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Conserved domains on  [gi|521987936|ref|WP_020499207|]
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FAD-dependent oxidoreductase [Sciscionella marina]

Protein Classification

ferredoxin--NADP reductase domain-containing protein( domain architecture ID 1000996)

ferredoxin--NADP reductase domain-containing protein may serve as an electron transfer protein and supply electrons to P450 systems

CATH:  3.40.50.720|3.50.50.60
EC:  1.18.1.-
Gene Ontology:  GO:0004324|GO:0050661|GO:0071949
PubMed:  10998235
SCOP:  4000129

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02852 super family cl30539
ferredoxin-NADP+ reductase
 1-439 6.62e-140

ferredoxin-NADP+ reductase


The actual alignment was detected with superfamily member PLN02852:

Pssm-ID: 357415  Cd Length: 491  Bit Score: 409.86  E-value: 6.62e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   1 MHVAVVGAGPAGLYSAADLVRRSD-AVVDIIDRVPAPYGLVRYGVAPDHPRIKGVVKNLQRILERDRVRFIGNVEFGRDI 79
Cdd:PLN02852  27 LHVCVVGSGPAGFYTADKLLKAHDgARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRVSFFGNVTLGRDV 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  80 DRAFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSWYNGHPDAKDRFV-LEEPAAAVV-GAGNVALDVARILT 157
Cdd:PLN02852 107 SLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPdLKSSDTAVVlGQGNVALDCARILL 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 158 QSVGSLTLTDIPPSVLESIATSRIRDVHVVCRRGAAEAKFTTKELLDLRDLRDVGVVVDPADLEDirvEDLDRAALAN-- 235
Cdd:PLN02852 187 RPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTL---SPEDEEELKAsr 263

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 236 -----IELF-QAWAADRAAQQGERKRIHFRFWARPEAI----TGSGRVQALRIERTEVADDTLR------GTGDFYTLPV 299
Cdd:PLN02852 264 pkrrvYELLsKAAAAGKCAPSGGQRELHFVFFRNPTRFldsgDGNGHVAGVKLERTVLEGAAGSgkqvavGTGEFEDLPC 343

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 300 GMVLSSVGYRSTPLPGLPFEPERGILPNIAGRVVNEHGH--HIPSLYVTGWLKRGPHGVIGTNRTDAAETVTAVLEDLTD 377
Cdd:PLN02852 344 GLVLKSIGYKSLPVDGLPFDHKRGVVPNVHGRVLSSASGadTEPGLYVVGWLKRGPTGIIGTNLTCAEETVASIAEDLEQ 423

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 521987936 378 ---PTTRTDVANGTDAVGDRLRGLGVEVVDYDGWQRIDDQEQRRGQELGRDRVKITEWAELRAIG 439
Cdd:PLN02852 424 grlRGVASPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEMLKAA 488
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
 1-439 6.62e-140

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 409.86  E-value: 6.62e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   1 MHVAVVGAGPAGLYSAADLVRRSD-AVVDIIDRVPAPYGLVRYGVAPDHPRIKGVVKNLQRILERDRVRFIGNVEFGRDI 79
Cdd:PLN02852  27 LHVCVVGSGPAGFYTADKLLKAHDgARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRVSFFGNVTLGRDV 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  80 DRAFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSWYNGHPDAKDRFV-LEEPAAAVV-GAGNVALDVARILT 157
Cdd:PLN02852 107 SLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPdLKSSDTAVVlGQGNVALDCARILL 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 158 QSVGSLTLTDIPPSVLESIATSRIRDVHVVCRRGAAEAKFTTKELLDLRDLRDVGVVVDPADLEDirvEDLDRAALAN-- 235
Cdd:PLN02852 187 RPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTL---SPEDEEELKAsr 263

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 236 -----IELF-QAWAADRAAQQGERKRIHFRFWARPEAI----TGSGRVQALRIERTEVADDTLR------GTGDFYTLPV 299
Cdd:PLN02852 264 pkrrvYELLsKAAAAGKCAPSGGQRELHFVFFRNPTRFldsgDGNGHVAGVKLERTVLEGAAGSgkqvavGTGEFEDLPC 343

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 300 GMVLSSVGYRSTPLPGLPFEPERGILPNIAGRVVNEHGH--HIPSLYVTGWLKRGPHGVIGTNRTDAAETVTAVLEDLTD 377
Cdd:PLN02852 344 GLVLKSIGYKSLPVDGLPFDHKRGVVPNVHGRVLSSASGadTEPGLYVVGWLKRGPTGIIGTNLTCAEETVASIAEDLEQ 423

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 521987936 378 ---PTTRTDVANGTDAVGDRLRGLGVEVVDYDGWQRIDDQEQRRGQELGRDRVKITEWAELRAIG 439
Cdd:PLN02852 424 grlRGVASPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEMLKAA 488
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 2-357 1.34e-38

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 144.89  E-value: 1.34e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   2 HVAVVGAGPAGLYSAADLVRRSDAVVdIIDRVPAPYGLVRYGVaPDHPRIKGVVKNLQRILERDRVRFIGNVEFGRDIDR 81
Cdd:COG0493  123 KVAVVGSGPAGLAAAYQLARAGHEVT-VFEALDKPGGLLRYGI-PEFRLPKDVLDREIELIEALGVEFRTNVEVGKDITL 200

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  82 AFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSWYNGH-----PDAKDRFVleepaaAVVGAGNVALDVARil 156
Cdd:COG0493  201 DELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLTAVNLGeapdtILAVGKRV------VVIGGGNTAMDCAR-- 272

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 157 tqsvgsltltdippsvlesiaTSrIR----DVHVVCRRGAAEAKFTTKElldlrdlrdvgvvVDPADLEDIRvedldraa 232
Cdd:COG0493  273 ---------------------TA-LRlgaeSVTIVYRRTREEMPASKEE-------------VEEALEEGVE-------- 309

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 233 lanielfqawaadraaqqgerkrihFRFWARPEAITGS--GRVQALRIERTE--VADDTLR-----GTGDFYTLPVGMVL 303
Cdd:COG0493  310 -------------------------FLFLVAPVEIIGDenGRVTGLECVRMElgEPDESGRrrpvpIEGSEFTLPADLVI 364

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 521987936 304 SSVGYRSTPlpgLPFEPERGILPNIAGRVVNEHGHH---IPSLYVTGWLKRGPHGVI 357
Cdd:COG0493  365 LAIGQTPDP---SGLEEELGLELDKRGTIVVDEETYqtsLPGVFAGGDAVRGPSLVV 418
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 1-185 3.97e-07

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 51.55  E-value: 3.97e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936    1 MHVAVVGAGPAGLYSAADLVRRSDAVVDIIDRVPAPYG------LVRYGVAPDHP---------RIKGVVK----NLQRI 61
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGTCPYGgcvlskALLGAAEAPEIaslwadlykRKEEVVKklnnGIEVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   62 LERDRVRFI---GNVEFGRDIDRAFLNTYYDATIYATGAlHSKPLGIEGEHLSGSCSASNFvswynghpDAKDRFVLEEP 138
Cdd:pfam07992  81 LGTEVVSIDpgaKKVVLEELVDGDGETITYDRLVIATGA-RPRLPPIPGVELNVGFLVRTL--------DSAEALRLKLL 151

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 521987936  139 A--AAVVGAGNVALDVARILTQSVGSLTL---TDIPPSVLESIATSRIRDVH 185
Cdd:pfam07992 152 PkrVVVVGGGYIGVELAAALAKLGKEVTLieaLDRLLRAFDEEISAALEKAL 203
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
 1-439 6.62e-140

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 409.86  E-value: 6.62e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   1 MHVAVVGAGPAGLYSAADLVRRSD-AVVDIIDRVPAPYGLVRYGVAPDHPRIKGVVKNLQRILERDRVRFIGNVEFGRDI 79
Cdd:PLN02852  27 LHVCVVGSGPAGFYTADKLLKAHDgARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRVSFFGNVTLGRDV 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  80 DRAFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSWYNGHPDAKDRFV-LEEPAAAVV-GAGNVALDVARILT 157
Cdd:PLN02852 107 SLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPdLKSSDTAVVlGQGNVALDCARILL 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 158 QSVGSLTLTDIPPSVLESIATSRIRDVHVVCRRGAAEAKFTTKELLDLRDLRDVGVVVDPADLEDirvEDLDRAALAN-- 235
Cdd:PLN02852 187 RPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTL---SPEDEEELKAsr 263

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 236 -----IELF-QAWAADRAAQQGERKRIHFRFWARPEAI----TGSGRVQALRIERTEVADDTLR------GTGDFYTLPV 299
Cdd:PLN02852 264 pkrrvYELLsKAAAAGKCAPSGGQRELHFVFFRNPTRFldsgDGNGHVAGVKLERTVLEGAAGSgkqvavGTGEFEDLPC 343

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 300 GMVLSSVGYRSTPLPGLPFEPERGILPNIAGRVVNEHGH--HIPSLYVTGWLKRGPHGVIGTNRTDAAETVTAVLEDLTD 377
Cdd:PLN02852 344 GLVLKSIGYKSLPVDGLPFDHKRGVVPNVHGRVLSSASGadTEPGLYVVGWLKRGPTGIIGTNLTCAEETVASIAEDLEQ 423

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 521987936 378 ---PTTRTDVANGTDAVGDRLRGLGVEVVDYDGWQRIDDQEQRRGQELGRDRVKITEWAELRAIG 439
Cdd:PLN02852 424 grlRGVASPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEMLKAA 488
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 2-357 1.34e-38

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 144.89  E-value: 1.34e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   2 HVAVVGAGPAGLYSAADLVRRSDAVVdIIDRVPAPYGLVRYGVaPDHPRIKGVVKNLQRILERDRVRFIGNVEFGRDIDR 81
Cdd:COG0493  123 KVAVVGSGPAGLAAAYQLARAGHEVT-VFEALDKPGGLLRYGI-PEFRLPKDVLDREIELIEALGVEFRTNVEVGKDITL 200

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  82 AFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSWYNGH-----PDAKDRFVleepaaAVVGAGNVALDVARil 156
Cdd:COG0493  201 DELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLTAVNLGeapdtILAVGKRV------VVIGGGNTAMDCAR-- 272

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 157 tqsvgsltltdippsvlesiaTSrIR----DVHVVCRRGAAEAKFTTKElldlrdlrdvgvvVDPADLEDIRvedldraa 232
Cdd:COG0493  273 ---------------------TA-LRlgaeSVTIVYRRTREEMPASKEE-------------VEEALEEGVE-------- 309

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 233 lanielfqawaadraaqqgerkrihFRFWARPEAITGS--GRVQALRIERTE--VADDTLR-----GTGDFYTLPVGMVL 303
Cdd:COG0493  310 -------------------------FLFLVAPVEIIGDenGRVTGLECVRMElgEPDESGRrrpvpIEGSEFTLPADLVI 364

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 521987936 304 SSVGYRSTPlpgLPFEPERGILPNIAGRVVNEHGHH---IPSLYVTGWLKRGPHGVI 357
Cdd:COG0493  365 LAIGQTPDP---SGLEEELGLELDKRGTIVVDEETYqtsLPGVFAGGDAVRGPSLVV 418
PTZ00188 PTZ00188
adrenodoxin reductase; Provisional
 3-216 7.58e-36

adrenodoxin reductase; Provisional


Pssm-ID: 240308  Cd Length: 506  Bit Score: 138.48  E-value: 7.58e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   3 VAVVGAGPAGLYSAADLVRRSDAVVDIIDRVPAPYGLVRYGVAPDHPRIKGVVKNLQRILERDRVRFIGNVEFGRDIDRA 82
Cdd:PTZ00188  42 VGIIGAGPSALYCCKHLLKHERVKVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPVFLSPNYRFFGNVHVGVDLKME 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  83 FLNTYYDATIYATGALHSK-PLGIEGEHL------------SGSCSASNFVSWYNG-HPDAKDRFV------LEE-PAAA 141
Cdd:PTZ00188 122 ELRNHYNCVIFCCGASEVSiPIGQQDEDKavsggetnprkqNGIFHARDLIYFYNNmYNDVRCKAVdnylnsFENfTTSI 201

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 521987936 142 VVGAGNVALDVARILTQSVGSLTLTDIPPSVLESIATSRIRDVHVVCRRGAAEAKFTTKELLDLRDLRDVGVVVD 216
Cdd:PTZ00188 202 IIGNGNVSLDIARILIKSPDDLSKTDISSDYLKVIKRHNIKHIYIVGRRGFWQSSFTNAELRELISLENTKVILS 276
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 1-338 1.05e-25

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 108.73  E-value: 1.05e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   1 MHVAVVGAGPAGLYSAADLVRRSDAVVdIIDRVPAPYGLVRYGVA----PdhpriKGVVKNLQRILERDRVRFIGNVEFG 76
Cdd:PRK11749 141 KKVAVIGAGPAGLTAAHRLARKGYDVT-IFEARDKAGGLLRYGIPefrlP-----KDIVDREVERLLKLGVEIRTNTEVG 214

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  77 RDIDRAFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSA------SNFVSWYNGHPDAKDrfvleepaAAVVGAGNVAL 150
Cdd:PRK11749 215 RDITLDELRAGYDAVFIGTGAGLPRFLGIPGENLGGVYSAvdfltrVNQAVADYDLPVGKR--------VVVIGGGNTAM 286

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 151 DVARiltqsvgsltltdippsvlesiaTSRI---RDVHVVCRRGAAEAkfttkelldlrdlrdvgvvvdPADLEDIrved 227
Cdd:PRK11749 287 DAAR-----------------------TAKRlgaESVTIVYRRGREEM---------------------PASEEEV---- 318

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 228 ldraalanielfqawaaDRAAQQGerkrIHFRFWARPEAITGSG-RVQALRIERTEVADDTLRGT------GDFYTLPVG 300
Cdd:PRK11749 319 -----------------EHAKEEG----VEFEWLAAPVEILGDEgRVTGVEFVRMELGEPDASGRrrvpieGSEFTLPAD 377

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 521987936 301 MVLSSVGYRSTPL-----PGLPFEPERGIlpniagRVVNEHGH 338
Cdd:PRK11749 378 LVIKAIGQTPNPLilsttPGLELNRWGTI------IADDETGR 414
PRK12831 PRK12831
putative oxidoreductase; Provisional
 3-316 1.45e-20

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 93.93  E-value: 1.45e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   3 VAVVGAGPAGLYSAADLVRRSdAVVDIIDRVPAPYGLVRYGVaPDH--PRiKGVVKNLQRILERDRVRFIGNVEFGR--D 78
Cdd:PRK12831 143 VAVIGSGPAGLTCAGDLAKMG-YDVTIFEALHEPGGVLVYGI-PEFrlPK-ETVVKKEIENIKKLGVKIETNVVVGKtvT 219

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  79 IDRAFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSWYNGHPDAKDRFvlEEPAA-----AVVGAGNVALDVA 153
Cdd:PRK12831 220 IDELLEEEGFDAVFIGSGAGLPKFMGIPGENLNGVFSANEFLTRVNLMKAYKPEY--DTPIKvgkkvAVVGGGNVAMDAA 297

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 154 RiltqsvgsltltdippsvlesiatSRIR---DVHVVCRRGAAEAkfttkelldlrdlrdvgvvvdPADLEDIRvedldr 230
Cdd:PRK12831 298 R------------------------TALRlgaEVHIVYRRSEEEL---------------------PARVEEVH------ 326

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 231 aalanielfqawaadRAAQQGerkrIHFRFWARPEAITG--SGRVQALRIERTEVADDTLRG-------TGDFYTLPVGM 301
Cdd:PRK12831 327 ---------------HAKEEG----VIFDLLTNPVEILGdeNGWVKGMKCIKMELGEPDASGrrrpveiEGSEFVLEVDT 387

                        330       340
                 ....*....|....*....|
gi 521987936 302 VLSSVGYRSTPL-----PGL 316
Cdd:PRK12831 388 VIMSLGTSPNPLissttKGL 407
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
 2-154 1.66e-18

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 88.25  E-value: 1.66e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   2 HVAVVGAGPAGLySAADLVRRSDAVVDIIDRVPAPYGLVRYGVapdhPRIK---GVVKNLQRILERDRVRFIGNVEFGRD 78
Cdd:PRK12814 195 KVAIIGAGPAGL-TAAYYLLRKGHDVTIFDANEQAGGMMRYGI----PRFRlpeSVIDADIAPLRAMGAEFRFNTVFGRD 269

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 521987936  79 IDRAFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVswyngHPDAKDRFVLEEPAAAVVGAGNVALDVAR 154
Cdd:PRK12814 270 ITLEELQKEFDAVLLAVGAQKASKMGIPGEELPGVISGIDFL-----RNVALGTALHPGKKVVVIGGGNTAIDAAR 340
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
 3-353 1.70e-18

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 86.58  E-value: 1.70e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   3 VAVVGAGPAGLYSAADLVRRSDAVvDIIDRVPAPYGLVRYGVAPDHPRIKGVVKNLqRILERDRVRFIGNV--------- 73
Cdd:PRK12770  21 VAIIGAGPAGLAAAGYLACLGYEV-HVYDKLPEPGGLMLFGIPEFRIPIERVREGV-KELEEAGVVFHTRTkvccgeplh 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  74 -----EF-GRDIDRAFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSWYNGH----------PDAKDRFVLee 137
Cdd:PRK12770  99 eeegdEFvERIVSLEELVKKYDAVLIATGTWKSRKLGIPGEDLPGVYSALEYLFRIRAAklgylpwekvPPVEGKKVV-- 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 138 paaaVVGAGNVALDVARiltqsvgsltltdipPSVLEsiatsRIRDVHVVCRRGAAEAKFTTKElldLRDLRDVGVVVdp 217
Cdd:PRK12770 177 ----VVGAGLTAVDAAL---------------EAVLL-----GAEKVYLAYRRTINEAPAGKYE---IERLIARGVEF-- 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 218 adledirvedldraalanIELfqawaadraaqqgerkrihfrfwARPEAITGSGRVQALRIERTEV--ADDTLRG----- 290
Cdd:PRK12770 228 ------------------LEL-----------------------VTPVRIIGEGRVEGVELAKMRLgePDESGRPrpvpi 266

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 521987936 291 TGDFYTLPVGMVLSSVGYRSTPlpglPFEPER-GILPNIAGRVV--NEHGHHIPSLYVTGWLKRGP 353
Cdd:PRK12770 267 PGSEFVLEADTVVFAIGEIPTP----PFAKEClGIELNRKGEIVvdEKHMTSREGVFAAGDVVTGP 328
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 3-112 1.51e-16

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 81.36  E-value: 1.51e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   3 VAVVGAGPAGLySAAD-LVRRSDAVVdIIDRVPAPYGLVRYGVaPDHPRIKGVVKNLQRILERDRVRFIGNVEFGRDIDR 81
Cdd:PRK12810 146 VAVVGSGPAGL-AAADqLARAGHKVT-VFERADRIGGLLRYGI-PDFKLEKEVIDRRIELMEAEGIEFRTNVEVGKDITA 222

                         90       100       110
                 ....*....|....*....|....*....|.
gi 521987936  82 AFLNTYYDATIYATGALHSKPLGIEGEHLSG 112
Cdd:PRK12810 223 EELLAEYDAVFLGTGAYKPRDLGIPGRDLDG 253
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 2-154 5.51e-16

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 80.30  E-value: 5.51e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   2 HVAVVGAGPAGLYSAADLVRRSDAvVDIIDRVPAPYGLVRYGVaPDH--PRikGVVKN-LQRILERDrVRFIGNVEFGRD 78
Cdd:PRK12771 139 RVAVIGGGPAGLSAAYHLRRMGHA-VTIFEAGPKLGGMMRYGI-PAYrlPR--EVLDAeIQRILDLG-VEVRLGVRVGED 213

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 521987936  79 IDRAFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSWYN-GHPDAKDRFVleepaaAVVGAGNVALDVAR 154
Cdd:PRK12771 214 ITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVGeGEPPFLGKRV------VVIGGGNTAMDAAR 284
PRK12775 PRK12775
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ...
 3-385 1.54e-15

putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional


Pssm-ID: 183738 [Multi-domain]  Cd Length: 1006  Bit Score: 79.21  E-value: 1.54e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936    3 VAVVGAGPAGLYSAADLVRRSdAVVDIIDRVPAPYGLVRYGVAPDH-PRiKGVVKNLQRILERDrVRFIGNVEFGR--DI 79
Cdd:PRK12775  433 VAICGSGPAGLAAAADLVKYG-VDVTVYEALHVVGGVLQYGIPSFRlPR-DIIDREVQRLVDIG-VKIETNKVIGKtfTV 509

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   80 DRAFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSWYNGHpdAKDRF-VLEEP-----AAAVVGAGNVALDVA 153
Cdd:PRK12775  510 PQLMNDKGFDAVFLGVGAGAPTFLGIPGEFAGQVYSANEFLTRVNLM--GGDKFpFLDTPislgkSVVVIGAGNTAMDCL 587

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  154 RIlTQSVGSLTltdippsvlesiatsrirdVHVVCRRGAAEAkfttkelldlrdlrdvgvvvdPADLEDIRvedldraal 233
Cdd:PRK12775  588 RV-AKRLGAPT-------------------VRCVYRRSEAEA---------------------PARIEEIR--------- 617

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  234 anielfqawaadRAAQQGerkrIHFRFWARPEAI--TGSGRVQALRIERTEVADDTLRG------TGDFYTLPVGMVLSS 305
Cdd:PRK12775  618 ------------HAKEEG----IDFFFLHSPVEIyvDAEGSVRGMKVEEMELGEPDEKGrrkpmpTGEFKDLECDTVIYA 681

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  306 VGYRSTPL-----PGLPFEPergiLPNIA---GRVVNEHGHHIPSLYVTGWLKRGPHGVI---GTNRTDAAETVTAVLED 374
Cdd:PRK12775  682 LGTKANPIitqstPGLALNK----WGNIAaddGKLESTQSTNLPGVFAGGDIVTGGATVIlamGAGRRAARSIATYLRLG 757

                         410
                  ....*....|.
gi 521987936  375 LTDPTTRTDVA 385
Cdd:PRK12775  758 KKWPITAEEAA 768
PRK12809 PRK12809
putative oxidoreductase Fe-S binding subunit; Reviewed
 3-154 1.46e-13

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183762 [Multi-domain]  Cd Length: 639  Bit Score: 72.75  E-value: 1.46e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   3 VAVVGAGPAGLySAADLVRRSDAVVDIIDRVPAPYGLVRYGVAPdHPRIKGVVKNLQRILERDRVRFIGNVEFGRDIDRA 82
Cdd:PRK12809 313 VAVIGAGPAGL-GCADILARAGVQVDVFDRHPEIGGMLTFGIPP-FKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFS 390

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  83 FLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSwynghPDAKDRFVLEEPA-----------AAVVGAGNVALD 151
Cdd:PRK12809 391 DLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLT-----AHTRQLMGLPESEeypltdvegkrVVVLGGGDTTMD 465


                 ...
gi 521987936 152 VAR 154
Cdd:PRK12809 466 CLR 468
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
 1-357 3.04e-12

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 68.62  E-value: 3.04e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   1 MHVAVVGAGPAGLYSAADLVRRSDAVVdIIDRVPAPYGLVRYGVaPDHPRIKGVVKNLQRILERDRVRFIGNVEFGRDID 80
Cdd:PRK12778 432 KKVAVIGSGPAGLSFAGDLAKRGYDVT-VFEALHEIGGVLKYGI-PEFRLPKKIVDVEIENLKKLGVKFETDVIVGKTIT 509

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  81 RAFLNT-YYDATIYATGALHSKPLGIEGEHLSGSCSASNF---VSWYNGHPDAKDRFVLEEPAAAVVGAGNVALDVARIl 156
Cdd:PRK12778 510 IEELEEeGFKGIFIASGAGLPNFMNIPGENSNGVMSSNEYltrVNLMDAASPDSDTPIKFGKKVAVVGGGNTAMDSART- 588

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 157 TQSVGSLTltdippsvlesiatsrirdVHVVCRRGAAEAkfttkelldlrdlrdvgvvvdPADLEDIRvedldraalani 236
Cdd:PRK12778 589 AKRLGAER-------------------VTIVYRRSEEEM---------------------PARLEEVK------------ 616

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 237 elfqawaadRAAQQGerkrIHFRFWARPEAITG--SGRVQALRIERTEVADDTLRG-------TGDFYTLPVGMVLSSVG 307
Cdd:PRK12778 617 ---------HAKEEG----IEFLTLHNPIEYLAdeKGWVKQVVLQKMELGEPDASGrrrpvaiPGSTFTVDVDLVIVSVG 683

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 521987936 308 YRSTPL-----PGLpfepERGILPNIagrVVNEHGH-HIPSLYVTGWLKRGPHGVI 357
Cdd:PRK12778 684 VSPNPLvpssiPGL----ELNRKGTI---VVDEEMQsSIPGIYAGGDIVRGGATVI 732
PRK13984 PRK13984
putative oxidoreductase; Provisional
 3-356 1.91e-10

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 62.86  E-value: 1.91e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   3 VAVVGAGPAGLYSAADLVRRSDAvVDIIDRVPAPYGLVRYGVA----PDHPRIKGVvknlqRILERDRVRFIGNVEFGRD 78
Cdd:PRK13984 286 VAIVGSGPAGLSAAYFLATMGYE-VTVYESLSKPGGVMRYGIPsyrlPDEALDKDI-----AFIEALGVKIHLNTRVGKD 359

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  79 IDRAFLNTYYDATIYATGALHSKPLGIEGEHlsgscsasnfvswyngHPDAKDRFVL------------EEPAAA----V 142
Cdd:PRK13984 360 IPLEELREKHDAVFLSTGFTLGRSTRIPGTD----------------HPDVIQALPLlreirdylrgegPKPKIPrslvV 423

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 143 VGAGNVALDVARILTQsvgsltltdippsvLESIATSRIrDVHVVCRRGAAEAKfttkelldlrdlrdvgvvvdPADLED 222
Cdd:PRK13984 424 IGGGNVAMDIARSMAR--------------LQKMEYGEV-NVKVTSLERTFEEM--------------------PADMEE 468

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 223 IRvedldRAALANIELFQAWAADraaqqgerkrihfrfwarpEAITGSGRVQALRIER-TEVADDTLRGTGDF-----YT 296
Cdd:PRK13984 469 IE-----EGLEEGVVIYPGWGPM-------------------EVVIENDKVKGVKFKKcVEVFDEEGRFNPKFdesdqII 524

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 521987936 297 LPVGMVLSSVGyrstPLPGLPFEPE--RGILPNIAGRV-VNEHGH-HIPSLYVTGWLKRGP---HGV 356
Cdd:PRK13984 525 VEADMVVEAIG----QAPDYSYLPEelKSKLEFVRGRIlTNEYGQtSIPWLFAGGDIVHGPdiiHGV 587
PRK12769 PRK12769
putative oxidoreductase Fe-S binding subunit; Reviewed
 2-154 2.55e-08

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183733 [Multi-domain]  Cd Length: 654  Bit Score: 56.29  E-value: 2.55e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   2 HVAVVGAGPAGLySAADLVRRSDAVVDIIDRVPAPYGLVRYGVaPDHPRIKGVVKNLQRILERDRVRFIGNVEFGRDIDR 81
Cdd:PRK12769 329 RVAIIGAGPAGL-ACADVLARNGVAVTVYDRHPEIGGLLTFGI-PAFKLDKSLLARRREIFSAMGIEFELNCEVGKDISL 406

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  82 AFLNTYYDATIYATGALHSKPLGIEGEHLSGSCSASNFVSwynghpdAKDRFVLEEPAAA-------------VVGAGNV 148
Cdd:PRK12769 407 ESLLEDYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLI-------ANTKQVMGLEELPeepfintaglnvvVLGGGDT 479


                 ....*.
gi 521987936 149 ALDVAR 154
Cdd:PRK12769 480 AMDCVR 485
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 1-185 3.97e-07

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 51.55  E-value: 3.97e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936    1 MHVAVVGAGPAGLYSAADLVRRSDAVVDIIDRVPAPYG------LVRYGVAPDHP---------RIKGVVK----NLQRI 61
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGTCPYGgcvlskALLGAAEAPEIaslwadlykRKEEVVKklnnGIEVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   62 LERDRVRFI---GNVEFGRDIDRAFLNTYYDATIYATGAlHSKPLGIEGEHLSGSCSASNFvswynghpDAKDRFVLEEP 138
Cdd:pfam07992  81 LGTEVVSIDpgaKKVVLEELVDGDGETITYDRLVIATGA-RPRLPPIPGVELNVGFLVRTL--------DSAEALRLKLL 151

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 521987936  139 A--AAVVGAGNVALDVARILTQSVGSLTL---TDIPPSVLESIATSRIRDVH 185
Cdd:pfam07992 152 PkrVVVVGGGYIGVELAAALAKLGKEVTLieaLDRLLRAFDEEISAALEKAL 203
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
3-319 9.82e-07

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 50.12  E-value: 9.82e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   3 VAVVGAGPAGLYSAADLVRRSDAVVdIIDRvPAPYGLVR-----YGVAPDHPRIKGV--VKNLQRILERDRVRFIG---- 71
Cdd:COG0492    3 VVIIGAGPAGLTAAIYAARAGLKTL-VIEG-GEPGGQLAttkeiENYPGFPEGISGPelAERLREQAERFGAEILLeevt 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  72 NVEFGRDIDRAFLN---TYY-DATIYATGAlHSKPLGIEGE-HLSGSCsasnfVSwYNGHPDA---KDRFVleepaaAVV 143
Cdd:COG0492   81 SVDKDDGPFRVTTDdgtEYEaKAVIIATGA-GPRKLGLPGEeEFEGRG-----VS-YCATCDGfffRGKDV------VVV 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 144 GAGNVALDVARILTQsvgsltltdippsvlesIAtsriRDVHVVCRRGAAEAkftTKELLDlrdlrdvgvvvdpadledi 223
Cdd:COG0492  148 GGGDSALEEALYLTK-----------------FA----SKVTLIHRRDELRA---SKILVE------------------- 184

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936 224 RVEDLDraalanielfqawaadraaqqgerkRIHFRFWARPEAITGSGRVQALRIERTEvaddtlrgTGDFYTLPVGMVL 303
Cdd:COG0492  185 RLRANP-------------------------KIEVLWNTEVTEIEGDGRVEGVTLKNVK--------TGEEKELEVDGVF 231

                        330
                 ....*....|....*...
gi 521987936 304 SSVGY--RSTPLPGLPFE 319
Cdd:COG0492  232 VAIGLkpNTELLKGLGLE 249
PRK12779 PRK12779
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ...
 3-165 6.49e-06

putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional


Pssm-ID: 183740 [Multi-domain]  Cd Length: 944  Bit Score: 48.67  E-value: 6.49e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   3 VAVVGAGPAGLYSAAdLVRRSDAVVDIIDRVPAPYGLVRYGVapdhPRIKGVVKNLQRILERDRV---RFIGNVEFGRDI 79
Cdd:PRK12779 309 IAVVGSGPSGLINAY-LLAVEGFPVTVFEAFHDLGGVLRYGI----PEFRLPNQLIDDVVEKIKLlggRFVKNFVVGKTA 383

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936  80 DRAFLNTYYDATIY-ATGALHSKPLGIEGEHLSGSCSASNFVSWYN---GH--------PDAKDRFVLeepaaaVVGAGN 147
Cdd:PRK12779 384 TLEDLKAAGFWKIFvGTGAGLPTFMNVPGEHLLGVMSANEFLTRVNlmrGLdddyetplPEVKGKEVF------VIGGGN 457

                        170
                 ....*....|....*...
gi 521987936 148 VALDVARILTQSVGSLTL 165
Cdd:PRK12779 458 TAMDAARTAKRLGGNVTI 475
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 1-41 7.09e-03

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 38.38  E-value: 7.09e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 521987936   1 MHVAVVGAGPAGLYSAADLVRRSDAVVdIIDRVPAPYGLVR 41
Cdd:COG0654    4 TDVLIVGGGPAGLALALALARAGIRVT-VVERAPPPRPDGR 43
Ndh COG1252
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
1-82 7.67e-03

NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];


Pssm-ID: 440864 [Multi-domain]  Cd Length: 386  Bit Score: 38.58  E-value: 7.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 521987936   1 MHVAVVGAGPAGLYSAADLVRRSDAVVDI--IDRVP----AP--YGLVRYGVAPDHprikgVVKNLQRILERDRVRFI-G 71
Cdd:COG1252    2 KRIVIVGGGFAGLEAARRLRKKLGGDAEVtlIDPNPyhlfQPllPEVAAGTLSPDD-----IAIPLRELLRRAGVRFIqG 76

                         90
                 ....*....|.
gi 521987936  72 NVEfgrDIDRA 82
Cdd:COG1252   77 EVT---GIDPE 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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