|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
2-270 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 519.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 2 KTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIA 81
Cdd:MTH00119 112 ETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 82 GLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIKP 161
Cdd:MTH00119 192 GLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKP 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 162 EWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFIII 241
Cdd:MTH00119 272 EWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIII 351
|
250 260
....*....|....*....|....*....
gi 2553043303 242 GQLASISYFVIILVLFPLAAALENKLLKL 270
Cdd:MTH00119 352 GQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-269 |
4.65e-176 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 489.92 E-value: 4.65e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 1 TKTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVI 80
Cdd:MTH00100 110 LETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFII 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 81 AGLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIK 160
Cdd:MTH00100 190 TALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIK 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 161 PEWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFII 240
Cdd:MTH00100 270 PEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFII 349
|
250 260
....*....|....*....|....*....
gi 2553043303 241 IGQLASISYFVIILVLFPLAAALENKLLK 269
Cdd:MTH00100 350 IGQLASILYFLIILILMPIASLIENNLLK 378
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
3-269 |
1.58e-172 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 481.07 E-value: 1.58e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 3 TWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAG 82
Cdd:MTH00131 112 TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 83 LTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIKPE 162
Cdd:MTH00131 192 ATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPE 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 163 WYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFIIIG 242
Cdd:MTH00131 272 WYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVEHPFIIIG 351
|
250 260
....*....|....*....|....*..
gi 2553043303 243 QLASISYFVIILVLFPLAAALENKLLK 269
Cdd:MTH00131 352 QVASVLYFSLFLVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
2-270 |
1.95e-164 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 460.69 E-value: 1.95e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 2 KTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIA 81
Cdd:MTH00074 112 ETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 82 GLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIKP 161
Cdd:MTH00074 192 GASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQP 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 162 EWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFIII 241
Cdd:MTH00074 272 EWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVEDPFIEI 351
|
250 260
....*....|....*....|....*....
gi 2553043303 242 GQLASISYFVIILVLFPLAAALENKLLKL 270
Cdd:MTH00074 352 GQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-259 |
6.19e-158 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 443.59 E-value: 6.19e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 1 TKTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVI 80
Cdd:MTH00191 107 KETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLI 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 81 AGLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIK 160
Cdd:MTH00191 187 AALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIK 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 161 PEWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFII 240
Cdd:MTH00191 267 PEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVEDPFIL 346
|
250
....*....|....*....
gi 2553043303 241 IGQLASISYFVIILVLFPL 259
Cdd:MTH00191 347 LGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-257 |
1.34e-155 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 437.29 E-value: 1.34e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 1 TKTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVI 80
Cdd:MTH00156 100 KHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFII 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 81 AGLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIK 160
Cdd:MTH00156 180 LAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQ 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 161 PEWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFII 240
Cdd:MTH00156 260 PEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYIL 339
|
250
....*....|....*..
gi 2553043303 241 IGQLASISYFVIILVLF 257
Cdd:MTH00156 340 TGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
2-268 |
1.53e-151 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 427.78 E-value: 1.53e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 2 KTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIA 81
Cdd:MTH00145 112 HTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVIL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 82 GLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIKP 161
Cdd:MTH00145 192 GLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQP 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 162 EWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFIII 241
Cdd:MTH00145 272 EWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVEEPYETI 351
|
250 260
....*....|....*....|....*..
gi 2553043303 242 GQLASISYFVIILVLfPLAAALENKLL 268
Cdd:MTH00145 352 GQVFTVLYFLFFLIL-PLVQKLWDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
3-268 |
9.89e-150 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 423.35 E-value: 9.89e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 3 TWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAG 82
Cdd:MTH00034 112 TWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 83 LTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIKPE 162
Cdd:MTH00034 192 LSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPE 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 163 WYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFIIIG 242
Cdd:MTH00034 272 WYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVEYPFILLG 351
|
250 260
....*....|....*....|....*.
gi 2553043303 243 QLASISYFVIILVLFPLAAALENKLL 268
Cdd:MTH00034 352 QVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-269 |
2.85e-142 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 404.44 E-value: 2.85e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 1 TKTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVI 80
Cdd:MTH00016 111 METWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVI 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 81 AGLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIK 160
Cdd:MTH00016 191 AALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIK 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 161 PEWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFII 240
Cdd:MTH00016 271 PEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVEPPYEF 350
|
250 260
....*....|....*....|....*....
gi 2553043303 241 IGQLASISYFvIILVLFPLAAALENKLLK 269
Cdd:MTH00016 351 LGQIFTVFYF-FYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
2-270 |
1.40e-130 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 374.81 E-value: 1.40e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 2 KTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIA 81
Cdd:MTH00053 112 IVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 82 GLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIKP 161
Cdd:MTH00053 192 GLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKP 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 162 EWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFIII 241
Cdd:MTH00053 272 EWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVEEPYILI 351
|
250 260
....*....|....*....|....*....
gi 2553043303 242 GQLASISYFVIILVLFPLAAALENKLLKL 270
Cdd:MTH00053 352 GQIASIFYFAYFLILMPLAGYLENKLLKL 380
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-269 |
1.82e-129 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 371.73 E-value: 1.82e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 1 TKTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVI 80
Cdd:MTH00022 109 FHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFIL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 81 AGLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIK 160
Cdd:MTH00022 189 AFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQ 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 161 PEWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFII 240
Cdd:MTH00022 269 PEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVEEPFIL 348
|
250 260
....*....|....*....|....*....
gi 2553043303 241 IGQLASISYFVIILVLFPLAAALENKLLK 269
Cdd:MTH00022 349 IGQLLSFFYFFYFLVLIPLLGELENQLLF 377
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
2-269 |
1.02e-117 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 342.29 E-value: 1.02e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 2 KTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIA 81
Cdd:MTH00224 112 ETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIM 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 82 GLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIKP 161
Cdd:MTH00224 192 GATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKP 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 162 EWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFIII 241
Cdd:MTH00224 272 EWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVEDPFEGI 351
|
250 260
....*....|....*....|....*...
gi 2553043303 242 GQLASISYFvIILVLFPLAAALENKLLK 269
Cdd:MTH00224 352 GQVFTILYF-SYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
3-265 |
2.78e-93 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 279.90 E-value: 2.78e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 3 TWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAG 82
Cdd:MTH00033 109 TWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVG 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 83 LTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFS--PNMLGDPENFTPANPLVTPPHIK 160
Cdd:MTH00033 189 LVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPENFIQANPLVTPVHIQ 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 161 PEWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPV-EHPFI 239
Cdd:MTH00033 269 PEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAPAgADPYV 348
|
250 260
....*....|....*....|....*.
gi 2553043303 240 IIGQLASISYFVIILVLFPLAAALEN 265
Cdd:MTH00033 349 LIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
3-264 |
2.79e-88 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 267.43 E-value: 2.79e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 3 TWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFVIA 81
Cdd:COG1290 123 NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 82 GLTLVHLTFLHETGSNNPMGI----PSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNmlGDPENFTPANPLVTPP 157
Cdd:COG1290 203 ALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 158 HIKPEWYFLFAYAILRSIP--NKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTWVGSQPVe 235
Cdd:COG1290 281 HIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP- 359
|
250 260
....*....|....*....|....*....
gi 2553043303 236 hPFIIIGQLASISYFVIILVLFPLAAALE 264
Cdd:COG1290 360 -IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
2-257 |
2.63e-82 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 251.01 E-value: 2.63e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 2 KTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIA 81
Cdd:MTH00086 100 KVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLL 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 82 GLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFaLLASMALFSPNMLGDPENFTPANPLVTPPHIKP 161
Cdd:MTH00086 180 VLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVP 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 162 EWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSklrSMTFRPISQILFWTLVANVLVLTWVGSQPVEHPFIII 241
Cdd:MTH00086 259 EWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWLGQCLVEYPFLFL 335
|
250
....*....|....*.
gi 2553043303 242 GQLASISYFVIILVLF 257
Cdd:MTH00086 336 SQIFSFIYFFLILLML 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
4-257 |
2.79e-68 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 215.23 E-value: 2.79e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 4 WNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGL 83
Cdd:MTH00046 104 WNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 84 TLVHLTFLHETGSNNPMGIPSD-CDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIKPE 162
Cdd:MTH00046 184 MVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPE 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 163 WYFLFAYAILRSIPNKLGGvLALAASILVLFLLPLLHTSKLRSMtfrpISQILFWTLVANVLVLTWVGSQPVEHPFIIIG 242
Cdd:MTH00046 264 WYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLIVSLFFSLSYLGGCHPEYPYLLIS 338
|
250
....*....|....*
gi 2553043303 243 QLASISyFVIILVLF 257
Cdd:MTH00046 339 QLFSVL-MVLLLFIF 352
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
98-245 |
2.76e-52 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 167.05 E-value: 2.76e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 98 NPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 177
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2553043303 178 KLGGVLALAASILVLFLLPLLHTSKLRSmTFRPISQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLA 245
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-97 |
8.56e-46 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 152.52 E-value: 8.56e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 2 KTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIA 81
Cdd:cd00284 105 LTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIA 184
|
90
....*....|....*.
gi 2553043303 82 GLTLVHLTFLHETGSN 97
Cdd:cd00284 185 VIVILHLLFLHEQGSS 200
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
149-249 |
7.43e-43 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 141.46 E-value: 7.43e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 149 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPISQILFWTLVANVLVLTW 228
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2553043303 229 VGSQPVEHPFIIIGQLASISY 249
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
2-95 |
1.55e-40 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 138.67 E-value: 1.55e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 2 KTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIA 81
Cdd:pfam00033 96 LTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILA 175
|
90
....*....|....
gi 2553043303 82 GLTLVHLTFLHETG 95
Cdd:pfam00033 176 ILMLLHLLFLHETG 189
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
3-144 |
5.88e-39 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 133.91 E-value: 5.88e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 3 TWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHF-LLPFVIA 81
Cdd:pfam13631 27 NWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLFGGPFPGTATIPRFYALHIlLLPGLIL 106
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2553043303 82 GLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDILGFVLMFALLASMALFSPNMLGDP 144
Cdd:pfam13631 107 ALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQINPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
3-100 |
2.34e-18 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 81.30 E-value: 2.34e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 3 TWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFVIA 81
Cdd:PRK03735 125 NWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALA 204
|
90
....*....|....*....
gi 2553043303 82 GLTLVHLTFLHETGSNNPM 100
Cdd:PRK03735 205 VLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
3-100 |
5.79e-17 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 77.45 E-value: 5.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2553043303 3 TWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFVIA 81
Cdd:CHL00070 117 TWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTA 196
|
90
....*....|....*....
gi 2553043303 82 GLTLVHLTFLHETGSNNPM 100
Cdd:CHL00070 197 VFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
120-187 |
3.12e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 60.40 E-value: 3.12e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2553043303 120 ILGfvlMFALLASMALFSPNMLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAA 187
Cdd:CHL00058 44 ILG---TIACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMAS 103
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
127-187 |
1.39e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 58.65 E-value: 1.39e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2553043303 127 FALLASMALFSPNMLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAA 187
Cdd:COG5679 49 IALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAA 104
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
127-187 |
1.25e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 55.96 E-value: 1.25e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2553043303 127 FALLASMALFSPNMLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAA 187
Cdd:TIGR01156 48 IACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAA 103
|
|
|