLISISnl 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 236 --MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSME 313
Cdd:MTH00041 149 lnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLS 228
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2314329385 314 AVvgyspeksqnmvlmGGLRKHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:MTH00041 229 HL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNK 263
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
170-366 |
2.73e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 42.80 E-value: 2.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 170 FVTLCASLLFAGAVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVipYIMNLISLIGIITVLL 249
Cdd:PRK12664 142 YTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGIITAIY 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 250 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS-----YRAALFHLITHAYSKALLFLGSGSIIHSMEAVvgyspeksq 324
Cdd:PRK12664 215 GIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF--------- 285
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2314329385 325 NMVLMGGLRKhAPITQIAFLVGTLSLCGIPPLACFWSKDEIL 366
Cdd:PRK12664 286 NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLIT 326
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
17-361 |
2.77e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 42.60 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 17 VWSWTINNDFSFEFGYF-IDSLTSIMSILITTVGIFVLIYSDNYMS-----HDQAYLRFFAYMSLfntSMLGLVTSSNLI 90
Cdd:MTH00068 40 MWFNLPSETMNFTNKYFgIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYISMLIILQL---TLILAFSATELI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 91 QIYIFWELVGMCSYLLIGFWFTRPAAANACQK-AFVTnRIGDFGLLLGILGFYWITGSFEFQdLFEIFNNLIYNNEVHFL 169
Cdd:MTH00068 117 LFYIFFEATLIPTLIIITRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSLI-LLELMSPMQLMTYTNKI 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 170 FVTLCaslLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL---------VARLL-PLFIVIPYIMNL 238
Cdd:MTH00068 195 WWLAC---LLAFMV-KMPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygilrISILLtPLSKELSYPFII 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 239 ISLIGiitVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLgsgsiihsmeA 314
Cdd:MTH00068 264 LALWG---VLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCL----------A 330
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2314329385 315 VVGYSPEKSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPLACFWS 361
Cdd:MTH00068 331 NTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWG 377
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
170-367 |
3.99e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 41.97 E-value: 3.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 170 FVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYIMNLISLI--GIITV 247
Cdd:MTH00197 77 LSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSVLSS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 248 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAVVGYSPEKSQNMV 327
Cdd:MTH00197 148 LIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLV 227
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2314329385 328 LmgglrkhapitqiaFLVGTLSLCGIPPLACFWSKDEILS 367
Cdd:MTH00197 228 F--------------LGLSFLSLGGLPPLSGFFLKWLILT 253
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
175-362 |
5.67e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.30 E-value: 5.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 175 ASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipYIMNLISLIGIITVLLGATLA 254
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 255 LAQKDIKRGLAYSTMSQLGYMMLAlgmgsyraalfhlITHAYSKALLFLGSGSIIHS-MEAVVGYSPEKSQNMvlMGGLR 333
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMI-------------SVFSPSMAILYFMTYIIITTpLMLLFAYLNAFSTKF--NSKIS 230
|
170 180
....*....|....*....|....*....
gi 2314329385 334 KHAPITQIAFLVGTLSLCGIPPLACFWSK 362
Cdd:MTH00011 231 SMSQTTSMSLFIMLLSLGGLPPFTGFMPK 259
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
14-332 |
1.11e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 40.59 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 14 YQYVWSWTINNDFsfefgYFIDSLTSIMSILITTVGIFVLIYSdnymshdQAYLRFFAYMSLFNTSMLGLV-------TS 86
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 87 SNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqdlfeIFNNLIYNNEV 166
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 167 HFLFVTLCASLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVIPYIMNLI 239
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSIF 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 240 SL-IGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgsiihsmeAV 315
Cdd:MTH00150 220 LIsLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF-----------CL 288
|
330
....*....|....*....
gi 2314329385 316 VGYSPEKSQ--NMVLMGGL 332
Cdd:MTH00150 289 ANYTYEKVHsrSLFLSKGM 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
156-283 |
1.52e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 40.19 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 156 IFNNLIYNNEVHFLFVTLCASLLFagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYI 235
Cdd:MTH00160 76 ILNMLNLMLFNNISSMLINSSLLL-----KLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLILLSYLI 141
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2314329385 236 -MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS 283
Cdd:MTH00160 142 nNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISE 190
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
17-361 |
1.85e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 39.89 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 17 VWSWTINNDFSFEFGYFI-DSLTSIMSILIttvgiFVLIYSDNYMSHDQAYLRFFAYMSLFntSMLGLVTSSNLIQIYIF 95
Cdd:MTH00094 18 FFSFLMFNNYSWSGLFFFfDSFVFVLLIFM-----MVFILGLVLLSEKNFNLLILSNLLIL--ICLLFFVSSNMLMLYMF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 96 WELVGMCSYLLIGFWFTRPAAANACQkafvtnrigdfglllgILGFYWITGSFEFqdLFEIFNNLIYNNEVHFLFVT--L 173
Cdd:MTH00094 91 FELSMFPILIMILGYGSQIEKINSSY----------------YLLFYAAFFSFPF--LFVYLKNFFFFSLCYFDFFLswE 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 174 CASLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFIVIpyIMNLISLIGIITVLLGAT 252
Cdd:MTH00094 153 MFFILSLSFMMKFPVYFLHLWLPKAhVEAPTTASMLL-AGLLLKLGTAGFLRILGSLNFV--YNNFWIIFSLLGMILSSF 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 253 LALAQKDIKRGLAYST---MSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeavvgyspeKSQNMVLM 329
Cdd:MTH00094 230 CCVFQSDSKSLAAYSSvthMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHIS---------KSRLIYFM 300
|
330 340 350
....*....|....*....|....*....|..
gi 2314329385 330 GGLRKHAPITQIAFLVGTLSLCGIPPLACFWS 361
Cdd:MTH00094 301 NSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFS 332
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
89-356 |
2.55e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 39.55 E-value: 2.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 89 LIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLfEIFNNLIYNNEVHF 168
Cdd:MTH00127 116 IIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTL-QYSQPLQLSSWADK 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 169 LFVTLCaslLFAGAVaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPYIMNLISLIGI 244
Cdd:MTH00127 195 LWWAGC---LLAFLV-KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMvmldPLTKELSYPFIILALWGI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2314329385 245 ItvlLGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRAALFHLITHAYSKALLFlgsgsiihsMEAVVGYSPE 321
Cdd:MTH00127 271 I---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALF---------CLANTNYERT 338
|
250 260 270
....*....|....*....|....*....|....*
gi 2314329385 322 KSQNMVLMGGLRKHAPITQIAFLVGTLSLCGIPPL 356
Cdd:MTH00127 339 HSRTMLLARGLQMILPLMATWWFIASLANLALPPL 373
|
|
| |
