Conserved domains on
[gi|2528825974|gb|WJN62427|]
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polyprotein, partial [Hepacivirus hominis]
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
HCV_core super family | cl46603 | Hepatitis C virus core protein; The viral core protein forms the internal viral coat that ... |
1-57 | 5.17e-19 | ||
Hepatitis C virus core protein; The viral core protein forms the internal viral coat that encapsidates the genomic RNA and is enveloped in a host cell-derived lipid membrane. The core protein has been shown, by yeast two-hybrid assay to interact with cellular DEAD box helicases. The N terminus of the core protein is involved in transcriptional repression. The actual alignment was detected with superfamily member pfam01543: Pssm-ID: 480943 Cd Length: 121 Bit Score: 74.35 E-value: 5.17e-19
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Name | Accession | Description | Interval | E-value | ||
HCV_capsid | pfam01543 | Hepatitis C virus capsid protein; |
1-57 | 5.17e-19 | ||
Hepatitis C virus capsid protein; Pssm-ID: 144947 Cd Length: 121 Bit Score: 74.35 E-value: 5.17e-19
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Name | Accession | Description | Interval | E-value | ||
HCV_capsid | pfam01543 | Hepatitis C virus capsid protein; |
1-57 | 5.17e-19 | ||
Hepatitis C virus capsid protein; Pssm-ID: 144947 Cd Length: 121 Bit Score: 74.35 E-value: 5.17e-19
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Blast search parameters | ||||
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