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Conserved domains on  [gi|498449220|ref|WP_010754753|]
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MULTISPECIES: type Z 30S ribosomal protein S14 [Enterococcaceae]

Protein Classification

30S ribosomal protein S14( domain architecture ID 10012995)

30S ribosomal protein S14 type Z is located in the peptidyl transferase center and involved in assembly of the 30S ribosome subunit

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 5.73e-35

type Z 30S ribosomal protein S14;


:

Pssm-ID: 181216  Cd Length: 61  Bit Score: 112.27  E-value: 5.73e-35
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 498449220  1 MAKKSMIAKNKRPAKFSSQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
 
Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 5.73e-35

type Z 30S ribosomal protein S14;


Pssm-ID: 181216  Cd Length: 61  Bit Score: 112.27  E-value: 5.73e-35
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 498449220  1 MAKKSMIAKNKRPAKFSSQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
RpsN COG0199
Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...
 1-61 3.81e-33

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit


Pssm-ID: 439969  Cd Length: 60  Bit Score: 107.40  E-value: 3.81e-33
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 498449220  1 MAKKSMIAKNKRPAKfSSQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:COG0199   1 MAKKSMIARNKKRPK-PVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 10-60 4.07e-21

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


Pssm-ID: 459734  Cd Length: 54  Bit Score: 77.06  E-value: 4.07e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 498449220  10 NKRPAKFS-SQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKAS 60
Cdd:pfam00253  3 QKLPRNSSpTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
 
Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 5.73e-35

type Z 30S ribosomal protein S14;


Pssm-ID: 181216  Cd Length: 61  Bit Score: 112.27  E-value: 5.73e-35
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 498449220  1 MAKKSMIAKNKRPAKFSSQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
RpsN COG0199
Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...
 1-61 3.81e-33

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit


Pssm-ID: 439969  Cd Length: 60  Bit Score: 107.40  E-value: 3.81e-33
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 498449220  1 MAKKSMIAKNKRPAKfSSQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:COG0199   1 MAKKSMIARNKKRPK-PVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 10-60 4.07e-21

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


Pssm-ID: 459734  Cd Length: 54  Bit Score: 77.06  E-value: 4.07e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 498449220  10 NKRPAKFS-SQEYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKAS 60
Cdd:pfam00253  3 QKLPRNSSpTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
rpsN PRK08881
30S ribosomal protein S14; Reviewed
 1-61 6.26e-21

30S ribosomal protein S14; Reviewed


Pssm-ID: 181574  Cd Length: 101  Bit Score: 77.88  E-value: 6.26e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498449220   1 MAKKSMIAKNKRPAK---------------FSSQEYT-------------------------RCERCGRPHSVYRKFKLC 40
Cdd:PRK08881   1 MAKKSMIAREKKRKKlvakyaakraelkaiISDPNLSdeeryearlklqklprnssptrlrnRCELTGRPRGYYRKFGLS 80

                         90       100
                 ....*....|....*....|.
gi 498449220  41 RICFRELAYKGQIPGVKKASW 61
Cdd:PRK08881  81 RIKLRELAHRGEIPGVVKASW 101
rpsN PRK06911
30S ribosomal protein S14; Reviewed
 2-61 9.31e-12

30S ribosomal protein S14; Reviewed


Pssm-ID: 180742 [Multi-domain]  Cd Length: 100  Bit Score: 54.69  E-value: 9.31e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 498449220   2 AKKSMIAKNKRPAKFSsqeyTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:PRK06911  45 AKLAKLPVNSNPVRYV----TRCKQCGRPHAVYRKFNLCRICLRQQLMVGNIPGGRKSSW 100
rps14 CHL00074
ribosomal protein S14
 23-61 3.78e-09

ribosomal protein S14


Pssm-ID: 214354  Cd Length: 100  Bit Score: 47.88  E-value: 3.78e-09
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 498449220  23 RCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVKKASW 61
Cdd:CHL00074  62 RCFLTGRPRGNYRDFGLSRHVLREMAHACLLPGVTKSSW 100
rps14P PRK05766
30S ribosomal protein S14P; Reviewed
 23-50 5.11e-04

30S ribosomal protein S14P; Reviewed


Pssm-ID: 235598  Cd Length: 52  Bit Score: 33.71  E-value: 5.11e-04
                        10        20        30
                ....*....|....*....|....*....|
gi 498449220 23 RCERCGRPHSVYRKF--KLCRICFRELAYK 50
Cdd:PRK05766 16 ECQRCGRKQGLIRKYglYLCRQCFREVAPK 45
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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