|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.57e-180 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 502.05 E-value: 4.57e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 1 MNPQAKLIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQ 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 81 TGQWDITQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPTLLTTMAVL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 161 STALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSIKALKLSTLMTAWAKMPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYCATITLPPHTTNHIKQWHTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 2371279358 321 VSVLIAILTTLSIILLPISPMIITII 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.26e-145 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 413.05 E-value: 6.26e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 1 MNPQAKLIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQ 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 81 TGQWDITQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSlNPTLLTTMAVL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 161 STALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSIKALKLSTLMTAWAKMPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYCATITLPPHTTNHIKQWHTNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 2371279358 321 -VSVLIAILTTLSIILLPISPMIITII 346
Cdd:MTH00135 320 qLTLPLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.49e-140 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 401.99 E-value: 1.49e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 1 MNPQAKLIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQ 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 81 TGQWDITQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPTLLTTMAVL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 161 STALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSIKALKLSTLMTAWAKMPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYCATITLPPHTTNHIKQWHTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 2371279358 321 VSVLIAILTTLSIILLPISPMIITII 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
8.22e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 367.25 E-value: 8.22e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 1 MNPQAKLIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQ 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 81 TGQWDITQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPTLLTTMAVL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 161 STALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSIKALKLSTLMTAWAKMPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYCATITLPPHTTNHIKQWH-TNK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQfENT 320
|
330 340
....*....|....*....|....*.
gi 2371279358 320 PVSVLIAILTTLSIILLPISPMIITI 345
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.87e-101 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 302.27 E-value: 2.87e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 1 MNPQAKLIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQ 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 81 TGQWDITQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPTLLTTMAVL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 161 STALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSIKALKLSTLMTAWAKMPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYCATITLPPHTTNHIKQWHTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 2371279358 321 VSVLIAILTTLSIILLPISPMIITII 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
4.94e-88 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 268.34 E-value: 4.94e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 1 MNPQAKLIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQ 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 81 TGQWDITQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPTLLTTMAVL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 161 STALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSIKALKLSTLMTAWAKMPSL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYCATITLPPHTTNHIKQWHTNKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 2371279358 321 VSVLIAILTTLSIILL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.20e-64 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 207.75 E-value: 1.20e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 1 MNPQAKLIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWq 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 81 tgqwdITQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTpslNPTLLTTMAVL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLI---NNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 161 STALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSIKALKLSTLMTAWAKMPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYCAtITLPPHTTNHIKQWHTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 2371279358 321 VSVLIaILTTLSIILLPISPMIITI 345
Cdd:MTH00160 312 SLILN-FLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-310 |
3.14e-52 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 175.74 E-value: 3.14e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 7 LIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVnawqtgQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 87 TQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPTLLTTMAVLSTALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 167 WMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSIKALKLSTLMTAWAKMPSLSAMLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2371279358 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYcATITLPPHTTN 310
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-302 |
1.13e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 173.92 E-value: 1.13e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 5 AKLIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 85 DITqmtnstacLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNP-TLLTTMAVLSTA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 164 LGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSiKALKLSTLMTAWAKMPSLSAM 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYKTGLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2371279358 244 LMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYCATI 302
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-342 |
3.11e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 154.44 E-value: 3.11e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 8 IFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 88 qMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLymTTPSLNPTLLTTMAVLSTALGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 168 MGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSIKALKLSTLMTAWAKMPSLSAMLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 248 LLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYcatiTLPPHTTNHIKQWHTNKPVSVLIAI 327
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY----KSLILSNWMINFLMKINLLYSGLFI 308
|
330
....*....|....*
gi 2371279358 328 LTTLSIILLPISPMI 342
Cdd:MTH00197 309 LLMMMLPLLMIFTMI 323
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
4.07e-39 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 144.10 E-value: 4.07e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 14 LLGTTIAISSNHWVVAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQMTNS 92
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 93 ------------TACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIA----LLYMTTPSLNP---TL 153
Cdd:COG1007 192 laaggansplllLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAallrLLVEAFPGLAAdwqLL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 154 LTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTL--LNFYL--YSLMTAAVFLTLNSI-KALKLS 228
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLsRKGGEA 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2371279358 229 TLMTAWA----KMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAY 298
Cdd:COG1007 352 EEIEDLAglarRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
1.90e-34 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 131.48 E-value: 1.90e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 14 LLGTTIAISSNHWVVAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQMTNS 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 93 TA------------CLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIA----LLYMTTPSLNPT---L 153
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAvllrLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 154 LTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWM--AIIIVYNPKLTLLNFYL--YSLMTAAVFLTLNSI-KALKLS 228
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvGLAAGTAEGYSAVLFYLlaYLFMTLGAFGVISLLrRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2371279358 229 TLMTAWA----KMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.19e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 116.67 E-value: 1.19e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 13 LLLGTTIAISSNHWVVAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDI----- 86
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 87 ---TQMTNSTAC-----LILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNptLLTTMA 158
Cdd:MTH00196 82 vlnSGQSFSSVSvpigyLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 159 VLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNP----KLTLLNFYLYSLMTAAVFLTLNSIKALK--LSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2371279358 233 AWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
6.08e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 113.18 E-value: 6.08e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 23 SNHWVVAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQM-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 91 NSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLL-STVMKLPPIALLYMTTPSLNPT-----LLTTMAVLSTAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIRRSLLYLPSSpfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 165 GGWMGLNQTQVRKILAFSSISHLGWMAIII----VYNPKLTLLNFYLYSLMTAAVFLTLNSIKALKLSTLMTA-----WA 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRdygglAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 2371279358 236 KMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
7.88e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 113.12 E-value: 7.88e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 14 LLGTTIAISSNHWVVAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQMTNS 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 93 ------------TACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALL-------YMTTPSLNPTL 153
Cdd:TIGR01770 192 lsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFlrlflyiLFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 154 LTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLN--FYL--YSLMTAAVFLTLNSIKALK--- 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYIfiYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2371279358 227 ---LSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
8.10e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 109.85 E-value: 8.10e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 13 LLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQMTN- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 92 ---------STACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVM-KLPPIALLYMTTPSLNP-------TLL 154
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVYAILRVLTLLFGAdpalflgTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 155 TTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLY----SLMTAAVFLTLNSI----KALK 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAAGAIeratGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 227 LSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRL 296
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.83e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 108.95 E-value: 1.83e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 13 LLLGTTIAISSNHWVVAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 88 QMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPTLLTtmAVLSTALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 168 MGLNQTQVRKILAFSSISHLGW----MAIIIVYNPKLTLLNFYLYSLMTAAVF---LTLNSIKALkLSTLMTAWAKMPSL 240
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFsiiLSLKLTKGL-IVEVSGLSRKNPVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2371279358 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRL 296
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-302 |
9.16e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 90.30 E-value: 9.16e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 15 LGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAI---------EAATKYFLVQAAASVLVLFSSTVNAWQTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 84 ------------WDITQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLppIALLYMTTPSLNP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 152 TLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSLM----TAAVFLTLNSIKAL-- 225
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTylvsALASFTVICTLEEFgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 226 -------------------KLSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLS 286
Cdd:MTH00198 437 rtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330 340
....*....|....*....|...
gi 2371279358 287 LLGL-------FFYLRLAycATI 302
Cdd:MTH00198 517 LFAIictcisaFYYIRIV--ATI 537
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-342 |
5.56e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 87.75 E-value: 5.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 7 LIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHP-RAIEAATKYFLVQAAASVLVLFS-STVNAWQTGQW 84
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 85 DI---------TQMTNSTACLI----LTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIAL----LYMTTP 147
Cdd:CHL00049 194 ELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALatriFDIPFY 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 148 SLNP---TLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAI-IIVYNPK------LTLLNFYLyslmtaavFL 217
Cdd:CHL00049 274 FSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVGDSNdgyasmITYMLFYI--------FM 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 218 TLNSIKALKLSTLMTA----------WAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSL 287
Cdd:CHL00049 346 NLGTFACIVLFGLRTGtdnirdyaglYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSV 425
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2371279358 288 LGLFFYLRLAYCATITLPPHTTNHIKQWHT-----NKPVSVLIAILTTLSIIL-LPISPMI 342
Cdd:CHL00049 426 ISIYYYLKIIKLLMTGRNQEITPYVRNYRRsplrsNNSIELSMIVCVIASTIPgISMNPII 486
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
2.24e-17 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 82.79 E-value: 2.24e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 50 PRAIEAATKYFLVQAAASVLVLFSST----VNAWQTGQWDITQ--MTNSTACLILT-----AAISMKLGLVPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIALalITSPSLGLALAlvfviAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 119 LQGSPMTTSLLLSTVMKLPPIAL----LYMTTPSLNP---TLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMA 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairlLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 192 IIIVYNPKLTLLNFYLYslMTAAVFLTLNSIKALKLSTLMTA----------WAKMPSLSAMLMLTLLSLAGLPPLTGFL 261
Cdd:PRK02504 317 IGLVAGTEAGYASMVFY--LLAYLFMNLGAFACVILFSLRTGtdqisdyaglYQKDPLLTLGLSLCLLSLGGIPPLAGFF 394
|
..
gi 2371279358 262 PK 263
Cdd:PRK02504 395 GK 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
7.63e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 78.38 E-value: 7.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQMTNS--------TACLILTAAISM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAlaenptvvTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 105 KLGLVPFHFWFPEVLQGSPMTTSLLLS-TVMKLPPIALL----------YMTTPSLNpTLLTTMAVLSTALGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIriyftvfggdFRFALGLG-WLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 174 QVRKILAFSSISHLGWMAIIIVYNPKLTLLN--FYL--YSLMTAAVFLTLNSI----KALKLSTLMTAWAKMPSLSAMLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2371279358 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAY 298
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-335 |
1.06e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 77.70 E-value: 1.06e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 48 HHPRAIEAATKYFLVQAAASVLVLFS--------STVN----AWQTGQWDITQMTNSTACLILTAAISM---------KL 106
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLAlaflyatfGTLNmadlSAKIRGLSFPLTGGLAGNPPLALGVALalalwaftiKA 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 107 GLVPFHFWFPEVLQGSPMTTSLLLSTVM-KLPPIALL------YMTTPSLNPTLLTTMAVL------STALGGWMGLNQT 173
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVvNVGAYAIIrflytiFGISPSLIDFRAALSPILiilgavSAIIGALMMVVQK 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 174 QVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLY----SLMTAAVFLTLNSIKALKLSTLMTAWA----KMPSLSAMLM 245
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHiinhAIAKSLLFLASGVFIHAAGTRDIDELAglgrKMPIASFAFL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYCATITLPPHTTNHIKqwHTNKPVSVLI 325
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEEVEH--KESPSMSVVI 475
|
330
....*....|
gi 2371279358 326 AILTTLSIIL 335
Cdd:PRK12667 476 LVLALAVLIL 485
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-343 |
1.57e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 77.44 E-value: 1.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 33 LEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASVLVLFSStvnAWQTGQWDITQM-------------TNSTACLIL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMaylavkmsenptvVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 99 TAAISMKLGLVPFHFWFPEVLQGSP--MTTSLLLSTVMKLPPIALLYMT--TPSLNPT----LLTTMAVLSTALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPssISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 171 NQTQVRKILAFSSISHLGWMAI-----IIVYNPklTLLNFYLYSLMTAAVFLTLNSI--KALklsTLMTAWA-------- 235
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNHAlyKAL---LFLTAGAviyetgtr 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 236 ----------KMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQelTKQEMAPVATIISML-SLLGLFFYLRLAYCATITL 304
Cdd:PRK08376 382 nlnelgglarTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIgSVLTLASFVKVFHTAFFGP 459
|
330 340 350
....*....|....*....|....*....|....*....
gi 2371279358 305 PPHTTNHIKQwhTNKPVSVLIAILtTLSIILLPISPMII 343
Cdd:PRK08376 460 PSEKVMNVKE--PPKPMLVPMLIL-AIAIIGMGLFPWQI 495
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-288 |
3.77e-15 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 76.27 E-value: 3.77e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 49 HPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQW--DITQMTN-----STACLILTA---AISMKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplplTAQLLLFLAffiAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 119 LQGSPMTTSLLLSTVMK-----------LP--PIALLYMTTpslnptLLTTMAVLSTALGGWMGLNQTQVRKILAFSSIS 185
Cdd:COG1008 236 HVEAPTAGSVLLAGVLLkmggygllrfaLPlfPEASAYFAP------LLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 186 HLGWMAI-IIVYNPK------LTLLNFylySLMTAAVFLTLNSIKAlKLSTLMTA-----WAKMPSLSAMLMLTLLSLAG 253
Cdd:COG1008 310 HMGFVLLgIFALNPLglqgavLQMVSH---GLITAALFLLVGVLYD-RTHTRDIAdlgglAKRMPVLAALFLLAALASLG 385
|
250 260 270
....*....|....*....|....*....|....*
gi 2371279358 254 LPPLTGFLPKWLIIQELTKQemAPVATIISMLSLL 288
Cdd:COG1008 386 LPGTSGFVGEFLVLLGAFQV--NPWLAILAALGLI 418
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-344 |
4.67e-14 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 72.66 E-value: 4.67e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 50 PRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQ-WDITQMTN----STACLILTAAI----SMKLGLVPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELLNlplpFGVQTWLFLAFfiafAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 121 GSPMTTSLLLSTVM-KLPPIALLYMTTPsLNP-------TLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLlKMGTYGFLRFNLP-LFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 193 IIVYNPKLTLLN--FYLYS--LMTAAVFLTLNSI----KALKLSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGavFQMIShgLITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 265 LIIQELTKqeMAPVATIISMLSLLGLFFYLRLAYCATITLPPHtTNHIKQWHTNKPVSVLIAILTTLSIILLPISPMIIT 344
Cdd:TIGR01972 391 LILLGSFK--VNPVVAFLAALGIVLAAAYMLTLYKRVFFGELS-NPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLL 467
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-335 |
1.03e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 68.87 E-value: 1.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 2 NPQAKLIFTVSLLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHpRAIEAATKYFLVQAAASVLVLFSSTVNAWQT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 82 GQWDITQMTNS-----------TACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTV----------------- 133
Cdd:PRK08668 175 GTFDFADISQGlindtstgfalIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQlsklgaygfllvlyvlp 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 134 -MKLPPIALLYMTTPSLNpTLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLT----LLNFYLY 208
Cdd:PRK08668 255 gTKLFSEFGTYRGVPLFN-YILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFNH 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 209 SLMTAAVFLTLNSI----KALKLSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISM 284
Cdd:PRK08668 334 ALFKGLFFLIFAAViyrtGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFF 413
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2371279358 285 LSLLGLFFYLRLAYcaTITLPPHTTNHIKQWHTNKPVSVLIAILTTLSIIL 335
Cdd:PRK08668 414 GSIGSFLYVFRPLA--GVFLGQLPSDHKDVKEAPLPMLIPMAILVLLNVVF 462
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
1.26e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 68.64 E-value: 1.26e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 48 HHPRAIEAATKYFLVQAA------ASVLVLFsstvnaWQTGQWDITQMTNS------------TACLILTAAISmKLGLV 109
Cdd:COG1009 156 EKPSARRAARKAFLVTRVgdlgllLGILLLG------AIAGTLNFSELLAAaptilssplltlILLLLLLGAFG-KSAQF 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 110 PFHFWFPEVLQGsPMTTSLLL-STVMKLPPIALLYMTTP--SLNPTLLTTMAV--LSTAL-GGWMGLNQTQVRKILAFSS 183
Cdd:COG1009 229 PLHFWLPDAMEG-PTPVSALLhAATMVKAGVYLLARLSPlfALSPVWLTVVAIigAITALfAALIALAQTDIKRVLAYST 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 184 ISHLGWMAIIIVYnpkltllnfylySLMTAAVFLTLN--SIKAL------------------KLSTLmtaWAKMPSLSAM 243
Cdd:COG1009 308 VSQLGYMFLALGV------------GAYVAALFHLLThaFFKALlflgagsvihatgtrdirKMGGL---RKKMPITAIT 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2371279358 244 LMLTLLSLAGLPPLTGFLPKWLIIQE-LTKQEMAPVATIISML-SLLGLFFYLRLAY 298
Cdd:COG1009 373 FLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
5.79e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 63.21 E-value: 5.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQM--------TNST---ACLILTAA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlpTNRAiqiGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 102 ISMKLGLVPFHFWFPEVLQGSPMTTSLLLS----TVMKLPPIALLY--------MTTPSLNpTLLTTMAVLSTALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSgtstKVMIYLIIRIVYdvfkanfvFTTLPFN-NVFMILAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 170 LNQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLY----SLMTAAVFLTLNSIK----ALKLSTLMTAWAKMPSLS 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPKIT 377
|
250 260
....*....|....*....|....*.
gi 2371279358 242 AMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
8-292 |
1.65e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 61.87 E-value: 1.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 8 IFTVSLLLgttiAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSS----------TVN 77
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 78 AWQTGQW-DITQMTNSTACLILTAAISM-------KLGLVPFHFWFPEVLQGSPMTTSLLLSTVmkLPPIALL-----YM 144
Cdd:PRK06458 192 GEMAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPSPVSALLSGV--LLNVALYavlryYI 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 145 TT-----PSLNPTLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKL----TLLNFYLYSLMTAAV 215
Cdd:PRK06458 270 LIdaaigSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKSAI 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 216 FLTLNSIkALKLSTLMTA-----WAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQemAPVATIISMLSLLGL 290
Cdd:PRK06458 350 FFASGNV-LQKYGTRDINvirglLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLAR--GPLLIAILLLLLLTL 426
|
..
gi 2371279358 291 FF 292
Cdd:PRK06458 427 AF 428
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
2.05e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 62.25 E-value: 2.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 96 LILTAAISmKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALL------YMTTPSLNPTLLtTMAVLSTALGGWMG 169
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVarlapgFADVPVWRPTVL-VLGLATMLLGGWRA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 170 LNQTQVRKILAFSSISHLGWMAIIIVYNPK------LTLLnfYLYSLMTAAVFLTLNSIKAL-------KLSTLmtaWAK 236
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAML--LAHALFKAALFLVVGIIDHStgtrdirKLSGL---GRR 360
|
170 180
....*....|....*....|....*..
gi 2371279358 237 MPSLSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 361 QPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-289 |
5.49e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 60.70 E-value: 5.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 96 LILTAAISmKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPT-----LLTTMAVLSTALGGWMGL 170
Cdd:PRK12647 200 LVLGGAFT-KSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAV 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 171 NQTQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLY----SLMTAAVFLTLNSIK-------ALKLSTLMTAwakMPS 239
Cdd:PRK12647 279 RQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDhetgtrdITKLGGLRRA---MPI 355
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2371279358 240 LSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTkqEMAPVATIISMLSLLG 289
Cdd:PRK12647 356 TAAAALLAALSMAGLPPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-344 |
2.04e-09 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 58.50 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 34 EINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQMTNSTACLILTAAISMKL------- 106
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALLVNPTSPVIYGGLlllifgl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 107 ----GLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMT---------TPSLNpTLLTTMAVLSTALGGWMGLNQT 173
Cdd:PRK06277 210 lygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgglsyFPSAQ-GVLIALSVLAMVFGVVMALLQT 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 174 QVRKILAFSSISHLGWMAIIIVYNPKLTL-------LNFYLYslmTAAVFLTLNSI----KALKLSTLMTAWAKMPSLSA 242
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIY---KSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAF 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 243 MLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYcaTITLPPhttNHIKQWHTNKPVS 322
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKP---KPEELEYKNKKVP 440
|
330 340
....*....|....*....|....*
gi 2371279358 323 ---VLIAILTTLSIILLPISPMIIT 344
Cdd:PRK06277 441 kyaVFSLAVLTILCIILGLFPDLVT 465
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
96-333 |
2.36e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 58.42 E-value: 2.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 96 LILTAAISMKLGLVPFhFWFPEVLQGSPMTTSLLLSTVM-KLPPIALLYMTT------PSLNPTLLTTMAVLSTALGGWM 168
Cdd:PRK12663 211 LLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLtKVGIYALIRVFTllfpqeRELLHPLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 169 GLNQTQVRKILAFSSISHLGWM-AIIIVYNPK-LTLLNFYLYSLMT--AAVFLTLNSIKAL----KLSTLMTAWAKMPSL 240
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFIlLGLALGTPAgINGAIFYLVHDMVvkTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLF 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQ---ELTKQEMAPVATIISMLSLLGLFFYLRLAYCATItlPPHTTNHIKQ-WH 316
Cdd:PRK12663 370 GALFLILIFAIGGLPPFSGFWGKVLLVQgalDNGAYILLALMLITSLITMYSLFRIFFLAYWGDK--DGEEVNFKPIpLY 447
|
250
....*....|....*..
gi 2371279358 317 TNKPVSVLIAILTTLSI 333
Cdd:PRK12663 448 RKLPLSILAVVVIAMGI 464
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
28-263 |
4.47e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 57.75 E-value: 4.47e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 28 VAWtglEINTLAILPLISKSHhPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQM------------TNSTAC 95
Cdd:PRK12650 137 VAW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGIlhsdvwaekpglTTVVAV 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 96 LILTAAISmKLGLVPFHFWFPEVLQG-SPMTTSLLLSTVMKlPPIALLYMTTPSL--NPT---LLTTMAVLSTALGGWMG 169
Cdd:PRK12650 213 LIAVAAFT-KSAQFPFHFWLPEAMAAiTPVSAFLHAAAVVK-AGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 170 LNQTQVRKILAFSSISHLGWM-AIIIVYNP-KLT--LLNFYLYSLMTAAVFLTLNSIK----ALKLSTLMTAWAKMPSLS 241
Cdd:PRK12650 291 VQKTDLKKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFTF 370
|
250 260
....*....|....*....|..
gi 2371279358 242 AMLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 371 VSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
7.37e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 56.75 E-value: 7.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 50 PRAIEAATKYFLVQAAASVLVLFS----STVNAWQTGQWDI-----TQMTNSTACLILTA---AISMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIadllnLPLPPGVQYWLFLAffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 118 VLQGSPMTTSLLLSTVM-KLPPIALLYMTTPsLNP-------TLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGW 189
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILlKMGAYGLLRFSLP-LFPdashefaPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 190 --MAIIIVYNPKLTLLNFYLYS--LMTAAVFLTLNSIKALKLSTLMTA----WAKMPSLSAMLMLTLLSLAGLPPLTGFL 261
Cdd:PRK05846 316 vtLGIFAGNQLGIQGAIFQMIShgLSSAALFLLVGVLYDRLHTRDIADygglAKVMPVLAAFFLFFAMASLGLPGTSGFV 395
|
....*.
gi 2371279358 262 PKWLII 267
Cdd:PRK05846 396 GEFLIL 401
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-290 |
1.54e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 55.89 E-value: 1.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 55 AATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQMTNSTACLILT-----AAISMKLGLVPFHFWFPEVLQGSPMTTSLL 129
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVflllfLGFGIKAGIIPFHKWLPYAHPASPSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 130 LSTVM-KLPPIALLYMTTPSLNP-----TLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGwmaiIIVYNPKLTLL 203
Cdd:PRK08667 243 MSGVMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIG----IILMGIGLYVI 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 204 nFYLYSLMT-------AAVFLTLNsiKALKLSTL-MTAWA------------------KMPSLSAMLMLTLLSLAGLPPL 257
Cdd:PRK08667 319 -FGVYGLDTlallalgGALFHSLN--HALFKSLLfLTAGSvvhatgtrniekmgglvkLMPYTSALFLVGAVSIAALPPF 395
|
250 260 270
....*....|....*....|....*....|....*..
gi 2371279358 258 TGFLPKWLIIQELTK--QEMAPVATI--ISMLSLLGL 290
Cdd:PRK08667 396 NGFASELLLYESFFQsfSVADPLIKIllFSVLAIFAL 432
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
3.67e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 54.57 E-value: 3.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDIT--QMTNSTACLILTAAISMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSglATADPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 111 FHFWFPEVLQGSPMTTSLLLS-TVMKLPPIALLYMTTPSLNPTL-LTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSgVVVKAGVFPLVRCALDVPGLDLiVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 189 WmaiiIVYNPKLTllnfYLYSLMTAAVFLTLNSIKALKLSTLMTAWAKMP---SLSAMLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07234 283 F----ILAAPLVG----GLYALAHGLVKSTLFLCAGALPSRNFTELISQMlgiGKWIPLTMASFSIAGFPLLAGFVSKVL 354
|
....*.
gi 2371279358 266 IIQELT 271
Cdd:PRK07234 355 TLKNLL 360
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-292 |
4.03e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 54.76 E-value: 4.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 13 LLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAA------SVLVLFSSTVNAWQTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 87 TQMTNSTACL---ILTAAISM-------KLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPT---- 152
Cdd:PRK08676 191 TELAAHASLLspsVLGASFLFifigflaKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 153 ----LLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKL----TLLNFYLYSLMTAAVFLTLNSI-- 222
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLalfwMLFHMLAHSLVKSGLFFSAGILhr 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2371279358 223 --KALKLSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFF 292
Cdd:PRK08676 351 qyRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSF 422
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
4.08e-08 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 49.18 E-value: 4.08e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2371279358 291 FFYLRLAYCATITLPPHTTNHIKQWHTNKPV-SVLIAILTTLSIILLPISP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKnTLLLPTLTTLSILLLPLTP 51
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
2.65e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 52.02 E-value: 2.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 55 AATKYFLVQAAASVLVLFSSTVNAWQTGQWD------ITQMTNSTACLILTAAI----SMKLGLVPFHFWFPEV-LQGSP 123
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 124 MTTSLLLSTVMKLPPIAL------LYMTTPSLNPTLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYN 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 198 PKLTLL----NFYLYSLMTAAVFLTLNSIKAL-------KLSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK07363 318 TQLSLLgavaQMISHGLILALLFHLVGIVERKvgtrdldVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
..
gi 2371279358 267 IQ 268
Cdd:PRK07363 398 FQ 399
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-335 |
3.03e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 52.00 E-value: 3.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 95 CLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTP--SLNPTLL---TTMAVLSTALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfEQAPLALiivTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 170 LNQTQVRKILAFSSISHLGWMAIII-VYNPKLTLLNFYLYSLMTAAVFLTLNS-IKALKLSTLMTawaKMPSLSAMLMLT 247
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSvIHALSDEQDMR---KMGGLISFLPLT 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 248 L-------LSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLS-LLGLFFYLRLAYCATITLPPHTTNHIKQWHTNK 319
Cdd:MTH00020 370 YiffligsLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGD 449
|
250
....*....|....*.
gi 2371279358 320 PVSVLIAILTTLSIIL 335
Cdd:MTH00020 450 WNLLLPLGILALGSIF 465
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
8.61e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 50.60 E-value: 8.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 48 HHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQMTNS---------------TACLILTAAISmKLGLVPFH 112
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDselienikghplfliTLILIFIGAAA-KSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 113 FWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPT-----LLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHL 187
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 188 GWMAIIIVYNPK------LTLLNFYL--YSLMTAAVFLtLNSIKALKLST-----LMTAWAKMPSLSAMLMLTLLSLAGL 254
Cdd:PRK12649 315 AYLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFL-VAGIVAHEAATrdirkLGGLRKEMPITFIVASIAALAMAGI 393
|
....*....
gi 2371279358 255 PPLTGFLPK 263
Cdd:PRK12649 394 PPLNGFLSK 402
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
103-268 |
1.19e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 50.34 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 103 SMKLGLvpfHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTP-----SLNPTLLTTMAVLSTALGGWMGLNQTQVRK 177
Cdd:MTH00032 239 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPlfekaPLTLLIITIFGALTAFFAATVGLVQNDLKK 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 178 ILAFSSISHLGWMAIIIVY--NPKLTLLNFYLYSLMTAAVFLTLNSI---------KALKLSTLMTAwakMPSLSAMLML 246
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGSVihsttvdeqDMRKMGGLIHS---IPFTYTMMLI 392
|
170 180
....*....|....*....|..
gi 2371279358 247 TLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-285 |
1.52e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 49.70 E-value: 1.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 55 AATKYFLVQAAASVLVLFSSTVNAWQTG-------QWDITQMTNSTACLILTA---AISMKLGLVPFHFWFPEVLQGSPM 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGassfdyePLRSHTLPLSTQLLLLAPilvGFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 125 TTSLLLSTVM-KLPPIALL------YMTTPSLNPTLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYN 197
Cdd:PRK06473 238 PVSVLLAGVLlKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 198 PKLTLLNFYL----YSLMTAAVFLTL-------NSIKALKLSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILAAVFqmisHGLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
250
....*....|....*....
gi 2371279358 267 IQelTKQEMAPVATIISML 285
Cdd:PRK06473 398 FR--GSFPIFPVQTLLCMI 414
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
1.70e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 49.76 E-value: 1.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 82 GQWDITQMT----NSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSL------NP 151
Cdd:MTH00207 165 GHWSITNMWqtdmNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLsstywfNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 152 TLLTTmAVLSTALGGWMGLNQTQVRKILAFSSISHLG-WMAIIIVYNPKLTLLNFYLYSLMTAAVFLTLNSI-----KAL 225
Cdd:MTH00207 245 ALLLT-ASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhHSQ 323
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2371279358 226 KLSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 324 DLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-335 |
2.66e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 48.79 E-value: 2.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 103 SMKLGLVPFHFWFPEVLQGSPMTTSLL---LSTVMKLPPIA----LLYMTTPSLNPTLLTTMAVLSTALGGWMGLNQTQV 175
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPIAIAALfgaLLTKVGVYAIArtftLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 176 RKILAFSSISHLGWMAIIIVYNPKLTLLN--FYLYSLM--TAAVFLTLNSIKAL-------KLSTLMTAWakmPSLSAML 244
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGMIGaiYYLIHDMivKAALFLLIGIMIKItgttdlkKMGGLIKRY---PVLGWMF 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRLAYCATITLPPHTTNHIKQwhTNKPVSVL 324
Cdd:PRK07691 377 FIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGYDLNNKV--PVKKLLLP 454
|
250
....*....|.
gi 2371279358 325 IAILTTLSIIL 335
Cdd:PRK07691 455 AVVLVAITILY 465
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
88-272 |
6.68e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 47.90 E-value: 6.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 88 QMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTV-MKLPPIALLYMTTPSLNPTL-----LTTMAVLS 161
Cdd:PRK08042 176 LPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMIT 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 162 TALGGWMGLNQTQVRKILAFSSISHLGWMAI--------IIVYNPKLTLLNFY--LYSLMTAAVFLTLNSIKA------- 224
Cdd:PRK08042 256 AFVGGLYALMEHNIQRLLAYHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFKSVLFLGAgsvwfrt 335
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2371279358 225 --LKLSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 336 ghRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-289 |
6.82e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 47.50 E-value: 6.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 2 NPQAKLIFTVSLLLGTTIAISSNhWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQ- 80
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTk 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 81 TGQWD-----ITQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTV-----------MKLPPIALLYM 144
Cdd:PRK06589 194 TGNLDfvsggLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIvvktglfciykILLYIFGLSYL 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 145 TTPSLNPTLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGW--MAIIIVYNPKLTLLNFYL--YSLMTAAVFLTLN 220
Cdd:PRK06589 274 QRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMG 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2371279358 221 SIKALK----LSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMaPVATIISMLSLLG 289
Cdd:PRK06589 354 SIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQ-PWLSIIVMLVVIA 425
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
1.04e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.09 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 15 LGTTIAISSNHWVV---AWTGLEINTLAILPLISKSHHPraieaATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQMTN 91
Cdd:PRK06459 83 LGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRP-----AFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 92 STACLILTAAISMKLGLVPFHF--WFPEVLQGSPMTTSLLLSTVMKLP------PIALLYMTTPSLNPTL-LTTMAVLST 162
Cdd:PRK06459 158 PVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMgvygilKMTILTQTIPIGYFGLtILAIGAFSI 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 163 ALGGWMGLNQTQVRKILAFSSISHLGWM-----AIIIVYNPKLTLLNFYLYSLMTAA---------VFLTLNSIKALKLS 228
Cdd:PRK06459 238 LFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSfahsvaktgLFLSSGLQEKQSIT 317
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2371279358 229 TLMTAWAKMPSLSAMLMLtlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 318 YSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
1.75e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 46.45 E-value: 1.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 101 AISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTV-MKLPPIALLYMTTP-------SLNPTLLtTMAVLSTALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSWPilplgaqNLAPAVI-AMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 173 TQVRKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYSL---MTAAVFLTLNSIKALKLSTLMTAWAK-----MPSLSAML 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWGTIM 397
|
170 180
....*....|....*....|...
gi 2371279358 245 MLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI 420
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
96-303 |
1.80e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 46.54 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 96 LILTAAI--SMKLGLvpfHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTP-----SLNPTLLTTMAVLSTALGGWM 168
Cdd:MTH00210 216 LLFIGAVgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPlfegsPLALTIVTILGALTAFFAATV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 169 GLNQTQVRKILAFSSISHLGWMAIII-VYNPKLTLLNFYLYSLMTAAVFLTLNS-IKAL-------KLSTLMTAwakMPS 239
Cdd:MTH00210 293 GVVQNDLKKVIAYSTCSQLGYMVMVCgISNYSTSLFHLMNHAFFKALLFLSAGSvIHAVsdeqdmrKMGGLIKS---IPF 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2371279358 240 LSAMLMLTLLSLAGLPPLTGFLPKWLIIqELT--KQEMAPVATIISMLSLLGLFFYLRLAYCATIT 303
Cdd:MTH00210 370 TYVMILIGSLSLMGFPYLTGFYSKDLIL-ELTydKYYIAFAYWLGSFSALLTAFYSIRLIYLTFIT 434
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-288 |
2.39e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 46.29 E-value: 2.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 110 PFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPT-----LLTTMAVLSTALGGWMGLNQTQVRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 185 SHLGWMAIII------VYNPKLTLLNFY-------LYSLMTAAVF---------LTLNSIKALKLSTLMTAWAKMPSLSA 242
Cdd:PRK12646 308 SQLGMIMAMVgigggyAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcalfmgvgIIDHEAGTRDIRILSGMRQLFPKMNL 387
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2371279358 243 MLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLL 288
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIIIV 433
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
13-296 |
5.04e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 44.76 E-value: 5.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 13 LLLGTTIAISSNHWVVAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQ---- 88
Cdd:PRK08377 117 LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHiaql 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 89 --MTNSTACLILTAAISMKLG----LVPFHFWFPEVLQGSPMTTSLLLST-VMKLPPIAL---LYMTTPSLNPT----LL 154
Cdd:PRK08377 197 agTIDPTVAQVGLALLIFGLAveaeLFPLNAWAPDAYQAAPHPITVMFSAfVVKAGLYAMariLYLMQNANGWSsvlkLV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 155 TTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKL----TLLNFYLYSLMTAAVFLTLN----SIKALK 226
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdaGVFHMINHAIVKALLFLAVGyvgiTLGGTE 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 227 LSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSLLGLFFYLRL 296
Cdd:PRK08377 357 IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
96-298 |
5.54e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 45.02 E-value: 5.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 96 LILTAAISmKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPTLLTTMAVL-----STALGGWMGL 170
Cdd:MTH00209 180 LIVLAAMT-KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLllgslTTLMASMSAN 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 171 NQTQVRKILAFSSISHLGWMAIIIVYN-PKLTLLNFYLYSLMTAAVFLTLNSI-----KALKLSTLMTAWAKMPSLSAML 244
Cdd:MTH00209 259 VESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICAGNIihshgHSQDIRMVGNLWYQMPITSICL 338
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2371279358 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIISMLSL-LGLFFYLRLAY 298
Cdd:MTH00209 339 NIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSY 393
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-286 |
6.84e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 44.80 E-value: 6.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 110 PFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNPT----LLTTMAVLSTAL-GGWMGLNQTQVRKILAFSSI 184
Cdd:PRK12648 225 PFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTeewfWIVGGAGLITLLlGAYFALFQHDLKGLLAYSTI 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 185 SHLGWMAIIIVYNPKLTLLnfylyslmtAAVFLTLN--SIKAlklSTLMTA------------------WAKMPSLSAML 244
Cdd:PRK12648 305 SHLGLITLLLGLGSPLAAV---------AAIFHIINhaTFKA---SLFMAAgiidhetgtrdmrrlsglRRLMPITATLA 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2371279358 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAP--------VATIISMLS 286
Cdd:PRK12648 373 MVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGsldwllpvAATLAGAFS 422
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
27-270 |
8.56e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 44.49 E-value: 8.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 27 VVAWtglEINTLAILPLISKSH-HPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQM--------TNSTACLI 97
Cdd:PRK06521 139 LVAW---ETMSLSSWFLVIANHrEAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMraahlspfWASLVFLL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 98 LTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVM-KLPPIALLYMTTPSLNPTLLTTMAVL------STALGGWMGL 170
Cdd:PRK06521 216 ALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMlKVAIYGILRVVFDLLGAPGWWWGVLVlalgaiSAVLGVLYAL 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 171 NQTQVRKILAFSSISHLGW--------MAIIIVYNPKLTLLNFY--LYSLMTAAVFLTL------NSIKAL------KLS 228
Cdd:PRK06521 296 AEHDLKRLLAYSTIENIGIifvglglaMVFIAYGMPLLAALALTaaLYHLLNHALFKSLlflgagAVLHATgtrdmeKLG 375
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2371279358 229 TLMTawaKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06521 376 GLIR---RMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSL 414
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
1.21e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 43.81 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQM------TNSTACLILTAAISMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALsglhgsLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 107 GLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSLNP------TLLTTMAVLSTALGGWMGLNQTQVRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 181 FSSISHLGWMAIII---VYNPKLTLLN--FYLYS---------LMTAAVFLTLNSIKALKLSTLMTawaKMPSLSAMLML 246
Cdd:PRK06525 302 YSTITQLGYMFFGLslaILGSRLALEGsiAYIFNhafakslffLVAGALSYSCGTRLLPRLRGVLK---KLPLVGVGFCV 378
|
250 260
....*....|....*....|.
gi 2371279358 247 TLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIF 399
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
52-263 |
1.33e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 43.86 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 52 AIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQMTNSTACLILTAAISMKLGLV----------------PFHFWF 115
Cdd:PRK07376 171 AADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 116 PEVLQGSPMTTSLLLSTVMKLPPIALLYMTTP--SLNPTLLTTMAVLSTA---LGGWMGLNQTQVRKILAFSSISHLGWM 190
Cdd:PRK07376 251 PDAMEGPTPISALIHAATMVAAGVFLVARMYPvfEQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYM 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 191 AI---IIVYNPKltllnfyLYSLMTAAVF---LTLNS---IKALKLST-----------LMTAWAK-MPSLSAMLMLTLL 249
Cdd:PRK07376 331 VMamgCGAYSAG-------LFHLMTHAYFkamLFLGSgsvIHGMEEVVghdpvlaqdmrLMGGLRKyMPITAITFLIGCL 403
|
250
....*....|....
gi 2371279358 250 SLAGLPPLTGFLPK 263
Cdd:PRK07376 404 AISGIPPFAGFWSK 417
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
72-268 |
1.35e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 43.69 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 72 FSSTVNAWQTGQWDITQMTNST---ACLILTAA-ISMKLGLvpfHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTP 147
Cdd:MTH00108 189 FLLNLNSWDLQQIFMLNPNNSNlplMGLLLAATgKSAQFGL---HPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHP 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 148 SL--NPTLLTTMAVL---STALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYN-PKLTLLNFYLYSLMTAAVFLTLNS 221
Cdd:MTH00108 266 LMenNKTIQTLTLCLgaiTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLHICTHAFFKAMLFMCSGS 345
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2371279358 222 I--------KALKLSTLMTAwakMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00108 346 IihnlndeqDIRKMGGLFKT---LPFTSTALIIGSLALTGMPFLTGFYSKDLIIE 397
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-290 |
2.97e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.33 E-value: 2.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 55 AATKYFLVQAAASVLVLFSSTVNAWQTGQ--WDITQMTNSTACLILT--------AAISMKLGLVPFHFWFPEVLQGSPM 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAKSYPLALElllyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 125 TTSLLLSTVM-KLPPIALLYMTTPSLNPT------LLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYN 197
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAF 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 198 PKL----TLLNFYLYSLMTAAVFL----TLNSIKALKLSTLMTAWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQE 269
Cdd:PRK12561 298 TDLgisgAMLQMISHGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLG 377
|
250 260
....*....|....*....|...
gi 2371279358 270 LTKQEM--APVATIISMLSLLGL 290
Cdd:PRK12561 378 ITSSDVysSTFRTITILLAAVGL 400
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
69-267 |
3.77e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 42.25 E-value: 3.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 69 LVLFSSTVNAWQTGQWDITQMTNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALL--YMTT 146
Cdd:MTH00211 181 MVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLirLSPL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 147 PSLNPTLLTTMAVL---STALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYN-PKLTLLNFYLYSLMTAAVFL----- 217
Cdd:MTH00211 261 FQNNQLILGAVLLLgalTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFLHICTHAFFKAMLFMcsgsi 340
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2371279358 218 --TLNSIKAL-KLSTLMTAwakMPSLSAMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00211 341 ihGLNNEQDIrKMGGLSKN---LPFTSSCLFLGSLALMGFPFLSGFFSKDLIL 390
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
32-268 |
2.01e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 39.95 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 32 GLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASVLVLFS--------STVNAWQTGQW--DITQMTNSTACLILTAA 101
Cdd:PRK12665 139 GFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGialvyaatGTLNMADLAVRldELPSGTRTALFAVLLVA 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 102 ISMKLGLVPFHFWFPEVLQGSPM-TTSLLLSTVMKLPPIALLYMTT-----PSLNpTLLTTMAVLSTALGGWMGLNQTQV 175
Cdd:PRK12665 219 FGIKAAVFPLSFWLPDSYPTAPApVTAVFAGLLTKVGVYAIIRTHTllfpgGGLD-TLLMVVALLTMVVGILGAIAQSDI 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 176 RKILAFSSISHLGWMAIIIVYNPKLTLLNFYLYS----LMTAAVFLTLNSIK----ALKLSTLMTAWAKMPSLSAMLMLT 247
Cdd:PRK12665 298 KRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVGLIErqagSSSLRRLGGLAKASPLLAVLFFVP 377
|
250 260
....*....|....*....|.
gi 2371279358 248 LLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 378 ALNLGGIPPFSGFIGKVALLE 398
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
81-271 |
2.22e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 39.89 E-value: 2.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 81 TGQWDITQM----TNSTACLI--LTAAISmKLGLVPFHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTPSL--NPT 152
Cdd:MTH00066 191 TNSWELQQIfllnDNSTLPLLglILAAAG-KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLenNQT 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 153 LLTT---MAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYN-PKLTLLNFYLYSLMTAAVFLTLNSI------ 222
Cdd:MTH00066 270 ALTIclcLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNqPQLAFFHICTHAFFKAMLFLCSGSIihslnd 349
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2371279358 223 --KALKLSTLMTAwakMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELT 271
Cdd:MTH00066 350 eqDIRKMGGLQKA---LPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMN 397
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-268 |
3.05e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 39.49 E-value: 3.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 50 PRAIEAATKYFLVQAAASVLVLFSSTVNAWQTGQWDITQM--TNSTACLILTAAISMKLGLVPFHFWFPEVLQGSPMTTS 127
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIagLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGS 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 128 LLLSTVMKLPPIALLYMTTPSLNptLLTTMAVLSTALGGWMGLNQTQVRKILAFSSISHLGWMAIIIVYNPKLTL----- 202
Cdd:PRK12668 219 VFLSAFTTKTAVYALARAFPGTE--LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAIngava 296
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2371279358 203 --LNFYLYS---LMTA-AVFLTLNSIKALKLSTLmtaWAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12668 297 haFNHILYKgllFMSAgAVLYRTGTEKLTELGGL---YRSMPLTALFCLVGALSISAFPLFSGFVSKSMIIS 365
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
148-267 |
4.52e-03 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 38.99 E-value: 4.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 148 SLNPTLLTTMAVLS--TAL-GGWMGLNQTQVRKILAFSSISHLGWM---AIIIVYnpkltllNFYLYSLMTAAVFltlns 221
Cdd:PRK06590 275 ELSPEALLFVAIVGavTALfAAFIGLVQTDIKRVLAYSTMSQLGYMflaLGVGAY-------AAAIFHLMTHAFF----- 342
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2371279358 222 iKA-LKLS--TLMTA-------------WAKMPSLSAMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK06590 343 -KAlLFLGagSVIHAmhheqdirkmgglRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEIL 403
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
111-302 |
9.88e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 37.64 E-value: 9.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 111 FHFWFPEVLQGSPMTTSLLLSTVMKLPPIALLYMTTP--SLNPTLLTTMAVLS--TAL-GGWMGLNQTQVRKILAFSSIS 185
Cdd:MTH00208 255 LHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPliSNSPWFLSLCLILGslTALfAASTAISQHDIKKIIAYSTTS 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2371279358 186 HLGWMAIII-VYNPKLTLLNFYLYSLMTAAVFLTLNSI-----------KALKLSTLMtawakmPSLSAMLMLTLLSLAG 253
Cdd:MTH00208 335 QLGLMVVAIgLNQPNLALFHICTHAFFKAMLFLCSGSIihslnneqdlrKMGGLSFLL------PVTSSCIILGSLALMG 408
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2371279358 254 LPPLTGFLPKWLIIQeltkqemapvATIISMLSLLGLFfylrLAYCATI 302
Cdd:MTH00208 409 TPFLAGFYSKDLILE----------AGLASISNLLSII----LALIATL 443
|
|
| |
