|
Name |
Accession |
Description |
Interval |
E-value |
| gatA |
TIGR00132 |
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ... |
1-449 |
0e+00 |
|
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 272925 [Multi-domain] Cd Length: 460 Bit Score: 516.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 1 MITLKEALKYSKEELENLKKELNE--KAKKEKKLgAYIEQfLDKDLSVSGEGVPVAIKDNISVKGWELTSASKILQGYIA 78
Cdd:TIGR00132 9 EISIKEVLEASLDRIEANKDKINAflEVTVEKAL-KQAKK-LDKAILTPLAGIPIAVKDNISTKGIVTTCASKILENYIP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 79 PYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQ 158
Cdd:TIGR00132 87 PYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSLGSDTGGSIRQ 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 159 PAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFIKTVPNLNA-NKKLKI 237
Cdd:TIGR00132 167 PASFCGVVGFKPTYGRVSRYGLVAYASSLDQIGPFARTVEDIALLLDVISGHDKRDSTSAKVPDPEFFEELKKdLKGLKV 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 238 AVIENYVNDADSEVKNALLKTIDMLKANGHEIVYKNLLDSKFDIAAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEM 317
Cdd:TIGR00132 247 GVVKEFSEEMDKEVQEKFENALEVLEELGAEIVEVSFPHVKYALPIYYIISPSEASSNLARYDGIRYGYRIEEPNSLKEL 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 318 YVNTRSEGFGEEVKRRILLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKF-DTQKSPMQTY 396
Cdd:TIGR00132 327 YAKTRAEGFGEEVKRRIMLGNYALSAGYYDKYYLKAQKVRTLIIDDFLKLFEEVDVIVSPTAPTLPFKIgEKLDDPLEMY 406
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 488942809 397 LEDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQ 449
Cdd:TIGR00132 407 LSDILTVPANLAGLPAISVPCGVKEKGLPIGLQIIGKCFDDKTLLQVSYAFEQ 459
|
|
| Amidase |
pfam01425 |
Amidase; |
50-441 |
1.75e-144 |
|
Amidase;
Pssm-ID: 396144 [Multi-domain] Cd Length: 442 Bit Score: 419.78 E-value: 1.75e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPG 129
Cdd:pfam01425 50 GVPIAVKDNIDVKGVPTTAGSKALENYPAPYDATVVERLRKAGAVILGKTNMDEFAMGSSTENSVFGPTRNPWDLSRTPG 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 130 GSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAG 209
Cdd:pfam01425 130 GSSGGSAAAVAAGLVPLAIGTDTGGSIRIPASFCGLVGLKPTYGRVSRYGVVGYASSLDQVGPLARSVEDAALLLRVISG 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 210 YDKMDSTSANIE-FIKTVPNLNANKKLKIAVIENYVN-DADSEVKNALLKTIDMLKANGHEIVYKNLLDSKFDIAAYYII 287
Cdd:pfam01425 210 YDPKDSTSLPPPvPDYAEPVKKSLKGLRIGVYREDGYfDLDPEVRRAVEEALAQLEALGHEVVEVDPPSLDYALPLYYLI 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 288 ATAEASANLSRYDGVRygkrsENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEI 367
Cdd:pfam01425 290 APAEASSNLARYDGVP-----SGPDDLSELYPRTRAEGLGDEVKRRIILGNYALSAGYYDKYYLKAQKVRRLIRREFAGL 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488942809 368 LQDCDLIFMPVTPTTAFKFDT-QKSPMQTYLEDVYTIS---VNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLL 441
Cdd:pfam01425 365 FEELDVLLSPTAPTPAPRLGEpDDSPLVMYNLDDFTAGvvpVNLAGLPAISLPAGFTADGLPVGVQIIGKPGDEETLL 442
|
|
| GatA |
COG0154 |
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal ... |
50-449 |
6.67e-140 |
|
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439924 [Multi-domain] Cd Length: 468 Bit Score: 409.16 E-value: 6.67e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPg 129
Cdd:COG0154 74 GVPVAVKDLIDVAGLPTTAGSKALADFVPPYDATVVARLRAAGAVILGKTNMPEFAMGGSTENSAYGPTRNPWDPDRTPg 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 130 gssggsaaavagglalaS------------LGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNV 197
Cdd:COG0154 154 gs------------sggSaaavaaglvplaLGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLDQVGPLARTV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 198 EDAAILYDAIAGYDKMDSTSANIEFIKTVPNLNAN-KKLKIAVIENYVN--DADSEVKNALLKTIDMLKANGHEIVYKNL 274
Cdd:COG0154 222 ADAALLLDVLAGPDPRDPTSAPAPVPDYLAALDRDlKGLRIGVPREYFGgdGVDPEVAAAVEAAAAALEALGAEVVEVDL 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 275 LDSKFDIAAYYIIATAEASANLSrydgvrygkrseniqnlkEMYvNTRSEGFGEEVKRRILLGTFvlssgYYDAYYIKAQ 354
Cdd:COG0154 302 PDLDEALAAYYTIAAAEAAANLA------------------DLL-RTRPEGFGPEVRRRILLGAY-----YSAADYLKAQ 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 355 KARAFIKAKYEEILQDCDLIFMPVTPTTAFKFD---TQKSPMQT--YLEDVYTISVNLAGLGGISVPVAKDKEGLNISAQ 429
Cdd:COG0154 358 RVRALLRRDFAAAFEDYDVLLTPTTPTPAPPIGeldADIDPALAmnYLLDRFTAPANLAGLPALSVPAGFTADGLPVGLQ 437
|
410 420
....*....|....*....|
gi 488942809 430 LICKAYDEQTLLDGALSLEQ 449
Cdd:COG0154 438 LIGPPGDEATLLRLAAALEQ 457
|
|
| PRK07139 |
PRK07139 |
amidase; Provisional |
17-452 |
1.39e-80 |
|
amidase; Provisional
Pssm-ID: 235945 [Multi-domain] Cd Length: 439 Bit Score: 256.13 E-value: 1.39e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 17 NLKKELNE-KAKKEKKLGAYIEQFLDKDLSVSGegVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSP 95
Cdd:PRK07139 7 NFQKALEElKNDKNNAVSYVFDEKNNKDGPLAN--CVFTIKDNFATSEGPTHASSKSLENFKPSYNATVVQKLINAGAKP 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 96 FGRCNMDEFAMGSSTASSCYGKTLNPLNFERVpGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRV 175
Cdd:PRK07139 85 VAKVHCDELGLGGTGLFSAFGLIKNPLDSSKL-VGGSSSGSAATFNKNISFAIGSDTGDSVRLPASFIGKVGFKPSYGAI 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 176 SRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFiktvPNLNANKKLKIAVIeNYVNDADSEVKNAL 255
Cdd:PRK07139 164 SRYGLFAYASSLDTVAYFTHNVNDAIILSKVLFGKDENDLTSVDVKI----NNVKKTKPKKVAYL-DCFKELEEYVAKKY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 256 LKTIDMLKANGHEIVyknLLDSKFDI-----AAYYIIATAEASANLSRYDGVRYGKRSENiQNLKEMYVNTRSEGFGEEV 330
Cdd:PRK07139 239 KKLINILKSENIEVE---KIKIDEKLlkaikPVYKIISYSEASSNLANLNGIAFGNREKG-SSWEEIMINTRSEGFGKMV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 331 KRRILLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSPMQTYLEDVYTISvNLAGL 410
Cdd:PRK07139 315 QKRLILGSYFLEEENQEKYFLKAKKVRRVIKNYYESIHNKFDIVIYPAYADIAPDIDENENKSDNYMDYILTIS-NLVGN 393
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 488942809 411 GGISVPVAKdKEGLNISAQLICKAYDEQTLLDGALSLEQMIK 452
Cdd:PRK07139 394 PSLSIPLGK-YNNLPFNLAIDSKIYDDEKLLSYSLYIEELIK 434
|
|
| MYSc_Myh10 |
cd14920 |
class II myosin heavy chain 10, motor domain; Myosin motor domain of non-muscle myosin heavy ... |
193-345 |
1.43e-03 |
|
class II myosin heavy chain 10, motor domain; Myosin motor domain of non-muscle myosin heavy chain 10 (also called NMMHCB). Mutations in this gene have been associated with May-Hegglin anomaly and developmental defects in brain and heart. Multiple transcript variants encoding different isoforms have been found for this gene. Class II myosins, also called conventional myosins, are the myosin type responsible for producing actomyosin contraction in metazoan muscle and non-muscle cells. Myosin II contains two heavy chains made up of the head (N-terminal) and tail (C-terminal) domains with a coiled-coil morphology that holds the two heavy chains together. The intermediate neck domain is the region creating the angle between the head and tail. It also contains 4 light chains which bind the heavy chains in the "neck" region between the head and tail. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. Class-II myosins are regulated by phosphorylation of the myosin light chain or by binding of Ca2+. A cyclical interaction between myosin and actin provides the driving force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. CyMoBase classifications were used to confirm and identify the myosins in this hierarchy.
Pssm-ID: 276952 [Multi-domain] Cd Length: 673 Bit Score: 41.15 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 193 LTQNVEDAAILYDAIAGYDKMDSTSANIEFIKTVPNLNANKKLkiavienyvNDADSEVKNALLKTIDMLKANGHEIVYK 272
Cdd:cd14920 67 MLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSHKGRKD---------HNIPGELERQLLQANPILESFGNAKTVK 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 273 NLLDSKF--------DIAAYYIIATAEASAnLSRYDGVRYGKRSENIQNLKEMYVntrseGFGEEVKRRILLGTF----V 340
Cdd:cd14920 138 NDNSSRFgkfirinfDVTGYIVGANIETYL-LEKSRAVRQAKDERTFHIFYQLLS-----GAGEHLKSDLLLEGFnnyrF 211
|
....*
gi 488942809 341 LSSGY 345
Cdd:cd14920 212 LSNGY 216
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| gatA |
TIGR00132 |
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ... |
1-449 |
0e+00 |
|
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 272925 [Multi-domain] Cd Length: 460 Bit Score: 516.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 1 MITLKEALKYSKEELENLKKELNE--KAKKEKKLgAYIEQfLDKDLSVSGEGVPVAIKDNISVKGWELTSASKILQGYIA 78
Cdd:TIGR00132 9 EISIKEVLEASLDRIEANKDKINAflEVTVEKAL-KQAKK-LDKAILTPLAGIPIAVKDNISTKGIVTTCASKILENYIP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 79 PYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQ 158
Cdd:TIGR00132 87 PYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSLGSDTGGSIRQ 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 159 PAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFIKTVPNLNA-NKKLKI 237
Cdd:TIGR00132 167 PASFCGVVGFKPTYGRVSRYGLVAYASSLDQIGPFARTVEDIALLLDVISGHDKRDSTSAKVPDPEFFEELKKdLKGLKV 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 238 AVIENYVNDADSEVKNALLKTIDMLKANGHEIVYKNLLDSKFDIAAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEM 317
Cdd:TIGR00132 247 GVVKEFSEEMDKEVQEKFENALEVLEELGAEIVEVSFPHVKYALPIYYIISPSEASSNLARYDGIRYGYRIEEPNSLKEL 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 318 YVNTRSEGFGEEVKRRILLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKF-DTQKSPMQTY 396
Cdd:TIGR00132 327 YAKTRAEGFGEEVKRRIMLGNYALSAGYYDKYYLKAQKVRTLIIDDFLKLFEEVDVIVSPTAPTLPFKIgEKLDDPLEMY 406
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 488942809 397 LEDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQ 449
Cdd:TIGR00132 407 LSDILTVPANLAGLPAISVPCGVKEKGLPIGLQIIGKCFDDKTLLQVSYAFEQ 459
|
|
| Amidase |
pfam01425 |
Amidase; |
50-441 |
1.75e-144 |
|
Amidase;
Pssm-ID: 396144 [Multi-domain] Cd Length: 442 Bit Score: 419.78 E-value: 1.75e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPG 129
Cdd:pfam01425 50 GVPIAVKDNIDVKGVPTTAGSKALENYPAPYDATVVERLRKAGAVILGKTNMDEFAMGSSTENSVFGPTRNPWDLSRTPG 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 130 GSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAG 209
Cdd:pfam01425 130 GSSGGSAAAVAAGLVPLAIGTDTGGSIRIPASFCGLVGLKPTYGRVSRYGVVGYASSLDQVGPLARSVEDAALLLRVISG 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 210 YDKMDSTSANIE-FIKTVPNLNANKKLKIAVIENYVN-DADSEVKNALLKTIDMLKANGHEIVYKNLLDSKFDIAAYYII 287
Cdd:pfam01425 210 YDPKDSTSLPPPvPDYAEPVKKSLKGLRIGVYREDGYfDLDPEVRRAVEEALAQLEALGHEVVEVDPPSLDYALPLYYLI 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 288 ATAEASANLSRYDGVRygkrsENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEI 367
Cdd:pfam01425 290 APAEASSNLARYDGVP-----SGPDDLSELYPRTRAEGLGDEVKRRIILGNYALSAGYYDKYYLKAQKVRRLIRREFAGL 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488942809 368 LQDCDLIFMPVTPTTAFKFDT-QKSPMQTYLEDVYTIS---VNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLL 441
Cdd:pfam01425 365 FEELDVLLSPTAPTPAPRLGEpDDSPLVMYNLDDFTAGvvpVNLAGLPAISLPAGFTADGLPVGVQIIGKPGDEETLL 442
|
|
| GatA |
COG0154 |
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal ... |
50-449 |
6.67e-140 |
|
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439924 [Multi-domain] Cd Length: 468 Bit Score: 409.16 E-value: 6.67e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPg 129
Cdd:COG0154 74 GVPVAVKDLIDVAGLPTTAGSKALADFVPPYDATVVARLRAAGAVILGKTNMPEFAMGGSTENSAYGPTRNPWDPDRTPg 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 130 gssggsaaavagglalaS------------LGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNV 197
Cdd:COG0154 154 gs------------sggSaaavaaglvplaLGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLDQVGPLARTV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 198 EDAAILYDAIAGYDKMDSTSANIEFIKTVPNLNAN-KKLKIAVIENYVN--DADSEVKNALLKTIDMLKANGHEIVYKNL 274
Cdd:COG0154 222 ADAALLLDVLAGPDPRDPTSAPAPVPDYLAALDRDlKGLRIGVPREYFGgdGVDPEVAAAVEAAAAALEALGAEVVEVDL 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 275 LDSKFDIAAYYIIATAEASANLSrydgvrygkrseniqnlkEMYvNTRSEGFGEEVKRRILLGTFvlssgYYDAYYIKAQ 354
Cdd:COG0154 302 PDLDEALAAYYTIAAAEAAANLA------------------DLL-RTRPEGFGPEVRRRILLGAY-----YSAADYLKAQ 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 355 KARAFIKAKYEEILQDCDLIFMPVTPTTAFKFD---TQKSPMQT--YLEDVYTISVNLAGLGGISVPVAKDKEGLNISAQ 429
Cdd:COG0154 358 RVRALLRRDFAAAFEDYDVLLTPTTPTPAPPIGeldADIDPALAmnYLLDRFTAPANLAGLPALSVPAGFTADGLPVGLQ 437
|
410 420
....*....|....*....|
gi 488942809 430 LICKAYDEQTLLDGALSLEQ 449
Cdd:COG0154 438 LIGPPGDEATLLRLAAALEQ 457
|
|
| PRK07139 |
PRK07139 |
amidase; Provisional |
17-452 |
1.39e-80 |
|
amidase; Provisional
Pssm-ID: 235945 [Multi-domain] Cd Length: 439 Bit Score: 256.13 E-value: 1.39e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 17 NLKKELNE-KAKKEKKLGAYIEQFLDKDLSVSGegVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSP 95
Cdd:PRK07139 7 NFQKALEElKNDKNNAVSYVFDEKNNKDGPLAN--CVFTIKDNFATSEGPTHASSKSLENFKPSYNATVVQKLINAGAKP 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 96 FGRCNMDEFAMGSSTASSCYGKTLNPLNFERVpGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRV 175
Cdd:PRK07139 85 VAKVHCDELGLGGTGLFSAFGLIKNPLDSSKL-VGGSSSGSAATFNKNISFAIGSDTGDSVRLPASFIGKVGFKPSYGAI 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 176 SRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFiktvPNLNANKKLKIAVIeNYVNDADSEVKNAL 255
Cdd:PRK07139 164 SRYGLFAYASSLDTVAYFTHNVNDAIILSKVLFGKDENDLTSVDVKI----NNVKKTKPKKVAYL-DCFKELEEYVAKKY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 256 LKTIDMLKANGHEIVyknLLDSKFDI-----AAYYIIATAEASANLSRYDGVRYGKRSENiQNLKEMYVNTRSEGFGEEV 330
Cdd:PRK07139 239 KKLINILKSENIEVE---KIKIDEKLlkaikPVYKIISYSEASSNLANLNGIAFGNREKG-SSWEEIMINTRSEGFGKMV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 331 KRRILLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSPMQTYLEDVYTISvNLAGL 410
Cdd:PRK07139 315 QKRLILGSYFLEEENQEKYFLKAKKVRRVIKNYYESIHNKFDIVIYPAYADIAPDIDENENKSDNYMDYILTIS-NLVGN 393
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 488942809 411 GGISVPVAKdKEGLNISAQLICKAYDEQTLLDGALSLEQMIK 452
Cdd:PRK07139 394 PSLSIPLGK-YNNLPFNLAIDSKIYDDEKLLSYSLYIEELIK 434
|
|
| PRK09201 |
PRK09201 |
AtzE family amidohydrolase; |
50-450 |
4.74e-51 |
|
AtzE family amidohydrolase;
Pssm-ID: 236409 [Multi-domain] Cd Length: 465 Bit Score: 179.39 E-value: 4.74e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKIL-QGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVP 128
Cdd:PRK09201 74 GVPFAVKNLFDVAGLTTLAGSKINrDRPPATRDATAVRRLEAAGAVLVGALNMDEYAYGFTTENSHYGATRNPHDLTRIA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 129 GGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIA 208
Cdd:PRK09201 154 GGSSGGSAAAVAAGLVPFTLGSDTNGSIRVPASLCGIFGLKPTYGRLSRAGSFPFVASLDHIGPFARSVADLALVYDVLQ 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 209 GYDKMDSTSANIEFIKTVPNLNAN-KKLKIAVIENYV-NDADSEVKNALLKTIDMLKAngHEIVykNLLDSKFDIAAYYI 286
Cdd:PRK09201 234 GPDPQDPFQADRPAEPTAPLLDRGaEGLRIAVLGGYFaQWADPEARAAVDRVAKALGA--TREV--ELPEAARARAAAFI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 287 IATAEAsANLSRydgvrygkrseniQNLKemyvnTRSEGFGEEVKRRILLGTFVLSsgyydAYYIKAQKARAFIKAKYEE 366
Cdd:PRK09201 310 ITASEG-GNLHL-------------PALR-----TRPQDFDPASRDRLLAGAMLPA-----AWYVQAQRFRRWFRQAVLE 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 367 ILQDCDLIFMPVTPTTAFKFDTQKspMQTYLEDV--------YTISVNLAGLGGISVPVAKDKeGLNISAQLICKAYDEQ 438
Cdd:PRK09201 366 LFEHVDVLIAPATPCSAPLIGQET--MRIDGVELpvranlgiLTQPISFIGLPVVAVPLRTPG-GLPIGVQLIAAPWRED 442
|
410
....*....|..
gi 488942809 439 TLLDGALSLEQM 450
Cdd:PRK09201 443 LALRAAAALEQQ 454
|
|
| PRK07235 |
PRK07235 |
amidase; Provisional |
26-450 |
3.70e-44 |
|
amidase; Provisional
Pssm-ID: 235979 [Multi-domain] Cd Length: 502 Bit Score: 161.33 E-value: 3.70e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 26 AKKEKKLGAYIEQFldkdlSVSG------EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRC 99
Cdd:PRK07235 65 EAEENPYGAWYVKT-----SIKGaaegklAGKTVALKDNVAVAGVPMMNGSSTLEGFVPSFDATVVTRLLDAGATIVGKA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 100 NMDEFAMGSSTASSCYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYG 179
Cdd:PRK07235 140 TCEDLCFSGGSHTSDPGPVHNPRDPGYSAGGSSSGSAALVAAGEVDMAIGGDQGGSIRIPSAWCGIYGMKPTHGLVPYTG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 180 LASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIefIKTVPNLNANKK----LKIAVIENYVNDADSE--VKN 253
Cdd:PRK07235 220 AFPIERTIDHLGPMTATVRDNALLLEVIAGRDGLDPRQPAQ--PPVDDYTAALDRgvkgLKIGILREGFGLPNSEpeVDE 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 254 ALLKTIDMLKANGHEIVYKNLLDSKFDIAAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVN---TRSEGFGEEV 330
Cdd:PRK07235 298 AVRAAAKRLEDLGATVEEVSIPLHRLALAIWNPIATEGATAQMMLGNGYGFNWKGLYDTGLLDAFGAgwrERADDLSETV 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 331 KRRILLGTFVLSSgYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSPMQTYLEDVY-----TISV 405
Cdd:PRK07235 378 KLVMLLGQYGLER-YHGRYYAKARNLARRLRAAYDEALRKYDLLVMPTTPMVATPLPAPDASREEYVSRALemianTAPF 456
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 488942809 406 NLAGLGGISVPVAKdKEGLNISAQLICKAYDEQTLLDGALSLEQM 450
Cdd:PRK07235 457 DVTGHPAMSVPCGL-VDGLPVGLMLVGRHFDEATILRAAAAFEAS 500
|
|
| PRK07488 |
PRK07488 |
indoleacetamide hydrolase; |
50-452 |
4.57e-40 |
|
indoleacetamide hydrolase;
Pssm-ID: 236030 [Multi-domain] Cd Length: 472 Bit Score: 149.74 E-value: 4.57e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPG 129
Cdd:PRK07488 76 GVPIVIKDNINTAGMPTTAGTPALLGFVPATDAPVVQRLLDAGAVPLGKANMHELAFGITSNNGAFGAVRNPYDPARIAG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 130 GSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAG 209
Cdd:PRK07488 156 GSSGGTAAAVAARLAPAGLGTDTGGSVRIPAALCGVVGLRPTVGRYSGDGVVPISHTRDTVGPIARSVADLALLDAVITG 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 210 YDkmdstsaniefikTVPNLNANKKLKIAVIENYVNDA-DSEVKNALLKTIDMLKANGHEIVYKNLLDSK-FDIAAYYII 287
Cdd:PRK07488 236 DA-------------ALPAPVALAGLRLGVPAAPFWDGlDPDVAAVAEAALAKLAAAGVTFVELDLPGLHeLNEAVGFPI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 288 ATAEASANLsrydgVRYGKRSENIQNLKEMYVNTRSegfgEEVKR--RILLGTFVLSSgyyDAYYIKAQKARAFIKAKYE 365
Cdd:PRK07488 303 ALYEALADL-----RAYLRENGAGVSFEELVARIAS----PDVRAifRDLLDPPQISE---DAYRAALDVGRPRLQAWYR 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 366 EILQD--CDLIFMPVTPTTAFKFDTQKSP---------MQTYLEDVYTISvnLAGLGGISVPVAKDKEGLNISAQLICKA 434
Cdd:PRK07488 371 QAFARhgLDAILFPTTPLTAPPIGDDDTVilngaavptFARVIRNTDPAS--NAGLPGLSLPAGLTPHGLPVGLELDGPA 448
|
410
....*....|....*...
gi 488942809 435 YDEQTLLDGALSLEQMIK 452
Cdd:PRK07488 449 GSDRRLLAIGRALERVLG 466
|
|
| PRK08137 |
PRK08137 |
amidase; Provisional |
50-449 |
1.00e-34 |
|
amidase; Provisional
Pssm-ID: 236161 [Multi-domain] Cd Length: 497 Bit Score: 135.28 E-value: 1.00e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNI-SVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFA-----MGSSTASSCYGKTLNPLN 123
Cdd:PRK08137 75 GIPVLLKDNIdAADPMPTTAGSLALAGNRPTRDAFLVARLRDAGAVILGKANLSEWAnfrstRSSSGWSARGGLTRNPYA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 124 FERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAIL 203
Cdd:PRK08137 155 LDRSPCGSSSGSGAAVAAGLAAVAIGTETDGSITCPAAINGLVGLKPTVGLVSRDGIVPISHSQDTAGPMTRTVADAAAV 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 204 YDAIAGYDKMDSTSANIEFIKT--VPNLNAN--KKLKIAVIENYVNdADSEVKNALLKTIDMLKANGHEIVYKNLLDSKF 279
Cdd:PRK08137 235 LTAIAGGDPADPATASAPAPAVdyVAALDADalRGARLGVARNYLG-YHPEVDAQFERALAELKAAGAVVIDVVDLDDGD 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 280 DIAAYYIIATAEASANLSRY-----DGVRYGKRSENI-----QNLKEMyvntrsEGFGEEvkrriLLGTFVLSSGYYDAY 349
Cdd:PRK08137 314 WGEAEKVVLLHEFKAGLNAYlrstaPHAPVRTLADLIafnraQHAREM------PYFGQE-----LFEQAQAAPGLDDPA 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 350 YIKAqKARAFIKAKYEEI---LQDCDLIFMpVTPTT--AFKFDTQKSpmQTYLEDVYTISVnLAGLGGISVPVAkDKEGL 424
Cdd:PRK08137 383 YLDA-LADAKRLAGPEGIdaaLKEHRLDAL-VAPTTgpAWLIDLING--DSFGGSSSTPAA-VAGYPHLTVPMG-QVQGL 456
|
410 420
....*....|....*....|....*
gi 488942809 425 NISAQLICKAYDEQTLLDGALSLEQ 449
Cdd:PRK08137 457 PVGLSFIGAAWSEARLLELGYAYEQ 481
|
|
| PRK12470 |
PRK12470 |
amidase; Provisional |
2-448 |
3.01e-34 |
|
amidase; Provisional
Pssm-ID: 171524 [Multi-domain] Cd Length: 462 Bit Score: 133.47 E-value: 3.01e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 2 ITLKEALKYSKEELENLKKELN-------EKAKKEkklGAYIEQFLDKDLSVSGEGVPVAIKDNISVKGwELTSASKILQ 74
Cdd:PRK12470 23 LTAPMLLEVYLQRIERLDSHLRayrvvlfDRARAE---AEAAQQRLDAGERLPLLGVPIAIKDDVDVAG-EVTTYGSAGH 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 75 GYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGG 154
Cdd:PRK12470 99 GPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWDPNRTPGGSSGGSAAAVAAGLAPVALGSDGGG 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 155 SVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDStsaniEFIKTVPnlNANKK 234
Cdd:PRK12470 179 SIRIPSTWCGLFGLKPQRDRISLEPHDGAWQGLSVNGPIARSVMDAALLLDATTTVPGPEG-----EFVAAAA--REPGR 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 235 LKIAV-----IENYVNDADSEVKnALLKTIDMLKANGHEIVYKnllDSKFDIAAYyiiataeasAN-LSRYDGvryGKRS 308
Cdd:PRK12470 252 LRIALstrvpTPLPVRCGKQELA-AVHQAGALLRDLGHDVVVR---DPDYPAATY---------ANyLPRFFR---GISD 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 309 ENIQNLKEMYVNTRSegfgEEVKRrilLGTFVlSSGYYDAYyikaQKARAFIKAKYEEILQDCDLIFMPVTPTT-----A 383
Cdd:PRK12470 316 DADAQAHPDRLEART----RAIAR---LGSFF-SDRRMAAL----RAAEVVLSARIQSIFDDVDVVVTPGTATGpsrigA 383
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 488942809 384 FKFDTQKSPMQTYLEDVYTISV-NLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLE 448
Cdd:PRK12470 384 YQRRGAVSTLLLVVQRVPYFQVwNLTGQPAAVVPWDFDGDGLPMSVQLVGRPYDEATLLALAAQIE 449
|
|
| PRK07056 |
PRK07056 |
amidase; Provisional |
49-383 |
7.80e-33 |
|
amidase; Provisional
Pssm-ID: 235921 [Multi-domain] Cd Length: 454 Bit Score: 129.29 E-value: 7.80e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 49 EGVPVAIKDNISVKGWELTSASKILQGYI-APYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNP----LN 123
Cdd:PRK07056 73 AGIPVSVKDLFDVAGQVTRAGSRVLADAPpAAADAPAVARLRRAGAVLIGRTNMTEFAFSGLGLNPHYGTPRNPwrrdVG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 124 FERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAIL 203
Cdd:PRK07056 153 DGRIPGGSSSGAAVSVADGMAAAALGTDTGGSIRIPAALCGLTGFKPTARRVPLQGAVPLSTTLDSIGPLARSVACCALV 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 204 YDAIAGYDKMDSTSANIefiktvpnlnanKKLKIAVIENYVNDA-DSEVKNALLKTIDMLKANGHEIVYKNL--LDSKFD 280
Cdd:PRK07056 233 DAVLAGEEPVVPAARPL------------EGLRLAVPTTVVLDGlDATVAAAFERALKRLSAAGAIIEEIAFpeLAELAE 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 281 IAAYYIIATAEASAnLSRY----DGVRYGKRseniqnlkemyvntrsegfgeeVKRRILLGTFVLSsgyydAYYIKAQKA 356
Cdd:PRK07056 301 INAKGGFSAAESYA-WHRPllarHRDQYDPR----------------------VAARILRGEPMSA-----ADYIDLLAA 352
|
330 340
....*....|....*....|....*..
gi 488942809 357 RAFIKAKYEEILQDCDLIFMPVTPTTA 383
Cdd:PRK07056 353 RAAWIARAAARLARFDALVMPTVPIVP 379
|
|
| PRK06102 |
PRK06102 |
amidase; |
49-452 |
3.56e-31 |
|
amidase;
Pssm-ID: 235698 [Multi-domain] Cd Length: 452 Bit Score: 124.38 E-value: 3.56e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 49 EGVPVAIKDNISVKGWELTSASKILQGYI-APYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLN--FE 125
Cdd:PRK06102 71 DGIPIAWKDLFDVAGSVTTAGSVVLANAApASRDAAVVALLARAGMVSIGRTNMSEFAFSGLGLNPHYGTPVNPRStdVP 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 126 RVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYD 205
Cdd:PRK06102 151 RIPGGSSSGSAVAVAAGLVPVAMGTDTGGSVRIPAAFNGLVGYKATRGRYSMDGVFPLAKSLDSLGPLCRSVRDAVWIDA 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 206 AIAGYDKMDSTSANIefiktvpnlnanKKLKIAVIENYVND-ADSEVKNALLKTIDMLKANGHEIVYKNL--LDSKFD-I 281
Cdd:PRK06102 231 AMRGLTAPDVVRRPL------------AGLRLVVPETVVFDdAEPGVRAAFEAAVERLQAAGALVERQAFpaFQEILDlI 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 282 AAYYIIATAEASA----NLSRYDGVRYGKRseniqnlkemyvntrsegfgeeVKRRILLG-TFVLSSgyydayYIKAQKA 356
Cdd:PRK06102 299 ARHGWLVTAEAFAlhqeRLDGPDAARMDPR----------------------VVKRTRLGrKITASD------YIALLEA 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 357 RAFIKAKYEEILQDCDLIFmpvtPTTAfkfdtQKSPMQTYLE--DVYTISVNLAGL-----G------GISVPVAKDKEG 423
Cdd:PRK06102 351 RERLIAQVTRELGGALLAT----PTVA-----HVAPPLAPLEadDDLFFATNLKTLrntmpGnfldmcGVSLPCGTGAAG 421
|
410 420
....*....|....*....|....*....
gi 488942809 424 LNISAQLICKAYDEQTLLDGALSLEQMIK 452
Cdd:PRK06102 422 MPVGLLLSAPAGRDERLLRAALAVEAVIR 450
|
|
| PRK08186 |
PRK08186 |
allophanate hydrolase; Provisional |
50-449 |
6.34e-30 |
|
allophanate hydrolase; Provisional
Pssm-ID: 236177 [Multi-domain] Cd Length: 600 Bit Score: 122.64 E-value: 6.34e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKILqGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPG 129
Cdd:PRK08186 71 GVPFAVKDNIDVAGLPTTAACPAF-AYTPERDATVVARLRAAGAIVIGKTNLDQFATGLVGTRSPYGAVRNAFDPEYVSG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 130 GSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAG 209
Cdd:PRK08186 150 GSSSGSAVAVALGLVSFALGTDTAGSGRVPAAFNNIVGLKPTLGLLSTRGVVPACRTLDCVSVFALTVDDADAVLAVMAG 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 210 YDKMDSTSaniefiKTVPN---LNANKKLKIAV--IENYVNDADSEVKNALLKTIDMLKANGHEIVyknlldsKFDIAAY 284
Cdd:PRK08186 230 FDPADPYS------RANPAdapAALPAGPRVGVprAAQLEFFGDAEAEAAFAAALARLEALGAELV-------EIDFSPF 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 285 YiiataEASANLsrYDGVRYGKRSENIQNLkemyVNTRSEGFgEEVKRRILLGTFVLSSgyYDAYyiKAQKARAFIKAKY 364
Cdd:PRK08186 297 L-----EAARLL--YEGPWVAERYAAVGEF----LEAHPDAV-DPVVRGIIAGAAAFSA--ADAF--RALYRLAELRRAA 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 365 EEILQDCDLIFMPVTPTtafkfdtqkspMQTyLEDV-------------YTISVNLAGLGGISVPVAKDKEGLNISAQLI 431
Cdd:PRK08186 361 EAVLAGIDALLVPTAPT-----------HPT-IAEVaadpiglnsrlgtYTNFVNLLDLCALAVPAGFRADGLPFGVTLI 428
|
410
....*....|....*...
gi 488942809 432 CKAYDEQTLLDGALSLEQ 449
Cdd:PRK08186 429 APAFADQALADLAARLQA 446
|
|
| PRK07042 |
PRK07042 |
amidase; Provisional |
50-450 |
3.50e-26 |
|
amidase; Provisional
Pssm-ID: 235915 [Multi-domain] Cd Length: 464 Bit Score: 110.45 E-value: 3.50e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPG 129
Cdd:PRK07042 74 GVPVTIKENIATRGVPVPLGTAATDLPPAAADAPPAARLREAGAVILAKTTMPDYGMLSSGLSSFHGLTRNPWDLDQNPG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 130 GSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVS----RYGLAsysssldqIGVLTQNVEDAAILYD 205
Cdd:PRK07042 154 GSSAGAGAAAAAGYGPLHLGTDIGGSVRLPAGWCGIVGLKPSLGRIPidppYTGRC--------AGPMTRTVDDAALLMS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 206 AIAGYDKMDSTS---ANIEFIKTVPNLnanKKLKIAVienyVNDA------DSEVKNALLKTIDMLKANGHEIV------ 270
Cdd:PRK07042 226 VLSRPDARDGTSlppQDIDWSDLDIDV---RGLRIGL----MLDAgcglavDPEVRAAVEAAARRFEAAGAIVEpvppfl 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 271 YKNLLD---------SKFDIAAY----------YIIATAEASANLSRYDGVRygkrseniqnlkemyvntrseGFGEevk 331
Cdd:PRK07042 299 TRAMLDgldrfwrarLWSDLAALpperrakvlpYIRRWAEGGADLSGVEAVR---------------------GFNQ--- 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 332 rrillgTFVLssgyydayyiKAQKARAFikakyeeilQDCDLIFMPVTPTTAFKFDtQKSP----MQTYLEDVYTISVNL 407
Cdd:PRK07042 355 ------TFAM----------RAAAARLF---------AEFDYVLSPVAPVPAFPAE-WASPtndpARPFEHIAFTVPWNM 408
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 488942809 408 AGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQM 450
Cdd:PRK07042 409 SEQPAASINCGFTRDGLPIGLQIVGPRFDDLGVLRLAKAFEGW 451
|
|
| PRK06707 |
PRK06707 |
amidase; Provisional |
17-453 |
4.26e-26 |
|
amidase; Provisional
Pssm-ID: 235855 [Multi-domain] Cd Length: 536 Bit Score: 110.77 E-value: 4.26e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 17 NLKKELNEKAKKE-KKLGAYIEQFLDKDLSvsgeGVPVAIKDNISVKGWELTSA-SKILQGYIAPYDASAIVNLKANGFS 94
Cdd:PRK06707 109 NSVTEINPNAMEEaRKLDQERSRNKKSNLY----GIPVVVKDNVQTAKVMPTSAgTYVLKDWIADQDATIVKQLKEEGAF 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 95 PFGRCNMDEFA-MGSSTASSCY----GKTLNPLN-FERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGF 168
Cdd:PRK06707 185 VLGKANMSEWAnYLSFTMPSGYsgkkGQNLNPYGpIKFDTSGSSSGSATVVAADFAPLAVGTETTGSIVAPAAQQSVVGL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 169 KPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMD---STSANIEFIKTVPNLNAN--KKLKIAVIENy 243
Cdd:PRK06707 265 RPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYDEKDvmtEKVKDKERIDYTKDLSIDglKGKKIGLLFS- 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 244 VNDADSEVKNALLKTIDMLKANGHEIVYKNLLDSKfDIAAYYIIATaEASANLSRYDGVRYgkrSENIQNLKEMYVNTRs 323
Cdd:PRK06707 344 VDQQDENRKAVAEKIRKDLQDAGAILTDYIQLNNG-GVDNLQTLEY-EFKHNVNDYFSQQK---NVPVKSLEEIIAFNK- 417
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 324 egfgEEVKRRIllgtfvlssgYYDAYYIKAQKARAFIKAKYEEILQdcdlifmpvtpttafkfDTQKSPMQTYleDVYTI 403
Cdd:PRK06707 418 ----KDSKRRI----------KYGQTLIEASEKSAITKDEFEKVVQ-----------------TSQENAKKEL--DRYLV 464
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 488942809 404 SVNL----------------AGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQMIKN 453
Cdd:PRK06707 465 EKGLdalvminneevllsavAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKN 530
|
|
| PRK06169 |
PRK06169 |
putative amidase; Provisional |
49-449 |
2.88e-25 |
|
putative amidase; Provisional
Pssm-ID: 180437 [Multi-domain] Cd Length: 466 Bit Score: 107.80 E-value: 2.88e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 49 EGVPVAIKDNISVKGWELTSASK-ILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERV 127
Cdd:PRK06169 73 DGVPVSIKDIFLTRGWPTLRGSRaIDADGPWDVDAPAVARLREAGAVLLGKTTTPEFGWKGVTDSPLYGITRNPWDTRLT 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 128 PGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGlASYSSSLDQIGVLTQNVEDAAILYDAI 207
Cdd:PRK06169 153 AGGSSGGAAAAVALGMGPLSVGTDGGGSVRIPASFCGTFGFKPTFGRVPLYP-ASPFGTLAHVGPMTRTVADAALLLDVI 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 208 AGYDKMDSTSANIEFIKTVPNLNAN-KKLKIAVIEN--YVnDADSEVKNALLKTIDMLKANGHEIVYknlLDSKFD--IA 282
Cdd:PRK06169 232 ARPDARDWSALPPPTTSFLDALDRDvRGLRIAYSPTlgYV-DVDPEVAALVAQAVQRLAALGARVEE---VDPGFSdpVE 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 283 AYYIIATAEASANLSRYdgvrygkrSENIQNLKEmyvntrsEGFGEEVKRrillGTFVLSSGYYDayyikAQKARAFIKA 362
Cdd:PRK06169 308 AFHVLWFAGAARLLRAL--------PPGQRALLD-------PGLRRIAER----GATYSASDYLD-----ATAVRAALGA 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 363 KYEEILQDCDLIFMPVTPTTAFKFDTQ---KSPMQTYLE-DVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQ 438
Cdd:PRK06169 364 RMGAFHERYDLLLTPTLPIPAFEAGHDvppGSGLTDWTQwTPFTYPFNLTQQPAASVPCGFTAAGLPVGLQIVGPRHSDD 443
|
410
....*....|.
gi 488942809 439 TLLDGALSLEQ 449
Cdd:PRK06169 444 LVLRVARAYEQ 454
|
|
| PRK06170 |
PRK06170 |
amidase; Provisional |
50-451 |
4.19e-25 |
|
amidase; Provisional
Pssm-ID: 235723 [Multi-domain] Cd Length: 490 Bit Score: 107.43 E-value: 4.19e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPG 129
Cdd:PRK06170 78 GIPVTVKESFNVAGLPTTWGFPDLRDYVPAEDAVAVARLKAAGAVILGKTNVPLGLQDWQSYNEIYGTTNNPWDLARTPG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 130 GSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLAS-------YSSSLDQIGVLTQNVEDAAI 202
Cdd:PRK06170 158 GSSGGSAAALAAGFGALSIGSDIGGSLRVPAHYCGVYAHKPTLGLVPLRGHIPppapalpGQADLAVAGPMARSARDLAL 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 203 LYDAIAGYDKMDstsANIEFIKTVPNLNAN--KKLKIAVIENY-VNDADSEVKNALLKTIDMLKANGHEI---------- 269
Cdd:PRK06170 238 LLDVMAGPDPLD---GGVAYRLALPPARHGrlKDFRVLVLDEHpLLPTDAAVRAAIERLAAALADAGARVvrhspllpdl 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 270 -----VYKNLLDS----KFDIAAYyiiATAEA-SANLSRYDgvrygkRSENIQNLKEMYVNTRSegfgeevkrrillgtf 339
Cdd:PRK06170 315 aesarLYMRLLFAasaaRFPPDAY---ADAQArAAGLSADD------RSLAAERLRGAVLSHRD---------------- 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 340 vlssgyydayYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSPMQTYLeDV------YTISVNLAGLGGI 413
Cdd:PRK06170 370 ----------WLFADAAREELRAAWRRFFAEFDVVLCPVTPTPAFPHDHAPDPLERRI-DIdgvsypYWDQLVWAGLATL 438
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 488942809 414 S------VPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQMI 451
Cdd:PRK06170 439 PglpataIPIGLSATGLPVGVQIVGPALEDRTPLRLAELLEEEF 482
|
|
| PRK06828 |
PRK06828 |
amidase; Provisional |
35-453 |
1.03e-24 |
|
amidase; Provisional
Pssm-ID: 180715 [Multi-domain] Cd Length: 491 Bit Score: 106.44 E-value: 1.03e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 35 YIEQFLDKDLSVSG-----EGVPVAIKDNISVKGWELTSASKI-LQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGS 108
Cdd:PRK06828 62 FIAEALDHERKIKGvrgplHGIPVLLKDNIETNDSMHTSAGTIaLEQHISSEDAFLVTKLREAGAVILGKANMTELANFM 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 109 STA-----SSCYGKTLNPLN---FERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGL 180
Cdd:PRK06828 142 SFEmwagySARGGQTINPYGtgeDDMFVGGSSTGSAIAVAANFTVVSVGTETDGSILSPAVQNSVVGIKPTVGLISRRGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 181 ASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMD---STSANIEFIKTVPNLNAN--KKLKIAVIEN----YVNDADSEv 251
Cdd:PRK06828 222 IPFTYSQDTAGPFARTVTDAAILLGSLTGVDEKDvvtHKSEGIAEHDYTKYLDANglNGAKIGVYNNapkeYYESGEYD- 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 252 KNALLKTIDMLKANGHEIVyKNLLDSKFDIAAYYIIATAEASANLSRYdgVRYGKRSENIQNLKE-MYVNTRSE----GF 326
Cdd:PRK06828 301 EKLFKETIEVLRSEGATVV-EDIDIPSFHREWSWGVLLYELKHSLDNY--LSKLPSTIPVHSISElMEFNENIAeralKY 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 327 GEE-VKRRILLGTFVLSSGYYDA-----YYIKAQKARAFIKaKYeeilqDCDLIFMPvtpttafkfdtqkspmqTYLEdv 400
Cdd:PRK06828 378 GQTkLERRKDFPNTLRNPEYLNArlediYFSQEQGIDFALE-KY-----NLDAILFP-----------------SYIG-- 432
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 488942809 401 YTISVNlAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQMIKN 453
Cdd:PRK06828 433 STICAK-AGYPSIAIPAGYMEGGRPFGITLASTAFSEGTLIKLAYAFEQATKH 484
|
|
| PRK05962 |
PRK05962 |
amidase; Validated |
49-453 |
2.70e-23 |
|
amidase; Validated
Pssm-ID: 168315 [Multi-domain] Cd Length: 424 Bit Score: 101.39 E-value: 2.70e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 49 EGVPVAIKDNISVKGwELTSASKILQGYIAP--YDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFER 126
Cdd:PRK05962 47 DGRIVSIKDLFDVAG-EPTLAGSVIRRDAPPagADALIVQRLRNAGAVIIGKTHMTEFAFTPVGLNPHYGEPGNAIDPAR 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 127 VPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDA 206
Cdd:PRK05962 126 IPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNGLVGFKPTARRIPLEGAFPLSPSLDSIGPLARTVADCAAADAV 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 207 IAGydkmdSTSANIEFIktvpnlnANKKLKIAVIENYV-NDADSEVKNALLKTIDMLKANG---HEIVYKNLLdSKFDIA 282
Cdd:PRK05962 206 MAG-----EKPIPLEVL-------PVAGLRIGLPKGYLlADMEPDVAAAFEASLAALEKAGariADLAIDDLI-ARLAEA 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 283 -AYYIIATAEASAnlsrydgvrygkrseniqnLKEMYVNTRSEGFGEEVKRRILLGTFVLssgyyDAYYIKAQKARAFIK 361
Cdd:PRK05962 273 tRIGSIAGIEASH-------------------IHADWLADLDANVDIRVKRPLSRRIKVP-----LEAYHRLMRTRAALA 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 362 AKYEEILQDCDLIFMPVTPTTAFKFDTQKSPMQTYL--EDVY---TISVNLAGLGGISVPVAkdkeGLNISAQLICKAYD 436
Cdd:PRK05962 329 RAMDERLAGFDMFALPATPIVAPTIASVSEDEEEYDrvENLLlrnTQVANQFDLCSITLPMP----GMALPAGLMLTARN 404
|
410
....*....|....*....
gi 488942809 437 EQ--TLLDGALSLEQMIKN 453
Cdd:PRK05962 405 GSdrRLLAAAASVEKLLEH 423
|
|
| PRK07869 |
PRK07869 |
amidase; Provisional |
2-449 |
7.14e-23 |
|
amidase; Provisional
Pssm-ID: 181154 [Multi-domain] Cd Length: 468 Bit Score: 100.83 E-value: 7.14e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 2 ITLKEALKYSKEELENLKKELN-------EKAKKEKKLGAYIEQFLDkdlsvsgeGVPVAIKDNISVKGWELTSASKILQ 74
Cdd:PRK07869 29 VSAAEVVEAAIARAEAVNPALNalayaafDRARDRAARPGSQGGFFS--------GVPTFIKDNVDVAGLPTMHGSDAWT 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 75 GYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGG 154
Cdd:PRK07869 101 PRPAKADSDFARQFLATGLISLGKTQLPEFGFSASTEHPRLGPVRNPWNTDYSAGASSGGSAALVAAGVVPIAHANDGGG 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 155 SVRQPAAFCGCVGFKPSYGRVSrygLASYSSSLD-QI---GVLTQNVEDAAILYDAiagydkMDSTSANIEF--IKTV-- 226
Cdd:PRK07869 181 SIRIPAACCGLVGLKPSRGRLP---LDPELRRLPvNIvanGVLTRTVRDTAAFYRE------AERYYRNPKLppIGDVtg 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 227 PnlnANKKLKIAVIENYVN--DADSEVKNALLKTIDMLKANGHEI-VYKNLLDSKF--DIAAYY-IIATAEasanlsryd 300
Cdd:PRK07869 252 P---GKQRLRIAVVTDSVTgrEADPEVREAVLATARLLEELGHRVePVDLPVPASFvdDFLLYWgFLAFAL--------- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 301 gVRYGKRseniqnlkemyvntrseGFGEEVKRRILLGtfvLSSGyYDAYYIK---------AQKARAfiKAKYEEILQDC 371
Cdd:PRK07869 320 -VRGGRR-----------------TFGPSFDRTRLDN---LTLG-LARHARRnlhrlplaiARLRRL--RRVYARFFGTY 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 372 DLIFMPV----TP-----TTAFKFDTQKSPMQTYLedVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLD 442
Cdd:PRK07869 376 DVVLTPTlahtTPeigylDPTQDFDTVLDRLISYV--AFTPLQNATGEPAISLPLGQSSDGLPVGMMFSADVGDEATLLE 453
|
....*..
gi 488942809 443 GALSLEQ 449
Cdd:PRK07869 454 LAYELEE 460
|
|
| PRK06529 |
PRK06529 |
amidase; Provisional |
2-449 |
5.63e-21 |
|
amidase; Provisional
Pssm-ID: 180608 [Multi-domain] Cd Length: 482 Bit Score: 95.27 E-value: 5.63e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 2 ITLKEALKYSKEELENLKKELN-------EKAKKEKKLgayiEQFLDKDLSvsgeGVPVAIKD-NISVKGWELTSASKIL 73
Cdd:PRK06529 18 VTPLELVTQAIYKAKKLNPTLNaivseryEEALEEAKQ----RDFSGKPFA----GVPIFLKDlGQELKGQLSTSGSRLF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 74 QGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTG 153
Cdd:PRK06529 90 KNYQATKTDLYVKRLEDLGFIILGRSNTPEFGFKNISDSSLHGPVNLPFDNSRNAGGSSGGAAALVSSGIVALAAASDGG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 154 GSVRQPAAFCGCVGFKPSYGRVSrYGLASYSS----SLDqiGVLTQNVEDAAILYDAIAGYdKMDSTSANIEFIKTVPNL 229
Cdd:PRK06529 170 GSIRIPASFNGLIGLKPSRGRIP-VGPGSYRGwqgaSVH--FALTKSVRDTRRLLYYLQMY-QMESPFPLATLSKESLFQ 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 230 NANKKLKIAVIENYV--NDADSEVKNALLKTIDMLKANGHEIV--YKNLLDSKFDIAAYYIIATAEASAnlsRYDGVR-- 303
Cdd:PRK06529 246 SLQRPLKIAFYQRSPdgSPVSLDAAKALKQAVTFLREQGHEVVelEEFPLDMTEVMRSYYIMNSVETAA---MFDDIEda 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 304 YGkRSENIQNLKEMYVNTRSEGfgeevkRRILLGTF--VLSSgyYDAYyikaqkarAFIKAKYEEilqDCDLIFMPVTPT 381
Cdd:PRK06529 323 LG-RPMTKDDMETMTWAIYQSG------QDIPAKRYsqVLQK--WDTY--------SATMASFHE---TYDLLLTFTTNT 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 382 TAFK---FD-----------TQKSPMQTYLEDV------------YTISVNLAGLGGISVPVAKDKEGLNISAQLICKAY 435
Cdd:PRK06529 383 PAPKhgqLDpdsklmanlaqAEIFSSEEQQNLVetmfekslaitpYTALANLTGQPAISLPTYETKEGLPMGVQLIAAKG 462
|
490
....*....|....
gi 488942809 436 DEQTLLDGALSLEQ 449
Cdd:PRK06529 463 REDLLLGIAEQFEA 476
|
|
| PRK06061 |
PRK06061 |
amidase; Provisional |
50-448 |
3.58e-20 |
|
amidase; Provisional
Pssm-ID: 235686 [Multi-domain] Cd Length: 483 Bit Score: 92.84 E-value: 3.58e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGweLTSASKIlQGYIAP--YDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERV 127
Cdd:PRK06061 84 GVPIAVKDDVDVAG--VPTAFGT-AGEVPPatADSEVVRRLRAAGAVIVGKTNTCELGQWPFTSGPAFGHTRNPWSRDHT 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 128 PGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAI 207
Cdd:PRK06061 161 PGGSSGGSAAAVAAGLVTAAIGSDGAGSVRIPAAWTHLVGIKPQRGRISTWPLPEAFNGLTVNGPLARTVADAALLLDAA 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 208 AGYDKMD-STSANIefikTVPNL--NANKKLKIAVIENYVNDA-----DSEVKNALLKTIDMLKANGHEIVYKNlLDSKF 279
Cdd:PRK06061 241 SGNHPGDrHRPPPV----TVSDAvgRAPGPLRIALSTRFPFTGfpaklHPEIRAAVRRVAEQLALLGHTVVPAD-PDYGL 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 280 DIAAYYIiatAEASANLSRY-----DGVRYGKRSEniqnlkemyVNTRSegfGEEVKRRILLgtfvlssgyydayyiKAQ 354
Cdd:PRK06061 316 RLGLNFL---PRSTAGLRDWaerlgDPVLLDPRTV---------SNARM---GRLLSQAILR---------------LAR 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 355 KARAFIKAKYEEILQDCDLIfmpVTPTTAfkfdtQKSPMQTYLEDV--------------YTISVNLAGLGGISVPVAKD 420
Cdd:PRK06061 366 AAEAAAQRRVGSIFDIVDVV---LAPTTA-----QPPPRVGAFDRLggwatdramiaacpYTWPWNVLGWPSINVPAGFT 437
|
410 420
....*....|....*....|....*...
gi 488942809 421 KEGLNISAQLICKAYDEQTLLDGALSLE 448
Cdd:PRK06061 438 SDGLPIGAQLMGPANSEPLLISLAAQLE 465
|
|
| PLN02722 |
PLN02722 |
indole-3-acetamide amidohydrolase |
33-447 |
4.87e-20 |
|
indole-3-acetamide amidohydrolase
Pssm-ID: 166363 Cd Length: 422 Bit Score: 91.87 E-value: 4.87e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 33 GAYIEQFLDKDLSVSGE----GVPVAIKDNISVKG---------WELTSASkilqgyiAPYDASAIVNLKANGFSPFGRC 99
Cdd:PLN02722 8 GAFMEKFVLSPTSSSHDlplhGLTFAVKDIFDVEGyvtgfgnpdWARTHSA-------ATSTAPAVLAVLRGGATCVGKT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 100 NMDEFAMGSSTASSCYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYG 179
Cdd:PLN02722 81 IMDEMAYSINGENAHYGTPTNPIAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTVG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 180 LASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFIktvpnlnANKKLKIAVIENyvndadSEVKNALLKTI 259
Cdd:PLN02722 161 VIPMAQSFDTVGWFARDPVILKRVGHVLLQQPDVNPIKPSQIII-------AEDCFQLSSIPH------DRLVQVLVKSV 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 260 DMLKANGHEIVYKNLLD-------------SKFDIAAYYIIATAEASANlsrydGVRYGKRSENIQNLKEmYVNTRSEGF 326
Cdd:PLN02722 228 EKLFGGGDIVKHVNLGDyvedkvpslkhfmSKEIKEQEYNIPSLAALSS-----AMRLLQRYEFKINHGE-WITAVKPEF 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 327 GEEVKRRI--LLGTfvlSSGYYDAYyikaQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSPMQTYLEDVYTIs 404
Cdd:PLN02722 302 GPGISERIweAVRT---TEEKIDAC----QSVKTELRAALTTLLGEFGVLVIPTVPGPPPKLQADPTTLESFRARAFSL- 373
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 488942809 405 VNLAGLGG---ISVPVAKdKEGLNISAQLICKAYDEQTLLDGALSL 447
Cdd:PLN02722 374 LSIAGVSGfcqVSIPLGL-HDNLPVSVSLLAKHGSDGFLLNLVESL 418
|
|
| PRK07486 |
PRK07486 |
amidase; Provisional |
50-211 |
6.19e-20 |
|
amidase; Provisional
Pssm-ID: 236028 [Multi-domain] Cd Length: 484 Bit Score: 92.00 E-value: 6.19e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPG 129
Cdd:PRK07486 80 GMPQAPKDLAPTKGIRTTLGSPIFADQVPQEDAIVVERMRAAGAIFIGKTNTPEFGLGSHTYNPVYGATRNPYDPSRSAG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 130 GSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYglASYSSSLDQIGVL---TQNVEDAAILYDA 206
Cdd:PRK07486 160 GSSGGAAAALALRMLPVADGSDMMGSLRNPAAFNNVYGFRPSQGRVPHG--PGGDVFVQQLGTEgpmGRTVEDVALLLAV 237
|
....*
gi 488942809 207 IAGYD 211
Cdd:PRK07486 238 QAGYD 242
|
|
| PRK07487 |
PRK07487 |
amidase; Provisional |
50-448 |
6.57e-20 |
|
amidase; Provisional
Pssm-ID: 236029 [Multi-domain] Cd Length: 469 Bit Score: 91.95 E-value: 6.57e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 50 GVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSSTASSCYGKTLNPLNFERVPG 129
Cdd:PRK07487 75 GVPVTVKVNVDQAGFATTNGVRLQKDLIAPADSPVVDNLRKAGAVIIGRTNTPAFSYRWFTDNPLHGRTLNPWDPSLTPG 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 130 GSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLD-QI----GVLTQNVEDAAILY 204
Cdd:PRK07487 155 GSSGGAAAAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVPAYNASSPERPIGaQLmsvqGPLARTVADLRLAL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 205 DAIAGYDKMDStsanieFIKTVPNLNANKKLKIAV-IENYVNDADSEVKNALLKTIDMLKANGheivyknlldskfdiaa 283
Cdd:PRK07487 235 AAMAAPDPRDP------WWVPAPLEGPPRPKRVALcVRPDGLDVDPEVEAALRDAARRLEDAG----------------- 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 284 yYIIATAEASANLSRydGVRYGKR---SENIQNLKEMyvntrSEGFGEEVKRRILLGTFVLSSGYYDAYYIKAQKARAFI 360
Cdd:PRK07487 292 -WTVEEVDDTPPLRE--AAELQERlwlGDGYEALLAA-----AEAEGDPGALAALRGQRAKARPLDLAGYMNALARRATL 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 361 KAKYEEILQDCDLIFMPVTPTTAFKFDT-QKSP--MQTYLE-DVYTISVNLAGLGGISVPVAKdKEGLNISAQLICKAYD 436
Cdd:PRK07487 364 TRQWQLFFEDYPLLLMPVSAELPFPDDLdRQGAegFRRVWEaQLPQIALPFMGLPGLSVPTGL-VGGVPVGVQLVAGRFR 442
|
410
....*....|..
gi 488942809 437 EQTLLDGALSLE 448
Cdd:PRK07487 443 EDLCLAAGEAIE 454
|
|
| PRK11910 |
PRK11910 |
amidase; Provisional |
34-264 |
8.35e-20 |
|
amidase; Provisional
Pssm-ID: 183377 [Multi-domain] Cd Length: 615 Bit Score: 92.01 E-value: 8.35e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 34 AYIEQfLDKDLSVSGE---GVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGSST 110
Cdd:PRK11910 214 AEAEQ-LDKENTTNKSalyGMPVLLKDNIGTKELPTSAGTVALKDWVIGKDATIVENLKANGALILGKTNMSEWAAGMDE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 111 A-----SSCYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSS 185
Cdd:PRK11910 293 DlpngySGKKGQSKNPYSSNLDPSGSSSGSATAATSDFAAIAIGTETNGSIITPASAQSAVGYKPSQGLVNNKGIIPLSS 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 186 SLDQIGVLTQNVEDAAILYDAIagydkMDSTSaniefiKTVPNLNANKKLKIAVIenyvNDADSEVKNALLKTI--DMLK 263
Cdd:PRK11910 373 RFDTPGPLTRTVNDAYLTTNAL-----TNTTS------NPPLSTDALKGKRIGLL----ADGESNEETAVIKKIklDLQK 437
|
.
gi 488942809 264 A 264
Cdd:PRK11910 438 A 438
|
|
| PRK08310 |
PRK08310 |
amidase; Provisional |
32-444 |
6.25e-19 |
|
amidase; Provisional
Pssm-ID: 181375 [Multi-domain] Cd Length: 395 Bit Score: 88.12 E-value: 6.25e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 32 LGAYIeqfLDKDLSVSG------EGVPVAIKDNISVKG---------WELTSAskilqgyIAPYDASAIVNLKANGFSPF 96
Cdd:PRK08310 7 FNAFI---AKPDKPLPHaasgplAGLRFAVKDVFDVAGyvtgcgnpdWLAESP-------VATRTAPAVEKLLAAGARFV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 97 GRCNMDEFAMGSSTASSCYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVS 176
Cdd:PRK08310 77 GKTQTDELAFSLNGQNAHYGTPVNPAAPDRVPGGSSSGSAAAVAGGLADFALGTDTGGSVRAPASFCGLYGLRPTHGRIS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 177 RYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTsaniefiktvpnlnANKKLKIAVIENYVndADSEVKNALL 256
Cdd:PRK08310 157 LEGVMPLAPSFDTVGWFARDIALLERVGEVLLGDDAQEFP--------------LTQRLLIPVDLFAL--LDPAVRAALE 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 257 KTIDMLKANgheivyknlldskFDIAAYYIIATAEASAnlsRYDGVRYGKRSENIQNLKEMYVNTRSEgFGEEVKRRill 336
Cdd:PRK08310 221 AALARLRPH-------------LGPAKPASVPPLSLDE---WYEAFRVLQAAEAWETHGAWISSGNPQ-LGPGVADR--- 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 337 gtFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDtqkSPMQTyLEDVYTISVNL---AGLGG- 412
Cdd:PRK08310 281 --FAAGAEVTADQVEAARARRAAFARELAALLGPDAVLLLPTVPGAAPLRG---APFEA-LEAYRERALRLlciAGLAGl 354
|
410 420 430
....*....|....*....|....*....|....*
gi 488942809 413 --ISVPVAKdKEGLNISAQLI-CKAYDEQtLLDGA 444
Cdd:PRK08310 355 pqISLPLAS-VDGAPFGLSLIgPRGSDRS-LLALA 387
|
|
| MYSc_Myh10 |
cd14920 |
class II myosin heavy chain 10, motor domain; Myosin motor domain of non-muscle myosin heavy ... |
193-345 |
1.43e-03 |
|
class II myosin heavy chain 10, motor domain; Myosin motor domain of non-muscle myosin heavy chain 10 (also called NMMHCB). Mutations in this gene have been associated with May-Hegglin anomaly and developmental defects in brain and heart. Multiple transcript variants encoding different isoforms have been found for this gene. Class II myosins, also called conventional myosins, are the myosin type responsible for producing actomyosin contraction in metazoan muscle and non-muscle cells. Myosin II contains two heavy chains made up of the head (N-terminal) and tail (C-terminal) domains with a coiled-coil morphology that holds the two heavy chains together. The intermediate neck domain is the region creating the angle between the head and tail. It also contains 4 light chains which bind the heavy chains in the "neck" region between the head and tail. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. Class-II myosins are regulated by phosphorylation of the myosin light chain or by binding of Ca2+. A cyclical interaction between myosin and actin provides the driving force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. CyMoBase classifications were used to confirm and identify the myosins in this hierarchy.
Pssm-ID: 276952 [Multi-domain] Cd Length: 673 Bit Score: 41.15 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 193 LTQNVEDAAILYDAIAGYDKMDSTSANIEFIKTVPNLNANKKLkiavienyvNDADSEVKNALLKTIDMLKANGHEIVYK 272
Cdd:cd14920 67 MLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSHKGRKD---------HNIPGELERQLLQANPILESFGNAKTVK 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 273 NLLDSKF--------DIAAYYIIATAEASAnLSRYDGVRYGKRSENIQNLKEMYVntrseGFGEEVKRRILLGTF----V 340
Cdd:cd14920 138 NDNSSRFgkfirinfDVTGYIVGANIETYL-LEKSRAVRQAKDERTFHIFYQLLS-----GAGEHLKSDLLLEGFnnyrF 211
|
....*
gi 488942809 341 LSSGY 345
Cdd:cd14920 212 LSNGY 216
|
|
| PRK06565 |
PRK06565 |
amidase; Validated |
49-179 |
2.08e-03 |
|
amidase; Validated
Pssm-ID: 180626 Cd Length: 566 Bit Score: 40.52 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488942809 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGsSTASSCYGKTLNPLN--FER 126
Cdd:PRK06565 77 DGIPYTAKDSYLVKGLTAASGSPAFKDLVAQRDAFTIERLRAAGAICLGKTNMPPMANG-GMQRGVYGRAESPYNaaYLT 155
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 488942809 127 VPGGSSGGSAAAVAGGLALAS--LGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYG 179
Cdd:PRK06565 156 APFASGSSNGAGTATAASFSAfgLAEETWSSGRGPASNNGLCAYTPSRGVISVRG 210
|
|
| |
