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Conserved domains on  [gi|2337930106|gb|UZT67588|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Saphonecrus sp. ZJUH 20220015]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 35-315 5.04e-90

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 270.87  E-value: 5.04e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00193   26 ERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLISFNLGIL 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00193  106 FFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFL 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYIFINYLKVLFIMCLI 274
Cdd:MTH00193  186 IWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLFYLKLLFISFLF 265

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2337930106 275 IIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYLYVIKWFI 315
Cdd:MTH00193  266 IWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 35-315 5.04e-90

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 270.87  E-value: 5.04e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00193   26 ERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLISFNLGIL 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00193  106 FFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFL 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYIFINYLKVLFIMCLI 274
Cdd:MTH00193  186 IWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLFYLKLLFISFLF 265

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2337930106 275 IIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYLYVIKWFI 315
Cdd:MTH00193  266 IWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
35-308 3.08e-75

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 233.13  E-value: 3.08e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNL- 113
Cdd:pfam00146  20 ERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGLVLADLNVg 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 114 -LLFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPM 192
Cdd:pfam00146 100 iLYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGWFIPLQPLA 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 193 MLMFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLG------NMDYIFINYLK 266
Cdd:pfam00146 180 FIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGgwlgpfPLPGLLWFLLK 259

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 2337930106 267 VLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPV-ILNLLIYL 308
Cdd:pfam00146 260 VFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLsLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 35-314 6.58e-73

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 228.09  E-value: 6.58e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILP--NYYNLYYMDLN 112
Cdd:COG1005    33 ERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPfgPGLVLADLNVG 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 113 LLLFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLN-FIIYMYP 191
Cdd:COG1005   113 LLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGGLwFILPQPL 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 192 MMLMFMISLIAELNRTPFDLAEGESELVSGFNTEYmSGM-FALIFMSEYGMIIIMSILFSLFYLG------------NMD 258
Cdd:COG1005   193 AFVVFFIAALAETNRAPFDLPEAESELVAGYHTEY-SGMkFALFFLAEYANMFLVSALATTLFLGgwlgpfpilplgGLP 271

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2337930106 259 YIFINYLKVLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPV-ILNLLIYLYVIKWF 314
Cdd:COG1005   272 GILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLsLVNLVLTAAVVLLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 35-315 5.04e-90

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 270.87  E-value: 5.04e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00193   26 ERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLISFNLGIL 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00193  106 FFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFL 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYIFINYLKVLFIMCLI 274
Cdd:MTH00193  186 IWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLFYLKLLFISFLF 265

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2337930106 275 IIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYLYVIKWFI 315
Cdd:MTH00193  266 IWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 35-311 1.49e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 264.81  E-value: 1.49e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00143   25 ERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSSSYFGWGLL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00143  105 FFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLGFLMFPVFL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYIFINY-----LKVLF 269
Cdd:MTH00143  185 MWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVLFLLGgvvfmFKVLF 264

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 2337930106 270 IMCLIIIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYLYVI 311
Cdd:MTH00143  265 FAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 35-312 1.98e-77

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 238.78  E-value: 1.98e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00225   25 ERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSMFSIYSFKFGIL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00225  105 FFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYFWFMFVLFPLFF 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYI--FINYLKVLFIMC 272
Cdd:MTH00225  185 CWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVTidLFLILKIMLLAF 264

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 2337930106 273 LIIIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYLYVIK 312
Cdd:MTH00225  265 WFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIIL 304
NADHdh pfam00146
NADH dehydrogenase;
35-308 3.08e-75

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 233.13  E-value: 3.08e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNL- 113
Cdd:pfam00146  20 ERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGLVLADLNVg 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 114 -LLFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPM 192
Cdd:pfam00146 100 iLYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGWFIPLQPLA 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 193 MLMFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLG------NMDYIFINYLK 266
Cdd:pfam00146 180 FIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGgwlgpfPLPGLLWFLLK 259

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 2337930106 267 VLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPV-ILNLLIYL 308
Cdd:pfam00146 260 VFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLsLANLLLTA 302
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 35-308 1.30e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 231.72  E-value: 1.30e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00218   26 ERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSLINLNLGVL 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00218  106 FILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLLIPEWPLAL 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYIFINYLKVLFIMCLI 274
Cdd:MTH00218  186 MWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTINLMLKATLLVFLF 265

                         250       260       270
                  ....*....|....*....|....*....|....
gi 2337930106 275 IIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYL 308
Cdd:MTH00218  266 LWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLH 299
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 35-314 6.58e-73

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 228.09  E-value: 6.58e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILP--NYYNLYYMDLN 112
Cdd:COG1005    33 ERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPfgPGLVLADLNVG 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 113 LLLFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLN-FIIYMYP 191
Cdd:COG1005   113 LLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGGLwFILPQPL 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 192 MMLMFMISLIAELNRTPFDLAEGESELVSGFNTEYmSGM-FALIFMSEYGMIIIMSILFSLFYLG------------NMD 258
Cdd:COG1005   193 AFVVFFIAALAETNRAPFDLPEAESELVAGYHTEY-SGMkFALFFLAEYANMFLVSALATTLFLGgwlgpfpilplgGLP 271

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2337930106 259 YIFINYLKVLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPV-ILNLLIYLYVIKWF 314
Cdd:COG1005   272 GILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLsLVNLVLTAAVVLLF 328
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 35-311 1.31e-72

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 226.55  E-value: 1.31e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00195   26 ERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGFSSINLSVL 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00195  106 FFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVILLCPPISF 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNmDYIFINYLKVLFIMCLI 274
Cdd:MTH00195  186 MWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGG-GGTIIVALKSLFLSFCF 264

                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 2337930106 275 IIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYLYVI 311
Cdd:MTH00195  265 LWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAI 301
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 35-317 9.29e-72

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 224.50  E-value: 9.29e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00104   24 ERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMPYPLINMNLGVL 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00104  104 FILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLAM 183

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYIFINYL-------KV 267
Cdd:MTH00104  184 MWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNPYMPELyttnftiKT 263

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2337930106 268 LFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPVILNLLIylyvikWFIMM 317
Cdd:MTH00104  264 LLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCM------WHISL 307
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 35-311 2.27e-69

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 218.69  E-value: 2.27e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00040   28 ERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPTLNVNLSLL 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00040  108 LVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLLFPCLPLFY 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDY--------IFINYLK 266
Cdd:MTH00040  188 IWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGSPfneifpinIIIVGIK 267

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 2337930106 267 VLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYLYVI 311
Cdd:MTH00040  268 TTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLL 312
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 35-307 5.13e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 217.94  E-value: 5.13e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00134   30 ERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPVTDLNLGIL 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00134  110 FILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLLLPAWPLAA 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYIFINYLKVLFIM--- 271
Cdd:MTH00134  190 MWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELTTINLMtka 269

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 2337930106 272 -CLIIIF---RGSFPRYRYDNLMILIWKMFLPVILNLLIY 307
Cdd:MTH00134  270 aLLSVVFlwvRASYPRFRYDQLMHLVWKNFLPLTLALVIW 309
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 35-307 6.14e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 217.57  E-value: 6.14e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00071   29 ERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNLSNLNLGIL 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00071  109 FILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLIIPAWPMAA 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYIFINYLKVLFIM--- 271
Cdd:MTH00071  189 MWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELSTMNLMika 268

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 2337930106 272 -CLIIIF---RGSFPRYRYDNLMILIWKMFLPVILNLLIY 307
Cdd:MTH00071  269 sILSMLFlwvRASYPRFRYDQLMHLVWKNFLPITLAMTIF 308
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 35-304 2.25e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 213.60  E-value: 2.25e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00111   29 ERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPLADLNLGLL 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPMML 194
Cdd:MTH00111  109 FLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLIFSSWPLAM 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMdyiFINYLKVLFIMCLI 274
Cdd:MTH00111  189 MWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPS---TLNLPPELFTINLM 265

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 2337930106 275 -------IIF---RGSFPRYRYDNLMILIWKMFLPVILNL 304
Cdd:MTH00111  266 tktllltSGFlwiRASYPRFRYDQLMHLLWKQFLPLTLAL 305
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 35-306 1.33e-66

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 211.18  E-value: 1.33e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00010   27 ERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPSFFLKFSIL 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMyPMML 194
Cdd:MTH00010  107 LFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYSWILLMII-PLTV 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYIFIN----YLKVLFI 270
Cdd:MTH00010  186 SWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFIPSIFISdlmlILKTVFL 265

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 2337930106 271 MCLIIIFRGSFPRYRYDNLMILIWKMFLPVILNLLI 306
Cdd:MTH00010  266 AFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM 301
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
35-306 3.82e-65

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 207.74  E-value: 3.82e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILP--NYYNLYYMDLN 112
Cdd:PRK06076   34 ERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPfgPELVIADLNVG 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 113 LLLFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPM 192
Cdd:PRK06076  114 ILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNIIPQPPA 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 193 MLMFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLG----------NMDYIFI 262
Cdd:PRK06076  194 FVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGgwlppfplggGIPGAIW 273

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 2337930106 263 NYLKVLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPV-ILNLLI 306
Cdd:PRK06076  274 FVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLsLVNLLL 318
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 35-306 7.85e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 204.58  E-value: 7.85e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNL- 113
Cdd:MTH00054   26 ERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYGEGVVLSDLGIg 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 114 -LLFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPM 192
Cdd:MTH00054  106 iLYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIWFIFPLFPA 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 193 MLMFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLG------NMDYIFINYL- 265
Cdd:MTH00054  186 AIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGgwlvisGPTSYFSNFVw 265

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 2337930106 266 ---KVLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPVILNLLI 306
Cdd:MTH00054  266 fgiKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVV 309
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 35-313 8.78e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 204.58  E-value: 8.78e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNL- 113
Cdd:MTH00216   30 ERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYERGVLISDFKIg 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 114 -LLFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQY-YLNFIIYMYP 191
Cdd:MTH00216  110 iLYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQNnGIWFFFPLFP 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 192 MMLMFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGN----MDYIFIN---- 263
Cdd:MTH00216  190 VAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGwlspIKYFKGGagwf 269

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2337930106 264 YLKVLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYLYVIKW 313
Cdd:MTH00216  270 GLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLF 319
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 35-306 1.42e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 168.27  E-value: 1.42e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYY--MDLN 112
Cdd:MTH00029   31 ERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGVFLsdLDVG 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 113 LLLFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYYLNFIIYMYPM 192
Cdd:MTH00029  111 VLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVWLIIPLFPA 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 193 MLMFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLG----------------- 255
Cdd:MTH00029  191 AIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGgwlspldgiptppeafs 270

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2337930106 256 ------NMDYIFINYLKVLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPVILNLLI 306
Cdd:MTH00029  271 ifeqiaSSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVI 327
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 35-312 2.03e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 165.84  E-value: 2.03e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00090   20 ERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDFLSFEYSLL 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSlidfqyylNFIIYMYPMML 194
Cdd:MTH00090  100 FFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS--------SFSLSLFVIYL 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 195 MFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGnmdyifINYLKVLFIMCLI 274
Cdd:MTH00090  172 PFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK------FSFLMLFLIFSLL 245

                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 2337930106 275 IIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYLYVIK 312
Cdd:MTH00090  246 IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLF 283
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 35-311 2.64e-39

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 140.06  E-value: 2.64e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKEIFLMKNMNYMFYIFSPMLMLMLMLMMYLILPNYYNLYYMDLNLL 114
Cdd:MTH00058   25 ERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSYSSLSLL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 115 LFLCFLSLGVYMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMmssLIFTDSFNFNSLIDFQYYLNFIIYMYPMM- 193
Cdd:MTH00058  105 WFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIV---IFCGLCYGSYSLVDFYYSGWLSVLLFPLIy 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 194 LMFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLGNMDYIFInylkVLFIMCL 273
Cdd:MTH00058  182 ILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIM----LLFHLLF 257

                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 2337930106 274 IIIFRGSFPRYRYDNLMILIWKMFLPVilnLLIYLYVI 311
Cdd:MTH00058  258 FMWARATLPRVRYDYFVNFFWEYCLVL---LILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
 35-306 4.10e-26

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 106.19  E-value: 4.10e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  35 ERKILGYIQIRKGPNKVNFMGLIQPFSDALKLFSKE-IFLMKNMNYMFYIfSPMLMLMLMLMMYLILPNYYNLYYMDLNL 113
Cdd:CHL00032   51 EREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEdLLPSRGDIRLFSI-GPSIAVISILLSYLVIPFGYHLVLADLSI 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 114 llflcflslGVYM-----------MMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQYY 182
Cdd:CHL00032  130 ---------GVFLwiaissiapigLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSK 200

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 183 LNFI---IYMYPM-MLMFMISLIAELNRTPFDLAEGESELVSGFNTEYmSGM-FALIFMSEYGMIIIMSILFSLFYLGNM 257
Cdd:CHL00032  201 YGFWgwnLWRQPIgFIVFLISSLAECERLPFDLPEAEEELVAGYQTEY-SGIkFGLFYVASYLNLLVSSLFVTVLYLGGW 279

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2337930106 258 DY-------------------------IFINYLKVLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPVIL-NLLI 306
Cdd:CHL00032  280 NLsipyifipelfeinktggvfgttigIFITLAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISLgNLLL 354
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
36-308 1.67e-21

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 92.55  E-value: 1.67e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106  36 RKILGYIQIRKGPnkvnfmGLIQPFSDALKLFSKEIFLMKNMNYMFYiFSPMLMLMLMLMMYLILPNYYNLYYMDLNLLL 115
Cdd:COG0650    26 RKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFR-AAPYVALAAMLLAALLVPVLTTGPPLSFSGDL 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 116 FLCFLSLGV--YMMMISGWSSNSMYSMLGSIRSVAQTISYEVSLILIMMSSLIFTDSFNFNSLIDFQY---YLNFIIYMY 190
Cdd:COG0650    99 IVLVYLLALarFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAahgPLLLSPSLL 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2337930106 191 PMMLMFMISLIAELNRTPFDLAEGESELVSGFNTEYMSGMFALIFMSEYGMIIIMSILFSLFYLG------NMDYIFINY 264
Cdd:COG0650   179 LAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPwgialtLLLALLLFL 258

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 2337930106 265 LKVLFIMCLIIIFRGSFPRYRYDNLMILIWKMFLPVILNLLIYL 308
Cdd:COG0650   259 LKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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