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Conserved domains on  [gi|446455949|ref|WP_000533804|]
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MULTISPECIES: DUF2553 family protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2553 super family cl12418
Protein of unknown function (DUF2553); This family of bacterial proteins has no known function.
 6-78 3.89e-15

Protein of unknown function (DUF2553); This family of bacterial proteins has no known function.


The actual alignment was detected with superfamily member pfam10830:

Pssm-ID: 371262  Cd Length: 75  Bit Score: 63.16  E-value: 3.89e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446455949   6 KIDITNKVVAKFRPNYLELYTSKFMIGKFyVYTEDKKYVLEDGYIYENGKFYRIIDTHRGNNQAAEGCDL--GWC 78
Cdd:pfam10830  2 KIDVTDRVTGKLENGGLELYHDNEKIGEM-VETSGNQYELKEGYSFQNEKIYKYEDTTEQPDQKYVDCDDegGWC 75
 
Name Accession Description Interval E-value
DUF2553 pfam10830
Protein of unknown function (DUF2553); This family of bacterial proteins has no known function.
 6-78 3.89e-15

Protein of unknown function (DUF2553); This family of bacterial proteins has no known function.


Pssm-ID: 371262  Cd Length: 75  Bit Score: 63.16  E-value: 3.89e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446455949   6 KIDITNKVVAKFRPNYLELYTSKFMIGKFyVYTEDKKYVLEDGYIYENGKFYRIIDTHRGNNQAAEGCDL--GWC 78
Cdd:pfam10830  2 KIDVTDRVTGKLENGGLELYHDNEKIGEM-VETSGNQYELKEGYSFQNEKIYKYEDTTEQPDQKYVDCDDegGWC 75
 
Name Accession Description Interval E-value
DUF2553 pfam10830
Protein of unknown function (DUF2553); This family of bacterial proteins has no known function.
 6-78 3.89e-15

Protein of unknown function (DUF2553); This family of bacterial proteins has no known function.


Pssm-ID: 371262  Cd Length: 75  Bit Score: 63.16  E-value: 3.89e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446455949   6 KIDITNKVVAKFRPNYLELYTSKFMIGKFyVYTEDKKYVLEDGYIYENGKFYRIIDTHRGNNQAAEGCDL--GWC 78
Cdd:pfam10830  2 KIDVTDRVTGKLENGGLELYHDNEKIGEM-VETSGNQYELKEGYSFQNEKIYKYEDTTEQPDQKYVDCDDegGWC 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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