|
Name |
Accession |
Description |
Interval |
E-value |
| PRK07308 |
PRK07308 |
flavodoxin; Validated |
1-148 |
5.26e-60 |
|
flavodoxin; Validated
Pssm-ID: 180922 [Multi-domain] Cd Length: 146 Bit Score: 182.30 E-value: 5.26e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 1 MASARIVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQALASDFEDVDICVTATYTYsdvGDGELPDEAVDFYEELQE 80
Cdd:PRK07308 1 MALAKIVYASMTGNTEEIADIVADKLRELGHDVDVDECTTVDASDFEDADIAIVATYTY---GDGELPDEIVDFYEDLAD 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489660195 81 LDLKGKVYGCCGSGDRFYDDFATSVDDFDKAFAKTGATKGAEDVKIDLAPEEDDIKHLEAFTKQLVEK 148
Cdd:PRK07308 78 LDLSGKIYGVVGSGDTFYDYFCKSVDDFEAQFALTGATKGAESVKVDLAAEDEDIERLEAFAEELAAK 145
|
|
| flav_short |
TIGR01753 |
flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin ... |
6-146 |
8.80e-34 |
|
flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They can act in nitrogen fixation by nitrogenase, in sulfite reduction, and light-dependent NADP+ reduction in during photosynthesis, among other roles. This model describes the short chain type. Many of these are involved in sulfite reduction. [Energy metabolism, Electron transport]
Pssm-ID: 273789 [Multi-domain] Cd Length: 140 Bit Score: 115.51 E-value: 8.80e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 6 IVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQALASDFEDVDICVTATYTYsdvGDGELP-DEAVDFYEELQELDLK 84
Cdd:TIGR01753 3 IVYASMTGNTEEMANIIAEGLKEAGAEVDLLEVADADAEDLLSYDAVLLGCSTW---GDEDLEqDDFEPFFEELEDIDLG 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489660195 85 GKVYGCCGSGDRFYdDFATSVDDFDKAFAKTGATKGAEDVKIDLAPEEDDIKHLEAFTKQLV 146
Cdd:TIGR01753 80 GKKVALFGSGDWGY-EFCEAVDDWEERLKEAGATIIAEGLKVDGDPEEEDLDKCREFAKDLA 140
|
|
| FldA |
COG0716 |
Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: ... |
6-145 |
5.36e-27 |
|
Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440480 [Multi-domain] Cd Length: 135 Bit Score: 98.05 E-value: 5.36e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 6 IVYASLTGNNEDIAGIIEEAFEDLGVDVttTEVSQALASDFEDVDICVTATYTYsdvgDGELPDEAVDFYEELQElDLKG 85
Cdd:COG0716 3 IVYGSTTGNTEKVAEAIAEALGAAGVDL--FEIEDADLDDLEDYDLLILGTPTW----AGELPDDWEDFLEELKE-DLSG 75
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489660195 86 KVYGCCGSGDRFydDFATSVDDFDKAFAKTGAT-KGAEDVKIDLAPE-EDDIKHLEAFTKQL 145
Cdd:COG0716 76 KKVALFGTGDSS--GYGDALGELKELLEEKGAKvVGGYDFEGSKAPDaEDTEERAEEWLKQL 135
|
|
| Flavodoxin_1 |
pfam00258 |
Flavodoxin; |
6-136 |
1.11e-15 |
|
Flavodoxin;
Pssm-ID: 425562 [Multi-domain] Cd Length: 142 Bit Score: 69.32 E-value: 1.11e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 6 IVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQA--LASDFEDVDICVTATYTYsdvGDGELPDEAVDFYEELQ---- 79
Cdd:pfam00258 1 IFYGSQTGNTEKLAEAIAEGLGEAGFEVDVVDLDDVdeTLSEIEEEDLLLVVVSTW---GEGEPPDNAKPFVDWLLlfgt 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 489660195 80 --ELDLKGKVYGCCGSGDRFYDDFATSVDDFDKAFAKTGATKGAEDVKIDLAPEEDDIK 136
Cdd:pfam00258 78 leDGDLSGLKYAVFGLGDSGYEGFCGAAKKLDEKLSELGASRVGPLGEGDEDPQEDGLE 136
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK07308 |
PRK07308 |
flavodoxin; Validated |
1-148 |
5.26e-60 |
|
flavodoxin; Validated
Pssm-ID: 180922 [Multi-domain] Cd Length: 146 Bit Score: 182.30 E-value: 5.26e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 1 MASARIVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQALASDFEDVDICVTATYTYsdvGDGELPDEAVDFYEELQE 80
Cdd:PRK07308 1 MALAKIVYASMTGNTEEIADIVADKLRELGHDVDVDECTTVDASDFEDADIAIVATYTY---GDGELPDEIVDFYEDLAD 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489660195 81 LDLKGKVYGCCGSGDRFYDDFATSVDDFDKAFAKTGATKGAEDVKIDLAPEEDDIKHLEAFTKQLVEK 148
Cdd:PRK07308 78 LDLSGKIYGVVGSGDTFYDYFCKSVDDFEAQFALTGATKGAESVKVDLAAEDEDIERLEAFAEELAAK 145
|
|
| flav_short |
TIGR01753 |
flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin ... |
6-146 |
8.80e-34 |
|
flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They can act in nitrogen fixation by nitrogenase, in sulfite reduction, and light-dependent NADP+ reduction in during photosynthesis, among other roles. This model describes the short chain type. Many of these are involved in sulfite reduction. [Energy metabolism, Electron transport]
Pssm-ID: 273789 [Multi-domain] Cd Length: 140 Bit Score: 115.51 E-value: 8.80e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 6 IVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQALASDFEDVDICVTATYTYsdvGDGELP-DEAVDFYEELQELDLK 84
Cdd:TIGR01753 3 IVYASMTGNTEEMANIIAEGLKEAGAEVDLLEVADADAEDLLSYDAVLLGCSTW---GDEDLEqDDFEPFFEELEDIDLG 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489660195 85 GKVYGCCGSGDRFYdDFATSVDDFDKAFAKTGATKGAEDVKIDLAPEEDDIKHLEAFTKQLV 146
Cdd:TIGR01753 80 GKKVALFGSGDWGY-EFCEAVDDWEERLKEAGATIIAEGLKVDGDPEEEDLDKCREFAKDLA 140
|
|
| PRK06703 |
PRK06703 |
flavodoxin; Provisional |
1-134 |
2.39e-33 |
|
flavodoxin; Provisional
Pssm-ID: 235854 [Multi-domain] Cd Length: 151 Bit Score: 114.86 E-value: 2.39e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 1 MASARIVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQALASDFEDVDICVTATYTYsdvGDGELPDEAVDFYEELQE 80
Cdd:PRK06703 1 MAKILIAYASMSGNTEDIADLIKVSLDAFDHEVVLQEMDGMDAEELLAYDGIILGSYTW---GDGDLPYEAEDFHEDLEN 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 489660195 81 LDLKGKVYGCCGSGDRFYDDFATSVDDFDKAFAKTGATKGAEDVKIDLAPEEDD 134
Cdd:PRK06703 78 IDLSGKKVAVFGSGDTAYPLFCEAVTIFEERLVERGAELVQEGLKIELAPETDE 131
|
|
| FldA |
COG0716 |
Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: ... |
6-145 |
5.36e-27 |
|
Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440480 [Multi-domain] Cd Length: 135 Bit Score: 98.05 E-value: 5.36e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 6 IVYASLTGNNEDIAGIIEEAFEDLGVDVttTEVSQALASDFEDVDICVTATYTYsdvgDGELPDEAVDFYEELQElDLKG 85
Cdd:COG0716 3 IVYGSTTGNTEKVAEAIAEALGAAGVDL--FEIEDADLDDLEDYDLLILGTPTW----AGELPDDWEDFLEELKE-DLSG 75
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489660195 86 KVYGCCGSGDRFydDFATSVDDFDKAFAKTGAT-KGAEDVKIDLAPE-EDDIKHLEAFTKQL 145
Cdd:COG0716 76 KKVALFGTGDSS--GYGDALGELKELLEEKGAKvVGGYDFEGSKAPDaEDTEERAEEWLKQL 135
|
|
| PRK06756 |
PRK06756 |
flavodoxin; Provisional |
1-147 |
3.16e-20 |
|
flavodoxin; Provisional
Pssm-ID: 168663 [Multi-domain] Cd Length: 148 Bit Score: 81.08 E-value: 3.16e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 1 MASARIVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQAL-ASDFEDVDICVTATYTYsdvGDGELPDEAVDFYEELQ 79
Cdd:PRK06756 1 MSKLVMIFASMSGNTEEMADHIAGVIRETENEIEVIDIMDSPeASILEQYDGIILGAYTW---GDGDLPDDFLDFYDAMD 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489660195 80 ELDLKGKVYGCCGSGDRFYDDFATSVDDFDKAFAKTGATKGAEDVKIDLAPEEDDIKHLEAFTKQLVE 147
Cdd:PRK06756 78 SIDLTGKKAAVFGSCDSAYPKYGVAVDILIEKLQERGAAVVLEGLKVELTPEDEDVEKCLQFGAEFVK 145
|
|
| Flavodoxin_1 |
pfam00258 |
Flavodoxin; |
6-136 |
1.11e-15 |
|
Flavodoxin;
Pssm-ID: 425562 [Multi-domain] Cd Length: 142 Bit Score: 69.32 E-value: 1.11e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 6 IVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQA--LASDFEDVDICVTATYTYsdvGDGELPDEAVDFYEELQ---- 79
Cdd:pfam00258 1 IFYGSQTGNTEKLAEAIAEGLGEAGFEVDVVDLDDVdeTLSEIEEEDLLLVVVSTW---GEGEPPDNAKPFVDWLLlfgt 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 489660195 80 --ELDLKGKVYGCCGSGDRFYDDFATSVDDFDKAFAKTGATKGAEDVKIDLAPEEDDIK 136
Cdd:pfam00258 78 leDGDLSGLKYAVFGLGDSGYEGFCGAAKKLDEKLSELGASRVGPLGEGDEDPQEDGLE 136
|
|
| CysJ |
COG0369 |
Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases ... |
6-118 |
1.95e-15 |
|
Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases [Nucleotide transport and metabolism, Inorganic ion transport and metabolism]; Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases is part of the Pathway/BioSystem: Cysteine biosynthesis
Pssm-ID: 440138 [Multi-domain] Cd Length: 561 Bit Score: 72.10 E-value: 1.95e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 6 IVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQALASDFEDVD--ICVTATYtysdvGDGELPDEAVDFYEELQEL-- 81
Cdd:COG0369 31 ILYGSQTGNAEGLAEQLAERAKAAGLAVTLASLDDYKPKDLAKEGllLIVTSTY-----GEGEPPDNARAFYEFLHSKka 105
|
90 100 110
....*....|....*....|....*....|....*...
gi 489660195 82 -DLKGKVYGCCGSGDRFYDDFATSVDDFDKAFAKTGAT 118
Cdd:COG0369 106 pKLDGLRYAVLGLGDSSYETFCQTGKDFDARLEELGAT 143
|
|
| PRK09267 |
PRK09267 |
flavodoxin FldA; Validated |
1-118 |
7.01e-15 |
|
flavodoxin FldA; Validated
Pssm-ID: 236439 [Multi-domain] Cd Length: 169 Bit Score: 67.55 E-value: 7.01e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 1 MASARIVYASLTGNNEDIAGIIEEAFEDLGVDVTttEVSQALASDFEDVD--ICVTATYtysdvGDGELPDEAVDFYEEL 78
Cdd:PRK09267 1 MAKIGIFFGSDTGNTEDIAKMIQKKLGKDVADVV--DIAKASKEDFEAYDllILGIPTW-----GYGELQCDWDDFLPEL 73
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 489660195 79 QELDLKGKVYGCCGSGD--RFYDDFATSVDDFDKAFAKTGAT 118
Cdd:PRK09267 74 EEIDFSGKKVALFGLGDqeDYAEYFCDAMGTLYDIVEPRGAT 115
|
|
| PRK09004 |
PRK09004 |
FMN-binding protein MioC; Provisional |
1-145 |
2.07e-10 |
|
FMN-binding protein MioC; Provisional
Pssm-ID: 181608 [Multi-domain] Cd Length: 146 Bit Score: 55.22 E-value: 2.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 1 MASARIVYASLTGNNEDIAGIIEEAFEDLGVDVTTTevsqaLASDFEDVD-----ICVTATYtysdvGDGELPDEAVDFY 75
Cdd:PRK09004 1 MADITLISGSTLGGAEYVADHLAEKLEEAGFSTETL-----HGPLLDDLSasglwLIVTSTH-----GAGDLPDNLQPFF 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489660195 76 EELQE--LDLKGKVYGCCGSGDRFYDDFATSVDDFDKAFAKTGATKGAEDVKIDLA----PEEDDIKHLEAFTKQL 145
Cdd:PRK09004 71 EELQEqkPDLSQVRFAAIGIGSSEYDTFCGAIDKLEQLLKAKGAKQIGETLKIDVLqhpiPEDPAEEWLKSWINLL 146
|
|
| NorV |
COG0426 |
Flavorubredoxin [Energy production and conversion]; |
6-148 |
2.84e-10 |
|
Flavorubredoxin [Energy production and conversion];
Pssm-ID: 440195 [Multi-domain] Cd Length: 390 Bit Score: 57.15 E-value: 2.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 6 IVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQA----LASDFEDVDICVTATYTYSdvgdGELPDEAVDFYEELQEL 81
Cdd:COG0426 251 IVYASMYGNTEKMAEAIAEGLTEEGVKVKLYDLEKTdpseIITEIFDAKGIVIGSPTYN----GGAFPPIADLLGYLKGL 326
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489660195 82 DLKGKVYGCCGSgdrfYDDFATSVDDFDKAFAKTGATKGAEDVKIDLAPEEDDIKHLEAFTKQLVEK 148
Cdd:COG0426 327 APKNKLAGAFGS----YGWSGEAVKLLEEKLEDAGFEVVFEPLRVKFKPTEEDLKKCEELGTDLAQK 389
|
|
| PRK09271 |
PRK09271 |
flavodoxin; Provisional |
6-104 |
1.35e-08 |
|
flavodoxin; Provisional
Pssm-ID: 181744 Cd Length: 160 Bit Score: 50.96 E-value: 1.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 6 IVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVS-QALAS---DFEDVDICVTATYTysdVGDGELPDEAVDFYEELQEL 81
Cdd:PRK09271 5 LAYASLSGNTREVAREIEERCEEAGHEVDWVETDvQTLAEyplDPEDYDLYLLGTWT---DNAGRTPPEMKRFIAELAET 81
|
90 100 110
....*....|....*....|....*....|....*.
gi 489660195 82 DLKGK---VYGC----------CGSGDRFYDDFATS 104
Cdd:PRK09271 82 IGKPPnvaVFGTgetqwgeeyyCGAVHRMARFFGSS 117
|
|
| cysJ |
PRK10953 |
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit; |
6-151 |
5.56e-07 |
|
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;
Pssm-ID: 182862 [Multi-domain] Cd Length: 600 Bit Score: 47.79 E-value: 5.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 6 IVYASLTGNNEDIAgiiEEAFEDL-GVDVTTTEVSqalASDF-------EDVDICVTATYtysdvGDGELPDEAVDFYEE 77
Cdd:PRK10953 66 LISASQTGNARRVA---EQLRDDLlAAKLNVNLVN---AGDYkfkqiaqEKLLIVVTSTQ-----GEGEPPEEAVALHKF 134
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489660195 78 L---QELDLKGKVYGCCGSGDRFYDDFATSVDDFDKAFAKTGATKGAEDVKIDLAPEEDdikhLEAFTKQLVEKYQA 151
Cdd:PRK10953 135 LfskKAPKLENTAFAVFGLGDTSYEFFCQAGKDFDSKLAELGAERLLDRVDADVEYQAA----ASEWRARVVDALKS 207
|
|
| PRK05568 |
PRK05568 |
flavodoxin; Provisional |
1-148 |
4.64e-06 |
|
flavodoxin; Provisional
Pssm-ID: 235508 [Multi-domain] Cd Length: 142 Bit Score: 43.64 E-value: 4.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489660195 1 MASARIVYASLTGNNEDIAGIIEEAFEDLGVDVTTTEVSQALASDFEDVDICVTATytySDVGDGELPDEAVDFYEELQE 80
Cdd:PRK05568 1 MKKINIIYWSGTGNTEAMANLIAEGAKENGAEVKLLNVSEASVDDVKGADVVALGS---PAMGDEVLEEGEMEPFVESIS 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489660195 81 LDLKGKVYGCCGSGDRFYDDFatsVDDFDKAFAKTGATKGAEDVKIDLAPEEDDIKHLEAFTKQLVEK 148
Cdd:PRK05568 78 SLVKGKKLVLFGSYGWGDGEW---MRDWVERMEGYGANLVNEGLIVNNTPEGEGIEKCKALGEALAKA 142
|
|
|