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Conserved domains on  [gi|494391451|ref|WP_007207616|]
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MULTISPECIES: type Z 30S ribosomal protein S14 [Enterococcaceae]

Protein Classification

30S ribosomal protein S14( domain architecture ID 10012995)

30S ribosomal protein S14 type Z is located in the peptidyl transferase center and involved in assembly of the 30S ribosome subunit

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 1.26e-34

type Z 30S ribosomal protein S14;


:

Pssm-ID: 181216  Cd Length: 61  Bit Score: 111.12  E-value: 1.26e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 494391451  1 MAKKSMIAKNKRPAKHSTQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
 
Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 1.26e-34

type Z 30S ribosomal protein S14;


Pssm-ID: 181216  Cd Length: 61  Bit Score: 111.12  E-value: 1.26e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 494391451  1 MAKKSMIAKNKRPAKHSTQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
RpsN COG0199
Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...
 1-61 7.93e-34

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit


Pssm-ID: 439969  Cd Length: 60  Bit Score: 109.33  E-value: 7.93e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 494391451  1 MAKKSMIAKNKRPAKhSTQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:COG0199   1 MAKKSMIARNKKRPK-PVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 15-60 6.16e-22

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


Pssm-ID: 459734  Cd Length: 54  Bit Score: 78.99  E-value: 6.16e-22
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 494391451  15 KHSTQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKAS 60
Cdd:pfam00253  9 SSPTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
 
Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 1.26e-34

type Z 30S ribosomal protein S14;


Pssm-ID: 181216  Cd Length: 61  Bit Score: 111.12  E-value: 1.26e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 494391451  1 MAKKSMIAKNKRPAKHSTQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
RpsN COG0199
Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...
 1-61 7.93e-34

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit


Pssm-ID: 439969  Cd Length: 60  Bit Score: 109.33  E-value: 7.93e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 494391451  1 MAKKSMIAKNKRPAKhSTQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:COG0199   1 MAKKSMIARNKKRPK-PVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 15-60 6.16e-22

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


Pssm-ID: 459734  Cd Length: 54  Bit Score: 78.99  E-value: 6.16e-22
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 494391451  15 KHSTQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKAS 60
Cdd:pfam00253  9 SSPTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
rpsN PRK08881
30S ribosomal protein S14; Reviewed
 1-61 1.87e-20

30S ribosomal protein S14; Reviewed


Pssm-ID: 181574  Cd Length: 101  Bit Score: 76.73  E-value: 1.87e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494391451   1 MAKKSMIAKNKRPAK----------------------------------------HSTQEYTRCERCGRPHSVYRKFKLC 40
Cdd:PRK08881   1 MAKKSMIAREKKRKKlvakyaakraelkaiisdpnlsdeeryearlklqklprnsSPTRLRNRCELTGRPRGYYRKFGLS 80

                         90       100
                 ....*....|....*....|.
gi 494391451  41 RICFRELAYKGQIPGVKKASW 61
Cdd:PRK08881  81 RIKLRELAHRGEIPGVVKASW 101
rpsN PRK06911
30S ribosomal protein S14; Reviewed
 22-61 9.41e-12

30S ribosomal protein S14; Reviewed


Pssm-ID: 180742 [Multi-domain]  Cd Length: 100  Bit Score: 54.69  E-value: 9.41e-12
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 494391451  22 TRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:PRK06911  61 TRCKQCGRPHAVYRKFNLCRICLRQQLMVGNIPGGRKSSW 100
rps14 CHL00074
ribosomal protein S14
 23-61 3.35e-09

ribosomal protein S14


Pssm-ID: 214354  Cd Length: 100  Bit Score: 47.88  E-value: 3.35e-09
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 494391451  23 RCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:CHL00074  62 RCFLTGRPRGNYRDFGLSRHVLREMAHACLLPGVTKSSW 100
rps14P PRK05766
30S ribosomal protein S14P; Reviewed
 10-50 1.83e-04

30S ribosomal protein S14P; Reviewed


Pssm-ID: 235598  Cd Length: 52  Bit Score: 34.87  E-value: 1.83e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 494391451 10 NKRPAKHSTQEYTRCERCGRPHSVYRKF--KLCRICFRELAYK 50
Cdd:PRK05766  3 KPPKKRKYGKGARECQRCGRKQGLIRKYglYLCRQCFREVAPK 45
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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