NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|499817322|ref|WP_011498056|]
View 

flagellar hook-associated protein FlgK [Shewanella denitrificans]

Protein Classification

flagellar hook-associated protein FlgK( domain architecture ID 11441387)

flagellar hook-associated protein FlgK forms the junction between the hook and the filament in the flagellum together with FlgL and provides a structural base where flagellin, a filament-forming protein, is inserted for the initiation of filament elongation

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
FlgK COG1256
Flagellar hook-associated protein FlgK [Cell motility];
1-455 2.59e-113

Flagellar hook-associated protein FlgK [Cell motility];


:

Pssm-ID: 440868 [Multi-domain]  Cd Length: 479  Bit Score: 341.86  E-value: 2.59e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVY---VDGVRRISDQYEVAQLWKTNSD 77
Cdd:COG1256    3 FSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTgvrVTGIRRIRDEFLDAQLRSANSD 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  78 VGFSKIQTSYLGQAEQVFG-ADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQING 156
Cdd:COG1256   83 LGYAEARADALSQLEALLGePSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADADS 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 157 QLGSSVKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGNTKA 236
Cdd:COG1256  163 QIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQDDGTVNVSTGNGQTLVDGDTAS 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 237 TLSTVPDPLNPAN-SNISIQFGKSQFVFENSV-GGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLSGAA 314
Cdd:COG1256  243 ELSFTPSAGDPGGlSTVTLDDSGVPSDATSSItGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNGNP 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 315 PVKNFLSVNSVNP----------AGSLAISSGFT--PEDLALGLD--GTQGDNSNLKALAALASKSLGFTSLGGAvSLGE 380
Cdd:COG1256  323 GGDLFDIDPSITGgtltpfdtvgAGNISVNPAVIgdPSLLAAANSdgGGAGDNTNALALAALQDAKLVFDSGGSG-TLSD 401

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499817322 381 SFSSIVGALGSASRQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:COG1256  402 YYASLVSDLGVDAQQAKTEAEAQEALLDQLENQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLN 476
 
Name Accession Description Interval E-value
FlgK COG1256
Flagellar hook-associated protein FlgK [Cell motility];
1-455 2.59e-113

Flagellar hook-associated protein FlgK [Cell motility];


Pssm-ID: 440868 [Multi-domain]  Cd Length: 479  Bit Score: 341.86  E-value: 2.59e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVY---VDGVRRISDQYEVAQLWKTNSD 77
Cdd:COG1256    3 FSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTgvrVTGIRRIRDEFLDAQLRSANSD 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  78 VGFSKIQTSYLGQAEQVFG-ADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQING 156
Cdd:COG1256   83 LGYAEARADALSQLEALLGePSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADADS 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 157 QLGSSVKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGNTKA 236
Cdd:COG1256  163 QIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQDDGTVNVSTGNGQTLVDGDTAS 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 237 TLSTVPDPLNPAN-SNISIQFGKSQFVFENSV-GGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLSGAA 314
Cdd:COG1256  243 ELSFTPSAGDPGGlSTVTLDDSGVPSDATSSItGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNGNP 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 315 PVKNFLSVNSVNP----------AGSLAISSGFT--PEDLALGLD--GTQGDNSNLKALAALASKSLGFTSLGGAvSLGE 380
Cdd:COG1256  323 GGDLFDIDPSITGgtltpfdtvgAGNISVNPAVIgdPSLLAAANSdgGGAGDNTNALALAALQDAKLVFDSGGSG-TLSD 401

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499817322 381 SFSSIVGALGSASRQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:COG1256  402 YYASLVSDLGVDAQQAKTEAEAQEALLDQLENQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLN 476
flgK PRK07191
flagellar hook-associated protein FlgK; Validated
 1-457 4.08e-100

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180871 [Multi-domain]  Cd Length: 456  Bit Score: 307.13  E-value: 4.08e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVY---VDGVRRISDQYEVAQLWKTNSD 77
Cdd:PRK07191   1 MNFIRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSAIGADGQGGVNAGNgvnVDGIRRLSQQYVVMQEWQANSQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  78 VGFSKIQTSYLGQAEQVFGADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQINGQ 157
Cdd:PRK07191  81 QGYYDAGEQYFNALELVVGNKSTSLATGLNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQKKSIGQQ 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 158 LGSSVKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGNTKAT 237
Cdd:PRK07191 161 RDATVKQINSLTRSIADYNQKILKNRSDGNNISDLLDQRDLQIKKLSGLIEVRVVQQEDGTYRVSVKNGQPLVNGAVAAE 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 238 LSTVPDPLNpaNSNISIQFGKSQFVFENSVGGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLSGaAPVK 317
Cdd:PRK07191 241 LAVDTSSVG--TQKLTLHFSGATQGMNMSCGGQLGGLNDYELTTLKPLQDSTQEMAKTVADKFNDQLTKGFDMNG-APGK 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 318 NFLSVNSVNPAGSLAIsSGFTPEDLALGLDGTQ-GDNSNLKALAALASKSLGFTSLGGaVSLGESFSSIVGALGSASRQA 396
Cdd:PRK07191 318 PLFTFNPSDPNGMLQL-SAIKPEELALSGDPKPpGDNSNLFELLEIRSQKTDLPGMGN-VSLGDAATALVGYIAITSNQN 395

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499817322 397 KADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLNSF 457
Cdd:PRK07191 396 HSELENAENVRNQAERYWESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 456
flgK_ends TIGR02492
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ...
 2-314 6.64e-56

flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274162 [Multi-domain]  Cd Length: 323  Bit Score: 188.32  E-value: 6.64e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322    2 NMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVY---VDGVRRISDQYEVAQLWKTNSDV 78
Cdd:TIGR02492   1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAGGQGGKQIGTgvkVTSIRRIQDQFLDNQYRRANSSA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   79 GFSKIQTSYLGQAEQVFGADGND-ISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQINGQ 157
Cdd:TIGR02492  81 GYADSRASGLSKIEQIFNDLDGSgLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGINAE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  158 LGSSVKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGNTKAT 237
Cdd:TIGR02492 161 IKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVDGATVTG 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  238 LSTVPDPLNPANSNISIQFGKSQFVFE------NSVGGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLS 311
Cdd:TIGR02492 241 SSTSPLTADTTGGKVGGDGVYLPSGSSkvtissDLQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGADLT 320


                  ...
gi 499817322  312 GAA 314
Cdd:TIGR02492 321 GSA 323
Flg_bbr_C pfam06429
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ...
 394-455 3.64e-10

Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.


Pssm-ID: 428939 [Multi-domain]  Cd Length: 74  Bit Score: 55.73  E-value: 3.64e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499817322  394 RQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:pfam06429  12 RETDGAPILGAGADGRVQQGYLEGSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQ 73
 
Name Accession Description Interval E-value
FlgK COG1256
Flagellar hook-associated protein FlgK [Cell motility];
1-455 2.59e-113

Flagellar hook-associated protein FlgK [Cell motility];


Pssm-ID: 440868 [Multi-domain]  Cd Length: 479  Bit Score: 341.86  E-value: 2.59e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVY---VDGVRRISDQYEVAQLWKTNSD 77
Cdd:COG1256    3 FSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTgvrVTGIRRIRDEFLDAQLRSANSD 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  78 VGFSKIQTSYLGQAEQVFG-ADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQING 156
Cdd:COG1256   83 LGYAEARADALSQLEALLGePSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADADS 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 157 QLGSSVKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGNTKA 236
Cdd:COG1256  163 QIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQDDGTVNVSTGNGQTLVDGDTAS 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 237 TLSTVPDPLNPAN-SNISIQFGKSQFVFENSV-GGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLSGAA 314
Cdd:COG1256  243 ELSFTPSAGDPGGlSTVTLDDSGVPSDATSSItGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNGNP 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 315 PVKNFLSVNSVNP----------AGSLAISSGFT--PEDLALGLD--GTQGDNSNLKALAALASKSLGFTSLGGAvSLGE 380
Cdd:COG1256  323 GGDLFDIDPSITGgtltpfdtvgAGNISVNPAVIgdPSLLAAANSdgGGAGDNTNALALAALQDAKLVFDSGGSG-TLSD 401

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499817322 381 SFSSIVGALGSASRQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:COG1256  402 YYASLVSDLGVDAQQAKTEAEAQEALLDQLENQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLN 476
flgK PRK07191
flagellar hook-associated protein FlgK; Validated
 1-457 4.08e-100

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180871 [Multi-domain]  Cd Length: 456  Bit Score: 307.13  E-value: 4.08e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVY---VDGVRRISDQYEVAQLWKTNSD 77
Cdd:PRK07191   1 MNFIRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSAIGADGQGGVNAGNgvnVDGIRRLSQQYVVMQEWQANSQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  78 VGFSKIQTSYLGQAEQVFGADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQINGQ 157
Cdd:PRK07191  81 QGYYDAGEQYFNALELVVGNKSTSLATGLNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQKKSIGQQ 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 158 LGSSVKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGNTKAT 237
Cdd:PRK07191 161 RDATVKQINSLTRSIADYNQKILKNRSDGNNISDLLDQRDLQIKKLSGLIEVRVVQQEDGTYRVSVKNGQPLVNGAVAAE 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 238 LSTVPDPLNpaNSNISIQFGKSQFVFENSVGGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLSGaAPVK 317
Cdd:PRK07191 241 LAVDTSSVG--TQKLTLHFSGATQGMNMSCGGQLGGLNDYELTTLKPLQDSTQEMAKTVADKFNDQLTKGFDMNG-APGK 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 318 NFLSVNSVNPAGSLAIsSGFTPEDLALGLDGTQ-GDNSNLKALAALASKSLGFTSLGGaVSLGESFSSIVGALGSASRQA 396
Cdd:PRK07191 318 PLFTFNPSDPNGMLQL-SAIKPEELALSGDPKPpGDNSNLFELLEIRSQKTDLPGMGN-VSLGDAATALVGYIAITSNQN 395

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499817322 397 KADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLNSF 457
Cdd:PRK07191 396 HSELENAENVRNQAERYWESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 456
flgK_ends TIGR02492
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ...
 2-314 6.64e-56

flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274162 [Multi-domain]  Cd Length: 323  Bit Score: 188.32  E-value: 6.64e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322    2 NMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVY---VDGVRRISDQYEVAQLWKTNSDV 78
Cdd:TIGR02492   1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAGGQGGKQIGTgvkVTSIRRIQDQFLDNQYRRANSSA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   79 GFSKIQTSYLGQAEQVFGADGND-ISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQINGQ 157
Cdd:TIGR02492  81 GYADSRASGLSKIEQIFNDLDGSgLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGINAE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  158 LGSSVKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGNTKAT 237
Cdd:TIGR02492 161 IKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVDGATVTG 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  238 LSTVPDPLNPANSNISIQFGKSQFVFE------NSVGGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLS 311
Cdd:TIGR02492 241 SSTSPLTADTTGGKVGGDGVYLPSGSSkvtissDLQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGADLT 320


                  ...
gi 499817322  312 GAA 314
Cdd:TIGR02492 321 GSA 323
flgK PRK05683
flagellar hook-associated protein FlgK; Validated
 1-324 2.67e-49

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 235558 [Multi-domain]  Cd Length: 676  Bit Score: 178.38  E-value: 2.67e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGG---AGVYVDGVRRISDQYEVAQLWKTNSd 77
Cdd:PRK05683   1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTVQTTKASQQSGAGyigTGTTLADVRRIYNSFLDTQLRTATS- 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  78 vgFSKIQTSYLGQAEQVFG--ADGND-ISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQI 154
Cdd:PRK05683  80 --LNSDASAYLGQISQLDKllSDSTTgISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQQNSNI 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 155 NGQLGSSVKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRVVEDaQGLVNISLEKGEPLIAGNT 234
Cdd:PRK05683 158 NSQLSAMTDQVNNLTTSIASYNKQIAQASASGATPNDLLDARDEAVRQLNELVGVTVVER-DGNYDVYIGSGQPLVVGNT 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 235 KATLSTVPDPLNPANSNISIQFGKSQFVFENSV-GGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLSGA 313
Cdd:PRK05683 237 ANTLSVVPGPSDPSRYNVQLNRGSSTQDVTSVVsGGEIGGLLRYRSDVLDPAMNELGRLALVVADQINSQLGQGIDLNGN 316

                        330
                 ....*....|.
gi 499817322 314 APVKNFLSVNS 324
Cdd:PRK05683 317 FGSSLFGDINS 327
flgK PRK08147
flagellar hook-associated protein FlgK; Validated
 1-455 2.85e-49

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236165 [Multi-domain]  Cd Length: 547  Bit Score: 176.41  E-value: 2.85e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTS---SVGGGAYGGGAGVYVDGVRRISDQYEVAQLwktNSD 77
Cdd:PRK08147   2 SSLINTAMSGLNAAQAALNTVSNNISNYNVAGYTRQTTILAqagSTLTAGGWIGNGVYVSGVQREYDAFITNQL---RAA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  78 VGFSKIQTSYLGQAEQV---FGADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQI 154
Cdd:PRK08147  79 QTQSSGLTTRYEQMSKIdnlLSDSTNSLSTTMQDFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKGV 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 155 NGQLGSSVKLVNTQLDIISKFNKDI---RAASAiGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIA 231
Cdd:PRK08147 159 NTAIGSSVDQINNYAKQIASLNDQItrlTGVGA-GASPNDLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQ 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 232 GNTKATLSTVPDPLNPANSNISIQFGKSQFVF--ENSV-GGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGT 308
Cdd:PRK08147 238 GSTAYQLAAVPSSADPTRTTVAYVDGTAGNIEipEKLLtTGSLGGLLTFRSQDLDQTRNQLGQLALAFADAFNTQHKAGF 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 309 DLSGAAPVKNF-----LSVNSVNPAGSLAISSGFT------PEDLALGLDGTQ--------------------------- 350
Cdd:PRK08147 318 DANGDAGEDFFsigkpAVLSNSKNTGTASLTAEYTdasavkATDYKISFDGTNwqvtrlsdnttftvtpdangktlefdg 397

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 351 -----------------------------------------------GDNSNLKALAALASKSLGftslGGAVSLGESFS 383
Cdd:PRK08147 398 lkvtvtgtpaandsftlkpvsdaivnmdvlitdeskiamaseadggdSDNRNGQALLDLQNKKLV----GGKKSFNDAYA 473

                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499817322 384 SIVGALGSASRQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:PRK08147 474 SLVSDVGNQTATLKTSSTTQANVVTQLTNQQQSVSGVNLDEEYGNLQRFQQYYLANAQVLQTASTLFDALLN 545
flgK PRK06945
flagellar hook-associated protein FlgK; Validated
 1-457 8.97e-46

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 235895 [Multi-domain]  Cd Length: 651  Bit Score: 168.27  E-value: 8.97e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGG---GAGVYVDGVRRISDQYEVAQLWKTNSD 77
Cdd:PRK06945   2 SSLLNIGLSGLNAAQWGLTTTGHNISNAATPGYSRQRVVQAEAGGQYTGSgylGQGVNVVTVKRQYSQYLSAQLNNAQAA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  78 VGFSKIQTSYLGQAEQVFGADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQINGQ 157
Cdd:PRK06945  82 SSSLSTYYSQISQLNNYLADPTAGLSPAITSFFTGLQNVANNPSDPSARQTMLSNAQTLASQFNAAGQQLDQLRQSVNTQ 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 158 LGSSVKLVNTQLDIISKFNKDI-RAASAIGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGNTKA 236
Cdd:PRK06945 162 LTSSVTQINSYTKQIAQLNDQIaKAESSQGQPPNDLLDQRDQLVSELSKLVGVTVVQQDDGGYNVFVGNGQPLVVGNQSY 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 237 TLSTVPDPLNPanSNISIQF----GKSQFVFENSV-GGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLS 311
Cdd:PRK06945 242 QLTTVPSPSDP--SRLTVAGykppGTTQELPDSSLtGGTLGGLLAFRSQTLDPAQNQLGRLAASLAAQFNAQNALGIDLN 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 312 GAAPVKNF-----------------------------------------------LSVNSV------------------- 325
Cdd:PRK06945 320 GNLGGDLFsvagptvyananntgsatltasitnasalttsdytlsydgtnytltrLSDGSVvgtatslptpppttidgls 399

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 326 -----------------------------------------------NPAGSLAISSG---------------------- 336
Cdd:PRK06945 400 lslsgtmnagdsflvqptrnaangfsvattdgsaiaaaspvrasagsTNTGTGAISQGsvssgyplpsgtttltydaatg 479

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 337 ---------------------------------------FTPEDLALGLDGT---------------QGDNSNLKALAAL 362
Cdd:PRK06945 480 tlsgfpagttvtvagtpptsvtitpattpvpytsgagisLVFNGVSVTLSGTpadgdtftigpntggTNDGRNALALAKL 559

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 363 ASKSlgfTSLGGAVSLGESFSSIVGALGSASRQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKV 442
Cdd:PRK06945 560 QNAK---TLDGGTATYTGAYAQLVNQVGNKASQLKVSSAAQTALLGQITAAQQSVSGVNLDEEAANLLRYQQAYQANAKV 636

                        650
                 ....*....|....*
gi 499817322 443 ITTAERLFQTVLNSF 457
Cdd:PRK06945 637 IQTASTLFDTLLGIF 651
flgK PRK07739
flagellar hook-associated protein FlgK; Validated
 4-455 3.60e-44

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236084 [Multi-domain]  Cd Length: 507  Bit Score: 161.72  E-value: 3.60e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   4 LNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVYVDG----------VRRISDQYEVAQLWK 73
Cdd:PRK07739   8 LETARRGLFAQQAALYVTGHNIANANTPGYTRQRVNLAATPPYPTPGMNRPKIPGqmgtgveagsVERIRDQFLDIQYRR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  74 TNSDVGFSKIQTSYLGQAEQVFG-ADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQRE 152
Cdd:PRK07739  88 ENNKLGYWETKADALSQMEDIMNePSDTGLNKVLDQFWNSLQELSKNPENLGARSVVRQRAQALAETFNYLSQSLTDIQN 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 153 QINGQLGSSVKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRVV---------EDAQGLVNISL 223
Cdd:PRK07739 168 DLKSEIDVTVKEINSLASQISDLNKQIAKVEPNGYLPNDLYDQRDLLLDELSKIVNITVEynksggnalEDAEGTFRIDI 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 224 EKGEP---LIAGNTkATLSTVPDPLNPAN-SNISIQFGKSQF------VFENSVGGSMGSLMTYRDTQLANSQ------- 286
Cdd:PRK07739 248 LGGNGkgtLVDGKD-STVNELSVNKDDVTgLVTDLSLGGTTVswddtgQPVNPSSGKLKGLLEMYGYMSGNGEekglype 326

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 287 --TYIDELAQHLANEFNNTLALGTDLSGA--APVKNFLSVNSVNPAGSLAISS---GFTPEDLALGLDGTQGDNSNLKAL 359
Cdd:PRK07739 327 mlNDLDKLAYTFATAFNEVHKQGYGLNGStgIDFFDGTGDSTKGAAKTIKVSDdilADLNNIAAASDDGELGDGSNALNL 406

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 360 AALASKSLGftSLGGAVSLGESFSSIVGALGSASRQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQAN 439
Cdd:PRK07739 407 ANLKDFKLN--SGLDTTTFDDFYQSLIGNLGVDAQEANRMAENQEVLVDQVDNRRQSVSGVSLDEEMTNMIKFQHAYNAA 484

                        490
                 ....*....|....*.
gi 499817322 440 AKVITTAERLFQTVLN 455
Cdd:PRK07739 485 ARMITAIDEMLDKIIN 500
flgK PRK07521
flagellar hook-associated protein FlgK; Validated
 4-455 1.66e-34

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236038 [Multi-domain]  Cd Length: 483  Bit Score: 134.29  E-value: 1.66e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   4 LNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGgagvyvdGVRRISDQYEVAQLWKTNSDVGFSKI 83
Cdd:PRK07521   7 LNTAQSGLTATSRQTSVVSRNIANAGTPGYSRREASLVSGPAGGQVV-------GISRAQDPALLAQRLLATSAAAAQDT 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  84 QTSYLGQAEQVFGADGNDISKG--LGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQINGQLGSS 161
Cdd:PRK07521  80 LADGLERLASTVGDNDYEGSPSarLSDFQAALQTAASSPDNTTLAQAAVDAAQDLANSLNDASDAVQSARADADAEIADS 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 162 VKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGnTKATLSTV 241
Cdd:PRK07521 160 VDTLNDLLAQFEDANNAVVSGTATGRDASDALDQRDKLLKQISQIVGVTTVTRDNNDMALYTDGGVTLFET-TPRTVTFT 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 242 PDPLNPANSNisiqfGKSQFV----------FENSVGGSMGSLMTYRDTQLANSQTYIDELAQHLANEF---NNTLALG- 307
Cdd:PRK07521 239 PTATYTAGTT-----GNAVYIdgvpltggsgVMPLAGGSLAALLQLRDEIAPTYQAQLDEIARGLITRFaesDPTGAAGd 313

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 308 ----TDLSGAAPVKNflsvNSVNPAGSLAISSGFTPE---DLALGLDGTQ--------------GDNSNLKALAALASKS 366
Cdd:PRK07521 314 pglfTDSGAPADPAA----GEAGLAGRISVNAAVDPSqggDPWLLRDGGIngaaylganttgaaGFSTRLNALVDALSAP 389

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 367 LGFTS---LGGAVSLGESFSSIVGALGSASRQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVI 443
Cdd:PRK07521 390 RTFDSaagLSGSSSLMDLAASSLSWLEQQRSSASSEASYASALLSRADEALSNATGVDTDDEMALLLDLEQSYAASAKVI 469

                        490
                 ....*....|..
gi 499817322 444 TTAERLFQTVLN 455
Cdd:PRK07521 470 STVDEMLDSLLD 481
flgK PRK06665
flagellar hook-associated protein FlgK; Validated
 4-455 8.58e-29

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180650 [Multi-domain]  Cd Length: 627  Bit Score: 119.39  E-value: 8.58e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   4 LNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVYVDG----------VRRISDQYEVAQLWK 73
Cdd:PRK06665   8 IEIGKRSLFAHKQALQTTGHNISNASTKGYSRQRVTMKTFDPLYAPSLNRAEKPGqigqgveiqsIERIRDELLDSRIIE 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  74 TNSDVGFSKIQTSYLGQAEQVFGADGN-DISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQRE 152
Cdd:PRK06665  88 ESGRLGYWKTKDKYLSQLEQVYNEPEDqSLRTRLDDFWDSWQDLSNYPEGLAERQVVLERAQSLGERIHDRYRSLERIRD 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 153 QINGQLGSSVKLVNTQLDIISKFNKDIRAASAIGTVPAALQDGRDAAINELASLIDIRV--VEDAQGLVNISlekGEPLI 230
Cdd:PRK06665 168 MANDEIEITVEEINNILRNIADLNEQIVKSQAMGDNPNDLLDRRDLLVDKLSSLIDVSIerSDPDEFMIHIG---GRHLV 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 231 AGNTKATLSTVPDPLNPANSNISIQFGKSQFVFEnsvGGSMGSLMTYRDTQLANSQTYIDELAQHLA---NEF------- 300
Cdd:PRK06665 245 QGNIANELDLEANPPNEGYWDILWSANGDPALLR---TGKLGALIELRDTDIRDEINELDTLAINIVdlvNEIhrsgfgl 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322     --------------------------------------------------------------------------------
Cdd:PRK06665 322 ngktgrdfftqeykltntrgnydsngdgqfdsthifrvngtnsidpdekigisgtlrfqasnkngtveipynatdtvndv 401

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 301 -----------------NNTLAL---------------------GTDL---------SGAAPVKNFLSVNSVN------- 326
Cdd:PRK06665 402 ikrinnsnaqvtaylnhNNKLVLkatkadddenpdfvirhiedsGDFLvgytgilnaSGPEGAYDYQRIDTINklqgnga 481

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 327 ---------PAGSLAISSGFT--PEDLALGL-----DGTQGDNSNLKALAALASKSLGFtslGGAVSLGESFSSIVGALG 390
Cdd:PRK06665 482 dytvsplkhPASWIKVNDIIRndPSNIAAGIgdptnPNGIGDGRAALAIASLRNSPVMV---GKSKTFDDFFANTISNIG 558

                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499817322 391 SASRQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:PRK06665 559 IKGETAEIEKESQNQIMKELEDLRQSVSGVNLDEELANMIEFQHGYNASARFISVSNELLDTIIN 623
flgK PRK12714
flagellar hook-associated protein FlgK; Provisional
 1-456 2.70e-26

flagellar hook-associated protein FlgK; Provisional


Pssm-ID: 183697 [Multi-domain]  Cd Length: 624  Bit Score: 111.97  E-value: 2.70e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGA---YGGGAGVYVDGVRRISDQYEVAQLWKTNSD 77
Cdd:PRK12714   1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDmgyAFVGNGAKITDVGRVADQLAISRLLDSGGE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  78 VGFSKIQTSYLGQAEQVFGADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQINGQ 157
Cdd:PRK12714  81 LSRLQQLSSLSNRVDALYSNTATNVAGLWSNFFDSTSALSSNASSTAERQSMLDSGNSLATRFKQLNGQMDSLSNEVNSG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 158 LGSSVKLVNTQLDIISKFNKDIraASAIGTVPAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGNTKAT 237
Cdd:PRK12714 161 LTSSVDEVNRLTQQIAKINGTI--GSSAQNAAPDLLDQRDALVSKLVGYTGGTAVIQDGGFMNVFTAGGQALVVGTTASK 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 238 LSTVPDPLNPANSNISIQF-GKSQFVFENSVGGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLSG---- 312
Cdd:PRK12714 239 LTTVADPYQPTKLQVAMQTqGQNVSLSPSSLGGQIGGLLEFRSSVLEPTQAELGRLAVGMASSFNAGHSQGMDLYGamgg 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322     --------------------------------------------------------------------------------
Cdd:PRK12714 319 nffnigsptvaanpsntgtaslsasfsnlsavdgqnvtlsfdgtnwkatradtgsavpmtgtgtaadplvlngvsmvvgg 398

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 313 --------------------------------AAPVKNFLSV--------------NSVNPA------------------ 328
Cdd:PRK12714 399 tpasgdkfllqptaglagslsvaitdpsriaaATPVKATATLanqgtgkisdvkvtNAQNPAlltpssiefidanqytid 478

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 329 --GSLAISSGFT--PEDLALGLDGT---------------QGDNSNLKALAALAS-KSLGftslGGAVSLGESFSSIVGA 388
Cdd:PRK12714 479 gaGPFAYTAGQTisANGWSFALDGApkagdtfgvgptgagSSDNGNAKLLAKVDDaKALN----GGTVTLNGALSGLTTS 554

                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499817322 389 LGSASRQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLNS 456
Cdd:PRK12714 555 VGSAARAANYSADAQKVINDQAQASRDSISGVNLDEEAANMLKLQQAYQAAAQMISTADTMFQAILGA 622
flgK PRK08471
flagellar hook-associated protein FlgK; Validated
 4-454 1.34e-21

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236270 [Multi-domain]  Cd Length: 613  Bit Score: 97.81  E-value: 1.34e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   4 LNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAG---VYVDGVRRISDQYEVAQLWKTNSDVGF 80
Cdd:PRK08471   8 LNTGYTGLQAAQVMVDTTGNNISNASSEFYTRQRVVQSAQAALNTGGGNVgtgTDIETIVRIHDEFVYSRYKKASTELEY 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  81 SKIQTSYLGQAEQVF-GADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQINGQLG 159
Cdd:PRK08471  88 TDYEFSTLQEASQYFpDLDDTGILKDLQDYFNAWNDFASNPKDSAQKQALAQKTETLTNNIKDTRERLDTLQKKVNEELK 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 160 SSVKLVNTQLDIISKFNKDIRAASAIGTVPAA--LQDGRDAAINELASLIDIRV--------------VEDAQGLVNISL 223
Cdd:PRK08471 168 VTVDEINSLGKQIAEINKQIKEVEAGKTLKHAneLRDKRDELELTLSKLVGANVfkssiksdsrldttSADFGESYNLNI 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 224 EkGEPLIAGNTKATLSTVPDPLNPANSNISIQF--GKSQFVFENSVGGSMGSLMTYRDTQLANS---------QTYIDEL 292
Cdd:PRK08471 248 G-GFNIVDGSNFHPLVLDEDENKGGFNQIYYESddFKRIDITDKISGGKVGALLDLRGRNYDGGsggtldgkiQDYIDNL 326

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 293 ---AQHLANEFNNTLALGT---------DLSGAAPVKNF-------------------------LSVNSV---------- 325
Cdd:PRK08471 327 dtfAKTLIESTNNIYAQSAtesiesdplSLKSDEALVDTnyniqngsfdlvvydtdgkevarktINIDVIttmndivqqi 406

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 326 -------------------------------------------------------NPAGSLAISSGFT------------ 338
Cdd:PRK08471 407 nantddnndnnanndvddyftasfnndtktgdglfqiqpknasqgytvsiedkgtNFPGALGLNRFFDgddasnislnss 486

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 339 ----PEDLALGLDGTQGDNSNLKALAALASKSLGFTSLGGAV---SLGESFSSIVGALGSASRQAKADAKTNTDLHTEAK 411
Cdd:PRK08471 487 ykkdPTTIRAWLAPVDGNNDVANKMQQLQYDKVNFYNNKGTIknmTIEEYYRFLTTKIASDTEKNNRINDTNKALLNSVK 566

                        570       580       590       600
                 ....*....|....*....|....*....|....*....|...
gi 499817322 412 SQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVL 454
Cdd:PRK08471 567 KEYQSISGVSTDEELVNLIKFQSSYGAAAKIITTIDQMLDTLL 609
flgK PRK06799
flagellar hook-associated protein FlgK; Validated
 5-454 1.24e-19

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180699 [Multi-domain]  Cd Length: 431  Bit Score: 90.71  E-value: 1.24e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   5 NIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVYVDGVR-----RISDQYEVAQLWKTNSDVG 79
Cdd:PRK06799   7 NTPLSGMLAAQMGLQTTQQNLSNIHTPGYVRQMVNYGSVGASGGLLPEQQIGYGVQtlgvdRITDEVKTKQYNDQLSQLS 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  80 FSKIQTSYLGQAEQVFGADG-NDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQINGQL 158
Cdd:PRK06799  87 YYNYMNSALSRVESMVGTTGkNSLSSLMDGFFNAFREVAKNPEQANYYDTLISETGKFTSQLNRLAKGLDELEAQTTEDI 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 159 GSSVKLVNTQLDIISKFNKDIRAASAigTVPAALQDGRDAAINELASLIDIRVvedaqglvniSLEKGEPLIAGNTKATL 238
Cdd:PRK06799 167 EAHVNEFNRLAKSLAEANKKIGQAGT--QVPNQLLDERDRILTEMSKYANIEV----------SYESMNPNIASVRMNGV 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 239 STVPdplnpANSNISIQFGKSQFVFENSVGGSM-----GSLMTYRDTQ--LANSQTYIDELAQHLANEFNNTLalGTDLs 311
Cdd:PRK06799 235 LTVN-----GQDTYPLQLNKTKEPMEFEIYGSEiplpsGAIISAIDTKakIKSYKKNLEELMSSLKKAVNTVM--GKSF- 306

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 312 gaapvknFLSVNsvnpAGSLAISSGFTpedlalgldgtqGDNSNLKALAALASKSLGFTSlgGAVSLGESFSS-----IV 386
Cdd:PRK06799 307 -------FVGDS----AKKWKLNPEFA------------KDVSKMKISAETANKLAAITD--DKYKEGLSYKQaldqfIV 361

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499817322 387 GALGSASRqAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVL 454
Cdd:PRK06799 362 GVASDKSA-VNAYQKIHTDLLEGIQQEKMSLEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLF 428
flgK PRK12715
flagellar hook-associated protein FlgK; Provisional
 1-324 6.94e-19

flagellar hook-associated protein FlgK; Provisional


Pssm-ID: 183698 [Multi-domain]  Cd Length: 649  Bit Score: 89.41  E-value: 6.94e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVM---TSSVGGGAYGGGAGVYVDGVRRISDQYEVAQLwktNSD 77
Cdd:PRK12715   1 MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQftpIASNRYAGSYIGAGVSVSSIYRNVDQFANAQV---RST 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  78 VGFSKIQTSYLGQAEQV---FGADGNDISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQI 154
Cdd:PRK12715  78 LSYRTQYDAFYNQAIQIdklLSQDGSSISVPLQTFFDSIGQLNSTPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNS 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 155 NGQLGSSVKLVNTQLDIISKFNKDIRAASAIgtvpAALQDGRDAAINELASLIDIRVVEDAQGLVNISLEKGEPLIAGNT 234
Cdd:PRK12715 158 TLQVTESVKIINRITKELAEVNGKLLGNNNI----PELLDHRDELLKQLSGYTDLSIFDQGDGTISVGIASGDMLVAGTQ 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 235 KATLSTVPDPLNPANSNISIQFGKSQFV--FENSVGGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLSG 312
Cdd:PRK12715 234 QRDLVVGTGKDSIFGTKIFLSSGGNNQVdiTDRLTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQTFNAQHKLGMDMNS 313

                        330
                 ....*....|..
gi 499817322 313 AAPVKNFLSVNS 324
Cdd:PRK12715 314 QIGKDFFTDFNS 325
flgK PRK08871
flagellar hook-associated protein FlgK; Validated
 2-358 2.35e-16

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 181572 [Multi-domain]  Cd Length: 626  Bit Score: 81.43  E-value: 2.35e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322   2 NMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSSVGGGAYGGGAGVY---VDGVRRISDQYEVAQLWKTNSDV 78
Cdd:PRK08871   4 DLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNDPRQFGGSTYGMgvhVENVRRSWDQFAVNELNLSTTNL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322  79 GFSKIQTSYLGQAEQVFGADGND-ISKGLGLVFAAMNSAMEQPNLIAHRQGIINETKALVQRVHSINESLSSQREQINGQ 157
Cdd:PRK08871  84 ANKTDTEANLDMLSSMLSSVASKkIPENLNEWFDAVKTLADSPNDLGARKVVLEKAKLISQTLNDFHETVRQQKDVTNKK 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 158 LGSSVKLVNTqldiISKFNKDIRaaSAIGTVPAA---LQDGRDAAINELASLIDIRVV--EDAQGLvNISLEKGEPLIAG 232
Cdd:PRK08871 164 LDLGVERINQ----IALEIRDIH--RLMMRTPGPhndLMDQHEKLVKELSQYTKVTVTprKNAEGF-NVHIGNGHTLVSG 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 233 NTKATLSTVPDPLNPANSNISIQFGKS-QFVFENSVGGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLALGTDLS 311
Cdd:PRK08871 237 TEASQLKMIDGYPDPHQRRLAMVEGKGlKAIKADDIGGKLGALLDMRDEHIPYLMDELGRLATGFSSEVNTLQSQGLDLR 316

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 499817322 312 GAAPVKNFLSVNSVNPAGSLAISSGFTPEDLALGLDgtqgDNSNLKA 358
Cdd:PRK08871 317 GNVGGNLFTDVNSEVIARSRVVTAPNSKADVAVFID----DISQLKG 359
Flg_bbr_C pfam06429
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ...
 394-455 3.64e-10

Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.


Pssm-ID: 428939 [Multi-domain]  Cd Length: 74  Bit Score: 55.73  E-value: 3.64e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499817322  394 RQAKADAKTNTDLHTEAKSQWASTSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:pfam06429  12 RETDGAPILGAGADGRVQQGYLEGSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQ 73
FlgE COG1749
Flagellar hook protein FlgE [Cell motility];
424-455 1.33e-06

Flagellar hook protein FlgE [Cell motility];


Pssm-ID: 441355 [Multi-domain]  Cd Length: 414  Bit Score: 50.56  E-value: 1.33e-06
                         10        20        30
                 ....*....|....*....|....*....|..
gi 499817322 424 EEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:COG1749  380 EELVNMIVAQRAYQANAKVITTSDEMLQTLVN 411
flgE PRK05682
flagellar hook protein FlgE; Validated
 418-455 3.48e-06

flagellar hook protein FlgE; Validated


Pssm-ID: 235557 [Multi-domain]  Cd Length: 407  Bit Score: 49.06  E-value: 3.48e-06
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 499817322 418 SGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:PRK05682 368 SNVDLSTELVNMIVAQRNYQANAKTIKTQDQLLQTLVN 405
flgG PRK12693
flagellar basal body rod protein FlgG; Provisional
 417-455 2.52e-05

flagellar basal body rod protein FlgG; Provisional


Pssm-ID: 183687 [Multi-domain]  Cd Length: 261  Bit Score: 45.62  E-value: 2.52e-05
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 499817322 417 TSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:PRK12693 221 TSNVNVVEELVNMITGQRAYEMNSKAISTADQMLQYVNQ 259
FlgG COG4786
Flagellar basal body rod protein FlgG [Cell motility];
417-455 2.64e-05

Flagellar basal body rod protein FlgG [Cell motility];


Pssm-ID: 443816 [Multi-domain]  Cd Length: 260  Bit Score: 45.58  E-value: 2.64e-05
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 499817322 417 TSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:COG4786  219 GSNVDVVEEMVDMIEAQRAYEANSKVIQTADEMLGKANN 257
flgC PRK05681
flagellar basal body rod protein FlgC; Reviewed
 420-454 8.10e-04

flagellar basal body rod protein FlgC; Reviewed


Pssm-ID: 235556 [Multi-domain]  Cd Length: 135  Bit Score: 39.42  E-value: 8.10e-04
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 499817322 420 VNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVL 454
Cdd:PRK05681  96 VNVVVEMVDMISASRSYEANVEVLNAAKSMMQKTL 130
FlgEFG_subfam TIGR03506
flagellar hook-basal body protein; This model encompasses three closely related flagellar ...
 2-42 9.52e-04

flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.


Pssm-ID: 274616 [Multi-domain]  Cd Length: 231  Bit Score: 40.70  E-value: 9.52e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 499817322    2 NMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSS 42
Cdd:TIGR03506   1 MALYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQD 41
FlgC COG1558
Flagellar basal body rod protein FlgC [Cell motility];
420-455 2.29e-03

Flagellar basal body rod protein FlgC [Cell motility];


Pssm-ID: 441166 [Multi-domain]  Cd Length: 135  Bit Score: 38.17  E-value: 2.29e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 499817322 420 VNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455
Cdd:COG1558   97 VNVVEEMVDMISASRSYEANVEVINTAKSMLLKTLE 132
FlgC TIGR01395
flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components ...
 418-454 4.97e-03

flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components of bacterial flagella that share a domain described by pfam00460. FlgC is part of the basal body. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 130462 [Multi-domain]  Cd Length: 135  Bit Score: 37.34  E-value: 4.97e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 499817322  418 SGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVL 454
Cdd:TIGR01395  95 PNVNVVEEMVDMIEASRSYEANVQVFNTAKSMFLRTL 131
flgE PRK08425
flagellar hook protein FlgE; Validated
 358-455 6.12e-03

flagellar hook protein FlgE; Validated


Pssm-ID: 236263 [Multi-domain]  Cd Length: 731  Bit Score: 38.91  E-value: 6.12e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499817322 358 ALAALASKSlGFTSLGGAV--SLGESFSSIVGALGSASR---QAKADAKTNTDLhteaksqwaSTSGVNpdeegvnLIVY 432
Cdd:PRK08425 643 ALANFANNA-GLQAEGGNVfsQTANSGQAVIGAAGTGGRgsiSGSKLEMSNVDL---------SRSLTQ-------LIVI 705

                         90       100
                 ....*....|....*....|...
gi 499817322 433 QQAYQANAKVITTAERLFQTVLN 455
Cdd:PRK08425 706 QRGFQANSKTITTSDQMLNTLLQ 728
flgE PRK06803
flagellar basal body protein FlaE;
417-457 7.95e-03

flagellar basal body protein FlaE;


Pssm-ID: 235862 [Multi-domain]  Cd Length: 402  Bit Score: 38.60  E-value: 7.95e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 499817322 417 TSGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLNSF 457
Cdd:PRK06803 362 GSNVDITAELVGLMTAQRNYQANAKVISTNDTMQQALFNAI 402
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH