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Conserved domains on  [gi|740777155|ref|WP_038562439|]
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YxlC family protein [Terribacillus goriensis]

Protein Classification

YxlC family protein( domain architecture ID 13879460)

YxlC family protein is a DUF5345 domain-containing protein; similar to Bacillus subtilis protein YxlC

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5345 pfam17280
Family of unknown function (DUF5345); This is a family of unknown function. It is found mostly ...
 10-85 1.47e-23

Family of unknown function (DUF5345); This is a family of unknown function. It is found mostly in Bacteria. Members of this family are predicted to contain 2 trans-membrane regions.


:

Pssm-ID: 435836  Cd Length: 77  Bit Score: 85.33  E-value: 1.47e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 740777155   10 MDETWENMDTKLHIDVPETDEMLQQISSGEKRYRERMHRELCGFIILACVLVSFYILIAVHITWAFYVLQIISIIA 85
Cdd:pfam17280   1 LKDGLDRLDQLIDVETPSLEELEQLLAAAKERRRKRLRRELLLFWLIALIILSGILLAAVQAPAVFIVIQGIAFIA 76
 
Name Accession Description Interval E-value
DUF5345 pfam17280
Family of unknown function (DUF5345); This is a family of unknown function. It is found mostly ...
 10-85 1.47e-23

Family of unknown function (DUF5345); This is a family of unknown function. It is found mostly in Bacteria. Members of this family are predicted to contain 2 trans-membrane regions.


Pssm-ID: 435836  Cd Length: 77  Bit Score: 85.33  E-value: 1.47e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 740777155   10 MDETWENMDTKLHIDVPETDEMLQQISSGEKRYRERMHRELCGFIILACVLVSFYILIAVHITWAFYVLQIISIIA 85
Cdd:pfam17280   1 LKDGLDRLDQLIDVETPSLEELEQLLAAAKERRRKRLRRELLLFWLIALIILSGILLAAVQAPAVFIVIQGIAFIA 76
 
Name Accession Description Interval E-value
DUF5345 pfam17280
Family of unknown function (DUF5345); This is a family of unknown function. It is found mostly ...
 10-85 1.47e-23

Family of unknown function (DUF5345); This is a family of unknown function. It is found mostly in Bacteria. Members of this family are predicted to contain 2 trans-membrane regions.


Pssm-ID: 435836  Cd Length: 77  Bit Score: 85.33  E-value: 1.47e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 740777155   10 MDETWENMDTKLHIDVPETDEMLQQISSGEKRYRERMHRELCGFIILACVLVSFYILIAVHITWAFYVLQIISIIA 85
Cdd:pfam17280   1 LKDGLDRLDQLIDVETPSLEELEQLLAAAKERRRKRLRRELLLFWLIALIILSGILLAAVQAPAVFIVIQGIAFIA 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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