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Conserved domains on  [gi|2563316452|gb|WLS85648|]
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septum formation initiator family protein [Lactobacillus apis]

Protein Classification

septum formation initiator family protein( domain architecture ID 10006792)

septum formation initiator family protein similar to Bacillus subtilis cell division protein DivIC, which is required for vegetative and sporulation septum formation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FtsB COG2919
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
34-125 1.31e-12

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 59.12  E-value: 1.31e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563316452  34 IRRNRIIAVFLVLFALLGIQLTV---TRVQTQRINEQVQTQKKSLSQIDKQKRALTAKRDDLKD-PDYVAKLVRFKFLYS 109
Cdd:COG2919     1 RMRLLRTLVLLLLLAYLQYHLWFgdgGLLAYRELRQEIAELEAENAKLKARNAELEAEVADLKDgPDYIEERAREELGMV 80

                          90
                  ....*....|....*.
gi 2563316452 110 KPNETIYNLPEGKDDN 125
Cdd:COG2919    81 KPGETFYRVPDPEKAA 96
 
Name Accession Description Interval E-value
FtsB COG2919
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
34-125 1.31e-12

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 59.12  E-value: 1.31e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563316452  34 IRRNRIIAVFLVLFALLGIQLTV---TRVQTQRINEQVQTQKKSLSQIDKQKRALTAKRDDLKD-PDYVAKLVRFKFLYS 109
Cdd:COG2919     1 RMRLLRTLVLLLLLAYLQYHLWFgdgGLLAYRELRQEIAELEAENAKLKARNAELEAEVADLKDgPDYIEERAREELGMV 80

                          90
                  ....*....|....*.
gi 2563316452 110 KPNETIYNLPEGKDDN 125
Cdd:COG2919    81 KPGETFYRVPDPEKAA 96
DivIC pfam04977
Septum formation initiator; DivIC from B. subtilis is necessary for both vegetative and ...
 59-120 7.79e-09

Septum formation initiator; DivIC from B. subtilis is necessary for both vegetative and sporulation septum formation. These proteins are mainly composed of an amino terminal coiled-coil.


Pssm-ID: 428231 [Multi-domain]  Cd Length: 69  Bit Score: 48.75  E-value: 7.79e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2563316452  59 VQTQRINEQVQTQKKSLSQIDKQKRALTAKRDDLK-DPDYVAKLVRFKFLYSKPNETIYNLPE 120
Cdd:pfam04977   6 LTYYQLKQEIAQLQAEIAKLKQENEELEAEIKDLKsDPDYIEERARSELGMVKPGETVYRVVE 68
 
Name Accession Description Interval E-value
FtsB COG2919
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
34-125 1.31e-12

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 59.12  E-value: 1.31e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563316452  34 IRRNRIIAVFLVLFALLGIQLTV---TRVQTQRINEQVQTQKKSLSQIDKQKRALTAKRDDLKD-PDYVAKLVRFKFLYS 109
Cdd:COG2919     1 RMRLLRTLVLLLLLAYLQYHLWFgdgGLLAYRELRQEIAELEAENAKLKARNAELEAEVADLKDgPDYIEERAREELGMV 80

                          90
                  ....*....|....*.
gi 2563316452 110 KPNETIYNLPEGKDDN 125
Cdd:COG2919    81 KPGETFYRVPDPEKAA 96
DivIC pfam04977
Septum formation initiator; DivIC from B. subtilis is necessary for both vegetative and ...
 59-120 7.79e-09

Septum formation initiator; DivIC from B. subtilis is necessary for both vegetative and sporulation septum formation. These proteins are mainly composed of an amino terminal coiled-coil.


Pssm-ID: 428231 [Multi-domain]  Cd Length: 69  Bit Score: 48.75  E-value: 7.79e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2563316452  59 VQTQRINEQVQTQKKSLSQIDKQKRALTAKRDDLK-DPDYVAKLVRFKFLYSKPNETIYNLPE 120
Cdd:pfam04977   6 LTYYQLKQEIAQLQAEIAKLKQENEELEAEIKDLKsDPDYIEERARSELGMVKPGETVYRVVE 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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