Swarming motility protein; This domain family is found in Bacillus. Members of this family are Swra proteins involved in swarming motility (a multicellular movement of hyper-flagellated cells on a surface). SwrA is a key transcription factor facilitating this cascade. It acts synergistically with DegU to drive the fla/che operon encoding flagella components, chemotaxis constituents and the alternative sigma factor sigmaD, which is regarded as the primary event in the development of motility. LonA protease of Bacillus subtilis inhibits SwrA by proteolytically restricting its accumulation. SwrA does not contain any known DNA binding domain, and it has been shown to interact with the N-terminal domain of DegU. Anecdotally, in most laboratory strains, e.g. 168, the swrA coding sequence contains a nucleotide insertion that prematurely interrupts its reading frame, causing a non-swarming phenotype strain.

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505064019    1 MKRASIVREKKYYELVEQLKDRTQDVTFSATKALSLLMLFSRYLVNYTNVESVNDINEECAKHYFNYLMKNHKRLGINLT 80
Cdd:pfam17423   1 MKRASIVREKKYYELVEQLKVRSQDVTFSATKAVGLLMLFSRYLVNYTSVESVEDINEDCAELYFNYLMDNHKRLGINLT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 505064019   81 DIKRSMHLISGLLDVDVNHYLKDFSLSNVTLWMTQE 116
Cdd:pfam17423  81 DIKRSMQLIGDILDVEVNHYLKDFSLSNVTLWMSQE 116

Swarming motility protein; This domain family is found in Bacillus. Members of this family are Swra proteins involved in swarming motility (a multicellular movement of hyper-flagellated cells on a surface). SwrA is a key transcription factor facilitating this cascade. It acts synergistically with DegU to drive the fla/che operon encoding flagella components, chemotaxis constituents and the alternative sigma factor sigmaD, which is regarded as the primary event in the development of motility. LonA protease of Bacillus subtilis inhibits SwrA by proteolytically restricting its accumulation. SwrA does not contain any known DNA binding domain, and it has been shown to interact with the N-terminal domain of DegU. Anecdotally, in most laboratory strains, e.g. 168, the swrA coding sequence contains a nucleotide insertion that prematurely interrupts its reading frame, causing a non-swarming phenotype strain.

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505064019    1 MKRASIVREKKYYELVEQLKDRTQDVTFSATKALSLLMLFSRYLVNYTNVESVNDINEECAKHYFNYLMKNHKRLGINLT 80
Cdd:pfam17423   1 MKRASIVREKKYYELVEQLKVRSQDVTFSATKAVGLLMLFSRYLVNYTSVESVEDINEDCAELYFNYLMDNHKRLGINLT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 505064019   81 DIKRSMHLISGLLDVDVNHYLKDFSLSNVTLWMTQE 116
Cdd:pfam17423  81 DIKRSMQLIGDILDVEVNHYLKDFSLSNVTLWMSQE 116

Swarming motility protein; This domain family is found in Bacillus. Members of this family are Swra proteins involved in swarming motility (a multicellular movement of hyper-flagellated cells on a surface). SwrA is a key transcription factor facilitating this cascade. It acts synergistically with DegU to drive the fla/che operon encoding flagella components, chemotaxis constituents and the alternative sigma factor sigmaD, which is regarded as the primary event in the development of motility. LonA protease of Bacillus subtilis inhibits SwrA by proteolytically restricting its accumulation. SwrA does not contain any known DNA binding domain, and it has been shown to interact with the N-terminal domain of DegU. Anecdotally, in most laboratory strains, e.g. 168, the swrA coding sequence contains a nucleotide insertion that prematurely interrupts its reading frame, causing a non-swarming phenotype strain.

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505064019    1 MKRASIVREKKYYELVEQLKDRTQDVTFSATKALSLLMLFSRYLVNYTNVESVNDINEECAKHYFNYLMKNHKRLGINLT 80
Cdd:pfam17423   1 MKRASIVREKKYYELVEQLKVRSQDVTFSATKAVGLLMLFSRYLVNYTSVESVEDINEDCAELYFNYLMDNHKRLGINLT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 505064019   81 DIKRSMHLISGLLDVDVNHYLKDFSLSNVTLWMTQE 116
Cdd:pfam17423  81 DIKRSMQLIGDILDVEVNHYLKDFSLSNVTLWMSQE 116