cobalamin 5'-phosphate synthase/cobalamin synthase; cobS is involved with cobalamin ...
1-225
3.86e-73
cobalamin 5'-phosphate synthase/cobalamin synthase; cobS is involved with cobalamin biosynthesis in part III of colbalmin biosynthesis. The enzyme catyalzes the reactions adenosylcobinamide-GDP + alpha-ribazole-5'-P = adenosylcobalamin-5'-phosphate + GMP and adenosylcobinamide-GDP + alpha-ribazole = adenosylcobalamin + GMP. The protein product is associated with a large complex of proteins and is induced by cobinamide. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
:
Pssm-ID: 213524 Cd Length: 241 Bit Score: 222.32 E-value: 3.86e-73
cobalamin 5'-phosphate synthase/cobalamin synthase; cobS is involved with cobalamin ...
1-225
3.86e-73
cobalamin 5'-phosphate synthase/cobalamin synthase; cobS is involved with cobalamin biosynthesis in part III of colbalmin biosynthesis. The enzyme catyalzes the reactions adenosylcobinamide-GDP + alpha-ribazole-5'-P = adenosylcobalamin-5'-phosphate + GMP and adenosylcobinamide-GDP + alpha-ribazole = adenosylcobalamin + GMP. The protein product is associated with a large complex of proteins and is induced by cobinamide. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213524 Cd Length: 241 Bit Score: 222.32 E-value: 3.86e-73
Cobalamin synthase CobS (adenosylcobinamide-GDP ribazoletransferase) [Coenzyme transport and ...
1-228
1.88e-31
Cobalamin synthase CobS (adenosylcobinamide-GDP ribazoletransferase) [Coenzyme transport and metabolism]; Cobalamin synthase CobS (adenosylcobinamide-GDP ribazoletransferase) is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 440137 Cd Length: 246 Bit Score: 115.25 E-value: 1.88e-31
Cobalamin-5-phosphate synthase; This is family of Colbalmin-5-phosphate synthases, CobS, from ...
8-222
2.61e-19
Cobalamin-5-phosphate synthase; This is family of Colbalmin-5-phosphate synthases, CobS, from bacteria. The CobS enzyme catalyzes the synthesis of AdoCbl-5'-p from AdoCbi-GDP and alpha-ribazole-5'-P. This enzyme is involved in the cobalamin (vitamin B12) biosynthesis pathway in particular the nucleotide loop assembly stage in conjunction with CobC, CobU and CobT.
Pssm-ID: 460640 Cd Length: 215 Bit Score: 82.61 E-value: 2.61e-19
cobalamin 5'-phosphate synthase/cobalamin synthase; cobS is involved with cobalamin ...
1-225
3.86e-73
cobalamin 5'-phosphate synthase/cobalamin synthase; cobS is involved with cobalamin biosynthesis in part III of colbalmin biosynthesis. The enzyme catyalzes the reactions adenosylcobinamide-GDP + alpha-ribazole-5'-P = adenosylcobalamin-5'-phosphate + GMP and adenosylcobinamide-GDP + alpha-ribazole = adenosylcobalamin + GMP. The protein product is associated with a large complex of proteins and is induced by cobinamide. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213524 Cd Length: 241 Bit Score: 222.32 E-value: 3.86e-73
Cobalamin synthase CobS (adenosylcobinamide-GDP ribazoletransferase) [Coenzyme transport and ...
1-228
1.88e-31
Cobalamin synthase CobS (adenosylcobinamide-GDP ribazoletransferase) [Coenzyme transport and metabolism]; Cobalamin synthase CobS (adenosylcobinamide-GDP ribazoletransferase) is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 440137 Cd Length: 246 Bit Score: 115.25 E-value: 1.88e-31
Cobalamin-5-phosphate synthase; This is family of Colbalmin-5-phosphate synthases, CobS, from ...
8-222
2.61e-19
Cobalamin-5-phosphate synthase; This is family of Colbalmin-5-phosphate synthases, CobS, from bacteria. The CobS enzyme catalyzes the synthesis of AdoCbl-5'-p from AdoCbi-GDP and alpha-ribazole-5'-P. This enzyme is involved in the cobalamin (vitamin B12) biosynthesis pathway in particular the nucleotide loop assembly stage in conjunction with CobC, CobU and CobT.
Pssm-ID: 460640 Cd Length: 215 Bit Score: 82.61 E-value: 2.61e-19
Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
References:
Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
of the residues that compose this conserved feature have been mapped to the query sequence.
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Functional characterization of the conserved domain architecture found on the query.
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This image shows a graphical summary of conserved domains identified on the query sequence.
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if a domain or superfamily has been annotated with functional sites (conserved features),
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click on the bars or triangles to view your query sequence embedded in a multiple sequence alignment of the proteins used to develop the corresponding domain model.
The table lists conserved domains identified on the query sequence. Click on the plus sign (+) on the left to display full descriptions, alignments, and scores.
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To view your query sequence embedded in that multiple sequence alignment, click on the colored bars in the Graphical Summary portion of the search results page,
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Concise Display shows only the best scoring domain model, in each hit category listed below except non-specific hits, for each region on the query sequence.
(labeled illustration) Standard Display shows only the best scoring domain model from each source, in each hit category listed below for each region on the query sequence.
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Retrieve proteins that contain one or more of the domains present in the query sequence, using the Conserved Domain Architecture Retrieval Tool
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