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Conserved domains on  [gi|489323968|ref|WP_003231280|]
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MULTISPECIES: DUF420 domain-containing protein [Bacillus]

Protein Classification

DUF420 domain-containing protein( domain architecture ID 10006343)

DUF420 domain-containing protein similar to Bacillus subtilis YozB

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YozB COG2322
Predicted membrane metallochaperone YozB (3H, Sco1 fusion), DUF420 family [General function ...
7-178 5.02e-72

Predicted membrane metallochaperone YozB (3H, Sco1 fusion), DUF420 family [General function prediction only];


:

Pssm-ID: 441896  Cd Length: 177  Bit Score: 214.76  E-value: 5.02e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489323968   7 KPKNYTGIVLTLTVLINGLIAVLFFMPKLDqFSHANIHILPMLNAIFNSFTFIFLLAALIMIKQKNIKAHKRFILAAFTT 86
Cdd:COG2322    5 ARKRYNALIAVLSIVIPALVAGLFGGPPPD-LPGADLSFLPHINAVLNGLTAVLLLAGWRAIKRGNIEAHRRAMLTAFVL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489323968  87 TLLFLICYVTYHSIAENTLYGGEGIMRPIYFFILITHICLSAIIVPLALFTLIRGFSMQVERHKKIARWTMPLWLYVSLT 166
Cdd:COG2322   84 SALFLVSYLLYHALGGSTSFGGPGAIRYVYLFILITHILLAIVVVPLVLYTLYLALTGRFTRHRKIARWTFPIWLYVSVT 163
                        170
                 ....*....|..
gi 489323968 167 GVIVYLMISPYY 178
Cdd:COG2322  164 GVVVYLMLYPYY 175
 
Name Accession Description Interval E-value
YozB COG2322
Predicted membrane metallochaperone YozB (3H, Sco1 fusion), DUF420 family [General function ...
7-178 5.02e-72

Predicted membrane metallochaperone YozB (3H, Sco1 fusion), DUF420 family [General function prediction only];


Pssm-ID: 441896  Cd Length: 177  Bit Score: 214.76  E-value: 5.02e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489323968   7 KPKNYTGIVLTLTVLINGLIAVLFFMPKLDqFSHANIHILPMLNAIFNSFTFIFLLAALIMIKQKNIKAHKRFILAAFTT 86
Cdd:COG2322    5 ARKRYNALIAVLSIVIPALVAGLFGGPPPD-LPGADLSFLPHINAVLNGLTAVLLLAGWRAIKRGNIEAHRRAMLTAFVL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489323968  87 TLLFLICYVTYHSIAENTLYGGEGIMRPIYFFILITHICLSAIIVPLALFTLIRGFSMQVERHKKIARWTMPLWLYVSLT 166
Cdd:COG2322   84 SALFLVSYLLYHALGGSTSFGGPGAIRYVYLFILITHILLAIVVVPLVLYTLYLALTGRFTRHRKIARWTFPIWLYVSVT 163
                        170
                 ....*....|..
gi 489323968 167 GVIVYLMISPYY 178
Cdd:COG2322  164 GVVVYLMLYPYY 175
DUF420 pfam04238
Protein of unknown function (DUF420); Predicted membrane protein with four transmembrane ...
46-174 5.75e-54

Protein of unknown function (DUF420); Predicted membrane protein with four transmembrane helices.


Pssm-ID: 427809  Cd Length: 130  Bit Score: 167.30  E-value: 5.75e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489323968   46 LPMLNAIFNSFTFIFLLAALIMIKQKNIKAHKRFILAAFTTTLLFLICYVTYHSIAENTLYGG-EGIMRPIYFFILITHI 124
Cdd:pfam04238   1 LPHLNAVINAIAAVLLLAGWYAIKRGNIELHRKLMLAAFVLSALFLVSYLAYHALGGSTSFGGpDGEIRYVYLFILITHI 80
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 489323968  125 CLSAIIVPLALFTLIRGFSMQVERHKKIARWTMPLWLYVSLTGVIVYLMI 174
Cdd:pfam04238  81 LLAIVAVPLVLYTLYLALTGRFTRHRKIGRWTFPIWLYVSVTGVVVYLML 130
 
Name Accession Description Interval E-value
YozB COG2322
Predicted membrane metallochaperone YozB (3H, Sco1 fusion), DUF420 family [General function ...
7-178 5.02e-72

Predicted membrane metallochaperone YozB (3H, Sco1 fusion), DUF420 family [General function prediction only];


Pssm-ID: 441896  Cd Length: 177  Bit Score: 214.76  E-value: 5.02e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489323968   7 KPKNYTGIVLTLTVLINGLIAVLFFMPKLDqFSHANIHILPMLNAIFNSFTFIFLLAALIMIKQKNIKAHKRFILAAFTT 86
Cdd:COG2322    5 ARKRYNALIAVLSIVIPALVAGLFGGPPPD-LPGADLSFLPHINAVLNGLTAVLLLAGWRAIKRGNIEAHRRAMLTAFVL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489323968  87 TLLFLICYVTYHSIAENTLYGGEGIMRPIYFFILITHICLSAIIVPLALFTLIRGFSMQVERHKKIARWTMPLWLYVSLT 166
Cdd:COG2322   84 SALFLVSYLLYHALGGSTSFGGPGAIRYVYLFILITHILLAIVVVPLVLYTLYLALTGRFTRHRKIARWTFPIWLYVSVT 163
                        170
                 ....*....|..
gi 489323968 167 GVIVYLMISPYY 178
Cdd:COG2322  164 GVVVYLMLYPYY 175
DUF420 pfam04238
Protein of unknown function (DUF420); Predicted membrane protein with four transmembrane ...
46-174 5.75e-54

Protein of unknown function (DUF420); Predicted membrane protein with four transmembrane helices.


Pssm-ID: 427809  Cd Length: 130  Bit Score: 167.30  E-value: 5.75e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489323968   46 LPMLNAIFNSFTFIFLLAALIMIKQKNIKAHKRFILAAFTTTLLFLICYVTYHSIAENTLYGG-EGIMRPIYFFILITHI 124
Cdd:pfam04238   1 LPHLNAVINAIAAVLLLAGWYAIKRGNIELHRKLMLAAFVLSALFLVSYLAYHALGGSTSFGGpDGEIRYVYLFILITHI 80
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 489323968  125 CLSAIIVPLALFTLIRGFSMQVERHKKIARWTMPLWLYVSLTGVIVYLMI 174
Cdd:pfam04238  81 LLAIVAVPLVLYTLYLALTGRFTRHRKIGRWTFPIWLYVSVTGVVVYLML 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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