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Conserved domains on  [gi|490028578|ref|WP_003931055|]
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MULTISPECIES: DUF3117 domain-containing protein [Corynebacteriales]

Protein Classification

DUF3117 domain-containing protein( domain architecture ID 10568282)

DUF3117 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3117 pfam11314
Protein of unknown function (DUF3117); This family of proteins with unknown function appears ...
 4-53 5.58e-25

Protein of unknown function (DUF3117); This family of proteins with unknown function appears to be restricted to Actinobacteria.


:

Pssm-ID: 431805  Cd Length: 50  Bit Score: 86.22  E-value: 5.58e-25
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 490028578   4 MKPRTGDGPLEATKEGRGIVMRVPLEGGGRLVVELTPEEAAALGDELKGV 53
Cdd:pfam11314  1 MKPRTGDGPMEVVKEGRGIVMRIPLEGGGRLVVELNDEEAAELGEALKEV 50
 
Name Accession Description Interval E-value
DUF3117 pfam11314
Protein of unknown function (DUF3117); This family of proteins with unknown function appears ...
 4-53 5.58e-25

Protein of unknown function (DUF3117); This family of proteins with unknown function appears to be restricted to Actinobacteria.


Pssm-ID: 431805  Cd Length: 50  Bit Score: 86.22  E-value: 5.58e-25
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 490028578   4 MKPRTGDGPLEATKEGRGIVMRVPLEGGGRLVVELTPEEAAALGDELKGV 53
Cdd:pfam11314  1 MKPRTGDGPMEVVKEGRGIVMRIPLEGGGRLVVELNDEEAAELGEALKEV 50
 
Name Accession Description Interval E-value
DUF3117 pfam11314
Protein of unknown function (DUF3117); This family of proteins with unknown function appears ...
 4-53 5.58e-25

Protein of unknown function (DUF3117); This family of proteins with unknown function appears to be restricted to Actinobacteria.


Pssm-ID: 431805  Cd Length: 50  Bit Score: 86.22  E-value: 5.58e-25
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 490028578   4 MKPRTGDGPLEATKEGRGIVMRVPLEGGGRLVVELTPEEAAALGDELKGV 53
Cdd:pfam11314  1 MKPRTGDGPMEVVKEGRGIVMRIPLEGGGRLVVELNDEEAAELGEALKEV 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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