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Conserved domains on  [gi|2431123048|gb|WCB27176|]
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chaperone protein DnaJ, partial [Yersinia enterocolitica]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 11484931)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0009408|GO:0005524|GO:0006457
PubMed:  8016869|15063739|19060069
SCOP:  4002149|4003813

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-231 1.30e-177

chaperone protein DnaJ; Provisional


:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 491.97  E-value: 1.30e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK10767  132 GVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEK 211

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVK 160
Cdd:PRK10767  212 TLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVK 291

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2431123048 161 LKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEESfvGAAGEKNSPRSK 231
Cdd:PRK10767  292 LKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEFEES--FESGEKHSPKSK 360
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-231 1.30e-177

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 491.97  E-value: 1.30e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK10767  132 GVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEK 211

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVK 160
Cdd:PRK10767  212 TLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVK 291

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2431123048 161 LKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEESfvGAAGEKNSPRSK 231
Cdd:PRK10767  292 LKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEFEES--FESGEKHSPKSK 360
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 1-218 1.37e-122

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 351.90  E-value: 1.37e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ----GFFTVQQACPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:TIGR02349 133 GVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQgtpfGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRV 212

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLD 156
Cdd:TIGR02349 213 KERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLD 292

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2431123048 157 GRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEESF 218
Cdd:TIGR02349 293 GDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKELLEELAEAS 354
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
 1-200 2.10e-95

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 277.60  E-value: 2.10e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKsK 80
Cdd:pfam01556  15 GCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVRRQFGFFSTCTCCPCCGGGGKIIDKCCKCCGGGGVVEK-K 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVK 160
Cdd:pfam01556  94 TLEVKIPAGVDDGQRIRLRGEGDAGENGGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALLGGTIEVPTLDGKVK 173

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 2431123048 161 LKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETP 200
Cdd:pfam01556 174 LKIPAGTQPGTVLRLKGKGMPRLKGGGRGDLYVTVKVEVP 213
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
 75-203 7.31e-69

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 208.43  E-value: 7.31e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  75 RVEKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPT 154
Cdd:cd10747    30 RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPT 109

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 2431123048 155 LDGRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHL 203
Cdd:cd10747   110 LGGKVKLKIPPGTQPGTVLRLKGKGMPRLRGGGRGDLYVEVKVEFPKKL 158
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-231 1.30e-177

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 491.97  E-value: 1.30e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK10767  132 GVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEK 211

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVK 160
Cdd:PRK10767  212 TLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVK 291

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2431123048 161 LKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEESfvGAAGEKNSPRSK 231
Cdd:PRK10767  292 LKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEFEES--FESGEKHSPKSK 360
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 1-218 1.37e-122

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 351.90  E-value: 1.37e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ----GFFTVQQACPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:TIGR02349 133 GVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQgtpfGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRV 212

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLD 156
Cdd:TIGR02349 213 KERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLD 292

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2431123048 157 GRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEESF 218
Cdd:TIGR02349 293 GDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKELLEELAEAS 354
PRK14280 PRK14280
molecular chaperone DnaJ;
1-216 7.56e-109

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 317.82  E-value: 7.56e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ----GFFTVQQACPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:PRK14280  133 GKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQntpfGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKV 212

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLD 156
Cdd:PRK14280  213 RKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLH 292

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048 157 GRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEE 216
Cdd:PRK14280  293 GKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLTDRQKELLREFAE 352
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 1-231 9.68e-99

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 291.67  E-value: 9.68e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK14294  134 GTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSK 213

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVK 160
Cdd:PRK14294  214 TVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERE 293

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2431123048 161 LKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEESFVGAAGEK--NSPRSK 231
Cdd:PRK14294  294 LKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTEFARLESEKIGNKlrNLFKSK 366
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 1-216 1.50e-98

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 292.09  E-value: 1.50e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ----GFFTVQQACPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:PRK14277  145 GTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQntpfGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRI 224

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLD 156
Cdd:PRK14277  225 RRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLD 304

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048 157 GRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEE 216
Cdd:PRK14277  305 GKVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTEKQKELLREFEK 364
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 1-226 9.73e-96

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 284.67  E-value: 9.73e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ----GFFTVQQACPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:PRK14276  136 GKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTqtplGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHE 215

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLD 156
Cdd:PRK14276  216 KQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVH 295

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048 157 GRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLREleesFVGAAGEKN 226
Cdd:PRK14276  296 GDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLNDAQKEALKA----FAKASGEKD 361
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
 1-200 2.10e-95

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 277.60  E-value: 2.10e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKsK 80
Cdd:pfam01556  15 GCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVRRQFGFFSTCTCCPCCGGGGKIIDKCCKCCGGGGVVEK-K 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVK 160
Cdd:pfam01556  94 TLEVKIPAGVDDGQRIRLRGEGDAGENGGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALLGGTIEVPTLDGKVK 173

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 2431123048 161 LKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETP 200
Cdd:pfam01556 174 LKIPAGTQPGTVLRLKGKGMPRLKGGGRGDLYVTVKVEVP 213
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 1-231 3.68e-95

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 282.89  E-value: 3.68e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQV-HMRQ---GFFTVQQACPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:PRK14298  131 GVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVtTTRStplGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKV 210

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLD 156
Cdd:PRK14298  211 RKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLY 290

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431123048 157 GRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEESFVGAAGEKNSPRSK 231
Cdd:PRK14298  291 GKVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREFDELSNGKNPSKAGKKKK 365
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 1-216 2.26e-88

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 265.92  E-value: 2.26e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQG-----FFTVQQaCPTCHGSGQIIKDPCNKCHGHGR 75
Cdd:PRK14283  136 GVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNtilgqMMNVTT-CPDCQGEGKIVEKPCSNCHGKGV 214

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  76 VEKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTL 155
Cdd:PRK14283  215 VRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTI 294

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2431123048 156 DGRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEE 216
Cdd:PRK14283  295 DGPVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVKVKVVVPKKLSPKQKELLREFAS 355
PRK14297 PRK14297
molecular chaperone DnaJ;
1-231 7.99e-87

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 262.03  E-value: 7.99e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQV-HMRQ---GFFTVQQACPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:PRK14297  138 GVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIrVQRNtplGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKV 217

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLD 156
Cdd:PRK14297  218 RKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVD 297

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431123048 157 GRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLREleesFVGAAGEKNSPRSK 231
Cdd:PRK14297  298 GEVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLNSKQKEALTM----FMEASGETVDGKEK 368
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 5-216 1.41e-84

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 255.82  E-value: 1.41e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   5 EIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSKTLSV 84
Cdd:PRK14301  138 TLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKV 217

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  85 KIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVP 164
Cdd:PRK14301  218 RIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIP 297

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2431123048 165 AETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEE 216
Cdd:PRK14301  298 KGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELLREFEA 349
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 1-216 2.97e-82

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 249.93  E-value: 2.97e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK14300  135 GIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQR 214

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLD-GRV 159
Cdd:PRK14300  215 NLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEgGKV 294

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2431123048 160 KLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEE 216
Cdd:PRK14300  295 NLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQRELLEEFKK 351
PRK14293 PRK14293
molecular chaperone DnaJ;
1-214 3.93e-82

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 249.52  E-value: 3.93e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVhmRQ------GFFTVQQACPTCHGSGQIIKDPCNKCHGHG 74
Cdd:PRK14293  133 GGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQV--RRatrtpfGSFTQVSECPTCNGTGQVIEDPCDACGGQG 210

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  75 RVEKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPT 154
Cdd:PRK14293  211 VKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDT 290

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2431123048 155 LDGRVKLKVPAETQTGKLFRMRGKGVKsvRGG---SQGDLLCRVVVETPVHLSEKQKQLLREL 214
Cdd:PRK14293  291 VDGPVELTIPAGTQPNTVLTLENKGVP--RLGnpvARGDHLITVKVKIPTRISDEERELLEKL 351
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 1-226 4.38e-82

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 249.54  E-value: 4.38e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ----GFFTVQQACPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:PRK14287  128 GKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQntpfGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKV 207

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLD 156
Cdd:PRK14287  208 RKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLN 287

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048 157 GRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEESFVGAAGEKN 226
Cdd:PRK14287  288 GKVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELMREFAGMSGGRPDEQN 357
PRK14279 PRK14279
molecular chaperone DnaJ;
1-230 3.57e-80

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 245.41  E-value: 3.57e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK14279  163 GVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTR 242

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVK 160
Cdd:PRK14279  243 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVG 322

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2431123048 161 LKVPAETQTGKLFRMRGKGVKSvRGGSQGDLLCRVVVETPVHLSEKQKQLLRELeesfvgAAGEKNS---PRS 230
Cdd:PRK14279  323 VKVPAGTADGRILRVRGRGVPK-RSGGAGDLLVTVKVAVPPNLDGAAAEALEAY------AEAERASgfdPRA 388
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 1-231 2.58e-79

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 243.21  E-value: 2.58e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK14284  148 GVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKR 227

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTL--DGR 158
Cdd:PRK14284  228 SVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLlkEGT 307

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2431123048 159 VKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLREleesFVGAAGEKNSPRSK 231
Cdd:PRK14284  308 CRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLRQ----FAATEKAENFPKKR 376
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 1-225 1.74e-78

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 240.28  E-value: 1.74e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK14286  140 GREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRR 219

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGR-V 159
Cdd:PRK14286  220 TINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKkA 299

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2431123048 160 KLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLREleesFVGAAGEK 225
Cdd:PRK14286  300 KMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQRELIEE----FARESGEN 361
PRK14295 PRK14295
molecular chaperone DnaJ;
1-230 2.32e-77

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 237.82  E-value: 2.32e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK14295  156 GATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSR 235

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGR-V 159
Cdd:PRK14295  236 TMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPpV 315

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2431123048 160 KLKVPAETQTGKLFRMRGKGVKSvRGGSQGDLLCRVVVETPVHLSEKQkqllRELEESFVGAAGEKNsPRS 230
Cdd:PRK14295  316 TVKLPPGTPNGRVLRVRGKGAVR-KDGTRGDLLVTVEVAVPKDLSGKA----REALEAFREATADED-PRA 380
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 1-216 1.93e-76

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 235.33  E-value: 1.93e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQ----QACPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:PRK14278  129 GVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQvmtsRPCPTCRGVGEVIPDPCHECAGDGRV 208

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTL- 155
Cdd:PRK14278  209 RARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAIl 288

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2431123048 156 DGRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEE 216
Cdd:PRK14278  289 DGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHEDIELLRELKA 349
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 1-216 3.64e-72

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 224.26  E-value: 3.64e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGqIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK14291  146 GTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEG-VLREPCSKCNGRGLVIKKE 224

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG-RV 159
Cdd:PRK14291  225 TIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGkKE 304

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431123048 160 KLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETP--------VHLSEKQKQLLRELEE 216
Cdd:PRK14291  305 KVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVPkismlsklMGDGKKAKKLLKELDK 369
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
 75-203 7.31e-69

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 208.43  E-value: 7.31e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  75 RVEKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPT 154
Cdd:cd10747    30 RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPT 109

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 2431123048 155 LDGRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHL 203
Cdd:cd10747   110 LGGKVKLKIPPGTQPGTVLRLKGKGMPRLRGGGRGDLYVEVKVEFPKKL 158
PRK14289 PRK14289
molecular chaperone DnaJ;
1-217 2.52e-65

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 206.99  E-value: 2.52e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ----GFFTVQQACPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:PRK14289  144 GVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQntilGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIV 223

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLD 156
Cdd:PRK14289  224 YGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTID 303

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2431123048 157 GRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEES 217
Cdd:PRK14289  304 GKAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKEEKQTLEKMENS 364
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 5-224 3.07e-63

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 201.27  E-value: 3.07e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   5 EIRIPTLNECDVCHGSGAKPGSSP-VTCSTCRGAGQVHMR-QGFFTV---QQACPTCHGSGQIIKDPCNKCHGHGRVEKS 79
Cdd:PRK14292  133 EVEVDRLTECEHCHGSRTEPGGKPpKTCPTCRGAGAVRAQaRTIFGVvetQQPCPTCRGEGQIITDPCTVCRGRGRTLKA 212

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  80 KTLSVKIPAGVDTGDRIRLSGEGEAGEHGApaGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRV 159
Cdd:PRK14292  213 ETVKVKLPRGIDEGYRIRVAGMGNEGPGGN--GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQ 290

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431123048 160 KLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLreleESFVGAAGE 224
Cdd:PRK14292  291 VIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREAL----EAYARAVGD 351
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 13-214 1.60e-62

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 199.25  E-value: 1.60e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  13 ECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ----GFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSKTLSVKIPA 88
Cdd:PRK14282  154 TCPHCGGTGVEPGSGYVTCPKCHGTGRIREERrsffGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA 233

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  89 GVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVK-LKVPAET 167
Cdd:PRK14282  234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTmLKIPPGT 313

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2431123048 168 QTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLREL 214
Cdd:PRK14282  314 QPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKEL 360
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 1-217 1.91e-62

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 200.03  E-value: 1.91e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPvTCSTCRGAGQVhmRQ------GFFTVQQACPTCHGSGQIIKDPCNKCHGHG 74
Cdd:PRK14281  153 GVEKTLKIKKQVPCKECNGTGSKTGATE-TCPTCHGSGEV--RQasktmfGQFVNITACPTCGGEGRVVKDRCPACYGEG 229

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  75 RVEKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPT 154
Cdd:PRK14281  230 IKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPT 309

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2431123048 155 LDGRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEES 217
Cdd:PRK14281  310 LDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSHQDKELLKELKKS 372
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 1-214 5.36e-56

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 182.44  E-value: 5.36e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSpVTCSTCRGAGQ--VHMRQGFF---TVQQaCPTCHGSGQIIKDPCNKCHGHGR 75
Cdd:PRK14290  139 GTEKRIKYRRNAMCPDCSGTGAKNGKL-ITCPTCHGTGQqrIVRGQGFFrmvTVTT-CRTCGGRGRIPEEKCPRCNGTGT 216

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  76 VEKSKTLSVKIPAGVDTGDRIRLSGEGEAgeHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTL 155
Cdd:PRK14290  217 VVVNEDISVKIPKGATDNLRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLF 294

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2431123048 156 DGRVKLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLREL 214
Cdd:PRK14290  295 REKYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF 353
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 1-214 3.17e-49

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 164.78  E-value: 3.17e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK14285  136 GYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKE 215

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGR-V 159
Cdd:PRK14285  216 TIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKkI 295

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2431123048 160 KLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLREL 214
Cdd:PRK14285  296 KIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLLENL 350
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 1-216 5.08e-48

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 162.04  E-value: 5.08e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ--GFFTVQQA--CPTCHGSGQIIKDPCNKCHGHGRV 76
Cdd:PRK14296  139 GVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKnmGFFQFQQSakCNVCNGAGKIIKNKCKNCKGKGKY 218

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  77 EKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNN-LYCEVPINFAMAALGGEIEVPTL 155
Cdd:PRK14296  219 LERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNdILMTYNISYLDAILGNEIIIKTL 298

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2431123048 156 DGRVKLKVPAETQTGKLFRMRGKGV-KSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEE 216
Cdd:PRK14296  299 DGDIKYKLPKSINSNELIIINNKGLyKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYE 360
PRK14288 PRK14288
molecular chaperone DnaJ;
1-224 1.26e-43

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 150.22  E-value: 1.26e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAKPGSSPvTCSTCRGAGQVHMRQGFFTVQQACPTCHGSGQIIKDPCNKCHGHGRVEKSK 80
Cdd:PRK14288  130 GCKKTIKVQYQSVCESCDGTGAKDKALE-TCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDE 208

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  81 TLSVKIPAGVDTGDRIRLSGEGEAGEHGApAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG-RV 159
Cdd:PRK14288  209 EIDAIIPEGIDDQNRMVLKNKGNEYEKGK-RGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGdEL 287

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431123048 160 KLKVPAETQTGKLFRMRGKGVKSVRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEESFvGAAGE 224
Cdd:PRK14288  288 ELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQELLEKLHASF-GYEGE 351
PRK10266 PRK10266
curved DNA-binding protein;
74-217 1.76e-38

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 135.33  E-value: 1.76e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  74 GRVEK--SKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIE 151
Cdd:PRK10266  150 GMIEQeiPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVT 229

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2431123048 152 VPTLDGRVKLKVPAETQTGKLFRMRGKGVKSVRGgsQGDLLCRVVVETPVHLSEKQKQLLRELEES 217
Cdd:PRK10266  230 VPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQ--TGDLYAVLKIVMPPKPDEKTAALWQQLADA 293
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 82-218 1.21e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 114.65  E-value: 1.21e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  82 LSVKIPAGVDTGDRIRLSGEGEAGehgapaGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKL 161
Cdd:PRK14299  158 LSVRIPPGVREGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEV 231

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2431123048 162 KVPAETQTGKLFRMRGKGVKSvRGGSQGDLLCRVVVETPVHLSEKQKQLLRELEESF 218
Cdd:PRK14299  232 TIPPRTQAGRKLRLKGKGWPR-GPAGRGDQYAEVRITIPTRPTPEEERLYKQLAELY 287
DnaJ_CXXCXGXG pfam00684
DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four ...
 14-74 3.85e-28

DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found.


Pssm-ID: 459904 [Multi-domain]  Cd Length: 65  Bit Score: 101.48  E-value: 3.85e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431123048  14 CDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ----GFFTVQQACPTCHGSGQIIKDPCNKCHGHG 74
Cdd:pfam00684   1 CPTCNGSGAKPGTKPTTCPTCGGTGQVRRVQqtgpGFFQMQSTCPTCGGTGKIIKDPCKKCKGKG 65
DnaJ_zf cd10719
Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of ...
 14-74 1.29e-26

Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.


Pssm-ID: 199908 [Multi-domain]  Cd Length: 65  Bit Score: 97.33  E-value: 1.29e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431123048  14 CDVCHGSGAKPGSSPVTCSTCRGAGQVHMRQ----GFFTVQQACPTCHGSGQIIKDPCNKCHGHG 74
Cdd:cd10719     1 CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQgtgfGFFQTQTTCPTCGGTGKIIKDPCPKCKGKG 65
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 1-214 1.42e-23

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 97.58  E-value: 1.42e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048   1 GVTKEIRIPTLNECDVCHGSGAkPGSSPVTCSTCRGAG-QVHMRQGFFTVQQA---CPTCHGSGQII--KDPCNKCHGHG 74
Cdd:PTZ00037  140 GAMRKLAINKDVICANCEGHGG-PKDAFVDCKLCNGQGiRVQIRQMGSMIHQTqstCNSCNGQGKIIpeSKKCKNCSGKG 218

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431123048  75 RVEKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPaGDLYVQVQVKAHPIFEREGNNLYCEVPINFAMAALGGEIEVPT 154
Cdd:PTZ00037  219 VKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIP-GNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITH 297

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2431123048 155 LDGRvKLKV---PAE-TQTGKLFRMRGKGVKSVRGG-SQGDLLCRVVVETPVH--LSEKQKQLLREL 214
Cdd:PTZ00037  298 LDGR-KLLVntpPGEvVKPGDIKVINNEGMPTYKSPfKKGNLYVTFEVIFPVDrkFTNEEKEILKSL 363
phage_xxxx TIGR02642
uncharacterized phage protein; This uncharacterized protein is found in prophage regions of ...
 51-94 2.63e-03

uncharacterized phage protein; This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q. [Mobile and extrachromosomal element functions, Prophage functions]


Pssm-ID: 274243 [Multi-domain]  Cd Length: 186  Bit Score: 37.55  E-value: 2.63e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2431123048  51 QACPTCHGSGQIIK--DPCNKCHGHGRVEK-----SKTLSVKIPAGVDTGD 94
Cdd:TIGR02642 100 CKCPRCRGTGLIQRrqRECDTCAGTGRFRPtvedlLKSFGVDSGAAIVLKD 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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