|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 738.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 1 MLKIIIPTIMLLPLTFLSPNKHLWTNTTMHSFLIAAASLQWLVPTYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 81 QNHLEQEPAIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 161 LIAILHLQNQIGTLYLPMLKLSHPTMSTSWTGLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 241 YGIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAI 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584303 401 LLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELISGT 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 600.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 1 MLKIIIPTIMLLPLTFLSPNKHLWTNTTMHSFLIAAASLQWLVPTYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 81 QNHLEQEPAIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 161 LIAILHLQNQIGTLYLPMLKLSHPTMSTSWTGLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 241 YGIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAI 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2445584303 401 LLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELISG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 594.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 1 MLKIIIPTIMLLPLTFLSPNKHLWTNTTMHSFLIAAASLQWLVPTYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 81 QNHLEQEPAIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 161 LIAILHLQNQIGTLYLPMLKLSHPTMSTSWTGLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 241 YGIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAI 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584303 401 LLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELISGT 457
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGP 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
1.92e-176 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 502.18 E-value: 1.92e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 1 MLKIIIPTIMLLPLTFLSPNKHLWTNTTMHSFLIAAASLQWLV-PTYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 80 SQNHLEQEPAIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 160 LLIAILHLQNQIGTLYLPMLKLSHPTMSTSWTGLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 240 GYGIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 320 GLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584303 400 ILLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELISG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
1.98e-163 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 468.65 E-value: 1.98e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 3 KIIIPTIMLLPLTFLSPNKHLWTNTTMHSFLIAAASLQWL-VPTYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFkWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 82 NHLEQEPAIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 162 IAILHLQNQIGTLYLPMLKLSHPTMSTSWTGLVcstALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLTTWNNNLWWL---ACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 242 GIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 322 TSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAIL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2445584303 402 LTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
4.80e-144 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 419.77 E-value: 4.80e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 1 MLKIIIPTIMLLPLTFLSPNKHLWTNTTMHSFLIAAASLqWLVPTYYPSK--GLTPWTSIDQISSPLLVLSCWLLPLMIM 78
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSL-FLLNNHWSSSwhNLSLSLATDSLSSPLIILSCWLAPLSLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 79 ASQNHLEQEPAIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSL 158
Cdd:MTH00044 80 ASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 159 PLLIAILHLQNQIGTLYLPMLKLSHPTMSTSWTGLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKL 238
Cdd:MTH00044 160 PLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 239 GGYGIMRVTILVNPPS-NNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMI 317
Cdd:MTH00044 240 GGYGLIRLINLFSLPSaNNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMI 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 318 SHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTG 397
Cdd:MTH00044 320 AHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2445584303 398 TAILLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELIS 455
Cdd:MTH00044 400 LATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
4.83e-122 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 362.93 E-value: 4.83e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 1 MLKIIIPTIMLLPLTFLSPNkhlWTNTTMHSFLIAAASLQWLVPTYYPSKgLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFLFMLLFSLSFYFSN-ISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 81 QNHLEQEPAIRKRIFLTTMILAqpFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 161 LIAILHLQNQIGTLYLPMLKLShptmstSWTGLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 241 YGIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAI 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2445584303 401 LLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
55-456 |
1.59e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 337.58 E-value: 1.59e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 55 WTSIDQISSPLLVLSCWLLPLMIMASQNhlEQEPAIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILIT 134
Cdd:MTH00150 19 LFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLIL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 135 RWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTSWtglVCSTALILAFMVKAPLYGLHL 214
Cdd:MTH00150 97 GWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKLPMYPFHL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHM 294
Cdd:MTH00150 174 WLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHM 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 295 GLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTN 374
Cdd:MTH00150 254 SLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 375 LMAELTIVIALFNWSSLTLILTGTAILLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELI 454
Cdd:MTH00150 334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
..
gi 2445584303 455 SG 456
Cdd:MTH00150 414 FM 415
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.39e-109 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 331.32 E-value: 1.39e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 1 MLKIIIPTIMLLPLTFLSpNKHLWTNTTMHSFLIAAASLQWLVPTYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIK-YPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 81 QNHLEQEPAirKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00014 80 FKIFQNNKA--PKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 161 LIAILHLQNQIGTLYLPMLKLSHPTMSTSwtgLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 241 YGIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAI 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2445584303 401 LLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELIS 455
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
1.96e-105 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 320.39 E-value: 1.96e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 57 SIDQISSPLLVLSCWLLPLMIMASQNHLEQEpaIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:MTH00205 54 SFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGW 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 137 GSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLylPMLKLSHPTMSTSWTGLVCStALILAFMVKAPLYGLHLWL 216
Cdd:MTH00205 132 GYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSL--SMFFNFPLNFSDFYLFLYWI-FLMLAFLVKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGL 296
Cdd:MTH00205 209 PKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 297 VVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLM 376
Cdd:MTH00205 289 MVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLA 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2445584303 377 AELTIVIALFNWSSLTLILTGTAILLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELI 454
Cdd:MTH00205 369 SEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
1.99e-74 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 235.29 E-value: 1.99e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 112 ASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTSWT 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 192 GLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPFITLALWGALM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 272 TSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLA-NTNYERTHSRILLLTRGLQP 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2445584303 351 LLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGT 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
58-454 |
3.21e-72 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 235.75 E-value: 3.21e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 58 IDQISSPLLVLSCWLLPLMIMASQNHLEQepaiRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:COG1008 80 VDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 138 SqPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTSWTGLVCsTALILAFMVKAPLYGLHLWLP 217
Cdd:COG1008 156 G-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLF-LAFFIAFAVKVPMFPFHTWLP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNP-PSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGL 296
Cdd:COG1008 234 DAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 297 VVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLM 376
Cdd:COG1008 314 VLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFV 393
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2445584303 377 AELTIVIALFNWSSLTLILTGTAILLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLLILKPELI 454
Cdd:COG1008 394 GEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPL 471
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
58-449 |
2.04e-61 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 207.75 E-value: 2.04e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 58 IDQISSPLLVLSCWLLPLMIMASQNhleqepAIRKRI--FLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITR 135
Cdd:PRK05846 80 VDGISLLLVVLTALLTPLAVLASWE------EIKKRVkfYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 136 WGSqPERLNAGIYLLFYTLASSLPLLIAILHL----QNQIGTLYLPMLKlsHPTMSTSWTGLVCsTALILAFMVKAPLYG 211
Cdd:PRK05846 154 WGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLL--NLPLPPGVQYWLF-LAFFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNP-PSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSS 290
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 291 VSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALP 370
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2445584303 371 PTTNLMAELTIVIALFNWSSLTLILTGTAILLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMAlhmiPMTLLIL 449
Cdd:PRK05846 390 GTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILL----PLVALLL 464
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-411 |
2.30e-60 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 204.40 E-value: 2.30e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 57 SIDQISSPLLVLSCWLLPLMIMASQnhleqePAIRKRI--FLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILIT 134
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASW------ESIQKRVkeFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 135 RWGSqPERLNAGIYLLFYTLASSLPLLIAILHLQNQIG--TLYLPMLKLSHPTMSTSWTGLvcstALILAFMVKAPLYGL 212
Cdd:TIGR01972 148 VWGG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgtFDLLELLNLPLPFGVQTWLFL----AFFIAFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPFI-TLALWGALMTSAICLRQIDLKALIAYSSV 291
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLaALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 292 SHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPP 371
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2445584303 372 TTNLMAELTIVIALFNWSSLTLILTGTAILLTASYTLYML 411
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
4.06e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 201.45 E-value: 4.06e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 57 SIDQISSPLLVLSCWLLPLMIMASQN---HLEQEpairkriFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILI 133
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLI 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 134 TRWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTL-YLPMLKLSHPTMSTSWTGLvcstALILAFMVKAPLYGL 212
Cdd:MTH00204 153 GIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKWLLV----GFFLSLAVKIPQIPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPFITL-----ALWGALMTSaiclRQIDLKALIA 287
Cdd:MTH00204 229 HIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMlsviaVIYGSLTTC----RQVDFKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 288 YSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNM 367
Cdd:MTH00204 305 YSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANM 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 368 ALPPTTNLMAELTIVIALFNWSSLTLILTGTAILLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMALHMIPMTLL 447
Cdd:MTH00204 385 GFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLL 464
|
....*..
gi 2445584303 448 ILKPELI 454
Cdd:MTH00204 465 GIVPFII 471
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-438 |
1.05e-55 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 192.83 E-value: 1.05e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 57 SIDQISSPLLVLSCWLLPLMIMASQNHLEqepaIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 137 GSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTL-YLPMLKLSH--PTMSTSWTGLvcstALILAFMVKAPLYGLH 213
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCSHvvSEQTQKWIFL----GIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNP-PSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVS 292
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 293 HMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPT 372
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2445584303 373 TNLMAELTIVIALFNWSSLTLILTGTAILLTASYTLYMLMITQRGTLPSHITSIQNSSTREHLLMA 438
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITA 476
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
58-410 |
7.37e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 187.18 E-value: 7.37e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 58 IDQISSPLLVLSCWLLPLMIMASQNhleqepAIRKRI--FLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITR 135
Cdd:MTH00217 78 VDGISIFFLILTALLTPICILISWN------SIKFLIkeFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 136 WGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTL---YLPMLKLSHPTMSTSWTGLVCSTAlilafmVKAPLYGL 212
Cdd:MTH00217 152 WGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTdyqALCCLKIEKELQYFIFLGFFLSLA------IKIPKIPF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPFI-TLALWGALMTSAICLRQIDLKALIAYSSV 291
Cdd:MTH00217 226 HIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 292 SHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPP 371
Cdd:MTH00217 306 AHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPL 385
|
330 340 350
....*....|....*....|....*....|....*....
gi 2445584303 372 TTNLMAELTIVIALFNWSSLTLILTGTAILLTASYTLYM 410
Cdd:MTH00217 386 SCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
94-412 |
9.99e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 163.54 E-value: 9.99e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 94 IFLTTMILAqpFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILHlqnqigt 173
Cdd:MTH00094 65 LILSNLLIL--ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK------- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 174 lYLPMLKLSHPTMSTSWTglvCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPP 253
Cdd:MTH00094 136 -NFFFFSLCYFDFFLSWE---MFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 254 SNNLhypFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTN 333
Cdd:MTH00094 212 YNNF---WIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEF 288
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2445584303 334 YERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAILLTASYTLYMLM 412
Cdd:MTH00094 289 YHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
30-411 |
1.28e-44 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 162.89 E-value: 1.28e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 30 HSFLIAAASLQwLVPTY--YPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMASQNhLEQEPairkRIFLTTMILAQPFIL 107
Cdd:PRK12561 28 QHYDPSSSSLQ-LVERYawLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQI 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 108 LAFSASELMLFYIAFEATLIPTLILITRWGSQpERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMS 187
Cdd:PRK12561 102 GVFLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYP 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 188 TSWtGLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYP-FITLA- 265
Cdd:PRK12561 181 LAL-ELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGv 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 266 ---LWGALMTSAiclrQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRIL 342
Cdd:PRK12561 260 vniIYGALNAFA----QDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSI 335
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2445584303 343 LLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFN-------WSSLTLILTGTAILLTASYTLYML 411
Cdd:PRK12561 336 PNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSsdvysstFRTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-415 |
1.32e-38 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 144.90 E-value: 1.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 58 IDQISSPLLVLSCWLLPLMIMASQNHLEQEPaiRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 138 SQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTSWTGLVcSTALILAFMVKAPLYGLHLWLP 217
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAA-FALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPP--SNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMG 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGAdpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 296 LVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNL 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2445584303 376 MAELTIVIALFN----WSSLTLILTGtaiLLTASYTLYMLMITQ 415
Cdd:COG0651 390 VSKWLLLQAALEagawLLAAVLLLSS---LLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-455 |
8.29e-36 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 138.69 E-value: 8.29e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 45 TYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMASQnhleqEPAIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEA 124
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW-----PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWEL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 125 TLIPTLILITRWGSQpERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTSWTgLVCSTALILAFM 204
Cdd:PRK02546 147 ELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAYG 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYP-FITLALWGALMTSAICLRQIDLK 283
Cdd:PRK02546 225 VKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLK 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 284 ALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLAN 363
Cdd:PRK02546 305 RKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACS 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 364 LTNMALPPTTNLMAELTIVIALFNWSSLTL-------ILTGTAILLTASYTLYMLMITQRGTLPSHITSIQN---SSTRE 433
Cdd:PRK02546 385 LASLALPGMSGFVAELMVFVGFATSDAYTLpfrvvvvFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEKlvdAEPRE 464
|
410 420
....*....|....*....|..
gi 2445584303 434 HLLMALHMIPMTLLILKPELIS 455
Cdd:PRK02546 465 VFIIACLLVPIIGIGLYPKLVT 486
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-426 |
2.93e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 125.58 E-value: 2.93e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 48 PSKGLTPWTSIDQISSPLLVLSCWLLPLMIMASQNHLEqepaiRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLI 127
Cdd:PRK06473 67 DSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 128 PTLILITRWGSQpERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTSwTGLVCSTALILAFMVKA 207
Cdd:PRK06473 142 PLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 208 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPFI-TLALWGALMTSAICLRQIDLKALI 286
Cdd:PRK06473 220 PLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMV 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 287 AYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL---QPLLPLMAIWWLLAN 363
Cdd:PRK06473 300 AYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGV 379
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2445584303 364 LTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAILLTASYTLYMLMITQRGTLPSHITSI 426
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
51-422 |
3.84e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 125.21 E-value: 3.84e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 51 GLTPWTSIDQISSPLLVLSCWLLPLMIMASQNHLEqepaiRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTL 130
Cdd:PRK07363 70 GLSYSLGVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFY 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 131 ILITRWGSQpERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTSwTGLVCSTALILAFMVKAPLY 210
Cdd:PRK07363 145 LLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 211 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPfiTLALWG---ALMTSAICLRQIDLKALIA 287
Cdd:PRK07363 223 PLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGtisVIYGALSAIAQKDIKRMVA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 288 YSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL-QPL--LPLMAIWWLLANL 364
Cdd:PRK07363 301 YSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGM 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2445584303 365 TNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAILLTASYTLYMLMITQRGTLPSH 422
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-411 |
9.01e-27 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 112.73 E-value: 9.01e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 110 FSASELMLFYIAFEATLIPTLILITRWGSQpERLNAGIYLLFYTLASSLPLLIAILHLqnqigTLY---LPMLKLSHPTM 186
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGM-----GLYgsnEPTLNFETLAN 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 187 STSWTGL--VCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPFitL 264
Cdd:CHL00011 203 QSYPVALeiLFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPW--L 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 265 ALWGALM---TSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:CHL00011 281 VIVGAIQiiyAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVY 360
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584303 342 LLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIA-------LFNWSSLTLILTGTAILLTASYTLYML 411
Cdd:CHL00011 361 LDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGiitsqkyLLMPKILITFVMAIGMILTPIYLLSML 437
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
2.13e-24 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 97.21 E-value: 2.13e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 1 MLKIIIPTIMLLPLTFLSPNKHLWTNTTMHSFLIAAASLQWL-VPTYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLnNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2445584303 80 SQNHLEQEPAIRKRIFLTTMILAQPFILLA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-449 |
5.32e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 101.59 E-value: 5.32e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 58 IDQISSPLLVLSCWLLPLMIMASQNHLEQEPAIRkrIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 138 SQPERLNAGI-YLLFYTLASSLpLLIAILHLQNQIGTLYLPMLKLSHPTMSTSWTG-----LVCSTALILA-----FMVK 206
Cdd:PRK12667 158 DRGDAVEAAIkYALIGAVGTTL-YFLALAFLYATFGTLNMADLSAKIRGLSFPLTGglagnPPLALGVALAlalwaFTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 207 APLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRV-------TILVNPPSNNLHYPFITLALWGALMTSAICLRQ 279
Cdd:PRK12667 237 AAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 280 IDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWW 359
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 360 LLANLTNMALPPTTNLMAELTIVIALFNWSSLTL---ILTGTAILLTASYTLYMLMITQRGtlpshiTSIQNSSTREHLL 436
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPalvLLIASAISLVGYFRAWYSLFFGKP------KSGEEVEHKESPS 470
|
410
....*....|...
gi 2445584303 437 MALHMIPMTLLIL 449
Cdd:PRK12667 471 MSVVILVLALAVL 483
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-416 |
1.18e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 97.26 E-value: 1.18e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 109 AFSASELMLFYIAFEATLIPTLILITRWGSqPERLNAG-IYLLFYTLASSLpLLIAILHLQNQIGTLYLPMLKLSHPTMS 187
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAArKYLIVGLIGSTF-LLIGVGLLYGVTGTLNMADLAGALAENP 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 188 TSWTGLVcstALILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSN----NLHYPFIT 263
Cdd:PRK08375 200 TVVTAFG---FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFrfalGLGWLLAV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 264 LALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILL 343
Cdd:PRK08375 277 LALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLS 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2445584303 344 LTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALF---NWSSLTLILTGTaiLLTAsytLYMLMITQR 416
Cdd:PRK08375 357 ELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVeagQWLVLAVLLASS--LLAL---LYFLRIWYR 427
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-406 |
1.83e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 75.37 E-value: 1.83e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 91 RKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITrWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQ 170
Cdd:PRK07234 92 KTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 171 IGTLYLPMLKLSHPTmstswtglvcSTALI-LAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTIL 249
Cdd:PRK07234 171 NGTFAFSGLATADPE----------AFALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 250 VNPPSNNLHYpfitLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIqtqwafsgAMILMISHGLTSSMLFCL 329
Cdd:PRK07234 241 VPGLDLIVRI----FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584303 330 ANTNYERTHSRILLLTRGLQPLLPLmaiwwLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGtaiLLTASY 406
Cdd:PRK07234 309 AGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAA---VGTAAS 377
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-409 |
2.87e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 74.62 E-value: 2.87e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 59 DQISSPLLVLSCW-LLPLMIMA-SQNHLEQEPAIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:PRK12665 75 DRLSALMLVVSSVvLLAVLVYAiGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTLG 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 137 GSqPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTSWTGLVCSTALIlAFMVKAPLYGLHLWL 216
Cdd:PRK12665 155 AT-AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPSGTRTALFAVLLV-AFGIKAAVFPLSFWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPpsnnlHYPFITLALWGALMTSAI----CLRQIDLKALIAYSSVS 292
Cdd:PRK12665 233 PDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-----GGGLDTLLMVVALLTMVVgilgAIAQSDIKRLLSFTLVS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 293 HMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPT 372
Cdd:PRK12665 308 HIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPF 387
|
330 340 350
....*....|....*....|....*....|....*...
gi 2445584303 373 TNLMAELTIVIA-LFNWSSLTLILTGTAIlLTASYTLY 409
Cdd:PRK12665 388 SGFIGKVALLEAgAEDGTWLAWALVAGGV-VTSLLTLY 424
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
43-392 |
2.91e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 75.15 E-value: 2.91e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 43 VPTYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMASQNHLEQEPAIRKRIFLTTMILAQPFILLAFSASELMLFYIAF 122
Cdd:PRK08667 60 IPLWGIAPGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 123 -EATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTSWTglvcstALIL 201
Cdd:PRK08667 140 wEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFL------LLFL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 202 AFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQID 281
Cdd:PRK08667 214 GFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHD 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 282 LKALIAYSSVSHMGLV-----------VAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQP 350
Cdd:PRK08667 294 LKGLLAYSSIENIGIIlmgiglyvifgVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVK 373
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2445584303 351 LLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLT 392
Cdd:PRK08667 374 LMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVA 415
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
95-372 |
3.14e-14 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 75.08 E-value: 3.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 95 FLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPErlNAGIYLLFYTLASSLPLLIAILHLQNQIGTL 174
Cdd:PRK12650 112 FYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 175 ylpmlKLSHPTMSTSW---TGLVCSTALILAFMV--KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTIL 249
Cdd:PRK12650 190 -----SLSGILHSDVWaekPGLTTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPV 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 250 VnppSNNL--HYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLF 327
Cdd:PRK12650 265 F---HDVAvwNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLF 341
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 2445584303 328 CLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPT 372
Cdd:PRK12650 342 MLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-387 |
7.64e-14 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 73.43 E-value: 7.64e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 199 LILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILV--NPPSNNLHYPFITLALWGALMTSAIC 276
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 277 LRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMA 356
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG 379
|
170 180 190
....*....|....*....|....*....|.
gi 2445584303 357 IWWLLANLTNMALPPTTNLMAELTIVIALFN 387
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGLA 410
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
72-395 |
4.52e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 70.72 E-value: 4.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 72 LLPLMI-MASQNHLEQEPAIRKRIFLttmILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLL 150
Cdd:MTH00062 52 LLVLFLgLYSQVMFYNLLSGVSRFFL---FLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 151 FYTLASSLPLLIAILHLQNQIGTLYLPMLKlshptmSTSWTGLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAGSML 230
Cdd:MTH00062 129 GYLLLTSLPLLLCLLYLSLVNGSFNFSDWG------SDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 231 LAALLLKLGGYGIMRVTILVNPPSNNLHYPFITLALWGALMTSaicLRQIDLKALIAYSSVSHMglVVAATMIQTQWAFS 310
Cdd:MTH00062 203 LSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITA---CSELDGKRWLAFLSLSHI--LVPVLGLFVGDWSS 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 311 GAMILMIS--HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNW 388
Cdd:MTH00062 278 INLSFFYClgHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGV 357
|
....*..
gi 2445584303 389 SSLTLIL 395
Cdd:MTH00062 358 LVYLLFW 364
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-407 |
1.74e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 69.36 E-value: 1.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 118 FYIAFEATLIPTLILITRWGSQPERLNAGI-YLLFYTLASSLpLLIAILHLQNQIGTLYLPMLKlSHPTMSTSWTGLVCS 196
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSM-VLLGIALLYGQYGTLNMAYLA-VKMSENPTVVAKIAL 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 197 TALILAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLH---YPFITLALWGALMTS 273
Cdd:PRK08376 224 ALFIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLFSIYGPAINLAtvgWVIIILGCLTMFVGV 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 274 AICLRQIDLKALIAYSSVSHMG---------LVVAATMIQTQW---AFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:PRK08376 303 AMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYgeiALAGGIYHIVNHALYKALLFLTAGAVIYETGTRN 382
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2445584303 342 LLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIV--IALFNwSSLTLILTGTAILLTASYT 407
Cdd:PRK08376 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFN-PILGVIAMIGSVLTLASFV 449
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
112-401 |
2.84e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 68.79 E-value: 2.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 112 ASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGT-----------------L 174
Cdd:PRK12647 114 SDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTyslsellasgdvirehpL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 175 YLPMLKLshptmstswtglvcstALILAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRVtilvNPP 253
Cdd:PRK12647 194 YLAILLL----------------VLGGAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLARL----NPV 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 254 SNNLHYPFITLALWGA---LMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12647 252 LGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVA 331
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2445584303 331 NTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAIL 401
Cdd:PRK12647 332 GIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
148-387 |
3.11e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 65.17 E-value: 3.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 148 YLLFYTLASSLpLLIAILHLQNQIGTLYLPMLKLSHPTMSTSwTGLVCSTALILAFMVKAPLYGLHLWLPKAHVEAPIAG 227
Cdd:PRK08377 163 YIVLGGIGSSF-FLIGVALIYGATGTLNMAHIAQLAGTIDPT-VAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPI 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 228 SMLLAALLLKLGGYGIMRVTILVNPPS--NNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQT 305
Cdd:PRK08377 241 TVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGT 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 306 QWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIAL 385
Cdd:PRK08377 321 QAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAG 400
|
..
gi 2445584303 386 FN 387
Cdd:PRK08377 401 LS 402
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-412 |
7.21e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 64.20 E-value: 7.21e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 109 AFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLpLLIAILHLQNQIGTLYLPMLKLSHPTMST 188
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAF-FVVAVAILYSVVGTLNMADISVKIAELSA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 189 SWTGLVCSTALIL--AFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRV-TILVNPPSNNLHYPFITLA 265
Cdd:PRK07691 203 GQTGLITVVAILFlfVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILA 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 266 LWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLT 345
Cdd:PRK07691 283 LLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKM 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584303 346 RGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLiltGTAILLTASYTLYMLM 412
Cdd:PRK07691 363 GGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVS---GIIVLLSSLLVLYSVI 426
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-412 |
8.35e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.01 E-value: 8.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 93 RIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQpERLNAGIYLLFYTLASSLPLLIAILHL----- 167
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLfsltr 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 168 -QNQIGTLYLPMLKLSHPTMSTSWTGLVCSTALIlAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRV 246
Cdd:PRK08676 181 qALGTGTLNWTELAAHASLLSPSVLGASFLFIFI-GFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 247 TILVNPPSNNLHYPFITLALwGALMTSAIC---LRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTS 323
Cdd:PRK08676 260 SALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVK 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 324 SMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAILLT 403
Cdd:PRK08676 339 SGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLA 418
|
....*....
gi 2445584303 404 ASYTLYMLM 412
Cdd:PRK08676 419 ASSFAIFLL 427
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
107-423 |
1.02e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 63.63 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 107 LLAFSASELML--------FYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPM 178
Cdd:COG1009 117 LLLFMAAMLGLvlsdnlllLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSE 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 179 LKLSHPTMSTSWTGLVCSTALILAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRVTILVN 251
Cdd:COG1009 197 LLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTpvsallhAATMVKA------GVYLLARLSPLFA 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 252 PpSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQtqwAFSGAMILMISHGLTSSMLFCLAN 331
Cdd:COG1009 270 L-SPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAG 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 332 TNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAIL---LTASYTL 408
Cdd:COG1009 346 SVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSF 425
|
330
....*....|....*....
gi 2445584303 409 YMLMIT----QRGTLPSHI 423
Cdd:COG1009 426 RLFFLVffgkPRPKTPKHP 444
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
5.79e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.55 E-value: 5.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 110 FSASELMLFYIAFEATLIPTLILITRwGSQPERLNAGIYLLFYTLASSLpLLIAILHLQNQIGTLYLPMLkLSHPTMSTS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKTGTFDFADI-SQGLINDTS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 190 WTGLVCSTALILAFMV-KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG-IMRVTILvnpPSNNLHYPFIT---- 263
Cdd:PRK08668 192 TGFALIVFLFLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfLLVLYVL---PGTKLFSEFGTyrgv 268
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2445584303 264 ------LALWGAL---MTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLF 327
Cdd:PRK08668 269 plfnyiLAWLGNIsiiVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-447 |
7.50e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 60.99 E-value: 7.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 106 ILLAFSaSELMLFYIAFEATLIPTLILITrWGSQPERLNAGI-YLLFYTLASSLPLLIAILHLQNQIGTLYLpmlklshp 184
Cdd:PRK06589 130 VLIALS-SDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDF-------- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 185 tmsTSWTGLVCSTALILAFM-----VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSN---- 255
Cdd:PRK06589 200 ---VSGGLFSKNQSIILLLMfiygiAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYlqri 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 256 -NLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNY 334
Cdd:PRK06589 277 fAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIY 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 335 ERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSS------LTLILTGTAILLtasyTL 408
Cdd:PRK06589 357 SLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQpwlsiiVMLVVIASSILS----AL 432
|
330 340 350
....*....|....*....|....*....|....*....
gi 2445584303 409 YMLMITQRGTLPShitSIQNSSTREHLLMALHMIPMTLL 447
Cdd:PRK06589 433 YLLKILSSIYKPS---LSENSFITKSLPYLMQISVITCC 468
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
104-412 |
8.01e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 60.73 E-value: 8.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 104 PFILL-------AFSASELMLFYIAFEATLIPTLILITrWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYL 176
Cdd:PRK12663 112 PFILLlmagvigSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 177 PMLKLSHPTMSTSWTGLVCSTALILAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNN 256
Cdd:PRK12663 191 AHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 257 LHYPFITLALWGALMTSAI-CLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYE 335
Cdd:PRK12663 270 LLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVR 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2445584303 336 RTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILtgtAILLTASYTLYMLM 412
Cdd:PRK12663 350 LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLA---LMLITSLITMYSLF 423
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-371 |
1.70e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 59.90 E-value: 1.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 94 IFLTTMILaqpfILLAFSAselMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGT 173
Cdd:PRK06521 121 LFLASMVL----VLLADDA---FSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 174 LYLPMLKLSHPTmstswtGLVCSTALILAFM---VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTI-L 249
Cdd:PRK06521 194 YDFAAMRAAHLS------PFWASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 250 VNPPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAA---TMI--------QTQWAFSGAMILMIS 318
Cdd:PRK06521 268 LGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLN 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2445584303 319 HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPP 371
Cdd:PRK06521 348 HALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
112-411 |
1.83e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 60.15 E-value: 1.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 112 ASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLP-MLKLSHPTMSTSW 190
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeILGQADHIKNHGL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 191 TGLVCSTALILAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRVTILVNPpSNNLHYPFITLALWGA 269
Cdd:PRK12646 209 FIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLGL-SNMYIYIVTFVGLITM 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 270 LMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFS--------------GAMILMISHGLTSSMLFCLANTNYE 335
Cdd:PRK12646 286 LFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHqqdaiasiyvfvlfAALFHLMNHAIFKCALFMGVGIIDH 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 336 RTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSL-------TLILTGTAI---LLTAS 405
Cdd:PRK12646 366 EAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLsqfslisMIIIVFIGViasIFTFT 445
|
....*.
gi 2445584303 406 YTLYML 411
Cdd:PRK12646 446 YALYMV 451
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-454 |
6.30e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 58.04 E-value: 6.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 95 FLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGI-YLLFYTLASSLpLLIAILHLQNQIGT 173
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFTGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 174 LYLPMLKLSHPTMSTSWTGLVCSTALIL-AFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILV-N 251
Cdd:TIGR01770 183 LNFEDLLLFLSNGMLNISLLLLGIVLILvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 252 PPSNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTS----SMLF 327
Cdd:TIGR01770 263 GFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLS 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 328 CLANTNYERTHSriLLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLIltGTAILLTASYT 407
Cdd:TIGR01770 343 LLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLA--VIAVLTSVIGA 418
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2445584303 408 LYMLMITQRGTLPSHITSIQNSSTR--EHLLMALHMIPMTLLILKPELI 454
Cdd:TIGR01770 419 FYYLRVVKVMYFDKPERRIPSNPQSkaQSLLLSISALFILFLGLFPSLI 467
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
7.14e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 57.94 E-value: 7.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 137 GSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTSWTGLVCSTALIL--AFMVKAPLYGLHL 214
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRALLEAGAALLlvVFLIKAAMWPLNF 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 215 WLPKAHVEA--PIAGSMllaALLLKLGGYGIMRVTILV-NPPSNNLHYPFITLALWGALMTSAI----CLRQIDLKALIA 287
Cdd:PRK12666 232 WLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLfGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRLAA 308
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2445584303 288 YSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12666 309 YLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
199-398 |
9.53e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.44 E-value: 9.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 199 LILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVT--------ILVNPPSNNLhypFITLALWGAL 270
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkanfVFTTLPFNNV---FMILAALAIV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 271 MTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANT---NYERTHSRILLltrG 347
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---N 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2445584303 348 LQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFN---WSSLTLILTGT 398
Cdd:PRK12662 369 LWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKsnaWIGLVVLLVGS 422
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
112-402 |
1.06e-07 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 54.21 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 112 ASELMLFYIAFEATLIPTLILITRWGSqPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTMSTswt 191
Cdd:PRK06525 132 SSTLLGLLLFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY--- 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 192 gLVCSTALILAFMVKAPLYgLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRVTILVNPPSNNLHYPFITL 264
Cdd:PRK06525 208 -LVFLGILFAAWGKSAQLP-FYSWLPDA-MEAPTpasaylhAASMVKV------GVYIFARAIQSMGPIPHVIGYVGAVM 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 265 ALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQ---TQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:PRK06525 279 AIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRL 358
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2445584303 342 LLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILTGTAILL 402
Cdd:PRK06525 359 LPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
107-411 |
2.00e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 50.31 E-value: 2.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 107 LLAFS--------ASELMLFYIAFEATLIPTLILItrwGSQPERLN---AGIYLLFYTLASSLPLLIAILHLQNQIGTLY 175
Cdd:PRK12644 112 LVAFAgamfglvtSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYR 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 176 LPMLkLSHPtmstsWTGLVCSTALILAF---MVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMR 245
Cdd:PRK12644 189 LSEL-LADP-----PTGPAVSVAVVLILvgaLSKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVAR 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 246 VTilvnPPSNNL---HYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLT 322
Cdd:PRK12644 256 LA----PGFADVpvwRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALF 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 323 SSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSL----TLILTGT 398
Cdd:PRK12644 332 KAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGI 411
|
330
....*....|....*
gi 2445584303 399 AI--LLTASYTLYML 411
Cdd:PRK12644 412 VLgsILTVAYSLRFL 426
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-323 |
2.29e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 49.73 E-value: 2.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 9 IMLLPLTFLSPNKHLWTNTTMHSFLIAAASLQWLVPTYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMASQNHLEQEP 88
Cdd:COG1007 19 VLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 89 aIRKRIFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGI-YLLFYTLASSLpLLIAILHL 167
Cdd:COG1007 99 -LLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 168 QNQIGTLYLPMLKLSHPTMSTSWTGLVCSTALILA-FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRV 246
Cdd:COG1007 177 YGATGSLNLAGIAAALAAGGANSPLLLLGLVLVLAgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRL 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 247 TILVNPP-SNNLHYPFITLA----LWGALMTsaicLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGL 321
Cdd:COG1007 257 LVEAFPGlAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLF 332
|
..
gi 2445584303 322 TS 323
Cdd:COG1007 333 MN 334
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-449 |
1.38e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 47.38 E-value: 1.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 95 FLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTL 174
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 175 YLPMLKLSHPTMSTSWTGLVCSTALILAfMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRVTILVNPP 253
Cdd:MTH00020 193 DFSSVFNMVVSAPSSDITLICLFLFIGA-VGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIRSSPLFEQA 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 254 SNNLHYPFITLALwGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTqwaFSGAMILMISHGLTSSMLFCLANT- 332
Cdd:MTH00020 271 PLALIIVTIVGSL-TVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSv 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 333 ----NYERTHSRIllltRGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLI--LTGTAILLTASY 406
Cdd:MTH00020 347 ihalSDEQDMRKM----GGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFY 422
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2445584303 407 TLYMLmitqrgtlpsHITSIQNSSTREHLLMALH------MIPMTLLIL 449
Cdd:MTH00020 423 SIRLI----------YLTFLSNTNLKKAVFFHLHegdwnlLLPLGILAL 461
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
256-371 |
1.26e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 44.25 E-value: 1.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 256 NLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYE 335
Cdd:PRK06277 264 SAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSY 343
|
90 100 110
....*....|....*....|....*....|....*.
gi 2445584303 336 RTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPP 371
Cdd:PRK06277 344 RTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-371 |
4.65e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.89 E-value: 4.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 106 ILLAFSASELMLFyIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPT 185
Cdd:PRK12649 125 IGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSEL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 186 MSTSWTGLVCSTALILAFM---VKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRVtilvNPPSNNLHYPF 261
Cdd:PRK12649 204 IENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGvYLVARI----HPIFSGTEAWF 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 262 ITLALWG---ALMTSAICLRQIDLKALIAYSSVSHMGLVVA----ATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNY 334
Cdd:PRK12649 279 ILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTmygyTTYHEPGLGVAAATFHLLNHATFKACLFLVAGIVA 358
|
250 260 270
....*....|....*....|....*....|....*..
gi 2445584303 335 ERTHSRILLLTRGLQPLLPLMAIWWLLANLTNMALPP 371
Cdd:PRK12649 359 HEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-387 |
6.00e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.12 E-value: 6.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 200 ILAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTILVNPPSNNLHYPFITLALWGALMTSAICLRQ 279
Cdd:PRK08042 187 VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALME 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 280 IDLKALIAYSSVSHMGLVV-----AATMIQTQ------WAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL 348
Cdd:PRK08042 267 HNIQRLLAYHTLENIGIILlglgaGVTGIALEqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGI 346
|
170 180 190
....*....|....*....|....*....|....*....
gi 2445584303 349 QPLLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFN 387
Cdd:PRK08042 347 GKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-380 |
6.21e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.25 E-value: 6.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 59 DQISSPLLVLSCWLLPLMIMASQNHLEQEPAIRKriFLTTMILAQPFILLAFSASELMLFYIAFEATLIPTLILITRWGS 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPR--FLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 139 QPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLK---LSHPTMSTSWTGLVCSTA-----------LILAFM 204
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESplapfaiigilLLIGCI 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 205 VKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMrvtILVNPPSNNLHYPFITLALWGAL---MTSAICLRQID 281
Cdd:MTH00032 237 GKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLM---IRSFPLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 282 LKALIAYSSVSHMGLVVaaTMIQTQWAFSGAMILMISHGLTSSMLFCLA-----NTNYERTHSRILlltRGLQPLLPLMA 356
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTY 387
|
330 340
....*....|....*....|....*....
gi 2445584303 357 IWWLLANLTNMALPPTT-----NLMAELT 380
Cdd:MTH00032 388 TMMLIGSFSIMGLPYLTgfyskDLILELT 416
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
112-327 |
6.47e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 42.19 E-value: 6.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 112 ASELMLFYIAFEATLIPTLILItrWGS-QPERLNAGI-YLLFYTLASSLPLLIAILHLQnQIGTL-YLPMLKLSHPtmst 188
Cdd:PRK12668 112 AGDLLTLFVFWELMAFTSTFLV--WARgTKAAVRAGFrYLLVHVLGGVLLLAGILLHYA-ETGSFaFGAIAGLGGT---- 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 189 swtglvcSTALIL-AFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVtilvnppsnnlhYP-FITLAL 266
Cdd:PRK12668 185 -------AAWLILiGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARA------------FPgTELLIY 245
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2445584303 267 WGALMT--SAI-CLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLF 327
Cdd:PRK12668 246 IGAAMAvyGVFfALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
277-323 |
1.00e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 41.34 E-value: 1.00e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2445584303 277 LRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
94-396 |
6.10e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 38.61 E-value: 6.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 94 IFLTTMILAQpfiLLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILhlqnqigt 173
Cdd:MTH00011 10 LFSSTMTLGT---LMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM-------- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 174 LYLPMLKLSHPTMSTswtglvcstaLILAFMVKAPLYGLHLWLPKahveapIAGSMLLAALLLKLGGYGIMRVTILVNPP 253
Cdd:MTH00011 79 MWSFPSLLKNITALM----------LLVSLMLKLGMAPCHFWFPS------VMSSISWTLCLILSTWQKIAPLSILFFFT 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2445584303 254 SNNLHYPFITLALWGALMTSAICLRQIDLKALIAYSSVSHMGLVvaaTMIQTQWAFSGAMILMISHGLTSSMLFCLANTN 333
Cdd:MTH00011 143 SHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWM---TMISVFSPSMAILYFMTYIIITTPLMLLFAYLN 219
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2445584303 334 YERTHSRILLLTRGlqpllPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSSLTLILT 396
Cdd:MTH00011 220 AFSTKFNSKISSMS-----QTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLV 277
|
|
| |
