|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 730.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 1 MLKIIAPTAMLLPLAILSPRKHLWTNITLYSLLIATMSLQWLTPTYYPNKGLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 81 QNHLEQEPINRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 161 LIAILHLHNQIGSLYLPMLKLSHPTLNSSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 241 YGIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAI 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584269 401 LLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELISGI 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 607.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 1 MLKIIAPTAMLLPLAILSPRKHLWTNITLYSLLIATMSLQWLTPTYYPNKGLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 81 QNHLEQEPINRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 161 LIAILHLHNQIGSLYLPMLKLSHPTLNSSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 241 YGIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAI 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584269 401 LLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELISGI 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 590.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 1 MLKIIAPTAMLLPLAILSPRKHLWTNITLYSLLIATMSLQWLTPTYYPNKGLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 81 QNHLEQEPINRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 161 LIAILHLHNQIGSLYLPMLKLSHPTLNSSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 241 YGIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAI 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584269 401 LLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELISGI 457
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGP 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
2.36e-176 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 501.79 E-value: 2.36e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 1 MLKIIAPTAMLLPLAILSPRKHLWTNITLYSLLIATMSLQWLT-PTYYPNKGLTPWTSIDQISSPLLVLSCWLLPLMIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 80 SQNHLEQEPINRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 160 LLIAILHLHNQIGSLYLPMLKLSHPTLNSSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 240 GYGIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 320 GLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584269 400 ILLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELISG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
4.96e-160 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 459.79 E-value: 4.96e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 3 KIIAPTAMLLPLAILSPRKHLWTNITLYSLLIATMSLQWL-TPTYYPNKGLTPWTSIDQISSPLLVLSCWLLPLMIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFkWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 82 NHLEQEPINRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 162 IAILHLHNQIGSLYLPMLKLSHPTlnsSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 242 GIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 322 TSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAIL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2445584269 402 LTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.18e-145 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 423.62 E-value: 1.18e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 1 MLKIIAPTAMLLPLAILSPRKHLWTNITLYSLLIATMSLQWLTPTYYpnkglTPWTSI------DQISSPLLVLSCWLLP 74
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWS-----SSWHNLslslatDSLSSPLIILSCWLAP 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 75 LMIMASQNHLEQEPINRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTL 154
Cdd:MTH00044 76 LSLLASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 155 ASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLNSSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAAL 234
Cdd:MTH00044 156 FGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAI 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 235 LLKLGGYGIMR-ITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAM 313
Cdd:MTH00044 236 LLKLGGYGLIRlINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGAL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 314 ILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTI 393
Cdd:MTH00044 316 ILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSF 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2445584269 394 ILTGTAILLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELIS 455
Cdd:MTH00044 396 PIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
1.06e-115 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 346.76 E-value: 1.06e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 1 MLKIIAPTAMLLPLAILSprKHLWTNITLYSLLIATMSLQWLTPTYYPNKGLtpWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLK--NSWWLVQSLLFLLSFLFMLLFSLSFYFSNISY--FFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 81 QNHLEQepINRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00163 77 ESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 161 LIAILHLHNQIGSLYLPMLKlshptlNSSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLN------FFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 241 YGIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAI 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2445584269 401 LLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
55-457 |
7.05e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 333.34 E-value: 7.05e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 55 WTSIDQISSPLLVLSCWLLPLMIMASQNhlEQEPINRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILIT 134
Cdd:MTH00150 19 LFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLIL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 135 RWGSQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLNSSWSglaASLALLLAFMVKAPLYGLHL 214
Cdd:MTH00150 97 GWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGL---WGLLVFLAFLVKLPMYPFHL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHM 294
Cdd:MTH00150 174 WLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHM 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 295 GLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTN 374
Cdd:MTH00150 254 SLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 375 LMAELTIVIALFNWSAFTIILTGTAILLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELI 454
Cdd:MTH00150 334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
...
gi 2445584269 455 SGI 457
Cdd:MTH00150 414 FMW 416
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.57e-108 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 328.62 E-value: 1.57e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 1 MLKIIAPTAMLLPLAILSpRKHLWTNITLYSLLIATMSLQWLTPTYYPNKGLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIK-YPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 81 QNHLEQEpiNRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00014 80 FKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 161 LIAILHLHNQIGSLYLPMLKLSHPTLNSSwsgLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 241 YGIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAI 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2445584269 401 LLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELIS 455
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
2.28e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 312.68 E-value: 2.28e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 57 SIDQISSPLLVLSCWLLPLMIMASQNHLEQEpiNRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:MTH00205 54 SFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGW 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 137 GSQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLylpMLKLSHPTLNSSWSGLAASLALLLAFMVKAPLYGLHLWL 216
Cdd:MTH00205 132 GYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSL---SMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGL 296
Cdd:MTH00205 209 PKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 297 VVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLM 376
Cdd:MTH00205 289 MVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLA 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2445584269 377 AELTIVIALFNWSAFTIILTGTAILLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELI 454
Cdd:MTH00205 369 SEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
1.45e-72 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 230.66 E-value: 1.45e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 112 ASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLNSSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 192 GLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPFITLALWGALM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 272 TSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLA-NTNYERTHSRILLLTRGLQP 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2445584269 351 LLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGT 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
58-457 |
5.21e-71 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 232.66 E-value: 5.21e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 58 IDQISSPLLVLSCWLLPLMIMASQNHLEqepiNRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:COG1008 80 VDGISLPLVLLTALLTPLAILASWNEIK----KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 138 SQlERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLNSSWsGLAASLALLLAFMVKAPLYGLHLWLP 217
Cdd:COG1008 156 GE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTA-QLLLFLAFFIAFAVKVPMFPFHTWLP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPS-SNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGL 296
Cdd:COG1008 234 DAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 297 VVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLM 376
Cdd:COG1008 314 VLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFV 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 377 AELTIVIALFNWSAFTIILTGTAILLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPELISG 456
Cdd:COG1008 394 GEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLD 473
|
.
gi 2445584269 457 I 457
Cdd:COG1008 474 L 474
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
58-449 |
4.39e-61 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 206.98 E-value: 4.39e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 58 IDQISSPLLVLSCWLLPLMIMASQNHLEqepiNRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:PRK05846 80 VDGISLLLVVLTALLTPLAVLASWEEIK----KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 138 SqLERLNAGIYLLFYTLASSLPLLIAILHL----HNQIGS---LYLPMLKLSHPTLNSSWSGLAASlalllaFMVKAPLY 210
Cdd:PRK05846 156 G-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTfdiADLLNLPLPPGVQYWLFLAFFIA------FAVKMPMF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 211 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHP-SSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYS 289
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 290 SVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMAL 369
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 370 PPTTNLMAELTIVIALFNWSAFTIILTGTAILLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMAlhmiPMMLLIL 449
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILL----PLVALLL 464
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-454 |
1.32e-60 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 205.17 E-value: 1.32e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 57 SIDQISSPLLVLSCWLLPLMIMASQNHLEqepiNRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 137 GSQlERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSL--YLPMLKLSHPTLNSSWsglaASLALLLAFMVKAPLYGLHL 214
Cdd:TIGR01972 150 GGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdLLELLNLPLPFGVQTW----LFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHP-SSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSH 293
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 294 MGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTT 373
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 374 NLMAELTIVIALFNWSAFTIILTGTAILLTASYTLYMLMMTQRGPLP-SHITSIQNSSTREHLLMALHMIPMMLLILKPE 452
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGREIAVLAPLVVLILFLGLYPN 464
|
..
gi 2445584269 453 LI 454
Cdd:TIGR01972 465 PL 466
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
7.61e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 200.67 E-value: 7.61e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 57 SIDQISSPLLVLSCWLLPLMIMASQNHLEQepinRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 137 GSQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSL-YLPMLKLSHPTLNSSWsglaASLALLLAFMVKAPLYGLHLW 215
Cdd:MTH00204 156 GSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKW----LLVGFFLSLAVKIPQIPFHIW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPFITL-----ALWGALMTSaiclRQIDLKSLIAYSS 290
Cdd:MTH00204 232 LPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMlsviaVIYGSLTTC----RQVDFKRLIAYSS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 291 VSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALP 370
Cdd:MTH00204 308 VAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 371 PTTNLMAELTIVIALFNWSAFTIILTGTAILLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILK 450
Cdd:MTH00204 388 LSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIV 467
|
....
gi 2445584269 451 PELI 454
Cdd:MTH00204 468 PFII 471
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
8.23e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 187.82 E-value: 8.23e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 57 SIDQISSPLLVLSCWLLPLMIMASQNHLEQepinRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 137 GSQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSL-YLPMLKLSH--PTLNSSWsglaASLALLLAFMVKAPLYGLH 213
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCSHvvSEQTQKW----IFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHP-SSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVS 292
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 293 HMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPT 372
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 373 TNLMAELTIVIALFNWSAFTIILTGTAILLTASYTLYMLMMTQRGPLPSHITSIQNSSTREHLLMALHMIPMMLLILKPE 452
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPI 490
|
..
gi 2445584269 453 LI 454
Cdd:MTH00226 491 FI 492
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
58-410 |
7.05e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 182.17 E-value: 7.05e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 58 IDQISSPLLVLSCWLLPLMIMASQNHLEQepinRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:MTH00217 78 VDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 138 SQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSL---YLPMLKLSHPTLNSSWSGLAASlalllaFMVKAPLYGLHL 214
Cdd:MTH00217 154 SREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTdyqALCCLKIEKELQYFIFLGFFLS------LAIKIPKIPFHI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPFI-TLALWGALMTSAICLRQIDLKSLIAYSSVSH 293
Cdd:MTH00217 228 WLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAH 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 294 MGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTT 373
Cdd:MTH00217 308 MGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSC 387
|
330 340 350
....*....|....*....|....*....|....*..
gi 2445584269 374 NLMAELTIVIALFNWSAFTIILTGTAILLTASYTLYM 410
Cdd:MTH00217 388 NFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
104-412 |
4.45e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 159.30 E-value: 4.45e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 104 LFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPLLIAILHlhnqigslYLPMLKLSH 183
Cdd:MTH00094 73 LICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSLCY 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 184 PTLNSSWsglAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLhypFIT 263
Cdd:MTH00094 145 FDFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNF---WII 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 264 LALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILL 343
Cdd:MTH00094 219 FSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIY 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2445584269 344 LTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAILLTASYTLYMLM 412
Cdd:MTH00094 299 FMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-411 |
1.21e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 149.03 E-value: 1.21e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 48 PNKGLTPWTSIDQISSPLLVLSCWLLPLMIMASQNhleqepINRK-RAFASTVILAQLFILLAFSASELMLFYIAFEATL 126
Cdd:PRK12561 47 PQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWK------VTRKpRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELEL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 127 IPTLILITRWGSQlERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLnSSWSGLAASLALLLAFMVK 206
Cdd:PRK12561 121 VPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSY-PLALELLLYAGFLIAFGVK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 207 APLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYP-FITLA----LWGALMTSAiclrQID 281
Cdd:PRK12561 199 LPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGvvniIYGALNAFA----QDN 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 282 LKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLL 361
Cdd:PRK12561 275 VKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTA 354
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584269 362 ANLTNMALPPTTNLMAELTIVIALFNWSAF-------TIILTGTAILLTASYTLYML 411
Cdd:PRK12561 355 SSMASLALPGMSGFVSELTVFLGITSSDVYsstfrtiTILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-415 |
3.39e-36 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 138.36 E-value: 3.39e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 58 IDQISSPLLVLSCWLLPLMIMASQNHLEQEPinRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 138 SQlERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLNSSWSgLAASLALLLAFMVKAPLYGLHLWLP 217
Cdd:COG0651 152 TK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLL-LAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPS--SNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMG 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGAdpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 296 LVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNL 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2445584269 376 MAELTIVIALFN----WSAFTIILTGtaiLLTASYTLYMLMMTQ 415
Cdd:COG0651 390 VSKWLLLQAALEagawLLAAVLLLSS---LLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-457 |
9.00e-34 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 132.91 E-value: 9.00e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 45 TYYPNKGLTPWTSIDQISSPLLVLSCWLLPLMIMASQnhleqePINRKRAFASTVILAQLFILLA-FSASELMLFYIAFE 123
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTFKPKLFYFLMLAMYGGQIAvFAVQDMLLFFLAWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 124 ATLIPTLILITRWGSQlERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLNSSWSgLAASLALLLAF 203
Cdd:PRK02546 146 LELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAY 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 204 MVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYP-FITLALWGALMTSAICLRQIDL 282
Cdd:PRK02546 224 GVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 283 KSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLA 362
Cdd:PRK02546 304 KRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTAC 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 363 NLTNMALPPTTNLMAELTIVIALFNWSAFT-------IILTGTAILLTASYTLYMLMMTQRGPLPSHITSIQN---SSTR 432
Cdd:PRK02546 384 SLASLALPGMSGFVAELMVFVGFATSDAYTlpfrvvvVFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEKlvdAEPR 463
|
410 420
....*....|....*....|....*
gi 2445584269 433 EHLLMALHMIPMMLLILKPELISGI 457
Cdd:PRK02546 464 EVFIIACLLVPIIGIGLYPKLVTQS 488
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
36-426 |
1.78e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 126.35 E-value: 1.78e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 36 TMSLQWLTPTyypnkGLTPWTSIDQISSPLLVLSCWLLPLMIMASQnhleqEPINRKRAFASTVILAQLFILLAFSASEL 115
Cdd:PRK06473 60 TEFIPWIDSL-----GLSYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 116 MLFYIAFEATLIPTLILITRWGSQlERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLNSSwSGLAA 195
Cdd:PRK06473 130 LLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 196 SLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPFI-TLALWGALMTSA 274
Cdd:PRK06473 208 LAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGAS 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 275 ICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL---QPL 351
Cdd:PRK06473 288 CAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERG 367
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2445584269 352 LPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAILLTASYTLYMLMMTQRGPLPSHITSI 426
Cdd:PRK06473 368 LPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
51-422 |
1.10e-29 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 120.97 E-value: 1.10e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 51 GLTPWTSIDQISSPLLVLSCWLLPLMIMASQnhleqEPINRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTL 130
Cdd:PRK07363 70 GLSYSLGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFY 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 131 ILITRWGSQlERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLNSSwSGLAASLALLLAFMVKAPLY 210
Cdd:PRK07363 145 LLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 211 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPfiTLALWGA---LMTSAICLRQIDLKSLIA 287
Cdd:PRK07363 223 PLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisvIYGALSAIAQKDIKRMVA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 288 YSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL-QPL--LPLMATWWLLANL 364
Cdd:PRK07363 301 YSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGM 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2445584269 365 TNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAILLTASYTLYMLMMTQRGPLPSH 422
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-411 |
1.47e-27 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 114.66 E-value: 1.47e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 110 FSASELMLFYIAFEATLIPTLILITRWGSQlERLNAGIYLLFYTLASSLPLLIAILHLhnqigSLYLPmlklSHPTLNSS 189
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGM-----GLYGS----NEPTLNFE 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 190 WSG---------LAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYP 260
Cdd:CHL00011 199 TLAnqsypvaleILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSP 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 261 FitLALWGALM---TSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERT 337
Cdd:CHL00011 279 W--LVIVGAIQiiyAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 338 HSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIA-------LFNWSAFTIILTGTAILLTASYTLYM 410
Cdd:CHL00011 357 RLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGiitsqkyLLMPKILITFVMAIGMILTPIYLLSM 436
|
.
gi 2445584269 411 L 411
Cdd:CHL00011 437 L 437
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
7.35e-23 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 92.97 E-value: 7.35e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 1 MLKIIAPTAMLLPLAILSPRKHLWTNITLYSLLIATMSLQWLT-PTYYPNKGLTPWTSIDQISSPLLVLSCWLLPLMIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2445584269 80 SQNHLEQEPINRKRAFASTVILAQLFILLA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-449 |
1.03e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 97.73 E-value: 1.03e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 58 IDQISSPLLVLSCWLLPLMIMASQNHLEQEpiNRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 138 SQLERLNAGI-YLLFYTLASSLpLLIAILHLHNQIGSLYLPMLKL----------SHPTLNSSWSGLAASLALLLAFMVK 206
Cdd:PRK12667 158 DRGDAVEAAIkYALIGAVGTTL-YFLALAFLYATFGTLNMADLSAkirglsfpltGGLAGNPPLALGVALALALWAFTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 207 APLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYP-------FITLALWGALMTSAICLRQ 279
Cdd:PRK12667 237 AAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFraalspiLIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 280 IDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWW 359
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 360 LLANLTNMALPPTTNLMAELTIVIALFNWSAFT---IILTGTAILLTASYTLYMLMMTQRGPlpshitSIQNSSTREHLL 436
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNALLESGFYLpalVLLIASAISLVGYFRAWYSLFFGKPK------SGEEVEHKESPS 470
|
410
....*....|...
gi 2445584269 437 MALHMIPMMLLIL 449
Cdd:PRK12667 471 MSVVILVLALAVL 483
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-406 |
1.14e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 88.40 E-value: 1.14e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 90 NRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQlERLNAG-IYLLFYTLASSLpLLIAILHLH 168
Cdd:PRK08375 103 HRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAArKYLIVGLIGSTF-LLIGVGLLY 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 169 NQIGSLYLPMLK---LSHPTLNsswsglAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMR 245
Cdd:PRK08375 181 GVTGTLNMADLAgalAENPTVV------TAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIR 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 246 ITILV----HPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGL 321
Cdd:PRK08375 255 IYFTVfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHAL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 322 TSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALF---NWSAFTIILTGT 398
Cdd:PRK08375 335 MKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVeagQWLVLAVLLASS 414
|
....*...
gi 2445584269 399 aiLLTASY 406
Cdd:PRK08375 415 --LLALLY 420
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-449 |
8.13e-14 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 73.43 E-value: 8.13e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 206 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILV--HPSSNNLHYPFITLALWGALMTSAICLRQIDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 284 SLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLAN 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 364 LTNMALPPTTNLMAELTIVIALFN---WSAFTIILTGTAILLTAsytlyMLMMTQRGPLPSHitsiqNSSTREHLLMALH 440
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAA-----LVRRVAGMVFGEP-----PEAVNRGDLGWLT 456
|
....*....
gi 2445584269 441 MIPMMLLIL 449
Cdd:PRK06458 457 TSPMFVHLV 465
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
9-386 |
1.24e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 73.23 E-value: 1.24e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 9 AMLLPLAILSPRKHLWTNI------TLYSLLIATMSLQWLTPTYYPNKGLTPWTSI----DQISSPLLVLSCWLLPLMIM 78
Cdd:PRK08667 16 AAVIPLVFRHKRKRVWQSVlwlviaIALLLFAGSLQLFTGNPLDIPLWGIAPGLDItfhiDRLAAFFIILIGLVSLCVAI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 79 ASQNHLEQEPINRKR----AFASTVILAQLFILLAFSASELMLFYiafEATLIPTLILITRWGSQLERLNAGIYLLFYTL 154
Cdd:PRK08667 96 YSLGYNEHMSSNERAnllsALTALFILSMLGVVASANTFSFLFFW---EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQ 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 155 ASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLNSSWsglaasLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAAL 234
Cdd:PRK08667 173 LSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGV 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 235 LLKLGGYGIMRitILVHPSSNNLHYPFITLAL--WGALMTSAICLRQIDLKSLIAYSSVSHMGLV-----------VAAT 301
Cdd:PRK08667 247 MLKVAVYGLVR--FLMDVLSPELWWGVLILLAgsISALLGVIYALKEHDLKGLLAYSSIENIGIIlmgiglyvifgVYGL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 302 MIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTI 381
Cdd:PRK08667 325 DTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLL 404
|
....*
gi 2445584269 382 VIALF 386
Cdd:PRK08667 405 YESFF 409
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-406 |
1.13e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 69.60 E-value: 1.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 90 NRKRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITrWGSQLERLNAGIYLLFYTLASSLPLLIAILHLHN 169
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 170 QIGSLYLPMLKLSHPTlnsswsglaASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITIL 249
Cdd:PRK07234 170 ANGTFAFSGLATADPE---------AFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 250 VhpssNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIqtqwafsgAMILMISHGLTSSMLFCL 329
Cdd:PRK07234 241 V----PGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584269 330 ANTNYERTHSRILLLTRGLQPLLPLmatwwLLANLTNMALPPTTNLMAELTIVIALFNWsaFTIILTGTAILLTASY 406
Cdd:PRK07234 309 AGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPW--QAIALNLAAVGTAASF 378
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
106-372 |
9.90e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 67.38 E-value: 9.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 106 ILLAFSASELMLFYIAFEATLIPTLILITRWGSQLErlNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLP-MLKLSHP 184
Cdd:PRK12650 123 MLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSgILHSDVW 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 185 TLNSSWSGLAASLALLLAFmVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHpSSNNLHYPFITL 264
Cdd:PRK12650 201 AEKPGLTTVVAVLIAVAAF-TKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH-DVAVWNWLLIIV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 265 ALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLL 344
Cdd:PRK12650 279 GMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRR 358
|
250 260
....*....|....*....|....*...
gi 2445584269 345 TRGLQPLLPLMATWWLLANLTNMALPPT 372
Cdd:PRK12650 359 LGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-401 |
1.32e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 66.87 E-value: 1.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 213 HLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRItilvHPSSNNLHYPFITLALWGA---LMTSAICLRQIDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLARL----NPVLGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 289 SSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMA 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 2445584269 369 LPPTTNLMAELTIVIALFNWSAFTIILTGTAIL 401
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
72-395 |
3.02e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 64.94 E-value: 3.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 72 LLPLMI-MASQNHLEQEPINRKRAFastVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLL 150
Cdd:MTH00062 52 LLVLFLgLYSQVMFYNLLSGVSRFF---LFLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 151 FYTLASSLPLLIAILHLHNQIGSLYLpmlklshptlnSSWSGLAASLALL-----LAFMVKAPLYGLHLWLPKAHVEAPI 225
Cdd:MTH00062 129 GYLLLTSLPLLLCLLYLSLVNGSFNF-----------SDWGSDDSVSLIVyyvlsFMFITKVPLFPFHTWLPIVHAEASS 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 226 AGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPFITLALWGALMTSaicLRQIDLKSLIAYSSVSHMglVVAATMIQT 305
Cdd:MTH00062 198 PVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITA---CSELDGKRWLAFLSLSHI--LVPVLGLFV 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 306 QWAFSGAMILMIS--HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVI 383
Cdd:MTH00062 273 GDWSSINLSFFYClgHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVS 352
|
330
....*....|..
gi 2445584269 384 ALFNWSAFTIIL 395
Cdd:MTH00062 353 SSFGVLVYLLFW 364
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-409 |
6.69e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 64.22 E-value: 6.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 108 LAFSASELMLFYIAFEATLIPTLILITRWGSQlERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLn 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTLGATA-ARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDEL- 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 188 SSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNnlhypFITLALW 267
Cdd:PRK12665 204 PSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGG-----LDTLLMV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 268 GALMTSAI----CLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILL 343
Cdd:PRK12665 279 VALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLR 358
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2445584269 344 LTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIV---IALFNWSAFTIILTGTAillTASYTLY 409
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagAEDGTWLAWALVAGGVV---TSLLTLY 424
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
106-412 |
8.35e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.01 E-value: 8.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 106 ILLAFSASELMLFYIAFEATLIPTLILITRWGSQlERLNAGIYLLFYTLASSLPLLIAILHLHN------QIGSLYLPML 179
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLFSltrqalGTGTLNWTEL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 180 KLSHPTLNSSWSGLAASLALLLaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHY 259
Cdd:PRK08676 194 AAHASLLSPSVLGASFLFIFIG-FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQF 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 260 PFITLALwGALMTSAIC---LRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYER 336
Cdd:PRK08676 273 SNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQ 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2445584269 337 THSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAILLTASYTLYMLM 412
Cdd:PRK08676 352 YRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-412 |
6.95e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 61.12 E-value: 6.95e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 109 AFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLpLLIAILHLHNQIGSLYLPMLKLSHPTLNS 188
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAF-FVVAVAILYSVVGTLNMADISVKIAELSA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 189 SWSGLAASLALLLAFM--VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TILVHPSSNNLHYPFITLA 265
Cdd:PRK07691 203 GQTGLITVVAILFLFVfaTKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILA 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 266 LWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLT 345
Cdd:PRK07691 283 LLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKM 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584269 346 RGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIiltGTAILLTASYTLYMLM 412
Cdd:PRK07691 363 GGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVS---GIIVLLSSLLVLYSVI 426
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
203-387 |
9.76e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 60.55 E-value: 9.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSS--NNLHYPFITLALWGALMTSAICLRQI 280
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQK 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 281 DLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWL 360
Cdd:PRK08377 296 NVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALT 375
|
170 180
....*....|....*....|....*..
gi 2445584269 361 LANLTNMALPPTTNLMAELTIVIALFN 387
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-407 |
1.11e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.50 E-value: 1.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 95 FASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGI-YLLFYTLASSLpLLIAILHLHNQIGS 173
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSM-VLLGIALLYGQYGT 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 174 LYLPMLKlSHPTLNSSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIMRITILVHPS 253
Cdd:PRK08376 202 LNMAYLA-VKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLFSIYGP 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 254 SNNLH---YPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMG---------LVVAATMIQTQW---AFSGAMILMIS 318
Cdd:PRK08376 280 AINLAtvgWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYgeiALAGGIYHIVN 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 319 HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIV--IALFNwSAFTIILT 396
Cdd:PRK08376 360 HALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFN-PILGVIAM 438
|
330
....*....|.
gi 2445584269 397 GTAILLTASYT 407
Cdd:PRK08376 439 IGSVLTLASFV 449
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
112-448 |
1.24e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 60.54 E-value: 1.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 112 ASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLP-MLKLSHPTLNSSW 190
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeILGQADHIKNHGL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 191 SGLAASLALLLAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITILVHpSSNNLHYPFITLALWGA 269
Cdd:PRK12646 209 FIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLG-LSNMYIYIVTFVGLITM 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 270 LMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFS--------------GAMILMISHGLTSSMLFCLANTNYE 335
Cdd:PRK12646 286 LFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHqqdaiasiyvfvlfAALFHLMNHAIFKCALFMGVGIIDH 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 336 RTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWS-------AFTIILTGTAI---LLTAS 405
Cdd:PRK12646 366 EAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslISMIIIVFIGViasIFTFT 445
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2445584269 406 YTLYMLMMTQRGPLpsHITSIQNSSTREHLLMALHMIPMMLLI 448
Cdd:PRK12646 446 YALYMVKEVFWGKY--DSKVFTKKNIHEPWLFSLPSLILMVLV 486
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
262-423 |
3.42e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 59.01 E-value: 3.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 262 ITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQtqwAFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRD 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 342 LLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGTAIL---LTASYTLYMLMMT---- 414
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgk 435
|
....*....
gi 2445584269 415 QRGPLPSHI 423
Cdd:COG1009 436 PRPKTPKHP 444
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
7.25e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.08 E-value: 7.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 110 FSASELMLFYIAFEATLIPTLILITRwGSQLERLNAGIYLLFYTLASSLpLLIAILHLHNQIGSLYLPMLkLSHPTLNSS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKTGTFDFADI-SQGLINDTS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 190 WSGLAASLALLLAFMV-KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMrITILVHPSS------------NN 256
Cdd:PRK08668 192 TGFALIVFLFLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTklfsefgtyrgvPL 270
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2445584269 257 LHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLF 327
Cdd:PRK08668 271 FNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
99-402 |
7.51e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 57.52 E-value: 7.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 99 VILAQLFILLAFSaSELMLFYIAFEATLIPTLILITrWGSQLERLNAGI-YLLFYTLASSLPLLIAILHLHNQIGSLYLP 177
Cdd:PRK06589 123 NLTILIGVLIALS-SDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFV 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 178 MLKLShptlnsSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSN-- 255
Cdd:PRK06589 201 SGGLF------SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYlq 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 256 ---NLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANT 332
Cdd:PRK06589 275 rifAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGS 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2445584269 333 NYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFN----WSAF--TIILTGTAILL 402
Cdd:PRK06589 355 IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEqnqpWLSIivMLVVIASSILS 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-396 |
1.06e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 53.97 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT--------ILVHPSSNNLhypFITLALWGALMTSAIC 276
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkanfVFTTLPFNNV---FMILAALAIVFGSVLA 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 277 LRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANT---NYERTHSRILLltrGLQPLLP 353
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSMP 374
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2445584269 354 LMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILT 396
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV 417
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-398 |
2.92e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 52.64 E-value: 2.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 95 FASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGI-YLLFYTLASSLpLLIAILHLHNQIGS 173
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFTGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 174 LYL-PMLKLSHPTLNSSWSGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHP 252
Cdd:TIGR01770 183 LNFeDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 253 S-SNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTS----SMLF 327
Cdd:TIGR01770 263 GfSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLS 342
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2445584269 328 CLANTNYERTHSriLLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFN----WSAFTIILTGT 398
Cdd:TIGR01770 343 LLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKsglyWLAVIAVLTSV 415
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
203-371 |
3.73e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.58 E-value: 3.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITI-LVHPSSNNLHYPFITLALWGALMTSAICLRQID 281
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHD 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 282 LKSLIAYSSVSHMGLVVAA---TMI--------QTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQP 350
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIR 379
|
170 180
....*....|....*....|.
gi 2445584269 351 LLPLMATWWLLANLTNMALPP 371
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPP 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-412 |
3.34e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.18 E-value: 3.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 109 AFSASELMLFYIAFEATLIPTLILITrWGSQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLKLSHPTLNS 188
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 189 SWSGLAASLALLLAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPFITLALWG 268
Cdd:PRK12663 203 TATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 269 ALMTSAI-CLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRG 347
Cdd:PRK12663 282 TMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGG 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2445584269 348 LQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILtgtAILLTASYTLYMLM 412
Cdd:PRK12663 362 LYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLA---LMLITSLITMYSLF 423
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-380 |
4.78e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 49.19 E-value: 4.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 59 DQISSPLLVLSCWLLPLMIMASQNHLEQEPiNRKRAFASTVILAQLFILLAFSASELMLFyIAFEATLIPTLILITRWGS 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDP-HVPRFLCYLSLFTFLMMVLVTSDNYLQLF-IGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 139 QLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLK---LSHPTLNSSWSGLAASLALLLAFMV---------- 205
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 206 -KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMritILVHPSSNNLHYPFITLALWGAL---MTSAICLRQID 281
Cdd:MTH00032 237 gKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLM---IRSFPLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 282 LKSLIAYSSVSHMGLVVaaTMIQTQWAFSGAMILMISHGLTSSMLFCLA-----NTNYERTHSRILlltRGLQPLLPLMA 356
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTY 387
|
330 340
....*....|....*....|....*....
gi 2445584269 357 TWWLLANLTNMALPPTT-----NLMAELT 380
Cdd:MTH00032 388 TMMLIGSFSIMGLPYLTgfyskDLILELT 416
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-449 |
5.09e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.92 E-value: 5.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 95 FASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSL 174
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 175 YLPMLKLSHPTLNSSwSGLAASLALLLAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITILVHPS 253
Cdd:MTH00020 193 DFSSVFNMVVSAPSS-DITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIRSSPLFEQA 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 254 SNNLHYPFITLALwGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTqwaFSGAMILMISHGLTSSMLFCLANT- 332
Cdd:MTH00020 271 PLALIIVTIVGSL-TVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSv 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 333 ----NYERTHSRIllltRGLQPLLPLMATWWLLANLTNMALPPTTNLMA-ELTIVIALF-NWSAFTIILTGTAILLTASY 406
Cdd:MTH00020 347 ihalSDEQDMRKM----GGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSkDLILELAFGqYYLIFAYWLGCFSALLTAFY 422
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2445584269 407 TLYMLmmtqrgplpsHITSIQNSSTREHLLMALH------MIPMMLLIL 449
Cdd:MTH00020 423 SIRLI----------YLTFLSNTNLKKAVFFHLHegdwnlLLPLGILAL 461
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-323 |
1.55e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 47.03 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 4 IIAPTAMLLPLAIL---SPRKHLWTNITLYSLLIATMSLQWLTPtYYPNKGLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:COG1007 12 ILLLGALVLLLLDLflpRRSRRLLAGLALLGLLLALALLLLALG-GGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 81 QNHLEQEPINRkRAFASTVILAQLFILLAFSASELMLFYIAFEATLIPTLILITRWGSQLERLNAGI-YLLFYTLASSLp 159
Cdd:COG1007 91 RDYLERRGLLR-GEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF- 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 160 LLIAILHLHNQIGSLYLP--MLKLSHPTLNSswsglaASLALLLAFMV-----KAPLYGLHLWLPKAHVEAPIAGSMLLA 232
Cdd:COG1007 169 LLYGISLLYGATGSLNLAgiAAALAAGGANS------PLLLLGLVLVLaglafKLSAVPFHMWTPDVYEGAPTPVTAFLA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 233 ALLLKLGGYGIMRITILVHPS-SNNLHYPFITLA----LWGALMTsaicLRQIDLKSLIAYSSVSHMGLVVAATMIQTQW 307
Cdd:COG1007 243 TAPKIAAFAALLRLLVEAFPGlAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPL 318
|
330
....*....|....*.
gi 2445584269 308 AFSGAMILMISHGLTS 323
Cdd:COG1007 319 GVSAALFYLLAYLFMN 334
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
212-402 |
9.92e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 44.58 E-value: 9.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSV 291
Cdd:PRK06525 226 FYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTI 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 292 SHMGLVVAATMIQ---TQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMA 368
Cdd:PRK06525 306 TQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITG 385
|
170 180 190
....*....|....*....|....*....|....
gi 2445584269 369 LPPTTNLMAELTIVIALFNWSAFTIILTGTAILL 402
Cdd:PRK06525 386 VPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
256-371 |
1.81e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.87 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 256 NLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYE 335
Cdd:PRK06277 264 SAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSY 343
|
90 100 110
....*....|....*....|....*....|....*.
gi 2445584269 336 RTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK06277 344 RTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
277-323 |
1.16e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 41.34 E-value: 1.16e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2445584269 277 LRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
107-411 |
1.30e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 41.45 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 107 LLAFS--------ASELMLFYIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPM 178
Cdd:PRK12644 112 LVAFAgamfglvtSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSE 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 179 LklshptLNSSWSGLAASLALLLAF---MVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRITi 248
Cdd:PRK12644 192 L------LADPPTGPAVSVAVVLILvgaLSKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVARLA- 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 249 lvhPSSNNL---HYPFITLALWGALMTSAICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSM 325
Cdd:PRK12644 258 ---PGFADVpvwRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAA 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 326 LFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVIALFNWSAF----TIILTGTAI- 400
Cdd:PRK12644 335 LFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIVLg 414
|
330
....*....|..
gi 2445584269 401 -LLTASYTLYML 411
Cdd:PRK12644 415 sILTVAYSLRFL 426
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-330 |
1.51e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 40.99 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 203 FMVKAPLYGLHLWLPKAHVEA--PIAGSMllaALLLKLGGYGIMRITILVHPSSNNLHYPFITLALW-GALMTSAI---- 275
Cdd:PRK12666 220 FLIKAAMWPLNFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLpGGLATLAFgaig 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2445584269 276 CLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12666 297 VLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-371 |
7.08e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.04 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 106 ILLAFSASELMLFyIAFEATLIPTLILITRWGSQLERLNAGIYLLFYTLASSLPLLIAILHLHNQIGSLYLPMLkLSHPT 185
Cdd:PRK12649 125 IGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATI-LQDSE 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 186 LNSSWSGLAASLALLLAFMVKA-------PLYglhLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRItilvHPSSNNL 257
Cdd:PRK12649 203 LIENIKGHPLFLITLILIFIGAaaksaqgPFY---IWLPNA-MEAPTPVSAFLHSATMVKAGvYLVARI----HPIFSGT 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 258 HYPFITLALWG---ALMTSAICLRQIDLKSLIAYSSVSHMGLVVA----ATMIQTQWAFSGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12649 275 EAWFILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTmygyTTYHEPGLGVAAATFHLLNHATFKACLFLVA 354
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2445584269 331 NTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK12649 355 GIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
212-390 |
8.49e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.65 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVHPSSNNLHYPFITLALWGALMTSAICLRQIDLKSLIAYSSV 291
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584269 292 SHMGLVV-----AATMIQTQ------WAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWL 360
Cdd:PRK08042 279 ENIGIILlglgaGVTGIALEqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAML 358
|
170 180 190
....*....|....*....|....*....|
gi 2445584269 361 LANLTNMALPPTTNLMAELTIVIALFNWSA 390
Cdd:PRK08042 359 VGLMAMAALPPLNGFAGEWVIYQSFFKLSN 388
|
|
| |
