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Conserved domains on  [gi|488136439|ref|WP_002207647|]
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preprotein translocase subunit SecG [Helicobacter pylori]

Protein Classification

preprotein translocase subunit SecG( domain architecture ID 10003479)

preprotein translocase subunit SecG is involved in protein export and participates in an early event of protein translocation

Gene Symbol:  secG
Gene Ontology:  GO:0043952|GO:0009306|GO:0015450|GO:0005886
PubMed:  15546659|10732681|10066476|9184221
SCOP:  4004237

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SecG COG1314
Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular ...
 23-84 6.35e-15

Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport];


:

Pssm-ID: 440925  Cd Length: 91  Bit Score: 67.13  E-value: 6.35e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 488136439  23 QKSSSIGLGA--YSGSNDSLFGAKGPASFMAKLTMFLGLLFVINTIALGYFYNKEY-GKSVLDET 84
Cdd:COG1314   23 QSGKGAGLGAafGGGASGTLFGARGAANFLTRATAILAVLFFVLSLVLAYLASRGSsASSVLDQS 87
 
Name Accession Description Interval E-value
SecG COG1314
Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular ...
 23-84 6.35e-15

Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440925  Cd Length: 91  Bit Score: 67.13  E-value: 6.35e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 488136439  23 QKSSSIGLGA--YSGSNDSLFGAKGPASFMAKLTMFLGLLFVINTIALGYFYNKEY-GKSVLDET 84
Cdd:COG1314   23 QSGKGAGLGAafGGGASGTLFGARGAANFLTRATAILAVLFFVLSLVLAYLASRGSsASSVLDQS 87
secG TIGR00810
protein translocase, SecG subunit; This family of proteins forms a complex with SecY and SecE. ...
 23-72 1.35e-11

protein translocase, SecG subunit; This family of proteins forms a complex with SecY and SecE. SecA then recruits the SecYEG complex to form an active protein translocation channel. [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 273280  Cd Length: 73  Bit Score: 57.90  E-value: 1.35e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 488136439   23 QKSSSIGLGAYSGSNDS--LFGAKGPASFMAKLTMFLGLLFVINTIALGYFY 72
Cdd:TIGR00810  22 QSGKGGGLGGAFGGGASqsLFGSRGAEKFLSRLTAVLAVLFFILSLALAYLS 73
SecG pfam03840
Preprotein translocase SecG subunit;
23-70 6.60e-10

Preprotein translocase SecG subunit;


Pssm-ID: 461074  Cd Length: 69  Bit Score: 53.20  E-value: 6.60e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 488136439   23 QKSSSIGL-GAYSGSNDSLF-GAKGPASFMAKLTMFLGLLFVINTIALGY 70
Cdd:pfam03840  20 QSGKGAGLsGAFGGGSDSLFgGSRGAENFLTKITAILAILFFVLSLVLAL 69
 
Name Accession Description Interval E-value
SecG COG1314
Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular ...
 23-84 6.35e-15

Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440925  Cd Length: 91  Bit Score: 67.13  E-value: 6.35e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 488136439  23 QKSSSIGLGA--YSGSNDSLFGAKGPASFMAKLTMFLGLLFVINTIALGYFYNKEY-GKSVLDET 84
Cdd:COG1314   23 QSGKGAGLGAafGGGASGTLFGARGAANFLTRATAILAVLFFVLSLVLAYLASRGSsASSVLDQS 87
secG TIGR00810
protein translocase, SecG subunit; This family of proteins forms a complex with SecY and SecE. ...
 23-72 1.35e-11

protein translocase, SecG subunit; This family of proteins forms a complex with SecY and SecE. SecA then recruits the SecYEG complex to form an active protein translocation channel. [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 273280  Cd Length: 73  Bit Score: 57.90  E-value: 1.35e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 488136439   23 QKSSSIGLGAYSGSNDS--LFGAKGPASFMAKLTMFLGLLFVINTIALGYFY 72
Cdd:TIGR00810  22 QSGKGGGLGGAFGGGASqsLFGSRGAEKFLSRLTAVLAVLFFILSLALAYLS 73
SecG pfam03840
Preprotein translocase SecG subunit;
23-70 6.60e-10

Preprotein translocase SecG subunit;


Pssm-ID: 461074  Cd Length: 69  Bit Score: 53.20  E-value: 6.60e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 488136439   23 QKSSSIGL-GAYSGSNDSLF-GAKGPASFMAKLTMFLGLLFVINTIALGY 70
Cdd:pfam03840  20 QSGKGAGLsGAFGGGSDSLFgGSRGAENFLTKITAILAILFFVLSLVLAL 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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