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Conserved domains on  [gi|501990737|ref|WP_012686173|]
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MULTISPECIES: menaquinol-cytochrome c reductase cytochrome b subunit [Brevibacillus]

Protein Classification

cytochrome b/b6( domain architecture ID 11480025)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK03735 PRK03735
cytochrome b6; Provisional
 1-223 9.01e-141

cytochrome b6; Provisional


:

Pssm-ID: 179639  Cd Length: 223  Bit Score: 392.54  E-value: 9.01e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737   1 MMQKMYDWVDERLNITPMWRDLADHEVPEHVNPAHHFSAFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYL 80
Cdd:PRK03735   1 MLSKVYDWFDERLDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  81 QNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGV 160
Cdd:PRK03735  81 QNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRELNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGS 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 501990737 161 QIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHVFFLPGALLGLLGAHFVMIRSQGISGPL 223
Cdd:PRK03735 161 QIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHVFFLPWALAVLMLAHFLMIRKQGISGPL 223
 
Name Accession Description Interval E-value
PRK03735 PRK03735
cytochrome b6; Provisional
 1-223 9.01e-141

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 392.54  E-value: 9.01e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737   1 MMQKMYDWVDERLNITPMWRDLADHEVPEHVNPAHHFSAFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYL 80
Cdd:PRK03735   1 MLSKVYDWFDERLDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  81 QNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGV 160
Cdd:PRK03735  81 QNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRELNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGS 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 501990737 161 QIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHVFFLPGALLGLLGAHFVMIRSQGISGPL 223
Cdd:PRK03735 161 QIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHVFFLPWALAVLMLAHFLMIRKQGISGPL 223
cytb_ExtP NF040969
selenite/tellurite reduction operon b-type cytochrome ExtP;
18-222 8.55e-106

selenite/tellurite reduction operon b-type cytochrome ExtP;


Pssm-ID: 468899  Cd Length: 205  Bit Score: 303.44  E-value: 8.55e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  18 MWRDLADHEVPEHVNPAHHFSAFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWG 97
Cdd:NF040969   1 MLNDLALHLVPRHVPRRALKFSYTWCLGGLTFLLFVILTVTGIFLMFYYVPTPEAAYESVQYLQNEVAFGQLVRNMHHWA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  98 ASLVIVMMFLHTLRVFFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLL 177
Cdd:NF040969  81 ANLMVVMVFLHMLRVFYTGSYKPPREFNWVVGVGLLVLTLGLSFTGYLLPWDQLAYWAVTVGTNIAGSIPVVGTLLQLLQ 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 501990737 178 TGGDILGAQTLTRFFAIHVFFLPGALLGLLGAHFVMIRSQGISGP 222
Cdd:NF040969 161 LGGSEVGAATLTRFYALHVFVLPAALIILMAAHFWRIRKQGISGP 205
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
2-222 4.92e-79

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 242.00  E-value: 4.92e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737   2 MQKMYDWVDERLNITPMWRDLADHEVPEHVNpahhfsaFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQ 81
Cdd:COG1290    7 ASGLADWLDERLPLASLVREHLEYPFPKNWN-------FSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIM 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  82 NEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQ 161
Cdd:COG1290   80 RDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKPRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITG 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 501990737 162 IADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHVFFLPGALLGLLGAHFVMIRSQGISGP 222
Cdd:COG1290  160 LFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHVLLLPALLLALVVLHLWLLHRHGHNNP 220
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 33-220 5.94e-47

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 153.68  E-value: 5.94e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  33 PAHHFSAFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRV 112
Cdd:cd00284   14 PPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRG 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737 113 FFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFF 192
Cdd:cd00284   94 LYYGSYKKPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFF 173

                        170       180
                 ....*....|....*....|....*...
gi 501990737 193 AIHvFFLPGALLGLLGAHFVMIRSQGIS 220
Cdd:cd00284  174 ALH-FLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
42-218 9.97e-43

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 142.52  E-value: 9.97e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737   42 YCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKP 121
Cdd:pfam00033  14 YNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSYP 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  122 RELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHvFFLPG 201
Cdd:pfam00033  94 RELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLH-FLLPF 172

                         170
                  ....*....|....*..
gi 501990737  202 ALLGLLGAHFVMIRSQG 218
Cdd:pfam00033 173 ILAILMLLHLLFLHETG 189
 
Name Accession Description Interval E-value
PRK03735 PRK03735
cytochrome b6; Provisional
 1-223 9.01e-141

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 392.54  E-value: 9.01e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737   1 MMQKMYDWVDERLNITPMWRDLADHEVPEHVNPAHHFSAFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYL 80
Cdd:PRK03735   1 MLSKVYDWFDERLDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  81 QNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGV 160
Cdd:PRK03735  81 QNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRELNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGS 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 501990737 161 QIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHVFFLPGALLGLLGAHFVMIRSQGISGPL 223
Cdd:PRK03735 161 QIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHVFFLPWALAVLMLAHFLMIRKQGISGPL 223
cytb_ExtP NF040969
selenite/tellurite reduction operon b-type cytochrome ExtP;
18-222 8.55e-106

selenite/tellurite reduction operon b-type cytochrome ExtP;


Pssm-ID: 468899  Cd Length: 205  Bit Score: 303.44  E-value: 8.55e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  18 MWRDLADHEVPEHVNPAHHFSAFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWG 97
Cdd:NF040969   1 MLNDLALHLVPRHVPRRALKFSYTWCLGGLTFLLFVILTVTGIFLMFYYVPTPEAAYESVQYLQNEVAFGQLVRNMHHWA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  98 ASLVIVMMFLHTLRVFFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLL 177
Cdd:NF040969  81 ANLMVVMVFLHMLRVFYTGSYKPPREFNWVVGVGLLVLTLGLSFTGYLLPWDQLAYWAVTVGTNIAGSIPVVGTLLQLLQ 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 501990737 178 TGGDILGAQTLTRFFAIHVFFLPGALLGLLGAHFVMIRSQGISGP 222
Cdd:NF040969 161 LGGSEVGAATLTRFYALHVFVLPAALIILMAAHFWRIRKQGISGP 205
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
2-222 4.92e-79

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 242.00  E-value: 4.92e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737   2 MQKMYDWVDERLNITPMWRDLADHEVPEHVNpahhfsaFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQ 81
Cdd:COG1290    7 ASGLADWLDERLPLASLVREHLEYPFPKNWN-------FSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIM 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  82 NEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQ 161
Cdd:COG1290   80 RDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKPRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITG 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 501990737 162 IADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHVFFLPGALLGLLGAHFVMIRSQGISGP 222
Cdd:COG1290  160 LFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHVLLLPALLLALVVLHLWLLHRHGHNNP 220
petB CHL00070
cytochrome b6
 2-223 5.42e-69

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 210.35  E-value: 5.42e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737   2 MQKMYDWVDERLNITPMWRDLADHEVPEHVNpahhfsaFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQ 81
Cdd:CHL00070   1 MSKVYDWFEERLEIQAIADDITSKYVPPHVN-------IFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIM 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  82 NEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQ 161
Cdd:CHL00070  74 TEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTG 153

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501990737 162 IADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHVFFLPGALLGLLGAHFVMIRSQGISGPL 223
Cdd:CHL00070 154 VPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 33-220 5.94e-47

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 153.68  E-value: 5.94e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  33 PAHHFSAFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRV 112
Cdd:cd00284   14 PPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRG 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737 113 FFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFF 192
Cdd:cd00284   94 LYYGSYKKPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFF 173

                        170       180
                 ....*....|....*....|....*...
gi 501990737 193 AIHvFFLPGALLGLLGAHFVMIRSQGIS 220
Cdd:cd00284  174 ALH-FLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
42-218 9.97e-43

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 142.52  E-value: 9.97e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737   42 YCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKP 121
Cdd:pfam00033  14 YNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSYP 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  122 RELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHvFFLPG 201
Cdd:pfam00033  94 RELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLH-FLLPF 172

                         170
                  ....*....|....*..
gi 501990737  202 ALLGLLGAHFVMIRSQG 218
Cdd:pfam00033 173 ILAILMLLHLLFLHETG 189
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
99-222 8.73e-34

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 118.88  E-value: 8.73e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737   99 SLVIVMMFLHTLRVFFTGAYKKPRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLT 178
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 501990737  179 GGDILGAQTLTRFFAIHVFFLPGALLGLLGAHFVMIRSQGISGP 222
Cdd:pfam13631  81 GGPFPGTATIPRFYALHILLLPGLILALIVAHLLLVEKHGQFPP 124
CYTB MTH00145
cytochrome b; Provisional
 44-195 5.81e-28

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 108.84  E-value: 5.81e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRe 123
Cdd:MTH00145  34 FGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQH- 112

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501990737 124 lNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIH 195
Cdd:MTH00145 113 -TWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLH 183
CYTB MTH00156
cytochrome b; Provisional
 44-195 1.35e-27

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 107.18  E-value: 1.35e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPre 123
Cdd:MTH00156  23 FGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLK-- 100

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501990737 124 LNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIH 195
Cdd:MTH00156 101 HTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFH 172
CYTB MTH00191
cytochrome b; Provisional
 44-223 1.97e-27

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 106.92  E-value: 1.97e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKkpRE 123
Cdd:MTH00191  30 FGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYL--NK 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737 124 LNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHvFFLPGAL 203
Cdd:MTH00191 108 ETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFH-FLLPFLI 186

                        170       180
                 ....*....|....*....|
gi 501990737 204 LGLLGAHFVMIRSQGISGPL 223
Cdd:MTH00191 187 AALSLIHLLFLHETGSNNPL 206
CYTB MTH00016
cytochrome b; Validated
 44-223 3.19e-27

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 106.69  E-value: 3.19e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRe 123
Cdd:MTH00016  34 FGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLME- 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737 124 lNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHvFFLPGAL 203
Cdd:MTH00016 113 -TWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALH-FLLPFVI 190

                        170       180
                 ....*....|....*....|
gi 501990737 204 LGLLGAHFVMIRSQGISGPL 223
Cdd:MTH00016 191 AALSMIHLLFLHQTGSNNPL 210
CYTB MTH00224
cytochrome b; Provisional
 44-223 8.52e-26

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 103.08  E-value: 8.52e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRe 123
Cdd:MTH00224  34 YGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSE- 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737 124 lNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHvFFLPGAL 203
Cdd:MTH00224 113 -TWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFH-FLLPFAI 190

                        170       180
                 ....*....|....*....|
gi 501990737 204 LGLLGAHFVMIRSQGISGPL 223
Cdd:MTH00224 191 MGATILHIMFLHQTGSNNPI 210
CYTB MTH00053
cytochrome b; Provisional
 39-195 4.47e-25

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 100.94  E-value: 4.47e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  39 AFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAY 118
Cdd:MTH00053  29 SYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSY 108

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 501990737 119 KKprELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIH 195
Cdd:MTH00053 109 TK--IIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLH 183
CYTB MTH00034
cytochrome b; Validated
 44-198 2.19e-24

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 99.01  E-value: 2.19e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKprE 123
Cdd:MTH00034  33 FGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVN--I 110

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 501990737 124 LNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHVFF 198
Cdd:MTH00034 111 ETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLF 185
CYTB MTH00100
cytochrome b; Provisional
 44-195 4.05e-24

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 98.17  E-value: 4.05e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRe 123
Cdd:MTH00100  33 FGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLE- 111

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501990737 124 lNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIH 195
Cdd:MTH00100 112 -TWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFH 182
CYTB MTH00046
cytochrome b; Validated
 42-196 7.84e-24

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 97.36  E-value: 7.84e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  42 YCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKp 121
Cdd:MTH00046  22 WCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSK- 100

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 501990737 122 rELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHV 196
Cdd:MTH00046 101 -KGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHI 174
CYTB MTH00131
cytochrome b; Provisional
 44-198 1.90e-23

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 96.65  E-value: 1.90e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRe 123
Cdd:MTH00131  33 FGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKE- 111

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 501990737 124 lNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHVFF 198
Cdd:MTH00131 112 -TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLF 185
CYTB MTH00033
cytochrome b; Provisional
 39-223 2.31e-23

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 96.16  E-value: 2.31e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  39 AFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAY 118
Cdd:MTH00033  25 SYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGY 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737 119 KkpRELNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHvFF 198
Cdd:MTH00033 105 S--RVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLH-YL 181

                        170       180
                 ....*....|....*....|....*
gi 501990737 199 LPGALLGLLGAHFVMIRSQGISGPL 223
Cdd:MTH00033 182 LPFVLVGLVLAHLLTLHEKGSNEPL 206
CYTB MTH00119
cytochrome b; Provisional
 44-195 2.56e-23

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 96.12  E-value: 2.56e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYkkpre 123
Cdd:MTH00119  34 FGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSY----- 108

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 501990737 124 LN---WVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIH 195
Cdd:MTH00119 109 LYketWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALH 183
CYTB MTH00022
cytochrome b; Validated
 39-223 3.27e-23

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 95.92  E-value: 3.27e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  39 AFVYCFGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAY 118
Cdd:MTH00022  27 SYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGY 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737 119 KKPRElnWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHVFF 198
Cdd:MTH00022 107 LKFHV--WNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLF 184

                        170       180
                 ....*....|....*....|....*
gi 501990737 199 lPGALLGLLGAHFVMIRSQGISGPL 223
Cdd:MTH00022 185 -PFILAFLVIVHLIYLHVDGSNNPI 208
CYTB MTH00086
cytochrome b; Provisional
 44-223 3.56e-22

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 92.70  E-value: 3.56e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKkpRE 123
Cdd:MTH00086  22 FGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYR--LK 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737 124 LNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHvFFLPGAL 203
Cdd:MTH00086 100 KVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLH-FLLPWGL 178

                        170       180
                 ....*....|....*....|
gi 501990737 204 LGLLGAHFVMIRSQGISGPL 223
Cdd:MTH00086 179 LVLVLFHLIFLHSTGSTSSL 198
CYTB MTH00074
cytochrome b; Provisional
 44-198 1.31e-21

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 91.28  E-value: 1.31e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501990737  44 FGGLTFFITVIQILSGMFLTMYYVPDVINAYESVKYLQNEVAFGVIVRGMHHWGASLVIVMMFLHTLRVFFTGAYKKPRe 123
Cdd:MTH00074  34 FGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKE- 112

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 501990737 124 lNWVVGVLIFFVMLGLGFTGYLLPWDNTAYFATKVGVQIADSVPFIGPYVKTLLTGGDILGAQTLTRFFAIHVFF 198
Cdd:MTH00074 113 -TWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLL 186
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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