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Conserved domains on  [gi|2328704489|gb|UZM28742|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Gongolaria sp. 2]

Protein Classification

similar to NADH dehydrogenase I subunit H( domain architecture ID 10002943)

protein similar to NADH dehydrogenase I subunit H

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-254 1.11e-115

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


:

Pssm-ID: 440629  Cd Length: 329  Bit Score: 334.41  E-value: 1.11e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   1 AGIQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFL 80
Cdd:COG1005    38 ARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGLVLADLNVGLLYVL 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  81 AVSSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMS-IWLIFPLLPVSVMF 159
Cdd:COG1005   118 AVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGgLWFILPQPLAFVVF 197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 160 FIGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGIGIFSD---GIWFG 236
Cdd:COG1005   198 FIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPILPLGGlpgILWFL 277

                         250
                  ....*....|....*...
gi 2328704489 237 LKICFFVILFVVMRAILP 254
Cdd:COG1005   278 LKTLFFIFFFIWVRATLP 295
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-254 1.11e-115

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 334.41  E-value: 1.11e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   1 AGIQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFL 80
Cdd:COG1005    38 ARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGLVLADLNVGLLYVL 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  81 AVSSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMS-IWLIFPLLPVSVMF 159
Cdd:COG1005   118 AVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGgLWFILPQPLAFVVF 197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 160 FIGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGIGIFSD---GIWFG 236
Cdd:COG1005   198 FIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPILPLGGlpgILWFL 277

                         250
                  ....*....|....*...
gi 2328704489 237 LKICFFVILFVVMRAILP 254
Cdd:COG1005   278 LKTLFFIFFFIWVRATLP 295
NADHdh pfam00146
NADH dehydrogenase;
1-254 1.18e-112

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 325.58  E-value: 1.18e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   1 AGIQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFL 80
Cdd:pfam00146  25 ARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGLVLADLNVGILYIL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  81 AVSSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFF 160
Cdd:pfam00146 105 ALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGWFIPLQPLAFIVFF 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 161 IGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGIGIFsdgIWFGLKIC 240
Cdd:pfam00146 185 IAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPLPGL---LWFLLKVF 261

                         250
                  ....*....|....
gi 2328704489 241 FFVILFVVMRAILP 254
Cdd:pfam00146 262 FVFFLFIWIRATLP 275
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-254 1.22e-109

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 318.67  E-value: 1.22e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   1 AGIQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFL 80
Cdd:PRK06076   39 ARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFGPELVIADLNVGILYIL 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  81 AVSSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFF 160
Cdd:PRK06076  119 AISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFF 198

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 161 IGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGIGIFSDG-IWFGLKI 239
Cdd:PRK06076  199 IAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFPLGGGIPGaIWFVLKV 278

                         250
                  ....*....|....*
gi 2328704489 240 CFFVILFVVMRAILP 254
Cdd:PRK06076  279 AFFVFLFIWLRATLP 293
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-254 1.11e-115

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 334.41  E-value: 1.11e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   1 AGIQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFL 80
Cdd:COG1005    38 ARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGLVLADLNVGLLYVL 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  81 AVSSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMS-IWLIFPLLPVSVMF 159
Cdd:COG1005   118 AVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGgLWFILPQPLAFVVF 197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 160 FIGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGIGIFSD---GIWFG 236
Cdd:COG1005   198 FIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPILPLGGlpgILWFL 277

                         250
                  ....*....|....*...
gi 2328704489 237 LKICFFVILFVVMRAILP 254
Cdd:COG1005   278 LKTLFFIFFFIWVRATLP 295
NADHdh pfam00146
NADH dehydrogenase;
1-254 1.18e-112

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 325.58  E-value: 1.18e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   1 AGIQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFL 80
Cdd:pfam00146  25 ARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGLVLADLNVGILYIL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  81 AVSSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFF 160
Cdd:pfam00146 105 ALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGWFIPLQPLAFIVFF 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 161 IGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGIGIFsdgIWFGLKIC 240
Cdd:pfam00146 185 IAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPLPGL---LWFLLKVF 261

                         250
                  ....*....|....
gi 2328704489 241 FFVILFVVMRAILP 254
Cdd:pfam00146 262 FVFFLFIWIRATLP 275
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-254 1.22e-109

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 318.67  E-value: 1.22e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   1 AGIQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFL 80
Cdd:PRK06076   39 ARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFGPELVIADLNVGILYIL 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  81 AVSSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFF 160
Cdd:PRK06076  119 AISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFF 198

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 161 IGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGIGIFSDG-IWFGLKI 239
Cdd:PRK06076  199 IAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFPLGGGIPGaIWFVLKV 278

                         250
                  ....*....|....*
gi 2328704489 240 CFFVILFVVMRAILP 254
Cdd:PRK06076  279 AFFVFLFIWLRATLP 293
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 3-254 1.48e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 305.88  E-value: 1.48e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFLAV 82
Cdd:MTH00054   33 IQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYGEGVVLSDLGIGILYLFAV 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00054  113 SSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVS 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGI-GIFSDGIWFGLKICF 241
Cdd:MTH00054  193 ALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPtSYFSNFVWFGIKIAL 272

                         250
                  ....*....|...
gi 2328704489 242 FVILFVVMRAILP 254
Cdd:MTH00054  273 IIFLFIWIRASYP 285
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-254 1.89e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 295.49  E-value: 1.89e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFLAV 82
Cdd:MTH00216   37 MQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYERGVLISDFKIGILYILAI 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMS-IWLIFPLLPVSVMFFI 161
Cdd:MTH00216  117 SSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFA 196

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 162 GCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGIgIFSDGIWFGLKICF 241
Cdd:MTH00216  197 SALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSPIKY-FKGGAGWFGLKVVF 275

                         250
                  ....*....|...
gi 2328704489 242 FVILFVVMRAILP 254
Cdd:MTH00216  276 IIFLFIWVRASFP 288
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 3-254 3.02e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 271.36  E-value: 3.02e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFgnVISDPQLGVLYFLAV 82
Cdd:MTH00143   32 FQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYF--SSSYFGWGLLFFLCV 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00143  110 SSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLGFLMFPVFLMWFVS 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGIGifsdGIWFGLKICFF 242
Cdd:MTH00143  190 CLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVLFLLG----GVVFMFKVLFF 265

                         250
                  ....*....|..
gi 2328704489 243 VILFVVMRAILP 254
Cdd:MTH00143  266 AFLFIWVRASYP 277
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-254 2.05e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 260.72  E-value: 2.05e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFLAV 82
Cdd:MTH00029   38 MQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGVFLSDLDVGVLYFLAI 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00029  118 SSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVA 197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFG-----IGIFSDG----- 232
Cdd:MTH00029  198 SLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWLSPLDgiptpPEAFSIFeqias 277

                         250       260
                  ....*....|....*....|....*.
gi 2328704489 233 ----IWFGLKICFFVILFVVMRAILP 254
Cdd:MTH00029  278 skssFWFFTKSSIFILFFIWSRASFP 303
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-254 9.06e-85

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 255.67  E-value: 9.06e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVisDPQLGVLYFLAV 82
Cdd:MTH00040   35 MQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPTL--NVNLSLLLVLGL 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00040  113 SSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLLFPCLPLFYIWFIS 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGwLSPFGIGIFSDGIWFGLKICFF 242
Cdd:MTH00040  193 TLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGG-GSPFNEIFPINIIIVGIKTTFL 271

                         250
                  ....*....|..
gi 2328704489 243 VILFVVMRAILP 254
Cdd:MTH00040  272 VFLFLWVRASYP 283
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 3-217 7.32e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 253.28  E-value: 7.32e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFgnVISDPQLGVLYFLAV 82
Cdd:MTH00111   36 MQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPF--PLADLNLGLLFLLAM 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00111  114 SSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLIFSSWPLAMMWYIS 193

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFL 217
Cdd:MTH00111  194 TLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFL 248
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 3-223 2.53e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 249.52  E-value: 2.53e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGnvISDPQLGVLYFLAV 82
Cdd:MTH00134   37 MQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYP--VTDLNLGILFILAL 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00134  115 SSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYIS 194

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSP 223
Cdd:MTH00134  195 TLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIP 255
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 4-254 5.34e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 248.39  E-value: 5.34e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   4 QRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWavIPFSFGNVISDPQLGVLYFLAVS 83
Cdd:MTH00104   32 QLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMW--IPLPMPYPLINMNLGVLFILAMS 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  84 SLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIGC 163
Cdd:MTH00104  110 SLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLAMMWFIST 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 164 LAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFGIGIFSdgIWFGLKICFFV 243
Cdd:MTH00104  190 LAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNPYMPELYT--TNFTIKTLLLT 267

                         250
                  ....*....|.
gi 2328704489 244 ILFVVMRAILP 254
Cdd:MTH00104  268 ILFLWIRASYP 278
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 3-218 1.88e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 247.23  E-value: 1.88e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWavIPFSFGNVISDPQLGVLYFLAV 82
Cdd:MTH00071   36 MQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIW--TPLPMPNNLSNLNLGILFILAL 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00071  114 SSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFIS 193

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLG 218
Cdd:MTH00071  194 TLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLG 249
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 3-254 7.21e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 245.20  E-value: 7.21e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGnvISDPQLGVLYFLAV 82
Cdd:MTH00218   33 MQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFS--LINLNLGVLFILAI 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00218  111 SSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLLIPEWPLALMWFIS 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFgigifsdgiWFGLKICFF 242
Cdd:MTH00218  191 TLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTI---------NLMLKATLL 261

                         250
                  ....*....|..
gi 2328704489 243 VILFVVMRAILP 254
Cdd:MTH00218  262 VFLFLWVRASLP 273
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-254 3.73e-79

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 240.83  E-value: 3.73e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDpqLGVLYFLAV 82
Cdd:MTH00193   33 IQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLISFN--LGILFFLCC 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00193  111 SSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVS 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFgigifsdgiWFGLKICFF 242
Cdd:MTH00193  191 CLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSL---------LFYLKLLFI 261

                         250
                  ....*....|..
gi 2328704489 243 VILFVVMRAILP 254
Cdd:MTH00193  262 SFLFIWVRGTLP 273
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 3-254 1.28e-78

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 239.17  E-value: 1.28e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGnvISDPQLGVLYFLAV 82
Cdd:MTH00225   32 IQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSMFS--IYSFKFGILFFLCI 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00225  110 SSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYFWFMFVLFPLFFCWMIS 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGwlspfgiGIFSDGIWFGLKICFF 242
Cdd:MTH00225  190 MLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGG-------FFVTIDLFLILKIMLL 262

                         250
                  ....*....|..
gi 2328704489 243 VILFVVMRAILP 254
Cdd:MTH00225  263 AFWFIWVRGVLP 274
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 3-254 1.35e-73

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 226.55  E-value: 1.35e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGnvISDPQLGVLYFLAV 82
Cdd:MTH00195   33 IQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFG--FSSINLSVLFFLCV 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLLPVSVMFFIG 162
Cdd:MTH00195  111 SSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVILLCPPISFMWYVS 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGWLSPFgigifsdgiwFGLKICFF 242
Cdd:MTH00195  191 TLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGGGTII----------VALKSLFL 260

                         250
                  ....*....|..
gi 2328704489 243 VILFVVMRAILP 254
Cdd:MTH00195  261 SFCFLWVRGSLP 272
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 4-254 8.02e-69

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 214.64  E-value: 8.02e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   4 QRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISdpQLGVLYFLAVS 83
Cdd:MTH00010   35 QLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPSFFL--KFSILLFLCVS 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  84 SLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSiWLIFPLLPVSVMFFIGC 163
Cdd:MTH00010  113 SMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS-WILLMIIPLTVSWFITN 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 164 LAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLggwlsPFGIGIFSDGIWFGLKICFFV 243
Cdd:MTH00010  192 LAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFT-----SFIPSIFISDLMLILKTVFLA 266

                         250
                  ....*....|.
gi 2328704489 244 ILFVVMRAILP 254
Cdd:MTH00010  267 FLFIWIRATFP 277
ndhA CHL00032
NADH dehydrogenase subunit 1
 1-220 1.25e-61

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 197.48  E-value: 1.25e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   1 AGIQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISDPQLGVLYFL 80
Cdd:CHL00032   56 AGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWI 135

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  81 AVSSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMS-------IWlifpLL 153
Cdd:CHL00032  136 AISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKygfwgwnLW----RQ 211

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2328704489 154 PVS-VMFFIGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGW 220
Cdd:CHL00032  212 PIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGW 279
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 4-218 1.47e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 158.91  E-value: 1.47e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   4 QRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFgnVISDPQLGVLYFLAVS 83
Cdd:MTH00090   28 QNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFF--DFLSFEYSLLFFLCLI 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  84 SLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLteivMAQMSIWLIFPLLPvsvmFFIGC 163
Cdd:MTH00090  106 GFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSF----VSSFSLSLFVIYLP----FLIMI 177

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2328704489 164 LAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLG 218
Cdd:MTH00090  178 IAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 3-254 7.46e-37

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 131.59  E-value: 7.46e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   3 IQRRKGPNVIGYLGLLQPLADGLKLFVKETLLPTNANIVLFVLAPLITFILSLISWAVIPFSFGNVISdpQLGVLYFLAV 82
Cdd:MTH00058   32 IQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSYS--SLSLLWFLVV 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  83 SSLSVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQMSIWLIFPLlpVSVMFFIG 162
Cdd:MTH00058  110 TSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLFPL--IYILWLVC 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 163 CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLGGwlspfgigifsdGIWFGLkICFF 242
Cdd:MTH00058  188 ILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGG------------GFVSIM-LLFH 254

                         250
                  ....*....|..
gi 2328704489 243 VILFVVMRAILP 254
Cdd:MTH00058  255 LLFFMWARATLP 266
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-254 2.67e-33

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 122.60  E-value: 2.67e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489   1 AGIQRRKGPnvigylGLLQPLADGLKLFVKETLLPTNANiVLFVLAPLITFILSLISWAVIPFSFGNVISDPQ---LGVL 77
Cdd:COG0650    30 ARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAMLLAALLVPVLTTGPPLSFSgdlIVLV 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489  78 YFLAVSSLsvyGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCVCVGTLNLTEIVMAQM---SIWLIFPLLP 154
Cdd:COG0650   103 YLLALARF---FLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAahgPLLLSPSLLL 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328704489 155 VSVMFFIGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSVCFLggwlsPFGIG--IFSDG 232
Cdd:COG0650   180 AAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFL-----PWGIAltLLLAL 254

                         250       260
                  ....*....|....*....|..
gi 2328704489 233 IWFGLKICFFVILFVVMRAILP 254
Cdd:COG0650   255 LLFLLKLLVLAVLLAVIEASTA 276
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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