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MULTISPECIES: flagellar motor switch protein FliN [Aeromonas]
flagellar motor switch protein FliN( domain architecture ID 11483490)
flagellar motor switch protein FliN is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
fliN | PRK08983 | flagellar motor switch protein FliN; |
6-130 | 3.27e-72 | |||
flagellar motor switch protein FliN; : Pssm-ID: 236360 [Multi-domain] Cd Length: 127 Bit Score: 211.53 E-value: 3.27e-72
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Name | Accession | Description | Interval | E-value | |||
fliN | PRK08983 | flagellar motor switch protein FliN; |
6-130 | 3.27e-72 | |||
flagellar motor switch protein FliN; Pssm-ID: 236360 [Multi-domain] Cd Length: 127 Bit Score: 211.53 E-value: 3.27e-72
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FliN | COG1886 | Flagellar motor switch/type III secretory pathway protein FliN [Cell motility, Intracellular ... |
15-121 | 2.68e-32 | |||
Flagellar motor switch/type III secretory pathway protein FliN [Cell motility, Intracellular trafficking, secretion, and vesicular transport]; Pssm-ID: 441490 [Multi-domain] Cd Length: 172 Bit Score: 112.02 E-value: 2.68e-32
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fliN | TIGR02480 | flagellar motor switch protein FliN; Proteins that consist largely of the domain described by ... |
47-122 | 1.05e-31 | |||
flagellar motor switch protein FliN; Proteins that consist largely of the domain described by this model for this protein family can be designated flagellar motor switch protein FliN. Longer proteins in which this region is a C-terminal domain typically are designated FliY. More distantly related sequences, outside the scope of this family, are associated with type III secretion and include the surface presentation of antigens protein SpaO required or invasion of host cells by Salmonella enterica. [Cellular processes, Chemotaxis and motility] Pssm-ID: 131533 [Multi-domain] Cd Length: 77 Bit Score: 107.30 E-value: 1.05e-31
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FliMN_C | pfam01052 | Type III flagellar switch regulator (C-ring) FliN C-term; This family includes the C-terminal ... |
56-121 | 9.95e-21 | |||
Type III flagellar switch regulator (C-ring) FliN C-term; This family includes the C-terminal region of flagellar motor switch proteins FliN and FliM. It is associated with family FliM, pfam02154 and family FliN_N pfam16973. Pssm-ID: 460043 [Multi-domain] Cd Length: 66 Bit Score: 78.92 E-value: 9.95e-21
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Name | Accession | Description | Interval | E-value | |||
fliN | PRK08983 | flagellar motor switch protein FliN; |
6-130 | 3.27e-72 | |||
flagellar motor switch protein FliN; Pssm-ID: 236360 [Multi-domain] Cd Length: 127 Bit Score: 211.53 E-value: 3.27e-72
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fliN | PRK05698 | flagellar motor switch protein FliN; |
6-130 | 2.86e-54 | |||
flagellar motor switch protein FliN; Pssm-ID: 168189 [Multi-domain] Cd Length: 155 Bit Score: 167.28 E-value: 2.86e-54
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PRK08119 | PRK08119 | flagellar motor switch protein; Validated |
25-130 | 8.00e-39 | |||
flagellar motor switch protein; Validated Pssm-ID: 236154 [Multi-domain] Cd Length: 382 Bit Score: 133.83 E-value: 8.00e-39
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fliN | PRK07963 | flagellar motor switch protein FliN; Validated |
5-129 | 3.21e-34 | |||
flagellar motor switch protein FliN; Validated Pssm-ID: 181183 [Multi-domain] Cd Length: 137 Bit Score: 115.66 E-value: 3.21e-34
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FliN | COG1886 | Flagellar motor switch/type III secretory pathway protein FliN [Cell motility, Intracellular ... |
15-121 | 2.68e-32 | |||
Flagellar motor switch/type III secretory pathway protein FliN [Cell motility, Intracellular trafficking, secretion, and vesicular transport]; Pssm-ID: 441490 [Multi-domain] Cd Length: 172 Bit Score: 112.02 E-value: 2.68e-32
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fliN | TIGR02480 | flagellar motor switch protein FliN; Proteins that consist largely of the domain described by ... |
47-122 | 1.05e-31 | |||
flagellar motor switch protein FliN; Proteins that consist largely of the domain described by this model for this protein family can be designated flagellar motor switch protein FliN. Longer proteins in which this region is a C-terminal domain typically are designated FliY. More distantly related sequences, outside the scope of this family, are associated with type III secretion and include the surface presentation of antigens protein SpaO required or invasion of host cells by Salmonella enterica. [Cellular processes, Chemotaxis and motility] Pssm-ID: 131533 [Multi-domain] Cd Length: 77 Bit Score: 107.30 E-value: 1.05e-31
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PRK08916 | PRK08916 | flagellar motor switch protein FliN; |
28-120 | 1.18e-23 | |||
flagellar motor switch protein FliN; Pssm-ID: 236350 [Multi-domain] Cd Length: 116 Bit Score: 88.27 E-value: 1.18e-23
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FliMN_C | pfam01052 | Type III flagellar switch regulator (C-ring) FliN C-term; This family includes the C-terminal ... |
56-121 | 9.95e-21 | |||
Type III flagellar switch regulator (C-ring) FliN C-term; This family includes the C-terminal region of flagellar motor switch proteins FliN and FliM. It is associated with family FliM, pfam02154 and family FliN_N pfam16973. Pssm-ID: 460043 [Multi-domain] Cd Length: 66 Bit Score: 78.92 E-value: 9.95e-21
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PRK08432 | PRK08432 | flagellar motor switch protein FliY; Validated |
19-130 | 4.65e-17 | |||
flagellar motor switch protein FliY; Validated Pssm-ID: 236264 [Multi-domain] Cd Length: 283 Bit Score: 74.66 E-value: 4.65e-17
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PRK06782 | PRK06782 | flagellar motor switch protein; Reviewed |
10-120 | 9.88e-15 | |||
flagellar motor switch protein; Reviewed Pssm-ID: 235861 [Multi-domain] Cd Length: 528 Bit Score: 69.09 E-value: 9.88e-15
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PRK08433 | PRK08433 | flagellar motor switch protein FliN; |
49-120 | 9.69e-13 | |||
flagellar motor switch protein FliN; Pssm-ID: 181423 [Multi-domain] Cd Length: 111 Bit Score: 60.15 E-value: 9.69e-13
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FliM | COG1868 | Flagellar motor switch protein FliM [Cell motility]; |
36-124 | 1.01e-12 | |||
Flagellar motor switch protein FliM [Cell motility]; Pssm-ID: 441473 [Multi-domain] Cd Length: 326 Bit Score: 63.26 E-value: 1.01e-12
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SpaO_YscQ | TIGR02551 | type III secretion system apparatus protein YscQ/HrcQ; Genes in this family are found in type ... |
53-117 | 1.55e-12 | |||
type III secretion system apparatus protein YscQ/HrcQ; Genes in this family are found in type III secretion operons. The gene (YscQ) in Yersinia is essential for YOPs secretion, while SpaO in Shigella is involved in the Surface Presentation of Antigens apparatus found on the virulence plasmid, and HrcQ is involved in the Harpin secretory system in organisms like Pseudomonas syringae. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis] Pssm-ID: 274196 [Multi-domain] Cd Length: 298 Bit Score: 62.43 E-value: 1.55e-12
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PRK06933 | PRK06933 | YscQ/HrcQ family type III secretion apparatus protein; |
53-117 | 7.14e-10 | |||
YscQ/HrcQ family type III secretion apparatus protein; Pssm-ID: 235891 [Multi-domain] Cd Length: 308 Bit Score: 55.13 E-value: 7.14e-10
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fliM | PRK06666 | flagellar motor switch protein FliM; Validated |
51-128 | 8.50e-07 | |||
flagellar motor switch protein FliM; Validated Pssm-ID: 235849 [Multi-domain] Cd Length: 337 Bit Score: 46.37 E-value: 8.50e-07
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PRK06788 | PRK06788 | flagellar motor switch protein; Validated |
25-128 | 1.27e-06 | |||
flagellar motor switch protein; Validated Pssm-ID: 180693 [Multi-domain] Cd Length: 119 Bit Score: 44.10 E-value: 1.27e-06
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PRK05933 | PRK05933 | type III secretion system protein; Validated |
25-119 | 6.41e-06 | |||
type III secretion system protein; Validated Pssm-ID: 180315 [Multi-domain] Cd Length: 372 Bit Score: 43.68 E-value: 6.41e-06
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PRK08158 | PRK08158 | YscQ/HrcQ family type III secretion apparatus protein; |
42-116 | 9.30e-06 | |||
YscQ/HrcQ family type III secretion apparatus protein; Pssm-ID: 181259 [Multi-domain] Cd Length: 303 Bit Score: 43.32 E-value: 9.30e-06
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PRK06789 | PRK06789 | flagellar motor switch protein; Validated |
53-119 | 4.36e-05 | |||
flagellar motor switch protein; Validated Pssm-ID: 180694 [Multi-domain] Cd Length: 74 Bit Score: 39.08 E-value: 4.36e-05
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PRK06033 | PRK06033 | flagellar motor switch protein FliN; |
50-117 | 7.72e-05 | |||
flagellar motor switch protein FliN; Pssm-ID: 180359 [Multi-domain] Cd Length: 83 Bit Score: 38.59 E-value: 7.72e-05
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PRK08035 | PRK08035 | YscQ/HrcQ family type III secretion apparatus protein; |
34-117 | 2.24e-04 | |||
YscQ/HrcQ family type III secretion apparatus protein; Pssm-ID: 181204 [Multi-domain] Cd Length: 323 Bit Score: 39.41 E-value: 2.24e-04
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Blast search parameters | ||||
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