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Conserved domains on  [gi|518172602|ref|WP_019342810|]
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flagellar basal body rod protein FlgB [Stutzerimonas stutzeri]

Protein Classification

flagellar basal body rod protein FlgB( domain architecture ID 11448558)

flagellar basal body rod protein FlgB forms, together with FlgC and FlgF, the proximal portion of the central rod at the core of the flagellar organelle's basal body

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FlgB COG1815
Flagellar basal body rod protein FlgB [Cell motility];
1-134 1.76e-54

Flagellar basal body rod protein FlgB [Cell motility];


:

Pssm-ID: 441420  Cd Length: 135  Bit Score: 167.00  E-value: 1.76e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   1 MSINFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLAAQNSKNQGGFGVAVTSNKHIAAQGMEIADP 80
Cdd:COG1815    1 MSILFDKTFGLLEKALDLRSLRQEVIASNIANADTPGYKARDVDFEAALKAALGGGSAGLALATTNPRHIPGSAGSSVSP 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 518172602  81 GLRFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALRGE 134
Cdd:COG1815   81 EVLYRTPTQPSLDGNTVDLDEEMAKLAENALQYQAALTFLNKKFSMLKTAIKGG 134
 
Name Accession Description Interval E-value
FlgB COG1815
Flagellar basal body rod protein FlgB [Cell motility];
1-134 1.76e-54

Flagellar basal body rod protein FlgB [Cell motility];


Pssm-ID: 441420  Cd Length: 135  Bit Score: 167.00  E-value: 1.76e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   1 MSINFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLAAQNSKNQGGFGVAVTSNKHIAAQGMEIADP 80
Cdd:COG1815    1 MSILFDKTFGLLEKALDLRSLRQEVIASNIANADTPGYKARDVDFEAALKAALGGGSAGLALATTNPRHIPGSAGSSVSP 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 518172602  81 GLRFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALRGE 134
Cdd:COG1815   81 EVLYRTPTQPSLDGNTVDLDEEMAKLAENALQYQAALTFLNKKFSMLKTAIKGG 134
FlgB TIGR01396
flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components ...
 5-132 2.23e-40

flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components of bacterial flagella that share a domain described by pfam00460. FlgB is part of the basal body. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 273598 [Multi-domain]  Cd Length: 131  Bit Score: 131.36  E-value: 2.23e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602    5 FDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLAAQNSKNQGGFGVAVTSN---KHIAAQGMEIADPG 81
Cdd:TIGR01396   1 FSNAFGLLQQALDVRSLRQEVIANNIANVDTPGYKAKDVSFEAELKKALDNERNSKLTLARTDtrpRHLNAQDSNSVEPS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 518172602   82 LRFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALR 132
Cdd:TIGR01396  81 LQYDYTTQVKNDGNNVDIDQEMAELAQNQMHYQALTQFLNGKIKGLNYVLR 131
flgB PRK12685
flagellar basal body rod protein FlgB; Reviewed
 1-134 1.09e-36

flagellar basal body rod protein FlgB; Reviewed


Pssm-ID: 183682  Cd Length: 116  Bit Score: 121.45  E-value: 1.09e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   1 MSINFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLAAQNSknqggfgvAVTSNKHIAAQgmeiadp 80
Cdd:PRK12685   1 MAINLDAALGVHPQTLDFRVERSKVLASNLANAETPGYKARDLDFKAVMSQINA--------GMVPNQQYEAQ------- 65

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 518172602  81 glrFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALRGE 134
Cdd:PRK12685  66 ---YRVPYQNSADGNTVELGKEQARYSQNAMDYQTSLTFLNMKISGLKSAIEGR 116
 
Name Accession Description Interval E-value
FlgB COG1815
Flagellar basal body rod protein FlgB [Cell motility];
1-134 1.76e-54

Flagellar basal body rod protein FlgB [Cell motility];


Pssm-ID: 441420  Cd Length: 135  Bit Score: 167.00  E-value: 1.76e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   1 MSINFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLAAQNSKNQGGFGVAVTSNKHIAAQGMEIADP 80
Cdd:COG1815    1 MSILFDKTFGLLEKALDLRSLRQEVIASNIANADTPGYKARDVDFEAALKAALGGGSAGLALATTNPRHIPGSAGSSVSP 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 518172602  81 GLRFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALRGE 134
Cdd:COG1815   81 EVLYRTPTQPSLDGNTVDLDEEMAKLAENALQYQAALTFLNKKFSMLKTAIKGG 134
FlgB TIGR01396
flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components ...
 5-132 2.23e-40

flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components of bacterial flagella that share a domain described by pfam00460. FlgB is part of the basal body. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 273598 [Multi-domain]  Cd Length: 131  Bit Score: 131.36  E-value: 2.23e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602    5 FDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLAAQNSKNQGGFGVAVTSN---KHIAAQGMEIADPG 81
Cdd:TIGR01396   1 FSNAFGLLQQALDVRSLRQEVIANNIANVDTPGYKAKDVSFEAELKKALDNERNSKLTLARTDtrpRHLNAQDSNSVEPS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 518172602   82 LRFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALR 132
Cdd:TIGR01396  81 LQYDYTTQVKNDGNNVDIDQEMAELAQNQMHYQALTQFLNGKIKGLNYVLR 131
flgB PRK12685
flagellar basal body rod protein FlgB; Reviewed
 1-134 1.09e-36

flagellar basal body rod protein FlgB; Reviewed


Pssm-ID: 183682  Cd Length: 116  Bit Score: 121.45  E-value: 1.09e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   1 MSINFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLAAQNSknqggfgvAVTSNKHIAAQgmeiadp 80
Cdd:PRK12685   1 MAINLDAALGVHPQTLDFRVERSKVLASNLANAETPGYKARDLDFKAVMSQINA--------GMVPNQQYEAQ------- 65

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 518172602  81 glrFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALRGE 134
Cdd:PRK12685  66 ---YRVPYQNSADGNTVELGKEQARYSQNAMDYQTSLTFLNMKISGLKSAIEGR 116
flgB PRK12619
flagellar basal body rod protein FlgB; Provisional
 1-134 1.82e-31

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183627  Cd Length: 130  Bit Score: 108.72  E-value: 1.82e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   1 MSINFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLAAQNSKNQGgfGVAVTSNKHIAAQGMEIADp 80
Cdd:PRK12619   1 MAINLDSYFGIHAKALIARDQRASVLANNIANVNTPNFKARDVDFNEVLTATMAGNSQ--QLRVTSDQHISTNADFMTH- 77

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 518172602  81 gLRFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALRGE 134
Cdd:PRK12619  78 -LKYRMTHHASLDGNTVDKDMETTEFARNALNYQASLSFLNGKIKSMLTALKGE 130
flgB PRK12620
flagellar basal body rod protein FlgB; Provisional
 1-134 6.07e-30

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183628  Cd Length: 132  Bit Score: 104.71  E-value: 6.07e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   1 MSINFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLAAQNSKNQGGFgVAVTSNKHIAAQGMEIaDP 80
Cdd:PRK12620   1 MSSPFTSFLGVHGDALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGL-MQTTDAKHYEVGGGGL-NP 78

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 518172602  81 GLRFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALRGE 134
Cdd:PRK12620  79 FQITRESDQPSLDGNTVDPDAERAAYGRAALEYRASLSFLESKVRSMLTAITGQ 132
flgB PRK07182
flagellar basal body rod protein FlgB; Reviewed
 1-134 7.12e-30

flagellar basal body rod protein FlgB; Reviewed


Pssm-ID: 75964 [Multi-domain]  Cd Length: 148  Bit Score: 105.35  E-value: 7.12e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   1 MSINFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSS----------VLAAQNSKNQGGFGVAVTSNKHI 70
Cdd:PRK07182   1 MGIHFQKALGVHPMAMQLRLTRAELLSANLANVNTPNFQAKDIDFAAemqrakrgngVMAAPDRSSAQMLSTQMSSAQMS 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 518172602  71 AAQGME----IADPGLRFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALRGE 134
Cdd:PRK07182  81 SPQMMSspqiMSSPQIKYRLPYQPSLDGNTVALNVEQAEFSKNALDYQTSLSFLNMKLTGLKQAIEGK 148
flgB PRK12626
flagellar basal body rod protein FlgB; Provisional
 1-131 1.44e-22

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183632  Cd Length: 162  Bit Score: 86.91  E-value: 1.44e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   1 MSINFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLA--------------------AQNSKNQGGF 60
Cdd:PRK12626   1 MLDKLDAEFAFGRQALDVRAYRQELLSSNIANADTPGYRARDVDFASTLAralkqtdggaaasnaaqlpmAQPAGVTSGM 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 518172602  61 GVAVTSNKHIAAQGMEIADPG-------LRFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSAL 131
Cdd:PRK12626  81 SMASTAPGHMAGNVKLIPTGGpsddygrAQYRMPLQPALDGNTVDLDTERVQFADNALHYEAGMTVMTQQIKTMIAAI 158
flgB PRK12621
flagellar basal body rod protein FlgB; Provisional
 1-127 2.56e-10

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 171613  Cd Length: 136  Bit Score: 54.37  E-value: 2.56e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   1 MSINFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLaaQNSKNQGGFG-VAVTSNKHI----AAQGM 75
Cdd:PRK12621   1 MKSLFESHINLVGKVMDMQLQRQNVVMSNLANVNTPGYKPRELEFEKEL--QAALGLDAKGkMTRTEKNHLpavfDPEGF 78

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 518172602  76 EiADPGLRFRTPAHASLDQntVDAQVEQAAYAENAIDFQASFTLLNSKFRGL 127
Cdd:PRK12621  79 E-PEWSKAFKPRVVHGEDR--VDLDKEMAKMAKNTLQYNALATVIKKNFEGL 127
flgB PRK06003
flagellar basal body rod protein FlgB; Reviewed
 22-133 3.09e-10

flagellar basal body rod protein FlgB; Reviewed


Pssm-ID: 168340  Cd Length: 126  Bit Score: 53.86  E-value: 3.09e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602  22 RAEVLANNIANADTPNYKARDLD-FSSVLAAQnsknqgGFGVAVTSNKHIAAQGMEIAdpglRFRTPAHASLDQ----NT 96
Cdd:PRK06003  20 RQATVAGNIANANTPGYRARDVQpFADVLDKT------GLTMAATSPGHLGASATGID----VTEARPDDSWEVthsgNS 89

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 518172602  97 VDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALRG 133
Cdd:PRK06003  90 VSLEQEMMKAGEIKRQYSLNTAIVKSFHRMMLMTVKG 126
flgB PRK06004
flagellar basal body rod protein FlgB; Reviewed
 16-132 3.57e-10

flagellar basal body rod protein FlgB; Reviewed


Pssm-ID: 235667  Cd Length: 127  Bit Score: 53.94  E-value: 3.57e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602  16 LGFRAQRAEVLANNIANADTPNYKARDL---DFSSVLAAQ-NSKNQGGFGVAVTSNKHIAAQGmeiadPGLRFRTPAHAS 91
Cdd:PRK06004   6 MQWHQERQKVLAENVANADTPGFRPRDLvepKFDASGQAQaAGASTGGLGMMRTSASHMAPAG-----ASPSFDARRGAG 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 518172602  92 ----LDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALR 132
Cdd:PRK06004  81 fetrPAGNAVNLEDEMLKVSDNQMDYAAAASLYQKSLGLLKTAIG 125
flgB PRK12623
flagellar basal body rod protein FlgB; Provisional
 14-124 1.19e-07

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183630  Cd Length: 131  Bit Score: 47.09  E-value: 1.19e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602  14 KALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLaaQNSKNQggFGVAVTSNKHIAAqGMEIADPGLRFRTPAHASLD 93
Cdd:PRK12623  18 KGLDASSYRGKVISNNIANVNTKGYKRHYVTFEENL--KNNLDN--LELKTTNEKHIND-GVEFGQIKEKVDESTSMRTD 92

                         90       100       110
                 ....*....|....*....|....*....|.
gi 518172602  94 QNTVDAQVEQAAYAENAIDFQASFTLLNSKF 124
Cdd:PRK12623  93 GNNVDIDNEMVNQAANTLMYNALITQLNNRL 123
FlgEFG_subfam TIGR03506
flagellar hook-basal body protein; This model encompasses three closely related flagellar ...
 21-74 8.63e-07

flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.


Pssm-ID: 274616 [Multi-domain]  Cd Length: 231  Bit Score: 46.09  E-value: 8.63e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 518172602   21 QRAEVLANNIANADTPNYKARDLDFSSVLAAQNSKN-QGGFGVAVTSNKHIAAQG 74
Cdd:TIGR03506  15 SALDVIANNIANANTTGFKRSRAEFQDLLSQSVSGSgQVGGGVRTSGVATDFSQG 69
FlgE COG1749
Flagellar hook protein FlgE [Cell motility];
20-74 1.54e-06

Flagellar hook protein FlgE [Cell motility];


Pssm-ID: 441355 [Multi-domain]  Cd Length: 414  Bit Score: 45.55  E-value: 1.54e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 518172602  20 AQRAEVLANNIANADTPNYKARDLDFSSVLAAQ---NSKNQGGFGVAVTSNKHIAAQG 74
Cdd:COG1749   16 STALDVIGNNIANSNTVGFKSSRAEFADLVAQSlsgANPTQVGGGVRVASVAQIFTQG 73
FlgG COG4786
Flagellar basal body rod protein FlgG [Cell motility];
15-59 8.89e-06

Flagellar basal body rod protein FlgG [Cell motility];


Pssm-ID: 443816 [Multi-domain]  Cd Length: 260  Bit Score: 43.26  E-value: 8.89e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 518172602  15 ALGFRAQ--RAEVLANNIANADTPNYKARDLDFSSVLaAQNSKNQGG 59
Cdd:COG4786    5 ASGMLAQqtRLDVISNNLANVNTTGFKRDRAVFEDLL-YQLIRRPGA 50
FlgK COG1256
Flagellar hook-associated protein FlgK [Cell motility];
20-66 1.57e-05

Flagellar hook-associated protein FlgK [Cell motility];


Pssm-ID: 440868 [Multi-domain]  Cd Length: 479  Bit Score: 42.94  E-value: 1.57e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 518172602  20 AQRA-EVLANNIANADTPNYKARDLDFSSVLAAQNSKNQGGFGVAVTS 66
Cdd:COG1256   16 AQRAlDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTGVRVTG 63
flgB PRK12627
FlgB family protein;
20-97 1.74e-05

FlgB family protein;


Pssm-ID: 237152 [Multi-domain]  Cd Length: 128  Bit Score: 41.25  E-value: 1.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602  20 AQRAEVLANNIANADTPNYKARDL-DFSSVLAaqnskNQGGFGVAVTSNKHI-AAQGMeiADPGLRFRTPAHASLDQNTV 97
Cdd:PRK12627  19 GERQAVVARNVANADTPGYRARDLaDFAESYR-----AEGTTGMRATRPGHLnGAAAG--AADPVVTDAGGPASPNGNSV 91
flgB PRK12624
flagellar basal body rod protein FlgB; Provisional
 4-132 3.79e-05

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 139107  Cd Length: 143  Bit Score: 40.82  E-value: 3.79e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172602   4 NFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVL--AAQNSKNQGGFGV--AVTSNKHI---AAQGME 76
Cdd:PRK12624   6 HFMKTQDLLERGMNNSIQKRKVISDNIANADVPHFKRSEVIFESMIkrAIESEKIEKEKEVptQISDERHIqffKPLDYR 85

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 518172602  77 IADPGLRFRTPAHASLDQNTVDAQVEQAAYAENAIDFQASFTLLNSKFRGLMSALR 132
Cdd:PRK12624  86 EVQPKTNLDYLTTMRADGNNVDVEKEVVEASNSQMQYMLMIERLNQNYRLLKQVMR 141
flgK_ends TIGR02492
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ...
 17-66 6.67e-05

flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274162 [Multi-domain]  Cd Length: 323  Bit Score: 40.79  E-value: 6.67e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 518172602   17 GFRAQRA--EVLANNIANADTPNYKARDLDFSSVLAAQNSKNQGGFGVAVTS 66
Cdd:TIGR02492   9 GLSASQIalSVTSNNIANANTPGYSRQRAVLTAVPAGGQGGKQIGTGVKVTS 60
flgE PRK05682
flagellar hook protein FlgE; Validated
 20-66 2.29e-04

flagellar hook protein FlgE; Validated


Pssm-ID: 235557 [Multi-domain]  Cd Length: 407  Bit Score: 39.43  E-value: 2.29e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 518172602  20 AQRAEVLANNIANADTPNYKARDLDFSSVLAAQ--NSKNQGGFGVAVTS 66
Cdd:PRK05682  14 SNRLDVIGNNIANANTTGFKSSRAEFADLYANSagTNPTQVGSGVKVAG 62
flgC PRK12632
flagellar basal body rod protein FlgC; Provisional
 4-48 5.42e-04

flagellar basal body rod protein FlgC; Provisional


Pssm-ID: 183637 [Multi-domain]  Cd Length: 130  Bit Score: 37.48  E-value: 5.42e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 518172602   4 NFDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSV 48
Cdd:PRK12632   3 DFSKSLSVSASGMRAQALRLRHVSENIANADTPGYRRKTVSFQEA 47
flgB PRK12622
flagellar basal body rod protein FlgB; Provisional
 5-70 5.52e-04

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183629  Cd Length: 135  Bit Score: 37.60  E-value: 5.52e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 518172602   5 FDKALGIHEKALGFRAQRAEVLANNIANADTPNYKARDLDFSSVLA-AQNSKNQGGFGVAVTSNKHI 70
Cdd:PRK12622   4 FERSVDLSHRYLDVLSLRQSVIADNIANVDTPNFKRSKVTFESELErAILNEDKNDLSLIRGNDKHL 70
flgB PRK06797
flagellar basal body rod protein FlgB; Reviewed
 24-54 7.31e-04

flagellar basal body rod protein FlgB; Reviewed


Pssm-ID: 180697  Cd Length: 135  Bit Score: 37.30  E-value: 7.31e-04
                         10        20        30
                 ....*....|....*....|....*....|.
gi 518172602  24 EVLANNIANADTPNYKARDLDFSSVLAAQNS 54
Cdd:PRK06797  20 NTVSSNIANANTPGYKAQDVTFAEQMNKSSA 50
flgC PRK05681
flagellar basal body rod protein FlgC; Reviewed
 17-66 3.91e-03

flagellar basal body rod protein FlgC; Reviewed


Pssm-ID: 235556 [Multi-domain]  Cd Length: 135  Bit Score: 35.19  E-value: 3.91e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 518172602  17 GFRAQ--RAEVLANNIANADT-------PnYKARdldfSSVLAAQNSKNQGGFGVAVTS 66
Cdd:PRK05681  13 GLSAQsqRLNVISSNIANADStaapdgdP-YRRK----QVVFAAELDPGQGTGGVKVAK 66
FlgC COG1558
Flagellar basal body rod protein FlgC [Cell motility];
17-66 6.61e-03

Flagellar basal body rod protein FlgC [Cell motility];


Pssm-ID: 441166 [Multi-domain]  Cd Length: 135  Bit Score: 34.32  E-value: 6.61e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 518172602  17 GFRAQRA--EVLANNIANADT---PN---YKARDLDFSSVLaaqNSKNQGGFGVAVTS 66
Cdd:COG1558   13 GLTAQRLrlNVIASNLANANStrtSDggpYRRKQVVFEAVL---DRAGSGAAGVRVAG 67
flgE PRK05841
flagellar hook protein FlgE; Validated
 26-67 7.87e-03

flagellar hook protein FlgE; Validated


Pssm-ID: 235620 [Multi-domain]  Cd Length: 603  Bit Score: 35.20  E-value: 7.87e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 518172602  26 LANNIANADTPNYKARDLDF----SSVLAAQNSK----NQGGFGVAVTSN 67
Cdd:PRK05841  22 LSNNIANVNTLGYRSNIPEFktlfSSHLDALNAKsvvaNDRNYGVTGSSN 71
flgF PRK12642
flagellar basal-body rod protein FlgF;
21-55 9.93e-03

flagellar basal-body rod protein FlgF;


Pssm-ID: 237153 [Multi-domain]  Cd Length: 241  Bit Score: 34.64  E-value: 9.93e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 518172602  21 QRAEVLANNIANADTPNYKARDLDFSSVLAAQNSK 55
Cdd:PRK12642  17 KRLDTIADNVANVNTVGFRATEVKFDTVVSDTASK 51
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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