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Conserved domains on  [gi|446967203|ref|WP_001044459|]
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MULTISPECIES: fimbria/pilus periplasmic chaperone [Salmonella]

Protein Classification

PRK15274 family protein( domain architecture ID 11487717)

PRK15274 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 1-257 0e+00

putative periplasmic fimbrial chaperone protein SteC; Provisional


:

Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 529.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   1 MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP 80
Cdd:PRK15274   1 MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  81 LQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT 160
Cdd:PRK15274  81 LQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203 161 LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT 240
Cdd:PRK15274 161 LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT 240

                        250
                 ....*....|....*..
gi 446967203 241 CKVNEEKTRDAEKKANK 257
Cdd:PRK15274 241 CKVNEEKTRDAEKKANK 257
 
Name Accession Description Interval E-value
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 1-257 0e+00

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 529.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   1 MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP 80
Cdd:PRK15274   1 MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  81 LQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT 160
Cdd:PRK15274  81 LQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203 161 LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT 240
Cdd:PRK15274 161 LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT 240

                        250
                 ....*....|....*..
gi 446967203 241 CKVNEEKTRDAEKKANK 257
Cdd:PRK15274 241 CKVNEEKTRDAEKKANK 257
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
5-229 9.00e-64

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 199.06  E-value: 9.00e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   5 NHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATlPYLAQAWLED----DKFAKDTRYFTALPP 80
Cdd:COG3121    2 KRLLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDwdqdAGPDKATAPFVVTPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  81 LQRIEPKSDGQVKVQPLPaaASLPQDRESLFYFNVREIPPK---SDKPNTLQLALQTRIKFFYRPVAVARQVDKthpWQT 157
Cdd:COG3121   81 LFRLEPGKSQTVRIIRTG--PPLPQDRESLFRLNVDEIPPKdasEEGKNTLQIALRTRIKLFYRPAGLKGSPED---AAE 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446967203 158 KLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASL---GSSPVVGYVDDYGGH 229
Cdd:COG3121  156 KLTWSLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASlaaGGKVTWATINDYGGA 230
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 28-146 3.06e-42

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 140.42  E-value: 3.06e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   28 IVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLEDDKFAKDTRY----FTALPPLQRIEPKSDGQVKVqpLPAAASL 103
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSN-TGDNPYLVQSWVDDGNEEGTDEKakapFIVTPPLFRLEPGQEQVLRI--YTTGPPL 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 446967203  104 PQDRESLFYFNVREIPPKSDKP---NTLQLALQTRIKFFYRPVAVA 146
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDKPKggqNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 1-257 0e+00

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 529.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   1 MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP 80
Cdd:PRK15274   1 MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  81 LQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT 160
Cdd:PRK15274  81 LQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203 161 LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT 240
Cdd:PRK15274 161 LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT 240

                        250
                 ....*....|....*..
gi 446967203 241 CKVNEEKTRDAEKKANK 257
Cdd:PRK15274 241 CKVNEEKTRDAEKKANK 257
PRK15285 PRK15285
fimbrial chaperone StfD;
11-251 4.81e-94

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 276.66  E-value: 4.81e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  11 ALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDG 90
Cdd:PRK15285  10 AAVLLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPVQRIEPSAIG 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  91 QVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARqVDKTHPWQTKLTLTYQGDGVIF 170
Cdd:PRK15285  90 QVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSK-IDMQHPWQYKITLQRQGNGYQV 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203 171 DNPTPFYLVISNAGSKENET-ASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTR 249
Cdd:PRK15285 169 SNPTGYYVVLSNASNRMDGTpARGFSPLVIAPKSNVTLGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAKSR 248


                 ..
gi 446967203 250 DA 251
Cdd:PRK15285 249 KS 250
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
5-229 9.00e-64

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 199.06  E-value: 9.00e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   5 NHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATlPYLAQAWLED----DKFAKDTRYFTALPP 80
Cdd:COG3121    2 KRLLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDwdqdAGPDKATAPFVVTPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  81 LQRIEPKSDGQVKVQPLPaaASLPQDRESLFYFNVREIPPK---SDKPNTLQLALQTRIKFFYRPVAVARQVDKthpWQT 157
Cdd:COG3121   81 LFRLEPGKSQTVRIIRTG--PPLPQDRESLFRLNVDEIPPKdasEEGKNTLQIALRTRIKLFYRPAGLKGSPED---AAE 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446967203 158 KLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASL---GSSPVVGYVDDYGGH 229
Cdd:COG3121  156 KLTWSLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASlaaGGKVTWATINDYGGA 230
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 24-241 4.34e-46

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 154.16  E-value: 4.34e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  24 SHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKdTRYFTALPPLQRIEPKSDGQVKV-QPLPAAAS 102
Cdd:PRK15254  14 SPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVR-TDALMALPPLQRIDAGQKSQVRItQVRGLTDK 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203 103 LPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQvDKTHPwQTKLTLTYQGDGVIFDNPTPFYLVISN 182
Cdd:PRK15254  93 LPQDRETLFWFNVRGVPPKPEDDNVLQLAMQSQLKLFYRPKAIIRS-SSDQP-ERKLTAERNAGHLTLRNPTPYYITVAW 170

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446967203 183 AGSKENETASGFKNLLIAPREKvTSPIKGASLGSSPV--VGYVDDYGGHRLLVFTCSGNTC 241
Cdd:PRK15254 171 LGADRSHRLSGFREGVMVPPLG-SLPLKAVLPAETRTlwVGYIDDYGGLQMNRYACDALNC 230
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 28-146 3.06e-42

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 140.42  E-value: 3.06e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   28 IVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLEDDKFAKDTRY----FTALPPLQRIEPKSDGQVKVqpLPAAASL 103
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSN-TGDNPYLVQSWVDDGNEEGTDEKakapFIVTPPLFRLEPGQEQVLRI--YTTGPPL 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 446967203  104 PQDRESLFYFNVREIPPKSDKP---NTLQLALQTRIKFFYRPVAVA 146
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDKPKggqNGLQLALRSRIKLFYRPAGLA 123
PRK09926 PRK09926
fimbrial chaperone;
1-228 1.12e-41

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 142.94  E-value: 1.12e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   1 MNKTNHFKRQALIASVLLAAPlvSHSAIVPDRTRVIFNGNENSITVTLKN-GNAtlPYLAQAWLEDDKFAKD----TRYF 75
Cdd:PRK09926   2 FFNTKHTTALCFATCMAFSSS--SIADIVISGTRIIYKSDQKDVNVRLENkGNN--PLLVQSWLDTGDDNAEpgsiKVPF 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  76 TALPPLQRIEPKSDGQVKVQPLpAAASLPQDRESLFYFNVREIPPKSDKP-----NTLQLALQTRIKFFYRPVAVarqvd 150
Cdd:PRK09926  78 TATPPVSRIDPKRGQTIKLMYT-ASTALPKDRESVFWFNVLEVPPKPDAEkvanqSLLQLAFRTRIKLFYRPDGL----- 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203 151 KTHPWQTKLTLTY-----QGDGVIF-DNPTPFYLVISNA----GSKENETASGfknlLIAPREKVTSPIKGAS--LGSSP 218
Cdd:PRK09926 152 KGNPSEAPLALKWswagsEGKASLRvTNPTPYYVSFSSGdleaGGKRYPVDSK----MIAPFSDESMKVKGLSgkASSGK 227

                        250
                 ....*....|.
gi 446967203 219 VVGY-VDDYGG 228
Cdd:PRK09926 228 VHFYaINDFGG 238
lfpB PRK15290
fimbrial chaperone;
11-227 2.01e-37

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 131.65  E-value: 2.01e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  11 ALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLedDKFAKDTRY---FTALPPLQRIEPK 87
Cdd:PRK15290  22 AIILSVFLGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWV--DPFNKEDKSkapFTVIPPVSRLEPS 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  88 SDGQVKVQPlPAAASLPQDRESLFYFNVREIPP--KSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPwqtKLTLTYQG 165
Cdd:PRK15290 100 QEKVLRIIH-TKGVSLPDDRESVFWLNIKNIPPsaSNKATNSLEIAVKTRIKLFWRPASIRLIPEDAAP---KVKWRREG 175

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446967203 166 DGVIFDNPTPFYLVISNAGSKENETASGfknlLIAPREKVTSPIKGASLGSSPVVGYVDDYG 227
Cdd:PRK15290 176 RNLIAENPNPIHISVMDVIVDGHDVPLN----MIRPFETLTLPLPANSAGGQMTWRFINDYG 233
PRK15211 PRK15211
fimbrial chaperone;
5-230 5.69e-35

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 124.93  E-value: 5.69e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   5 NHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRI 84
Cdd:PRK15211   1 NKMMKWGLVSLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTN-QADQTYGGQVWIDNTTQGSSTVYMVPAPPFFKV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  85 EPKSDGQVKVqpLPAAASLPQDRESLFYFNVREIP--PKSDKPNTLQLALQTRIKFFYRPVAVArqvDKTHPWQTKLTLT 162
Cdd:PRK15211  80 RPKEKQIIRI--MKTDSALPKDRESLFWLNVQEIPpkPKASEGNVLAVALNTQVKLIYRPKALK---EGRENAEKNLQII 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446967203 163 YQGDGVIFDNPTPFYLVISNAGSKENET--ASGFKN--LLIAPREKVTspIKGASLGSSPVVGYVDDYGGHR 230
Cdd:PRK15211 155 HRGGETYLKNPTPYYFAVTGVKLNGQPVklSDRVMNeiAQLAPFSEVS--LGKLSLNGTVTVQAVNDWGGTQ 224
PRK15249 PRK15249
fimbrial chaperone;
2-201 1.45e-29

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 111.43  E-value: 1.45e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   2 NKTNHFKRQALIASVLLAAPLVSHSAIVP-DRTRVIFNGNENSITVTLKNgNATLPYLAQAWLEDDKFA---KDTRY--F 75
Cdd:PRK15249   3 MDTRHSALYYLIVFLFLALPATASWASVTiLGSRIIYPSTASSVDVQLKN-NDAIPYIVQTWFDDGDMNtspENSSAmpF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  76 TALPPLQRIEPKSdGQVKVQPLPAAASLPQDRESLFYFNVREIPP----KSDKPNTLQLALQTRIKFFYRPVAVARQVDK 151
Cdd:PRK15249  82 IATPPVFRIQPKA-GQVVRVIYNNTKKLPQDRESVFWFNVLQVPPtnigSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNL 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446967203 152 THPWQTKLTLT-YQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAP 201
Cdd:PRK15249 161 AKKLQIKTVNKgSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAP 211
PRK15295 PRK15295
fimbrial assembly chaperone;
8-181 1.19e-26

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 103.10  E-value: 1.19e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   8 KRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATlPYLAQAWL---EDDKFAKDTryFTALPPLQRI 84
Cdd:PRK15295   1 KHIKKSVLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSK-ANLVQSWLsvvDPQVTNKQA--FIITPPLFRL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  85 EPKSDGQVKVqpLPAAASLPQDRESLFYFNVREIPPKSDKP--NTLQLALQTRIKFFYRPVAVARQVDKTHpwQTKLTLT 162
Cdd:PRK15295  78 DAGQKNSIRV--IRSGAPLPADRESMYWLNIKGIPSIDDNAsaNRVEISINTQIKLIYRPPALTKSTPDSQ--SQQLKWQ 153

                        170
                 ....*....|....*....
gi 446967203 163 YQGDGVIFDNPTPFYLVIS 181
Cdd:PRK15295 154 TAGDVITVNNPTPYYMNFA 172
PRK15208 PRK15208
molecular chaperone LpfB;
13-181 4.47e-26

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 101.53  E-value: 4.47e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  13 IASVLLAAPLVSHSAIVP----DRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRyFTALPPLQRIEPKS 88
Cdd:PRK15208   4 ISFTALALALIAQNSFAGgvalSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKTP-FIITPPLFKLDPTK 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  89 DGQVKVqpLPAAASLPQDRESLFYFNVREIPPKSDK---PNTLQLALQTRIKFFYRPVAVARQVdKTHPwqTKLTLTYQG 165
Cdd:PRK15208  83 NNVLRI--VNITNTLPQDRESVYWINVKAIPAKSEDaenKNVLQIAVRTRLKLFYRPAGLKGNS-MDAW--NKLRFTRAG 157

                        170
                 ....*....|....*.
gi 446967203 166 DGVIFDNPTPFYLVIS 181
Cdd:PRK15208 158 NQIKVENPSAFNLTFN 173
PRK15218 PRK15218
fimbrial assembly chaperone;
12-229 3.42e-25

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 99.29  E-value: 3.42e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  12 LIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLEDDKFA----KDTRYFTALPPLQRIEPK 87
Cdd:PRK15218   4 MIALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMN-DGKRSSLIQAWIDNGDTSlppeKLQVPFIMTPPVIRVAAN 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  88 SDGQVKVQPLpaAASLPQDRESLFYFNVREIPPKSDK---PNTLQLALQTRIKFFYRPVAVARqVDKTHPWQTKLTLTYQ 164
Cdd:PRK15218  83 SGQQLKIKKL--ANNLPGDRESLFYLNVLDIPPNSDEnkdKNIIKFALQNRIKLIYRPPGVQK-VDKATFSRLQLLRAPG 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446967203 165 GDGVIFDNPTPFYLVISNAGSKENEtasgfKNLLIAPREkvTSPIKGASLGSSPVVGYVDDYGGH 229
Cdd:PRK15218 160 SISVKNNSANWITIPEIKAKSKVNK-----ETLLLAPWS--SQSITTTVVVNSYTVTLIDDSGNY 217
PRK15195 PRK15195
molecular chaperone FimC;
12-227 3.46e-25

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 99.55  E-value: 3.46e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  12 LIASVLLAAPLVSHSA--IVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDtRYFTALPPLQRIEPKSD 89
Cdd:PRK15195   9 MIIIFYLIISASVHAAggIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKE-KSFIVTPPLFVSEPKSE 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  90 GQVKVqpLPAAASLPQDRESLFYFNVREIPP----KSDKPNTLQLALQTRIKFFYRPVAVARQVDKThpwQTKLTLTYQG 165
Cdd:PRK15195  88 NTLRI--IYAGPPLAADRESLFWMNVKAIPSvdknALEGRNVLQLAILSRIKLFVRPINLQELPEEA---PDTLKFSRSG 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446967203 166 DGVIFDNPTPFYLVISN--AGSKEnetasgFKNLLIAPREKVTSPIKgASLGSSPVVGYVDDYG 227
Cdd:PRK15195 163 NHLKVHNPSPYYVTLVNlqVGSQK------LGNAMIAPKVNSQIPLP-SGVQGKLKFQTVNDYG 219
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 12-229 4.43e-23

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 93.96  E-value: 4.43e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  12 LIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLEDDKFA----KDTRYFTALPPLQRIEPK 87
Cdd:PRK15253  19 LSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVN-QGEQASLVQSWIDDGNTSlppeKIQVPFMLTPPVARVAAE 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  88 SDGQVKVQPLPAaaSLPQDRESLFYFNVREIPPKS---DKPNTLQLALQTRIKFFYRPVAVArQVDKTHpwQTKLTLTYQ 164
Cdd:PRK15253  98 SGQQIKIKKMPN--SLPDNKESLFYLNVLDIPPNSqenAGKNVLKFAMQNRIKLIWRPSRIA-AVTKDS--FQRIGLFRS 172

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446967203 165 GDGVIFDNPTPFYLVISNAgsKENETASGFKNLLIAPREKVTSPIKGASLgSSPVVGYVDDYGGH 229
Cdd:PRK15253 173 NKTVIMKNDTANWITVTDV--KAGNTKINDQTIMLPPLSTQNINMKYAST-SQYEVTIIDDNGNY 234
PRK15246 PRK15246
fimbrial assembly chaperone;
21-230 3.49e-22

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 91.56  E-value: 3.49e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  21 PLVSHSAIVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLEDDKFA----KDTRYFTALPPLQRIEPKSDGQVKVQp 96
Cdd:PRK15246   5 YGPAQAAVNIDRTRIIFASDDVAQSLTLSN-DNTTPMLLQVWTDAGNIDaspdNSKTPLVALPPVFKMQPGELRTLRLL- 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  97 LPAAASLPQDRESLFYFNVREIPPKS----DKPNTLQLALQTRIKFFYRPVAVARQVDKThpwQTKLTLTYQGDGVIFDN 172
Cdd:PRK15246  83 LSSRQQLATDRESLFWLNIYQIPPVTqdikNHPRKLVLPLRLRLKILIRPTGLKAPTEAE---EKKLRFIAKENTIRIVN 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446967203 173 PTPFYLVISNAGSKENEtasgFKNLLIAPREKVTSPIK-GASLGSSPVVGYVDDYGGHR 230
Cdd:PRK15246 160 PTSWYMSLTLTMDNKKS----IGDIMVAPKTALDVPLTrSPTPGASINYAVINDSGNWR 214
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 17-228 6.90e-22

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 90.61  E-value: 6.90e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  17 LLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLED--DKFAKDTRYFTALPPLQRIEPKSDGQVKV 94
Cdd:PRK15299  13 LLCGSLAHAAGINIGTTRVIFHGDAKDASISISN-SDNVPYLIQSWAQSisETGASGDAPFMVTPPLFRLNGGQKNVLRI 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  95 qpLPAAASLPQDRESLFYFNVREIPPKS--DKPNTLQLALQTRIKFFYRPVAVARQVDKThpwQTKLTLTYQGDGVIFDN 172
Cdd:PRK15299  92 --IRTGGNLPEDRESLYWLDIKSIPSSNpdNKHNTLMLAVKAEFKLIYRPKALTQKPEEV---ADRLTWSRQGRTLTVKN 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446967203 173 PTPFYLVIS--NAGSKENETASgfknlLIAPREKVTSPIKGASlgSSPVV-GYVDDYGG 228
Cdd:PRK15299 167 PTPYYMNFAtlSVGSQKVKAPR-----YVAPFGNAQYTLPAAA--SGPIAwSIINDFGG 218
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 7-208 2.30e-15

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 72.87  E-value: 2.30e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   7 FKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRyFTALPPLQRIEP 86
Cdd:PRK15188   8 FLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTD-FIITPPLFVIQP 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  87 KSDGQVKVqpLPAAASLPQDRESLFYFNVREIPPKSDKP---NTLQLALQTRIKFFYRPVAVARQvdkthPWQTKLTLTY 163
Cdd:PRK15188  87 KKENILRI--MYVGPSLPTDRESVFYLNSKAIPSVDKNKltgNSLQIATQSVIKLFIRPKNLAEA-----PAHAPSTLRC 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 446967203 164 QGD--GVIFDNPTPFYLV---ISNAGSKenetasgFKNLLIAPREKVTSP 208
Cdd:PRK15188 160 RNErgQLTITNPSPYYVSmveLYSAGKK-------LPNTMVPPKGAITLP 202
PRK11385 PRK11385
fimbrial chaperone;
4-184 4.80e-14

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 69.39  E-value: 4.80e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   4 TNHFKRQAL----IASVLLAAPLvsHSAIVPDRTRVIFNGNENSITVTLKNGNAtlpylaQAWLEDDKFAKDTRY----- 74
Cdd:PRK11385   2 TNTWNRLALlifaVLSLLVAGEL--QAGVVVGGTRFIFPADRESISILLTNTSQ------ESWLINSKINRPTRWaggea 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  75 ------FTALPPLQRIEPKSDGQVKVQPLPAAAsLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARq 148
Cdd:PRK11385  74 stvpapLLAAPPLILLKPGTTGTLRLLRTESDI-LPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPG- 151

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 446967203 149 vDKTHPWQtKLTLTYQGDGVIFDNPTPFYL----------VISNAG 184
Cdd:PRK11385 152 -DPLEAYQ-QLRWTRNSQGVQLTNPTPYYInliqvsvngkALSNAG 195
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 2-179 2.44e-12

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 64.68  E-value: 2.44e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203   2 NKTNHFKRqaLIASVLLAAPLVSHSA-IVPDRTRVIFNGNENSITVTLKNGNA--TLPYLAQAWLEDDKfakdTRYFTAL 78
Cdd:PRK09918   1 NRFNLFFL--FTALVLLSSSSAVHAAgMVPETSVVIVEESDGEGSINVKNTDSnpILLYTTLVDLPEDK----SKLLLVT 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  79 PPLQRIEPksdGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDkthPWQTk 158
Cdd:PRK09918  75 PPVARVEP---GQSQQVRFILKSGSPLNTEHLLRVSFEGVPPKPGGKNKVVMPIRQDLPVLIQPAALPVVRD---PWKL- 147

                        170       180
                 ....*....|....*....|.
gi 446967203 159 LTLTYQGDGVIFDNPTPfYLV 179
Cdd:PRK09918 148 LVWSISGNNLVVSNPSP-YVV 167
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
24-180 2.53e-11

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 61.64  E-value: 2.53e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  24 SHSAIVPDRTRVIFNGNENSITVTLKNGNATlpylaqAWLEDDKFAKDTRY-----------FTALPPLQRIEPKSDGQV 92
Cdd:PRK15192  20 AQAGVVIGGTRFIYHAGAPALSVPVSNHSEA------SWLIDTHILPGGRWpgtknegnitpFVVTPPLFMLSARQENSM 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  93 KVqpLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHpwqTKLTLTYQGDGVIFDN 172
Cdd:PRK15192  94 RV--VYTGAPLPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPEGLAGNPQQAY---RHLIWSLTPDGATVRN 168


                 ....*...
gi 446967203 173 PTPFYLVI 180
Cdd:PRK15192 169 PTPYYVTL 176
PRK15224 PRK15224
pili assembly chaperone PapD;
33-182 5.75e-10

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 57.83  E-value: 5.75e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  33 TRVIFNGNENSITVTLKNGNaTLPYLAQAWLE-DDKFAKDTryFTALPPLQRIEPKSDGQVKVqpLPAAASLPQDRESLF 111
Cdd:PRK15224  35 TRVIYHAGTAGATLSVSNPQ-NYPILVQSSVKaADKSSPAP--FLVMPPLFRLEANQQSQLRI--VRTGGDMPTDRETLQ 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203 112 YFNVREIPPKSDKPNT--------LQLALQTRIKFFYRPVAVarqvdKTHPWQTKLTLTY--QGDGVIFDNPTPFYLVIS 181
Cdd:PRK15224 110 WVCIKAVPPENEPSDTqakgatldLNLSINVCDKLIFRPDAV-----KGTPEDVAGNLRWveTGNKLKVENPTPFYMNLA 184


                 .
gi 446967203 182 N 182
Cdd:PRK15224 185 S 185
PRK15233 PRK15233
fimbrial chaperone SefB;
33-185 6.46e-09

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 55.12  E-value: 6.46e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203  33 TRVIFNGNENSITVTLKNgNATLPYLAQAWL-EDDKFAKDTryFTALPPLQRIEpkSDGQVKVQPLPAAASLPQDRESLF 111
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMN-EKEYPILVQTQVyNDDKSSKAP--FIVTPPILKVE--SNARTRLKVIPTSNLFNKNEESLY 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967203 112 YFNVREIPPKSDKPN----------TLQLALQTRIKFFYRPvavaRQVD-KTHPWQTKLTLTYQGDGVIFDNPTPFYLVI 180
Cdd:PRK15233 122 WLCVKGVPPLNDNESnnknnittnlNVNVVTNSCIKLIYRP----KTIDlTTMEIADKLKLERKGNSIVIKNPTSSYVNI 197


                 ....*
gi 446967203 181 SNAGS 185
Cdd:PRK15233 198 ANIKS 202
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 171-230 2.41e-08

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 49.57  E-value: 2.41e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446967203  171 DNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGA-SLGSSPVVGYVDDYGGHR 230
Cdd:pfam02753   2 KNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSQTFAGLPApAAGGTVSYTYINDYGGIV 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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