NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|499188922|ref|WP_010886462|]
View 

MULTISPECIES: YheE family protein [Bacillus]

Protein Classification

YheE family protein( domain architecture ID 13879457)

YheE family protein is a DUF5342 domain-containing protein; similar to Bacillus subtilis protein YheE

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF5342 pfam17277
Family of unknown function (DUF5342); This family of no known function is found in Bacilli.
 4-72 3.05e-37

Family of unknown function (DUF5342); This family of no known function is found in Bacilli.


:

Pssm-ID: 435833  Cd Length: 69  Bit Score: 118.54  E-value: 3.05e-37
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 499188922   4 MISHFSWKPLFPKEKLPGWKISFYYKGTHYEGIYHKSGEIEWGDLFPARADEPALTNEIHELMLFHIYD 72
Cdd:pfam17277  1 MLSHFQYKPLFENSQLPGWSISFYYKGKRYTGIYHKDGSIEWTSAAPPEEDEEQLEKQIHELMLFHVYE 69
 
Name Accession Description Interval E-value
DUF5342 pfam17277
Family of unknown function (DUF5342); This family of no known function is found in Bacilli.
 4-72 3.05e-37

Family of unknown function (DUF5342); This family of no known function is found in Bacilli.


Pssm-ID: 435833  Cd Length: 69  Bit Score: 118.54  E-value: 3.05e-37
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 499188922   4 MISHFSWKPLFPKEKLPGWKISFYYKGTHYEGIYHKSGEIEWGDLFPARADEPALTNEIHELMLFHIYD 72
Cdd:pfam17277  1 MLSHFQYKPLFENSQLPGWSISFYYKGKRYTGIYHKDGSIEWTSAAPPEEDEEQLEKQIHELMLFHVYE 69
 
Name Accession Description Interval E-value
DUF5342 pfam17277
Family of unknown function (DUF5342); This family of no known function is found in Bacilli.
 4-72 3.05e-37

Family of unknown function (DUF5342); This family of no known function is found in Bacilli.


Pssm-ID: 435833  Cd Length: 69  Bit Score: 118.54  E-value: 3.05e-37
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 499188922   4 MISHFSWKPLFPKEKLPGWKISFYYKGTHYEGIYHKSGEIEWGDLFPARADEPALTNEIHELMLFHIYD 72
Cdd:pfam17277  1 MLSHFQYKPLFENSQLPGWSISFYYKGKRYTGIYHKDGSIEWTSAAPPEEDEEQLEKQIHELMLFHVYE 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH