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Conserved domains on  [gi|447065905|ref|WP_001143161|]
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MULTISPECIES: protein YaiA [Bacteria]

Protein Classification

YaiA family protein( domain architecture ID 10013504)

YaiA family protein similar to Escherichia coli protein YaiA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10380 PRK10380
hypothetical protein; Provisional
 1-63 4.15e-34

hypothetical protein; Provisional


:

Pssm-ID: 182421  Cd Length: 63  Bit Score: 110.31  E-value: 4.15e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 447065905  1 MPTRPPYPREAYIVTIEKGTPGQTVTWYQLRADHPKPDSLISEHPTAEEAMDAKKRYEDPDKS 63
Cdd:PRK10380  1 MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDPDKE 63
 
Name Accession Description Interval E-value
PRK10380 PRK10380
hypothetical protein; Provisional
 1-63 4.15e-34

hypothetical protein; Provisional


Pssm-ID: 182421  Cd Length: 63  Bit Score: 110.31  E-value: 4.15e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 447065905  1 MPTRPPYPREAYIVTIEKGTPGQTVTWYQLRADHPKPDSLISEHPTAEEAMDAKKRYEDPDKS 63
Cdd:PRK10380  1 MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDPDKE 63
YaiA pfam16362
YaiA protein; This family of proteins is found in Enterobacteriaceae, where they are ...
 1-62 1.13e-32

YaiA protein; This family of proteins is found in Enterobacteriaceae, where they are immediately downstream of a Shikimate kinase.


Pssm-ID: 435300  Cd Length: 62  Bit Score: 106.72  E-value: 1.13e-32
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 447065905   1 MPTRPPYPREAYIVTIEKGTPGQTVTWYQLRADHPKPDSLISEHPTAEEAMDAKKRYEDPDK 62
Cdd:pfam16362  1 MPTKPPYPREAYIVTKEKGPPGQTVTWYQLRADHPHPNTLISEHPTAQEAMDAKERYEDPDK 62
 
Name Accession Description Interval E-value
PRK10380 PRK10380
hypothetical protein; Provisional
 1-63 4.15e-34

hypothetical protein; Provisional


Pssm-ID: 182421  Cd Length: 63  Bit Score: 110.31  E-value: 4.15e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 447065905  1 MPTRPPYPREAYIVTIEKGTPGQTVTWYQLRADHPKPDSLISEHPTAEEAMDAKKRYEDPDKS 63
Cdd:PRK10380  1 MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDPDKE 63
YaiA pfam16362
YaiA protein; This family of proteins is found in Enterobacteriaceae, where they are ...
 1-62 1.13e-32

YaiA protein; This family of proteins is found in Enterobacteriaceae, where they are immediately downstream of a Shikimate kinase.


Pssm-ID: 435300  Cd Length: 62  Bit Score: 106.72  E-value: 1.13e-32
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 447065905   1 MPTRPPYPREAYIVTIEKGTPGQTVTWYQLRADHPKPDSLISEHPTAEEAMDAKKRYEDPDK 62
Cdd:pfam16362  1 MPTKPPYPREAYIVTKEKGPPGQTVTWYQLRADHPHPNTLISEHPTAQEAMDAKERYEDPDK 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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