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Conserved domains on  [gi|489303831|ref|WP_003211281|]
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MULTISPECIES: stage V sporulation protein SpoVS [Bacillaceae]

Protein Classification

stage V sporulation protein S( domain architecture ID 10789390)

stage V sporulation protein S interferes with sporulation at an early stage, and may play a positive role in allowing cells to progress beyond stage V of sporulation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SpoVS COG2359
Stage V sporulation protein SpoVS, predicted DNA-binding, AlbA superfamily [Function unknown];
1-86 7.04e-50

Stage V sporulation protein SpoVS, predicted DNA-binding, AlbA superfamily [Function unknown];


:

Pssm-ID: 441926  Cd Length: 88  Bit Score: 151.91  E-value: 7.04e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489303831  1 MEILKVSAKSNPNSVAGALAGVLRERGAAEIQAIGAGALNQAVKAVAIARGFVAPSGVDLICIPAFTDILIDGEERTAIK 80
Cdd:COG2359   1 MEVLKVSSKSNPNSVAGAIAGVLREDGEVEIQAIGAGAVNQAVKAIAIARGYLAPEGIDLVCVPAFVDVEIDGEERTAIR 80


                ....*.
gi 489303831 81 LIVEPR 86
Cdd:COG2359  81 FIVEPR 86
 
Name Accession Description Interval E-value
SpoVS COG2359
Stage V sporulation protein SpoVS, predicted DNA-binding, AlbA superfamily [Function unknown];
1-86 7.04e-50

Stage V sporulation protein SpoVS, predicted DNA-binding, AlbA superfamily [Function unknown];


Pssm-ID: 441926  Cd Length: 88  Bit Score: 151.91  E-value: 7.04e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489303831  1 MEILKVSAKSNPNSVAGALAGVLRERGAAEIQAIGAGALNQAVKAVAIARGFVAPSGVDLICIPAFTDILIDGEERTAIK 80
Cdd:COG2359   1 MEVLKVSSKSNPNSVAGAIAGVLREDGEVEIQAIGAGAVNQAVKAIAIARGYLAPEGIDLVCVPAFVDVEIDGEERTAIR 80


                ....*.
gi 489303831 81 LIVEPR 86
Cdd:COG2359  81 FIVEPR 86
SpoVS pfam04232
Stage V sporulation protein S (SpoVS); In Bacillus subtilis this protein interferes with ...
 3-83 1.19e-42

Stage V sporulation protein S (SpoVS); In Bacillus subtilis this protein interferes with sporulation at an early stage and this inhibitory effect is overcome by SpoIIB and SpoVG. SpoVS seems to play a positive role in allowing progression beyond stage V of sporulation. Null mutations in the spoVS gene block sporulation at stage V, impairing the development of heat resistance and coat assembly.


Pssm-ID: 427805  Cd Length: 81  Bit Score: 133.07  E-value: 1.19e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489303831   3 ILKVSAKSNPNSVAGALAGVLRERGAAEIQAIGAGALNQAVKAVAIARGFVAPSGVDLICIPAFTDILIDGEERTAIKLI 82
Cdd:pfam04232  1 VLKVSSKSNPNAVAGAIAGVLREGGKVELQAIGAGAVNQAVKAIAIARGYLAPDGIDLVCVPAFVEVEIDGEERTAIKFI 80


                 .
gi 489303831  83 V 83
Cdd:pfam04232 81 V 81
 
Name Accession Description Interval E-value
SpoVS COG2359
Stage V sporulation protein SpoVS, predicted DNA-binding, AlbA superfamily [Function unknown];
1-86 7.04e-50

Stage V sporulation protein SpoVS, predicted DNA-binding, AlbA superfamily [Function unknown];


Pssm-ID: 441926  Cd Length: 88  Bit Score: 151.91  E-value: 7.04e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489303831  1 MEILKVSAKSNPNSVAGALAGVLRERGAAEIQAIGAGALNQAVKAVAIARGFVAPSGVDLICIPAFTDILIDGEERTAIK 80
Cdd:COG2359   1 MEVLKVSSKSNPNSVAGAIAGVLREDGEVEIQAIGAGAVNQAVKAIAIARGYLAPEGIDLVCVPAFVDVEIDGEERTAIR 80


                ....*.
gi 489303831 81 LIVEPR 86
Cdd:COG2359  81 FIVEPR 86
SpoVS pfam04232
Stage V sporulation protein S (SpoVS); In Bacillus subtilis this protein interferes with ...
 3-83 1.19e-42

Stage V sporulation protein S (SpoVS); In Bacillus subtilis this protein interferes with sporulation at an early stage and this inhibitory effect is overcome by SpoIIB and SpoVG. SpoVS seems to play a positive role in allowing progression beyond stage V of sporulation. Null mutations in the spoVS gene block sporulation at stage V, impairing the development of heat resistance and coat assembly.


Pssm-ID: 427805  Cd Length: 81  Bit Score: 133.07  E-value: 1.19e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489303831   3 ILKVSAKSNPNSVAGALAGVLRERGAAEIQAIGAGALNQAVKAVAIARGFVAPSGVDLICIPAFTDILIDGEERTAIKLI 82
Cdd:pfam04232  1 VLKVSSKSNPNAVAGAIAGVLREGGKVELQAIGAGAVNQAVKAIAIARGYLAPDGIDLVCVPAFVEVEIDGEERTAIKFI 80


                 .
gi 489303831  83 V 83
Cdd:pfam04232 81 V 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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