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Conserved domains on  [gi|489615599|ref|WP_003520040|]
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MULTISPECIES: DUF1150 family protein [Rhizobium/Agrobacterium group]

Protein Classification

COG5568 family protein( domain architecture ID 10009444)

COG5568 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5568 COG5568
Uncharacterized conserved protein, DUF1150 family [Function unknown];
4-85 2.80e-38

Uncharacterized conserved protein, DUF1150 family [Function unknown];


:

Pssm-ID: 444310  Cd Length: 84  Bit Score: 122.28  E-value: 2.80e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489615599  4 KEAHARLTQSQLAHIGEGEVGYIRKIRAEDVSRCFPEAPDLDPQLDLWALFGADGTPILLTDNRSSTFFKAAEDDLQTVS 83
Cdd:COG5568   3 TEPLRPLTPEDFAALGGGEIVYVRPVRSEDLPRLFPQAPEIPPGLTLYALHSADGTPLALVDDREAAFANARENDLAPVS 82


                ..
gi 489615599 84 LH 85
Cdd:COG5568  83 VH 84
 
Name Accession Description Interval E-value
COG5568 COG5568
Uncharacterized conserved protein, DUF1150 family [Function unknown];
4-85 2.80e-38

Uncharacterized conserved protein, DUF1150 family [Function unknown];


Pssm-ID: 444310  Cd Length: 84  Bit Score: 122.28  E-value: 2.80e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489615599  4 KEAHARLTQSQLAHIGEGEVGYIRKIRAEDVSRCFPEAPDLDPQLDLWALFGADGTPILLTDNRSSTFFKAAEDDLQTVS 83
Cdd:COG5568   3 TEPLRPLTPEDFAALGGGEIVYVRPVRSEDLPRLFPQAPEIPPGLTLYALHSADGTPLALVDDREAAFANARENDLAPVS 82


                ..
gi 489615599 84 LH 85
Cdd:COG5568  83 VH 84
DUF1150 pfam06620
Protein of unknown function (DUF1150); This family consists of several hypothetical bacterial ...
 15-85 1.03e-33

Protein of unknown function (DUF1150); This family consists of several hypothetical bacterial proteins of unknown function.


Pssm-ID: 429037  Cd Length: 71  Bit Score: 110.41  E-value: 1.03e-33
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489615599  15 LAHIGEGEVGYIRKIRAEDVSRCFPEAPDLDPQLDLWALFGADGTPILLTDNRSSTFFKAAEDDLQTVSLH 85
Cdd:pfam06620  1 FAALGGGEIAYVRPIRSDELPREFPQAPQLPPGLTLYALHAADGEPIALTDDRDAAFANARQNELQPVSVH 71
 
Name Accession Description Interval E-value
COG5568 COG5568
Uncharacterized conserved protein, DUF1150 family [Function unknown];
4-85 2.80e-38

Uncharacterized conserved protein, DUF1150 family [Function unknown];


Pssm-ID: 444310  Cd Length: 84  Bit Score: 122.28  E-value: 2.80e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489615599  4 KEAHARLTQSQLAHIGEGEVGYIRKIRAEDVSRCFPEAPDLDPQLDLWALFGADGTPILLTDNRSSTFFKAAEDDLQTVS 83
Cdd:COG5568   3 TEPLRPLTPEDFAALGGGEIVYVRPVRSEDLPRLFPQAPEIPPGLTLYALHSADGTPLALVDDREAAFANARENDLAPVS 82


                ..
gi 489615599 84 LH 85
Cdd:COG5568  83 VH 84
DUF1150 pfam06620
Protein of unknown function (DUF1150); This family consists of several hypothetical bacterial ...
 15-85 1.03e-33

Protein of unknown function (DUF1150); This family consists of several hypothetical bacterial proteins of unknown function.


Pssm-ID: 429037  Cd Length: 71  Bit Score: 110.41  E-value: 1.03e-33
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489615599  15 LAHIGEGEVGYIRKIRAEDVSRCFPEAPDLDPQLDLWALFGADGTPILLTDNRSSTFFKAAEDDLQTVSLH 85
Cdd:pfam06620  1 FAALGGGEIAYVRPIRSDELPREFPQAPQLPPGLTLYALHAADGEPIALTDDRDAAFANARQNELQPVSVH 71
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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