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Conserved domains on  [gi|736388501|ref|WP_034412390|]
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NADH-quinone oxidoreductase subunit A [Candidatus Entotheonella palauensis]

Protein Classification

NADH-quinone oxidoreductase subunit A( domain architecture ID 10002876)

NADH-quinone oxidoreductase subunit A (NuoA) is part of the membrane domain of complex I of the respiratory chain that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-117 8.35e-42

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


:

Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 134.09  E-value: 8.35e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   1 MFDGYYNAFWFLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPW 80
Cdd:COG0838    1 MLSDYLPILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPW 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 736388501  81 AVVLKGAGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:COG0838   81 AVVFRELGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-117 8.35e-42

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 134.09  E-value: 8.35e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   1 MFDGYYNAFWFLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPW 80
Cdd:COG0838    1 MLSDYLPILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPW 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 736388501  81 AVVLKGAGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:COG0838   81 AVVFRELGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
23-116 2.03e-38

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 124.46  E-value: 2.03e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   23 LFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLKGAGAHVLIHMMIFLAIL 102
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGFVEMLIFIAIL 80

                          90
                  ....*....|....
gi 736388501  103 AVGLVYSWGKGDLD 116
Cdd:pfam00507  81 LVGLVYAWKKGALE 94
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 11-117 7.89e-35

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 116.50  E-value: 7.89e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501  11 FLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLKGAGAH 90
Cdd:PRK06602  14 FLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWL 93

                         90       100
                 ....*....|....*....|....*..
gi 736388501  91 VLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:PRK06602  94 GFVEAMIFILVLLVGLVYLWRKGALDW 120
 
Name Accession Description Interval E-value
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-117 8.35e-42

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 134.09  E-value: 8.35e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   1 MFDGYYNAFWFLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPW 80
Cdd:COG0838    1 MLSDYLPILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPW 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 736388501  81 AVVLKGAGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:COG0838   81 AVVFRELGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
23-116 2.03e-38

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 124.46  E-value: 2.03e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   23 LFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLKGAGAHVLIHMMIFLAIL 102
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGFVEMLIFIAIL 80

                          90
                  ....*....|....
gi 736388501  103 AVGLVYSWGKGDLD 116
Cdd:pfam00507  81 LVGLVYAWKKGALE 94
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 11-117 7.89e-35

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 116.50  E-value: 7.89e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501  11 FLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLKGAGAH 90
Cdd:PRK06602  14 FLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWL 93

                         90       100
                 ....*....|....*....|....*..
gi 736388501  91 VLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:PRK06602  94 GFVEAMIFILVLLVGLVYLWRKGALDW 120
ndhC CHL00022
NADH dehydrogenase subunit 3
 6-117 6.06e-30

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 103.91  E-value: 6.06e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   6 YNAFW-FLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVL 84
Cdd:CHL00022   7 YDIFWaFLIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSF 86

                         90       100       110
                 ....*....|....*....|....*....|...
gi 736388501  85 KGAGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:CHL00022  87 DVLGVSAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
5-117 1.31e-28

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 100.59  E-value: 1.31e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   5 YYNAFWFLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVL 84
Cdd:PRK07756   9 YMIVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAY 88

                         90       100       110
                 ....*....|....*....|....*....|...
gi 736388501  85 KGAGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:PRK07756  89 DKLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 3-117 5.24e-22

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 83.95  E-value: 5.24e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   3 DGYYNAFWFLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEE--SEGTGFVRFNPRFYVIALVFLIFDIETVFIFPW 80
Cdd:PRK07928   2 NVYIPILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEptPQPAGGGRFPVKYYLTAMLFIVFDIEIVFLYPW 81

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 736388501  81 AVVLKGAGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:PRK07928  82 AVSFDALGVFGLVEMALFMLTVFVAYAYVWRRGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
5-117 4.51e-21

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 81.64  E-value: 4.51e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   5 YYNAFWFLLIGLAFVGLNLFLSSLIRPS----DPNPTKLTPYECGEESEGTGfVRFNPRFYVIALVFLIFDIETVFIFPW 80
Cdd:PRK08489  10 YFGVFVLLVLTFVAFFLTTRLARFISRKlaqkNTEKLKLAIYECGPEPVKQP-NRISSHFYIMALLFILFDVEIVFMFPW 88

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 736388501  81 AVVLKGAGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:PRK08489  89 AVDFKLLGLFGLIEMLLFIVLLTIGFIYAWKKGALEW 125
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 5-117 5.93e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 73.21  E-value: 5.93e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   5 YYNAFWFLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVL 84
Cdd:MTH00055   5 FLGIFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVY 84

                         90       100       110
                 ....*....|....*....|....*....|...
gi 736388501  85 KGAGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:MTH00055  85 NQIGLFGFWVMYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 6-117 9.92e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 72.79  E-value: 9.92e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   6 YNAFWFLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLK 85
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                         90       100       110
                 ....*....|....*....|....*....|..
gi 736388501  86 GAGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:MTH00018  81 QIAPFGFWTMVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 12-117 2.74e-15

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 66.42  E-value: 2.74e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501  12 LLIGLAFVGLNLFLSSlirPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLKGAGA-H 90
Cdd:MTH00012  12 LILPPLVLGAAWVLAA---RSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSkT 88

                         90       100
                 ....*....|....*....|....*..
gi 736388501  91 VLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:MTH00012  89 VVYTSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 9-119 4.25e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 66.03  E-value: 4.25e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   9 FWFLLIGLAFVGLNLFLSSLIRPSDPNPT-KLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLKGA 87
Cdd:MTH00148   5 LLSLLFALILSPVLLLLGLVLSKRSYSDReKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSS 84

                         90       100       110
                 ....*....|....*....|....*....|...
gi 736388501  88 GAHVLIHM-MIFLAILAVGLVYSWGKGDLDWIK 119
Cdd:MTH00148  85 FSVWSLTSlFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 6-117 7.51e-15

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 65.39  E-value: 7.51e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   6 YNAFWFLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETV--FIFPWAVV 83
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIAllFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....
gi 736388501  84 LKGaGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:MTH00042  82 ITN-PSTLLPISLIFLIILTIGLVYEWVNGGLEW 114
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 9-117 1.51e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 64.41  E-value: 1.51e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   9 FWFLLIGLAFVGLNLFLSSLIRP-SDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLK-G 86
Cdd:MTH00161   3 LIILLIILLISIILMILASLLSKkSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKtS 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 736388501  87 AGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:MTH00161  83 NMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 38-119 1.61e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 64.63  E-value: 1.61e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501  38 KLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLKGA-GAHVLIHMMIFLAILAVGLVYSWGKGDLD 116
Cdd:MTH00202  35 KSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSwSKGGLLGGTIFLLILIGGLIHEWKEGSLD 114


                 ...
gi 736388501 117 WIK 119
Cdd:MTH00202 115 WVK 117
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 9-117 3.49e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 63.38  E-value: 3.49e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   9 FWFLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLKGaG 88
Cdd:MTH00203   5 MLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQL-S 83

                         90       100
                 ....*....|....*....|....*....
gi 736388501  89 AHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:MTH00203  84 SLSLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 11-117 5.92e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 63.09  E-value: 5.92e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501  11 FLLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIF--PWAVVLKGAg 88
Cdd:MTH00069   5 MLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLptPWASQLNTP- 83

                         90       100
                 ....*....|....*....|....*....
gi 736388501  89 AHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:MTH00069  84 TNTLFWSTLILILLTLGLIYEWIQGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 5-117 2.76e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 61.49  E-value: 2.76e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501   5 YYNAFWFLLIGLAFVGLNLFL-SSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVV 83
Cdd:MTH00030   9 FFSTLLGVGIILLLVSISFTLgNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIV 88

                         90       100       110
                 ....*....|....*....|....*....|....
gi 736388501  84 LKGAGAHVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:MTH00030  89 FNQLNLFSFWIVYTFLIVLAIGLAYEWIKGGLEW 122
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 12-117 7.75e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 59.89  E-value: 7.75e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501  12 LLIGLAFVGLNLFLSSLIRPSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFP--WAVVLKgAGA 89
Cdd:MTH00113   7 LTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPlpWAINLT-TPT 85

                         90       100
                 ....*....|....*....|....*...
gi 736388501  90 HVLIHMMIFLAILAVGLVYSWGKGDLDW 117
Cdd:MTH00113  86 TTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 34-117 1.06e-11

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 57.24  E-value: 1.06e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501  34 PNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFI--FPWAVVLKgAGAHVLIHMMIFLAILAVGLVYSWG 111
Cdd:MTH00136  30 PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLP-SPLLTFFWATAVLILLTLGLIYEWL 108


                 ....*.
gi 736388501 112 KGDLDW 117
Cdd:MTH00136 109 QGGLEW 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 38-117 2.05e-09

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 51.09  E-value: 2.05e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501  38 KLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIF--PWAVVLKGAGAhVLIHMMIFLAILAVGLVYSWGKGDL 115
Cdd:MTH00106  33 KASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLplPWASQTNNLNT-MLTMALLLISLLALSLAYEWTQKGL 111


                 ..
gi 736388501 116 DW 117
Cdd:MTH00106 112 EW 113
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 31-119 1.20e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 49.81  E-value: 1.20e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736388501  31 PSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVFIFPWAVVLKGAGAHVLIHMMIFLAILAVGLVYSW 110
Cdd:PRK06432  56 PPGSDQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPFIETLIFLAMPLFAVYYAF 135


                 ....*....
gi 736388501 111 GKGDLDWIK 119
Cdd:PRK06432 136 KMGYMRWLK 144
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 9-76 7.98e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 33.71  E-value: 7.98e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 736388501   9 FWFLLIGLAFVGLNLFLSSlirpSDPNPTKLTPYECGEESEGTGFVRFNPRFYVIALVFLIFDIETVF 76
Cdd:MTH00092   9 LFTLLLLMLLYLLNFFLSV----KKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVM 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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