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Conserved domains on  [gi|746446932|ref|WP_039486848|]
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MULTISPECIES: TonB-dependent siderophore receptor [Pseudoalteromonas]

Protein Classification

TonB-dependent siderophore receptor( domain architecture ID 11469152)

TonB-dependent siderophore receptor acts as a channel to allow import of extracellular nutrients such as iron-siderophore complexes; similar to Yersinia enterocolitica ferrioxamine receptor

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
9-692 4.70e-169

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


:

Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 500.58  E-value: 4.70e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   9 ALLASITTSTYANTTDLERIEVKGS--YFNDYKVDNANGAMRTSASLLETAQSVTVITDTIISEQLATTLGEVLTNDASL 86
Cdd:COG4773   16 GALAQAAAAAAAEATTLPEVTVTGTaeGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGV 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  87 TAGSQQRN-REVFNLRGFELSSstgYLRDG--HQHWSHYQQPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQT 163
Cdd:COG4773   96 TVSSYDGGgRDSFSIRGFSIDN---YLRDGlpLGGFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEP 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 164 LFNASADVDQHGSTRFMVDAAGALTESEDLRARGILVKQDVDYWREYQngenrERDRFLGALVVDYDISDNALVRVHYDR 243
Cdd:COG4773  173 QGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGV-----DNRRTLIAPSLDWDLTDDTTLTLGAEY 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 244 TDDEAGLDTGAWIDDNANI-IGNDKTIrDMSWAFTDITVENLGVDLEVFLTDNWQVKLGYNEQTFERQRFESSPSrNSYD 322
Cdd:COG4773  248 QDDDSTGDRGFLPLDGTLLdLPRSTNL-GEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAY-GAPD 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 323 AQTNTYTSNPYDRFDDWQFKTAFIDFIGEFEMAGIQHQFLIGANSLDYYYGQLRTSADSFSFTAGQNEPARPDISYKTDl 402
Cdd:COG4773  326 AATGTLTRYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDSATAGTINIYNPVYGNLPEPDFDASD- 404
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 403 tkSETEYDYYGLYAQDLITFSEQWQVSVGARFDKQTREGQNNES----------FLPKFGVLYHPNASATIYASYTEGFE 472
Cdd:COG4773  405 --TDTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGgsttsyddsaFTPRAGLVYDLTPGLSLYASYSESFE 482
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 473 PQNETITNdkdinfGMEIDAVTSEQRELGIKWQLLDDRLLLSGAVFDISKNGTLVTedleapIGSITTETNQVGEQRHKG 552
Cdd:COG4773  483 PQSGADNN------GNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATT------DPDNPNFYVQVGEVRSRG 550
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 553 FEVAAQGAATDRLFVMASAMYLDANYERANEELQGKRPTDAPKWSASLWTRYELNDAIA----FNAGAFYEGERFADSDN 628
Cdd:COG4773  551 VELELSGELTPGLNLIAGYTYTDAKITKDADALEGKRLTNVPRHTASLWTTYRFPSGALkglgLGGGVRYVGERYGDAAN 630
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 746446932 629 TITKDAYTRVDVGATYKFnlsNTDINLRLNIENLFDKSYL-GGGGTSNVTVGEGTNLRLAAQFSF 692
Cdd:COG4773  631 TFTLPSYTLVDAGARYDL---GKNWTLQLNVNNLFDKKYYaSSGSRGYVYYGAPRNVRLSLSYKF 692
 
Name Accession Description Interval E-value
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
9-692 4.70e-169

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 500.58  E-value: 4.70e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   9 ALLASITTSTYANTTDLERIEVKGS--YFNDYKVDNANGAMRTSASLLETAQSVTVITDTIISEQLATTLGEVLTNDASL 86
Cdd:COG4773   16 GALAQAAAAAAAEATTLPEVTVTGTaeGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGV 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  87 TAGSQQRN-REVFNLRGFELSSstgYLRDG--HQHWSHYQQPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQT 163
Cdd:COG4773   96 TVSSYDGGgRDSFSIRGFSIDN---YLRDGlpLGGFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEP 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 164 LFNASADVDQHGSTRFMVDAAGALTESEDLRARGILVKQDVDYWREYQngenrERDRFLGALVVDYDISDNALVRVHYDR 243
Cdd:COG4773  173 QGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGV-----DNRRTLIAPSLDWDLTDDTTLTLGAEY 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 244 TDDEAGLDTGAWIDDNANI-IGNDKTIrDMSWAFTDITVENLGVDLEVFLTDNWQVKLGYNEQTFERQRFESSPSrNSYD 322
Cdd:COG4773  248 QDDDSTGDRGFLPLDGTLLdLPRSTNL-GEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAY-GAPD 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 323 AQTNTYTSNPYDRFDDWQFKTAFIDFIGEFEMAGIQHQFLIGANSLDYYYGQLRTSADSFSFTAGQNEPARPDISYKTDl 402
Cdd:COG4773  326 AATGTLTRYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDSATAGTINIYNPVYGNLPEPDFDASD- 404
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 403 tkSETEYDYYGLYAQDLITFSEQWQVSVGARFDKQTREGQNNES----------FLPKFGVLYHPNASATIYASYTEGFE 472
Cdd:COG4773  405 --TDTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGgsttsyddsaFTPRAGLVYDLTPGLSLYASYSESFE 482
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 473 PQNETITNdkdinfGMEIDAVTSEQRELGIKWQLLDDRLLLSGAVFDISKNGTLVTedleapIGSITTETNQVGEQRHKG 552
Cdd:COG4773  483 PQSGADNN------GNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATT------DPDNPNFYVQVGEVRSRG 550
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 553 FEVAAQGAATDRLFVMASAMYLDANYERANEELQGKRPTDAPKWSASLWTRYELNDAIA----FNAGAFYEGERFADSDN 628
Cdd:COG4773  551 VELELSGELTPGLNLIAGYTYTDAKITKDADALEGKRLTNVPRHTASLWTTYRFPSGALkglgLGGGVRYVGERYGDAAN 630
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 746446932 629 TITKDAYTRVDVGATYKFnlsNTDINLRLNIENLFDKSYL-GGGGTSNVTVGEGTNLRLAAQFSF 692
Cdd:COG4773  631 TFTLPSYTLVDAGARYDL---GKNWTLQLNVNNLFDKKYYaSSGSRGYVYYGAPRNVRLSLSYKF 692
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
55-692 6.53e-81

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 270.05  E-value: 6.53e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   55 ETAQSVTVITDTIISEQLATTLGEVLTNDASLTAGSQQ--RNREVFNLRGFELSSST-GYLRDG-HQHWSHYQQPI--EI 128
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGgtTQFGNITIRGFGLEVDIdNVYLDGvPLLSRGNLAIVdpAM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  129 LQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNASADVDQHGSTRFMVDAAGALTESEDLRARGILVKQDVDYWR 208
Cdd:TIGR01783  81 VERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDSFY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  209 EYQNGENRerdrfLGALVVDYDISDNALVRVHYDRTDDEAGLDTGAWiddnanIIGNDKTIRDMS----------WAFTD 278
Cdd:TIGR01783 161 DGAGEETR-----LGATATDWQLDDRTLLRLGAYYQKERDRGGYGGL------PASGGTSGRDLSsdrylgtssnRNYDD 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  279 ITVENLGVDLEVFLTDNWQVK--LGYNEQTFERQRFESSPSRNSYDAQTNTYTSNPYDRfDDWQFKTafiDFIGEFEMAG 356
Cdd:TIGR01783 230 REYLSYGLSLEYQFNDVWTGKqnLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKQ-DRVQIDA---GLDGEFETGP 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  357 IQHQFLIGANSL----DYYYGQLRTSADSFSFTAGQnePARPDISYKTDLTKSETEYDYYGLYAQDLITFSEQWQVSVGA 432
Cdd:TIGR01783 306 IEHDLLLGVSYGqrttNRFNNTGYPSDNIYSLTATS--SARTDIGDSPKDRALSSTTKALNGVALQRILLADKWTLTLGG 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  433 RFD-----------KQTREGQNNEsFLPKFGVLYHPNASATIYASYTEGFEPQNetiTNDKDINFGMEI-DAVTSEQREL 500
Cdd:TIGR01783 384 RYDsvdvksnngvaGSTGKRDDSQ-FTPSLGVAYKPTDDWSLYASYAESFKPGG---YYPKGAGNSGDIlEPEKGKNYEL 459
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  501 GIKWQlLDDRLLLSGAVFDISKNGTLVTedleAPIGSitTETNQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANY-E 579
Cdd:TIGR01783 460 GVRYD-LGDSLLATAALFRITKDNQLVQ----DPVNG--TFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFtE 532
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  580 RANEELQGKRPTDAPKWSASLWTRYELND---AIAFNAGAFYEGERFADSDNTITKDAYTRVDVGATYKFNlSNTDINLR 656
Cdd:TIGR01783 533 DTNGDTQGNTVPFVPKHTASLWASYAPPVgdnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLT-KKKNLTLA 611
                         650       660       670       680
                  ....*....|....*....|....*....|....*....|
gi 746446932  657 LNIENLFDKSY--LGGGGTSNVTV--GEGTNLRLAAQFSF 692
Cdd:TIGR01783 612 LNVNNLFDRDYytSGYRWGPSAYIypGAPRTVGLSVSYDF 651
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
59-692 1.10e-77

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 260.85  E-value: 1.10e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  59 SVTVITDTIISEQLATTLGEVLTNDASLTAGSQQRNR-EVFNLRGFElSSSTGYLRDG--------HQHWSHYQQPIEIL 129
Cdd:cd01347    1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGgSTISIRGFG-PDRTLVLVDGlplassnyGRGVDLNTIPPELI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 130 QQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNASAD-----VDQHGSTRFmvDAAGALTESEDLRARGILVKQDV 204
Cdd:cd01347   80 ERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGygsdnSGSSGGGGF--DVSGALADDGAFGARLYGAYRDG 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 205 DYWREYQNGENRE-RDRFLGALVVDYDISDNALVRVHYDRTDDEAGLDTGAWIDDNANIIGNDKTIRDM----SWAFTDI 279
Cdd:cd01347  158 DGTIDGDGQADDSdEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTngdrDWDYRDR 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 280 TVENLGVDLEVFLTD-NWQVK--LGYNEqtfERQRFESSPSRNSYDAQTNTYTSNPYDRFDDWQFKTAFIDFIGEFEMAG 356
Cdd:cd01347  238 YRKRASLGLEHDLNDtGWTLRanLSYSY---TDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGTGP 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 357 IQHQFLIGAnsldyyygqlrtsadsfsftagqneparpdisyktDLTKSETEYDYYGLYAQDLITFSEQWQVSVGARFDK 436
Cdd:cd01347  315 VAHTLTLGV-----------------------------------EYRREELDEKQTALYAQDTIELTDDLTLTLGLRYDH 359
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 437 QTREGQNNES-----------FLPKFGVLYHPNASATIYASYTEGFEPQN-----ETITNDKDINFGMEI-DAVTSEQRE 499
Cdd:cd01347  360 YDQDSKDTIAggttakksyshWSPSLGLVYKLTDGLSLYASYSQGFRAPSlgelyGGGSHGGTAAVGNPNlKPEKSKQYE 439
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 500 LGIKWQlLDDRLLLSGAVFDISKNGTLVTEDLEAPIGSITTETNqVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANYE 579
Cdd:cd01347  440 LGLKYD-PGDGLTLSAALFRIDIKNEIVSTPTNTGLGLVTVYVN-GGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVK 517
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 580 RANEELQGKRPTDAPKWSASLWTRYELN-DAIAFNAGAFYEGERFADS---DNTITKDAYTRVDVGATYKFnlsNTDINL 655
Cdd:cd01347  518 RTDGATTGNRLPGIPKHTANLGLDYELPdEGLTAGGGVRYRGKQYADTangNNTVKVPGYTLVDLSASYQF---TKNLTL 594
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|.
gi 746446932 656 RLNIENLFDKSY----LGGGGTSNVTVGEGTNLRLAAQFSF 692
Cdd:cd01347  595 RLGVNNLFDKDYytslSVRGSGLYGYYGPGRTYYLSVSYKF 635
PRK14050 PRK14050
TonB-dependent siderophore receptor;
8-681 1.02e-43

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 168.06  E-value: 1.02e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   8 IALLASITTSTYA----NTTDLERIEVKG---------SYFNDYKVDNANGAMRTSASLLETAQSVTVITDTIISEQLAT 74
Cdd:PRK14050  18 VALAALVLSGLVAaqegNTTQLETIVVEGgnaasatatGPVDGYVAKATATGSKTDTPITEIPQSVSVVGRQEMDDRGVT 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  75 T-LGEVLTNDASLTAG--SQQRNREVFNLRGFElSSSTGYLRDGHQHWSH----YQQPIEILQQVEVIKGPSSILYGQSG 147
Cdd:PRK14050  98 NkVDEALRYTPGVLSQpfGTDGDTDWFYIRGFD-ATQTGVFLDGLNLFSYgfggFQIDPFMLERVEVLKGPASVLYGGSN 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 148 PGGLVNMVTKKPTAQTLFNASADVDQHGSTRFMVDAAGALTESEDLRARgilVKQDVDYWREYQNGENRERDRFLGALVV 227
Cdd:PRK14050 177 PGGIVNMVSKRPLDEPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYR---VTGKVAGGDNYSDYSEDLRGFIMPQITY 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 228 DYDISDNALVRVHY---DRTDDEAGL--DTGAWIDDNANIIGNDKTIRDMSWAFTDITVENLGVDLEVFLTDNWQVKlgY 302
Cdd:PRK14050 254 APDDATSLTVYGYLsglDQVHVGNGFlpYVGTVVDAPFGKIDRDAFYGEPDIDNGSYAQQMLGYEFSHEFDNGWTFS--Q 331
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 303 NEQTFERQRFESSPSRNSY--------DAQTNTYTSNPYDRFDDWQFKTAFID--FIGEFEMAGIQHQFLIGansLDYYY 372
Cdd:PRK14050 332 NARYGHLHKHEKGPYTYGYvggatglpDPTGPDYMLNRIGFEHRSKVDSFSIDnrLEGEFDTGALTHNLLFG---LDYKY 408
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 373 GQLR--------TSADSFSFTAGqnEPARPDISY-KTDLTKSETeydyyGLYAQDLITFSEQWQVSVGARFD-------- 435
Cdd:PRK14050 409 YRLDqvqaccgaTPISATNPVYG--TTQGANFVYlDQILTQQQI-----GIYAQDQIRFGDGWLVTLNGRYDyvdtdsda 481
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 436 -KQTREGQNNESFLPKFGVLYHPNASATIYASYTEGFEPQNETITNdkdinfGMEIDAVTSEQRELGIKWQ--LLDDrlL 512
Cdd:PRK14050 482 rIGTSYESNDGALSGRAGLAYEFDNGLTPYVSAATFFNPLVGTLAS------GPPLKPEEGEQYEAGIKYEpsFIDG--L 553
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 513 LSGAVFDISKNGTLVTEDLeapigsiTTETNQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANY-ERANEELQGKRPT 591
Cdd:PRK14050 554 ITASVFQITKKNVTVTDPL-------TFASTQLGEVRSRGFELEGKVNLDDNWKALASFTYTDLEItEDANPSLIGNSPY 626
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 592 DAPKWSASLWTRYELND----AIAFNAGAFYEGERFADSDNTITKDAYTRVDVGATYKFNlsntDINLRLNIENLFDKSY 667
Cdd:PRK14050 627 LVPETQASLWLDYAVTDgafeGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYEKN----DWGASLNVANLFDKEY 702
                        730
                 ....*....|....*
gi 746446932 668 LGG-GGTSNVTVGEG 681
Cdd:PRK14050 703 VAGcQGLLVCGYGES 717
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
228-691 1.17e-43

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 163.79  E-value: 1.17e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  228 DYDISDNALVRVHYDRTDDEAGLDTGAWID---DNANIIGNDKTIRDMSWAFTDITVENLGVDLEVFLTDNWQVKLGYNe 304
Cdd:pfam00593   6 LDLLGDDTLLTLGYDYSRYTDGLDLGLTLDgygNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLG- 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  305 qtferQRFESSPSRNSYDAQTNTYTSNPYDRFDDWQFKTAFIDFIGEFEmagIQHQFLIGANSLDYYYGQLRTSADSFSF 384
Cdd:pfam00593  85 -----LRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLD---LSHDLLLGVELRTAGLDYRRLDDDAYDP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  385 TagqneparpDISYKTDLTKSETEYDYYGLYAQDLITFSEQWQVSVGARFDKQTREGQNNES-----------FLPKFGV 453
Cdd:pfam00593 157 Y---------DPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGggdnfsrsysaFSPRLGL 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  454 LYHPNASATIYASYTEGFE-PQ-NETITNDKDINFG------MEIDAVTSEQRELGIKWQllDDRLLLSGAVFDISKNGT 525
Cdd:pfam00593 228 VYKPTDNLSLYASYSRGFRaPSlGELYGSGSGGGGGavaggnPDLKPETSDNYELGLKYD--DGRLSLSLALFYIDIKNL 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  526 LVTEDLEAPIGSITTETNQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANYeRANEELQGKRPTDAPKWSASLWTRYE 605
Cdd:pfam00593 306 ITSDPDGPGLGGTVYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADD-DADADDTGNPLPNVPRHTANLGLTYD 384
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  606 L-NDAIAFNAGAFYEGE---RFADSDNTITKDAYTRVDVGATYKFnlsNTDINLRLNIENLFDKSY----LGGGGTSNVT 677
Cdd:pfam00593 385 FpLGGWGARLGARYVGSgerRYGDAANTFKTPGYTLVDLSAGYRL---NKNLTLRLGVNNLFDKYYkryySSGGGNLGGY 461
                         490
                  ....*....|....
gi 746446932  678 VGEGTNLRLAAQFS 691
Cdd:pfam00593 462 PGPGRTFYLGLSYK 475
 
Name Accession Description Interval E-value
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
9-692 4.70e-169

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 500.58  E-value: 4.70e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   9 ALLASITTSTYANTTDLERIEVKGS--YFNDYKVDNANGAMRTSASLLETAQSVTVITDTIISEQLATTLGEVLTNDASL 86
Cdd:COG4773   16 GALAQAAAAAAAEATTLPEVTVTGTaeGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGV 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  87 TAGSQQRN-REVFNLRGFELSSstgYLRDG--HQHWSHYQQPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQT 163
Cdd:COG4773   96 TVSSYDGGgRDSFSIRGFSIDN---YLRDGlpLGGFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEP 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 164 LFNASADVDQHGSTRFMVDAAGALTESEDLRARGILVKQDVDYWREYQngenrERDRFLGALVVDYDISDNALVRVHYDR 243
Cdd:COG4773  173 QGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGV-----DNRRTLIAPSLDWDLTDDTTLTLGAEY 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 244 TDDEAGLDTGAWIDDNANI-IGNDKTIrDMSWAFTDITVENLGVDLEVFLTDNWQVKLGYNEQTFERQRFESSPSrNSYD 322
Cdd:COG4773  248 QDDDSTGDRGFLPLDGTLLdLPRSTNL-GEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAY-GAPD 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 323 AQTNTYTSNPYDRFDDWQFKTAFIDFIGEFEMAGIQHQFLIGANSLDYYYGQLRTSADSFSFTAGQNEPARPDISYKTDl 402
Cdd:COG4773  326 AATGTLTRYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDSATAGTINIYNPVYGNLPEPDFDASD- 404
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 403 tkSETEYDYYGLYAQDLITFSEQWQVSVGARFDKQTREGQNNES----------FLPKFGVLYHPNASATIYASYTEGFE 472
Cdd:COG4773  405 --TDTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGgsttsyddsaFTPRAGLVYDLTPGLSLYASYSESFE 482
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 473 PQNETITNdkdinfGMEIDAVTSEQRELGIKWQLLDDRLLLSGAVFDISKNGTLVTedleapIGSITTETNQVGEQRHKG 552
Cdd:COG4773  483 PQSGADNN------GNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATT------DPDNPNFYVQVGEVRSRG 550
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 553 FEVAAQGAATDRLFVMASAMYLDANYERANEELQGKRPTDAPKWSASLWTRYELNDAIA----FNAGAFYEGERFADSDN 628
Cdd:COG4773  551 VELELSGELTPGLNLIAGYTYTDAKITKDADALEGKRLTNVPRHTASLWTTYRFPSGALkglgLGGGVRYVGERYGDAAN 630
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 746446932 629 TITKDAYTRVDVGATYKFnlsNTDINLRLNIENLFDKSYL-GGGGTSNVTVGEGTNLRLAAQFSF 692
Cdd:COG4773  631 TFTLPSYTLVDAGARYDL---GKNWTLQLNVNNLFDKKYYaSSGSRGYVYYGAPRNVRLSLSYKF 692
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
48-692 1.67e-157

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 468.97  E-value: 1.67e-157
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  48 RTSASLLETAQSVTVITDTIISEQLATTLGEVLTNDASLTAGSQQ-RNREVFNLRGFelSSSTGYLRDGHQHWSHYQQPI 126
Cdd:COG4774    1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEgGNGDSFSIRGF--SASGDIYVDGLRDPGQYRRDT 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 127 EILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNASADVDQHGSTRFMVDAAGALteSEDLRARGILVKQDVDY 206
Cdd:COG4774   79 FNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPL--GDDLAYRLNGMYRDSDS 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 207 WREYQngenrERDRFLGALVVDYDISDNALVRVHYDRTDDEAGLDTGAWIDDNANIIGNDKTIR-DMSWAFTDITVENLG 285
Cdd:COG4774  157 YRDGV-----DNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVPAVANGRPVDVDRSTFyGQPDDYSDSETDSAT 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 286 VDLEVFLTDNWQVKLGYNEQTFERQRFESSPSRNSydaQTNTYTSNPYDRFDDWQFKTAFIDFIGEFEMAGIQHQFLIGA 365
Cdd:COG4774  232 LRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGN---ATGTVTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTLLAGV 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 366 --NSLDYYYGQLRTSADSFSFTAGQNEPARPDISYKTDLTKSETEYDYYGLYAQDLITFSEQWQVSVGARFDK------- 436
Cdd:COG4774  309 eySREDSDNARYSGGGTAPTVNLYNPVYGAPVTGPTLGGADNDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRfdtdytd 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 437 ----QTREGQNNESFLPKFGVLYHPNASATIYASYTEGFEPQNETITNDkdiNFGMEIDAVTSEQRELGIKWQLLDDRLL 512
Cdd:COG4774  389 rttgATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSLS---NAGQALDPEKSRQYEVGVKWDLLDGRLS 465
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 513 LSGAVFDISKNGTLVTEDLEapigsiTTETNQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANYERANE-ELQGKRPT 591
Cdd:COG4774  466 LTAALFRIEKTNVRTTDPAN------PGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANaANVGNRLP 539
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 592 DAPKWSASLWTRYELN-DAIAFNAGAFYEGERFADSDNTITKDAYTRVDVGATYKFnlsNTDINLRLNIENLFDKSY-LG 669
Cdd:COG4774  540 NVPRHSASLWTTYDLPlPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRL---NKNLTLRLNVNNLTDKRYyAS 616
                        650       660
                 ....*....|....*....|...
gi 746446932 670 GGGTSNVTVGEGTNLRLAAQFSF 692
Cdd:COG4774  617 AYGSGYVTPGAPRTVLLSASYRF 639
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
55-692 6.53e-81

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 270.05  E-value: 6.53e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   55 ETAQSVTVITDTIISEQLATTLGEVLTNDASLTAGSQQ--RNREVFNLRGFELSSST-GYLRDG-HQHWSHYQQPI--EI 128
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGgtTQFGNITIRGFGLEVDIdNVYLDGvPLLSRGNLAIVdpAM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  129 LQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNASADVDQHGSTRFMVDAAGALTESEDLRARGILVKQDVDYWR 208
Cdd:TIGR01783  81 VERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDSFY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  209 EYQNGENRerdrfLGALVVDYDISDNALVRVHYDRTDDEAGLDTGAWiddnanIIGNDKTIRDMS----------WAFTD 278
Cdd:TIGR01783 161 DGAGEETR-----LGATATDWQLDDRTLLRLGAYYQKERDRGGYGGL------PASGGTSGRDLSsdrylgtssnRNYDD 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  279 ITVENLGVDLEVFLTDNWQVK--LGYNEQTFERQRFESSPSRNSYDAQTNTYTSNPYDRfDDWQFKTafiDFIGEFEMAG 356
Cdd:TIGR01783 230 REYLSYGLSLEYQFNDVWTGKqnLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKQ-DRVQIDA---GLDGEFETGP 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  357 IQHQFLIGANSL----DYYYGQLRTSADSFSFTAGQnePARPDISYKTDLTKSETEYDYYGLYAQDLITFSEQWQVSVGA 432
Cdd:TIGR01783 306 IEHDLLLGVSYGqrttNRFNNTGYPSDNIYSLTATS--SARTDIGDSPKDRALSSTTKALNGVALQRILLADKWTLTLGG 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  433 RFD-----------KQTREGQNNEsFLPKFGVLYHPNASATIYASYTEGFEPQNetiTNDKDINFGMEI-DAVTSEQREL 500
Cdd:TIGR01783 384 RYDsvdvksnngvaGSTGKRDDSQ-FTPSLGVAYKPTDDWSLYASYAESFKPGG---YYPKGAGNSGDIlEPEKGKNYEL 459
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  501 GIKWQlLDDRLLLSGAVFDISKNGTLVTedleAPIGSitTETNQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANY-E 579
Cdd:TIGR01783 460 GVRYD-LGDSLLATAALFRITKDNQLVQ----DPVNG--TFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFtE 532
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  580 RANEELQGKRPTDAPKWSASLWTRYELND---AIAFNAGAFYEGERFADSDNTITKDAYTRVDVGATYKFNlSNTDINLR 656
Cdd:TIGR01783 533 DTNGDTQGNTVPFVPKHTASLWASYAPPVgdnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLT-KKKNLTLA 611
                         650       660       670       680
                  ....*....|....*....|....*....|....*....|
gi 746446932  657 LNIENLFDKSY--LGGGGTSNVTV--GEGTNLRLAAQFSF 692
Cdd:TIGR01783 612 LNVNNLFDRDYytSGYRWGPSAYIypGAPRTVGLSVSYDF 651
CirA COG1629
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
46-678 1.08e-80

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];


Pssm-ID: 441236 [Multi-domain]  Cd Length: 644  Bit Score: 269.39  E-value: 1.08e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  46 AMRTSASLLETAQSVTVITDTIISEQLATTLGEVLTNDASLTAGSQQRNREVFNLRGFELSSS-TGYLRDG--------H 116
Cdd:COG1629    8 ATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGFGGGGNrVLVLVDGvplndpsgG 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 117 QHWSHYQqPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNASADVDQHGSTRFMVDAAGAlteSEDLRAR 196
Cdd:COG1629   88 DGGLSYI-DPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLSGG---NGKLAYR 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 197 GILVKQDVDYWReyqngENRERDRFLGALVVDYDISDNALVRVHYDRTDDEAGLDTGAWIDDNANIIGNDKTIRDMSWAF 276
Cdd:COG1629  164 LSASYRDSDGYR-----DNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGAMDDGTNPYSNDT 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 277 TDITVENLGVDLEV-FLTDNWQVKLGYNEQTFERQRFESSPSRNSYDAQTNTYTsnpyDRFDDWQFKTAFiDFIGEFema 355
Cdd:COG1629  239 DDNTRDRYSLSLEYeHLGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTD----FDNRTYGLELRL-TYDLGF--- 310
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 356 GIQHQFLIGansldYYYGQLRTSADSFSFTAGqnepaRPDISYKTDLTKSETEYDYYGLYAQDLITFSEQWQVSVGARFD 435
Cdd:COG1629  311 GGKHTLLVG-----LDYQRQDLDGSGYPLDLG-----SGSLPTLTSGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYD 380
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 436 KQTREGQNNES-------------FLPKFGVLYHPNASATIYASYTEGFEPQNE----TITNDKDINFGMEIDAVTSEQR 498
Cdd:COG1629  381 YVSYDVDDTVTgtdsasgsrsysaFSPSLGLTYQLSPNLSLYASYSRGFRAPTFgelyANGTDPYSVGNPDLKPETSTNY 460
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 499 ELGIKWQLLDDRLLLSGAVFDISKNGTLVTEDLEAPIGSITTETNqVGEQRHKGFEVAAQGAATDRLFVMASAMYLDA-- 576
Cdd:COG1629  461 ELGLRYRLLDGRLSLSLALFYSDVDNEILSVPLPNDSGFSTYYTN-AGKARSYGVELELSYQLTPGLSLNASYSYTDAkf 539
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 577 -NYERANEELQGKRPTDAPKWSASLWTRYELNDAIAFNAGAFYEGERFADSDNTITKD-AYTRVDVGATYKFNLsntDIN 654
Cdd:COG1629  540 dDDTDGSADLDGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANTQGAPgGYTLVDLGAGYRFGD---NLT 616
                        650       660
                 ....*....|....*....|....
gi 746446932 655 LRLNIENLFDKSYLGGGGTSNVTV 678
Cdd:COG1629  617 LSLGVDNLFDKKYATSLSVRASNV 640
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
59-692 1.10e-77

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 260.85  E-value: 1.10e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  59 SVTVITDTIISEQLATTLGEVLTNDASLTAGSQQRNR-EVFNLRGFElSSSTGYLRDG--------HQHWSHYQQPIEIL 129
Cdd:cd01347    1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGgSTISIRGFG-PDRTLVLVDGlplassnyGRGVDLNTIPPELI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 130 QQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNASAD-----VDQHGSTRFmvDAAGALTESEDLRARGILVKQDV 204
Cdd:cd01347   80 ERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGygsdnSGSSGGGGF--DVSGALADDGAFGARLYGAYRDG 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 205 DYWREYQNGENRE-RDRFLGALVVDYDISDNALVRVHYDRTDDEAGLDTGAWIDDNANIIGNDKTIRDM----SWAFTDI 279
Cdd:cd01347  158 DGTIDGDGQADDSdEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTngdrDWDYRDR 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 280 TVENLGVDLEVFLTD-NWQVK--LGYNEqtfERQRFESSPSRNSYDAQTNTYTSNPYDRFDDWQFKTAFIDFIGEFEMAG 356
Cdd:cd01347  238 YRKRASLGLEHDLNDtGWTLRanLSYSY---TDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGTGP 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 357 IQHQFLIGAnsldyyygqlrtsadsfsftagqneparpdisyktDLTKSETEYDYYGLYAQDLITFSEQWQVSVGARFDK 436
Cdd:cd01347  315 VAHTLTLGV-----------------------------------EYRREELDEKQTALYAQDTIELTDDLTLTLGLRYDH 359
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 437 QTREGQNNES-----------FLPKFGVLYHPNASATIYASYTEGFEPQN-----ETITNDKDINFGMEI-DAVTSEQRE 499
Cdd:cd01347  360 YDQDSKDTIAggttakksyshWSPSLGLVYKLTDGLSLYASYSQGFRAPSlgelyGGGSHGGTAAVGNPNlKPEKSKQYE 439
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 500 LGIKWQlLDDRLLLSGAVFDISKNGTLVTEDLEAPIGSITTETNqVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANYE 579
Cdd:cd01347  440 LGLKYD-PGDGLTLSAALFRIDIKNEIVSTPTNTGLGLVTVYVN-GGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVK 517
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 580 RANEELQGKRPTDAPKWSASLWTRYELN-DAIAFNAGAFYEGERFADS---DNTITKDAYTRVDVGATYKFnlsNTDINL 655
Cdd:cd01347  518 RTDGATTGNRLPGIPKHTANLGLDYELPdEGLTAGGGVRYRGKQYADTangNNTVKVPGYTLVDLSASYQF---TKNLTL 594
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|.
gi 746446932 656 RLNIENLFDKSY----LGGGGTSNVTVGEGTNLRLAAQFSF 692
Cdd:cd01347  595 RLGVNNLFDKDYytslSVRGSGLYGYYGPGRTYYLSVSYKF 635
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
9-692 1.70e-55

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 201.31  E-value: 1.70e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   9 ALLASITTSTYANTTDLERIEVKGSYFndykvdnangamrTSASLLETAQSVTVITDTIISEQLATTLGEVLtndaSLTA 88
Cdd:COG4772    7 AALLLAAAAAAEAATTLETVVVTGSRA-------------AEARLKDVPGSVSVVDREELENQAATSLREVL----RRVP 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  89 GSQQRNREVFNL------RGF--ELSSSTGYLRDG--------HQHWSHYQQPIEILQQVEVIKGPSSILYGQSGPGGLV 152
Cdd:COG4772   70 GVNVQEEDGFGLrpnigiRGLgpRRSRGITLLEDGipiapapyGDPAAYYFPDLERMERIEVLRGAAALRYGPQTVGGAI 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 153 NMVTKKPTAQTLFNASADVDQHGSTRFMVDAAGAlteSEDLRARGILVKQDVDYWReyqngENRERDRFLGALVVDYDIS 232
Cdd:COG4772  150 NFVTRTIPTAFGGELRVTGGSFGYRRTHASVGGT---VGNFGYLVEYSRKRGDGFR-----DNSGFDINDFNAKLGYRLS 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 233 DNALVRVHYDRTDDEA----GLDTGAWIDD-NANIIGNDKtirdmswaftditvenlgvdlevFLTDNWQVKLGYNEQTF 307
Cdd:COG4772  222 DRQELTLKFQYYDEDAntpgGLTDAQFDADpRQSYRPADQ-----------------------FDTRRTQLSLRYEHQLS 278
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 308 ERQRFESSP-----SRNSY--DAQTNTYTSNPYDRFDDWQFKTAFID--FIGEFEMAGIQHQFLIGansLDYYYGqlrtS 378
Cdd:COG4772  279 DNTTLTTTAyyndfSRNWYirQNTADPNTPGLGLRGNPRGYRSYGIEprLTHRFELGGVPHTLEVG---LRYHRE----E 351
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 379 ADSFSFTAGQNEPARPDISykTDLTKSETeyDYYGLYAQDLITFSEQWQVSVGARFD--KQTREG-------------QN 443
Cdd:COG4772  352 EDRKQYVNTYGQGRSGAGL--RRDRRFSA--DALAAYAQNRFELTGRLTLTPGLRYEhiRRDRTDrystrtggddsgsNS 427
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 444 NESFLPKFGVLYHPNASATIYASYTEGFE-PQNETITNDKDINFGmeIDAVTSEQRELGIKWQlLDDRLLLSGAVFDISK 522
Cdd:COG4772  428 YSEFLPGLGLLYQLTDNLQLYANVSRGFEpPTFGDLAYGNGGNPD--LKPEKSWNYELGTRGR-IGNGLSAEVALFYIDY 504
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 523 NGTLVTedLEAPIGSITTETNqVGEQRHKGFEVAA----QGAATDRLFVMASAMYLDANYERAN-EELQGKRPTDAPKWS 597
Cdd:COG4772  505 DNELGS--CSAAGGDRSTFTN-AGETRHQGLELALdydlLKGGGLGLPLFAAYTYTDAEFTSDFgPVFAGNRLPYVPRHQ 581
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 598 ASLWTRYELNDAiAFNAGAFYEGERFADSDNTITK------DAYTRVDVGATYKFNLsntDINLRLNIENLFDKSYLG-- 669
Cdd:COG4772  582 LTAGLGYEHGGW-TANLNGRYVSEQFTDAANTVADgsfgkiPSYTVLDLSASYDFGK---NLSLFAGVNNLFDKRYIAsr 657
                        730       740
                 ....*....|....*....|....
gi 746446932 670 -GGGTSNVTVGEGTNLRLAAQFSF 692
Cdd:COG4772  658 aPNYAAGIRPGPPRTVYAGLRLKF 681
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
8-647 1.81e-55

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 200.08  E-value: 1.81e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   8 IALLASITTSTYANTTDLERIEVKGSyfndykvdnangamRTSASLLETAQSVTVITDTIISEQLATTLGEVLTNDASL- 86
Cdd:COG4771   10 LALAAQAADALAEDATELEEVVVTAT--------------RTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVs 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  87 -TAGSQQRNREVFNLRGFElSSSTGYLRDG-------HQHWSHYQQ-PIEILQQVEVIKGPSSILYGQSGPGGLVNMVTK 157
Cdd:COG4771   76 vTRSGGRGGSSGISIRGLG-GDRVLVLIDGvpvnnpaLGGGGDLSYiPPDDIERIEVIRGPASALYGSDAIGGVINIITK 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 158 KPTAQTLFNASADVDQHGSTRFMVDAAGAlTESEDLRARGILVKQDVDYWREYQNG---ENRERDRFLGALVVDYDISDN 234
Cdd:COG4771  155 KPTDELEGSVSLGYGSNGNGTYSGSLSLG-GPGDKLSFLLSGSYRDRDGYLDYRNGgfvGNSGYERYNLNAKLGYRLSDN 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 235 ALVRVHYDRTDDEAglDTGAWIDDNANIIGNDKTIRDMSWaftdiTVENLGVDLEVFLTDNWQVKLGYNEQTFERQRFES 314
Cdd:COG4771  234 HRLSLSGGYSRQDR--DGGPPTLGDTEISSDNAGDRDTTT-----DRGNYSLRYNGDLGDNLDLSLYYSRTDRDSTNGSL 306
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 315 SPSRNSYDAQTNTYTSNpydrfdDWQFKTAFidfigefemaGIQHQFLIGAnslDYYYGQLRTSadsfsftagqneparp 394
Cdd:COG4771  307 GGSTGSFSDSDDTTYGL------ELDLTYPL----------GGNHTLTLGA---EYRYDDLDSS---------------- 351
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 395 disykTDLTKSETEYDYYGLYAQDLITFSEQWQVSVGARFDKQTREGQNNES-FLPKFGVLYHPNASATIYASYTEGFEP 473
Cdd:COG4771  352 -----SFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGASNYTaFSPRLGLRYDLSDNLTLRASYGRGFRA 426
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 474 -------QNETITNDKDINFGMEIDAVTSEQRELGIKWQLLDDRLLLSGAVFDISKNGTLVTEDLEAPIGSITTETNqVG 546
Cdd:COG4771  427 pslaelyGSGTGTPGRYVLGNPDLKPETSDNYELGLEYRLGNGGLSLSLTGFYTDIKDLIVLVPVGPGPGDVLQYEN-VG 505
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 547 EQRHKGFEVAAQGAATDRLFVMASAMYLDANYERANeelQGKRPTDAPKWSASLWTRYELNDAIAFNAGAFYEGERFADS 626
Cdd:COG4771  506 KARTYGLELELKYRLGKGLTLTASYTYLDSKIDDGD---TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTP 582
                        650       660
                 ....*....|....*....|....
gi 746446932 627 DNTI---TKDAYTRVDVGATYKFN 647
Cdd:COG4771  583 PSGRlegYTPGYTLLDLRASYKLT 606
PRK14050 PRK14050
TonB-dependent siderophore receptor;
8-681 1.02e-43

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 168.06  E-value: 1.02e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   8 IALLASITTSTYA----NTTDLERIEVKG---------SYFNDYKVDNANGAMRTSASLLETAQSVTVITDTIISEQLAT 74
Cdd:PRK14050  18 VALAALVLSGLVAaqegNTTQLETIVVEGgnaasatatGPVDGYVAKATATGSKTDTPITEIPQSVSVVGRQEMDDRGVT 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  75 T-LGEVLTNDASLTAG--SQQRNREVFNLRGFElSSSTGYLRDGHQHWSH----YQQPIEILQQVEVIKGPSSILYGQSG 147
Cdd:PRK14050  98 NkVDEALRYTPGVLSQpfGTDGDTDWFYIRGFD-ATQTGVFLDGLNLFSYgfggFQIDPFMLERVEVLKGPASVLYGGSN 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 148 PGGLVNMVTKKPTAQTLFNASADVDQHGSTRFMVDAAGALTESEDLRARgilVKQDVDYWREYQNGENRERDRFLGALVV 227
Cdd:PRK14050 177 PGGIVNMVSKRPLDEPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYR---VTGKVAGGDNYSDYSEDLRGFIMPQITY 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 228 DYDISDNALVRVHY---DRTDDEAGL--DTGAWIDDNANIIGNDKTIRDMSWAFTDITVENLGVDLEVFLTDNWQVKlgY 302
Cdd:PRK14050 254 APDDATSLTVYGYLsglDQVHVGNGFlpYVGTVVDAPFGKIDRDAFYGEPDIDNGSYAQQMLGYEFSHEFDNGWTFS--Q 331
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 303 NEQTFERQRFESSPSRNSY--------DAQTNTYTSNPYDRFDDWQFKTAFID--FIGEFEMAGIQHQFLIGansLDYYY 372
Cdd:PRK14050 332 NARYGHLHKHEKGPYTYGYvggatglpDPTGPDYMLNRIGFEHRSKVDSFSIDnrLEGEFDTGALTHNLLFG---LDYKY 408
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 373 GQLR--------TSADSFSFTAGqnEPARPDISY-KTDLTKSETeydyyGLYAQDLITFSEQWQVSVGARFD-------- 435
Cdd:PRK14050 409 YRLDqvqaccgaTPISATNPVYG--TTQGANFVYlDQILTQQQI-----GIYAQDQIRFGDGWLVTLNGRYDyvdtdsda 481
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 436 -KQTREGQNNESFLPKFGVLYHPNASATIYASYTEGFEPQNETITNdkdinfGMEIDAVTSEQRELGIKWQ--LLDDrlL 512
Cdd:PRK14050 482 rIGTSYESNDGALSGRAGLAYEFDNGLTPYVSAATFFNPLVGTLAS------GPPLKPEEGEQYEAGIKYEpsFIDG--L 553
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 513 LSGAVFDISKNGTLVTEDLeapigsiTTETNQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANY-ERANEELQGKRPT 591
Cdd:PRK14050 554 ITASVFQITKKNVTVTDPL-------TFASTQLGEVRSRGFELEGKVNLDDNWKALASFTYTDLEItEDANPSLIGNSPY 626
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 592 DAPKWSASLWTRYELND----AIAFNAGAFYEGERFADSDNTITKDAYTRVDVGATYKFNlsntDINLRLNIENLFDKSY 667
Cdd:PRK14050 627 LVPETQASLWLDYAVTDgafeGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYEKN----DWGASLNVANLFDKEY 702
                        730
                 ....*....|....*
gi 746446932 668 LGG-GGTSNVTVGEG 681
Cdd:PRK14050 703 VAGcQGLLVCGYGES 717
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
228-691 1.17e-43

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 163.79  E-value: 1.17e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  228 DYDISDNALVRVHYDRTDDEAGLDTGAWID---DNANIIGNDKTIRDMSWAFTDITVENLGVDLEVFLTDNWQVKLGYNe 304
Cdd:pfam00593   6 LDLLGDDTLLTLGYDYSRYTDGLDLGLTLDgygNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLG- 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  305 qtferQRFESSPSRNSYDAQTNTYTSNPYDRFDDWQFKTAFIDFIGEFEmagIQHQFLIGANSLDYYYGQLRTSADSFSF 384
Cdd:pfam00593  85 -----LRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLD---LSHDLLLGVELRTAGLDYRRLDDDAYDP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  385 TagqneparpDISYKTDLTKSETEYDYYGLYAQDLITFSEQWQVSVGARFDKQTREGQNNES-----------FLPKFGV 453
Cdd:pfam00593 157 Y---------DPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGggdnfsrsysaFSPRLGL 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  454 LYHPNASATIYASYTEGFE-PQ-NETITNDKDINFG------MEIDAVTSEQRELGIKWQllDDRLLLSGAVFDISKNGT 525
Cdd:pfam00593 228 VYKPTDNLSLYASYSRGFRaPSlGELYGSGSGGGGGavaggnPDLKPETSDNYELGLKYD--DGRLSLSLALFYIDIKNL 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  526 LVTEDLEAPIGSITTETNQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANYeRANEELQGKRPTDAPKWSASLWTRYE 605
Cdd:pfam00593 306 ITSDPDGPGLGGTVYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADD-DADADDTGNPLPNVPRHTANLGLTYD 384
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  606 L-NDAIAFNAGAFYEGE---RFADSDNTITKDAYTRVDVGATYKFnlsNTDINLRLNIENLFDKSY----LGGGGTSNVT 677
Cdd:pfam00593 385 FpLGGWGARLGARYVGSgerRYGDAANTFKTPGYTLVDLSAGYRL---NKNLTLRLGVNNLFDKYYkryySSGGGNLGGY 461
                         490
                  ....*....|....
gi 746446932  678 VGEGTNLRLAAQFS 691
Cdd:pfam00593 462 PGPGRTFYLGLSYK 475
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
46-670 2.44e-43

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 166.86  E-value: 2.44e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  46 AMRTSASLLETAQSVTVITdtiiSEQLA----TTLGEVLtndaSLTAGSQQRNR------EVFNLRGFELS--SSTGYLr 113
Cdd:PRK10044  69 GTKTDTPIEKTPQSISVVT----AEEMAlhqpKSVKEAL----SYTPGVSVGTRgasntyDHLIIRGFAASgqSQNNYL- 139
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 114 DGHQ----HWSHYQQPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNASADVDQHG--STRFmvDAAGAL 187
Cdd:PRK10044 140 DGLKlqgnFYNDAVIDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNlfQTGF--DFSDAL 217
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 188 TESEDLRARGILVKQDVDywreyQNGENRERDRFLGALVVDYDISDNA-LVRVHYDRTDDEAGLdtGAWIDDNA---NII 263
Cdd:PRK10044 218 DDDGVYSYRLTGLARSAN-----AQQKGSEEQRYAIAPSFTWRPDDKTnFTFLSYFQNEPETGY--YGWLPKEGtvePLP 290
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 264 GNDKTIRDmswaFTDITVEN--------LGVDLEVFLTDNWQVK--LGYNEQTFERQrfesSPSRNSYDAQTNTYTSNPY 333
Cdd:PRK10044 291 NGKRLPTD----FNEGAKNNtysrnekmVGYSFDHEFNDTFTVRqnLRYAENKTSQR----SVYGYGVCSDKGHYLNRGY 362
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 334 DRfDDWQFKTAFID--FIGEFEMAGIQHQFLIGA------NSLDYYYGqlrtSADSFSFTaGQNEPARPDISYKTD---- 401
Cdd:PRK10044 363 VV-DDEKLQNFSVDtqLQSKFATGDVDHTLLTGVdfmrmrNDINAWFG----YADSVPLL-NLYGPVNTDFDFNANsgpy 436
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 402 --LTKSETEydyyGLYAQDLITFsEQWQVSVGARFD----------KQTREGQNNESFLPKFGVLYHPNASATIYASYTE 469
Cdd:PRK10044 437 qiLNKQKQT----GLYVQDQAEW-DKWLVTLGGRYDwadqsslnrvNGTTDKRDDKQFTWRGGVNYLFDNGITPYFSYSE 511
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 470 GFEPQNETITNdkdinfGMEIDAVTSEQRELGIKWQLLDDRLLLSGAVFDISKNGTLvTEDLEAPIGSIttetnQVGEQR 549
Cdd:PRK10044 512 SFEPSSGTGKD------GNIFAPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNL-TADPENSFFSV-----QGGEIR 579
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 550 HKGFEVAAQGAATDRLFVMASAMYLDANYERANEeLQGKRPTDAPKWSASLWTRYELNDA----IAFNAGAFYEGERFAD 625
Cdd:PRK10044 580 ARGVELEAKAALSANVNVTGSYTYTDAEYTTDTT-YKGNTPAQVPKHMASLWADYTFFDGplsgLTLGTGGRYTGSSYGD 658
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*...
gi 746446932 626 SDNTITKDAYTRVDVGATY---KFNLSNTdiNLRLNIENLFDKSYLGG 670
Cdd:PRK10044 659 PANSFKVGSYTVVDALVKYdlaRFGMAGS--SVALNVNNLFDREYVAS 704
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
22-692 1.73e-40

catecholate siderophore receptor Fiu; Provisional


Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 158.82  E-value: 1.73e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  22 TTDLERIEVKGSYFNDYKVDNANGAmRTSASLLETAQSVTVITDTIISEQLATTLGEVLTNDASLTA------GSQQRNR 95
Cdd:PRK09840  38 TNADDTLVVEASTPSLYAPDQSADP-KFSQPLADTTQTITVISEQVIKDQGATNLTEALRNVPGVGTffagenGNTTTGD 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  96 EVFnLRGFELSSSTgYLrDGHQHWSHYQQPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNASADVDQHG 175
Cdd:PRK09840 117 AIY-MRGFDTSNSI-YV-DGIRDIGSISRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAW 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 176 STRFMVDAAGALTESEDLRARGILVKQDVDYWREYQN-----------GENRERDRFLGALVVD-YDISDNALVRVH--- 240
Cdd:PRK09840 194 FRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNerygvapsvafGLGTANRLYLNYLHVTqNNTPDGGIPTIGlpg 273
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 241 YDRTDDEAGLDTGAWIDDNANIIGNDKTirdmswaFTDITVENLGVDLEVFLTDNWQV----KLGYNEQTFERQRF--ES 314
Cdd:PRK09840 274 YSAPSAGRAALNHAGKVDTHNFYGTDSD-------YDDSTTDTATMRFEHDINDNTTLrnttRWSRVKQDYLLTAImgGA 346
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 315 SPSRNSYDAQTNTYTSNPYDRFDDWQFK--TAFIDFIGEFEMAGIQHQFLIG-----ANSLDYYYGQLRTSAdsfsftAG 387
Cdd:PRK09840 347 SNITTPTPSDVNTWTWSRTANTKDVSNKilTNQTNLTSTFYTGSIGHDVSTGveftrETQTNYGVNPVTLPA------VN 420
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 388 QNEPaRPDIS---YKTDLTKSETEYDYYGLYAQDLITFSEQWQVSVGARFDKQTRE-------------------GQNNE 445
Cdd:PRK09840 421 LYHP-DSSIHpggLTRNGANANGQTDTFAIYAFDTLQLTRDWELNGGIRLDNYHTEydsatacggsgrgaitcpaGVAKG 499
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 446 SFLP-------------KFGVLYHPNASATIYASYTEGFEP---QNETITNDKDINFGMEIDAVTSEQR--ELGIKWQLL 507
Cdd:PRK09840 500 SPVTtvdtaksgnlvnwKAGALYKLTENGNVYINYAVSQQPpggSNFALAQSGSGNSANRTDFKPQKANtsEIGTKWQVL 579
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 508 DDRLLLSGAVFDiskngTLVTEDLEA-PIGSITtetnQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANYerANEELQ 586
Cdd:PRK09840 580 DKRLLLTAALFR-----TDIENEVEQnDDGTYS----QYGKKRVEGYELSVAGNITPAWQVIAGYTQQKATV--KNGKDV 648
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 587 GKRPTDA----PKWSASLWTRYELNDAIAFNAGAFYEGERFADSDNTITK----DAYTRVDVGATYKFNlSNTDinLRLN 658
Cdd:PRK09840 649 AQDGSSSlpytPEHAFTLWSQYQATDDLSVGGGARYIGSMHRGSDGAVGTpaftEGYWVADAKLGYRVN-RNLD--LQLN 725
                        730       740       750
                 ....*....|....*....|....*....|....*.
gi 746446932 659 IENLFDKSYLGGGGTSN--VTVGEGTNLRLAAQFSF 692
Cdd:PRK09840 726 VYNLFDTDYVASINKSGyrYHPGEPRTFLLTANMHF 761
PRK10003 PRK10003
ferric-rhodotorulic acid outer membrane transporter; Provisional
5-692 2.80e-38

ferric-rhodotorulic acid outer membrane transporter; Provisional


Pssm-ID: 236640 [Multi-domain]  Cd Length: 729  Bit Score: 151.94  E-value: 2.80e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   5 SIYIALLASITtstYANTTDLERIEVKGSYFNDYKVDNANGAMRTSAS---LLETA----QSVTVITDTIISEQLATTLG 77
Cdd:PRK10003  23 CIALALLPSAA---FAAPATEDTVIVEGSATAPVDDGEQDYSVKTTSAgtkMQMTQrdipQSVSIVSQQRMEDQQLQTLG 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  78 EVLTNDASLTAGSQQRNREVFNLRGFELSSstgYLRDG-----HQHWS--HYQQPIEILQQVEVIKGPSSILYGQSGPGG 150
Cdd:PRK10003 100 EVMENTLGISKSQADSDRALYYSRGFQIDN---YMVDGiptyfESRWNlgDALSDTALFERVEVVRGATGLMTGTGNPSA 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 151 LVNMVTKKPTAQTLF-NASADVDQHGSTRFMVDAAGALTESEDLRARGILVKQDVDYWREYQNgenrERDRFLGAlVVDY 229
Cdd:PRK10003 177 AINMVRKHATSREFKgDVSAEYGSWNKQRYVADLQSPLTEDGKVRARIVAGYQNNDSWLDRYN----SEKTFFSG-IVDA 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 230 DISDNALVRVHYD--RTDDEA----GLDTgaWIDDNANIIGNDKTIRDMSWAFTDITVENLGVDLEVFLTDNWQVKLG-- 301
Cdd:PRK10003 252 DLGDLTTLSAGYEyqRIDVNSptwgGLPR--WNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNat 329
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 302 YNEQTFERQRF--ESSPSRNS---YDAQTNTYTSNPYDRFDDWQFKTAFIDFI-----GEFEMAGIQHQFLIGAN----S 367
Cdd:PRK10003 330 HSEVEFDSKMMyvDAYVDKATgmlVGPYSNYGPGFDYVGGTGWNSGKRKVDALdlfadGSYELFGRQHNLMFGGSyskqN 409
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 368 LDYYYGQLRTSADSF-SFTAGQNEPARPDISYKTDLTKSETEYDyyGLYAQDLITFSEQWQVSVGARF-----DKQTREG 441
Cdd:PRK10003 410 NRYFSSWANIFPDEIgSFYNFNGNFPQTDWSPQSLAQDDTTHMK--SLYAATRVSLADPLHLILGARYtnwrvDTLTYSM 487
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 442 QNNESfLPKFGVLYHPNASATIYASYTEGFEPQnetitNDKDINfGMEIDAVTSEQRELGIKWQLLDDRLLLSGAVFDIS 521
Cdd:PRK10003 488 EKNHT-TPYAGLVYDINDNWSTYASYTSIFQPQ-----NDRDSS-GKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIE 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 522 KNGTLVTEDLEAPIGSITTETNQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANYERANeelqGKRPtDAPKWSASLW 601
Cdd:PRK10003 561 QDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGN----AVNP-NLPRTTVKLF 635
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 602 TRYELND--AIAFNAGAFYEGERFADS-----DNTITKDAYTRVDVGATYKfnlSNTDINLRLNIENLFDKSYLGGGGTS 674
Cdd:PRK10003 636 TRYRLPVmpELTVGGGVNWQNRVYTDTvtpygTFRAEQGSYALVDLFTRYQ---VTKNFSVQGNVNNLFDKTYDTNVEGS 712
                        730
                 ....*....|....*...
gi 746446932 675 NVtVGEGTNLRLAAQFSF 692
Cdd:PRK10003 713 IV-YGAPRNFSITATYQF 729
PRK14049 PRK14049
ferrioxamine B receptor precursor protein; Provisional
16-666 1.37e-37

ferrioxamine B receptor precursor protein; Provisional


Pssm-ID: 172541 [Multi-domain]  Cd Length: 726  Bit Score: 149.67  E-value: 1.37e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  16 TSTYANTTDLERIEVKGSyfnDYKVDNANGAMRTSAS--------LLETAQSVTVITDTIISEQLATTLGEVL--TNDAS 85
Cdd:PRK14049  34 SVSNEASTALETLVVNGG---SGGVITADGYVATSSAtgakvdtpFLETPQSISSVTEQQLKDRNPQTLLETLayTPGAR 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  86 LTAGSQQRNREVFNLRGFELSSsTGYLRDGHQHW----SHYQQPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTA 161
Cdd:PRK14049 111 VGAFGFDPRFDAFFVRGFDVTY-TGVFRDNLRQPgassSIFKTEPYGLEGVSILRGPSSALYGASGAGGLFNLITKRPTE 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 162 QTLFNASADVDQHGSTRFMVDAAGALTESEDL--RARGILVKQDVDywreyQNGENRERDRFLGALVVDYDISDNALVRV 239
Cdd:PRK14049 190 EPLREVQVQYGTNNRYQGQFDFSGPVNETDPVyyRLTGLLRDADTE-----QVGVPDDRAYIAPAFTWKPDEDTRLTVLG 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 240 HYDRTddEAGlDTGAWIDDNanIIGNDKTIRDMSWAFTDITVEN--LGVDLEVFLTDNWQVKlgyneqtfERQRFESSPS 317
Cdd:PRK14049 265 EYSRT--KTG-GTAAYYNDP--LTGEVTDIFAGNPAFNDSVQKQgrIGYEFEHRLNDTFVFR--------QNARVSTLNI 331
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 318 RNSYdaqTNTYTSNPYD---------RFDDWQfkTAFI---DFIGEFEMAGIQHQFLIGansLDYYYGQLRT-SADSFSF 384
Cdd:PRK14049 332 DADW---AFAYAPNAADptlldssagTYDERL--TAFVidnQLEAKFDTGAFEHTLLAG---VDYTKLRFRAlNGRGVSP 403
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 385 TAGQNEPA--RPDISYKTDLTKSETEYDYyGLYAQDLITFsEQWQVSVGARFD--------------KQTREGQNNESFL 448
Cdd:PRK14049 404 PLDTKNPTqgRPVAAIDFSTRTVQDQWQL-GTYLQDQIRY-DAWTLTAGGRYDwvstdtdttdlatdSLTTVSQKDKEFS 481
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 449 PKFGVLYHPNASATIYASYTEGFEPqNETITNDKDINFgmeiDAVTSEQRELGIKWQLLDDRLLLSGAVFDISKNGTLVT 528
Cdd:PRK14049 482 GRIGLTYETDFGLAPYISYSTAFSP-NAGFNRATNQPF----KPTESEQQEVGVKYLLPNSNTLITAALFNIDQTNGLYY 556
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 529 EDLEAPIGSITTETnQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANYERANEELQGKRPTDAPKWSASLWTRYELND 608
Cdd:PRK14049 557 EVVFLAAGPTNIQV-QRGKLRSRGFELEANTSLDNGLSLIASYTYTDVKIIQGPEGTIGNEVSSVPNHMASAWAHYTLPE 635
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 746446932 609 -----AIAFNAGAFYEGERFADSDNTITKDAYTRVDVGATYKFNLSNTD---INLRLNIENLFDKS 666
Cdd:PRK14049 636 ggplyGLGLGAGARFVGSSYGNDQNTFKNSSRVLFDASVGYDFAAIDKKyegLMLQVNATNLFDRR 701
TonB-hemin TIGR01785
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
46-692 1.84e-30

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 127.51  E-value: 1.84e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   46 AMRTSASLLETAQSVTVITDTIISEQLATTLGEVLTNDASLT-AGSQQRNREVFNLRGFELS--------SSTGYLRDGH 116
Cdd:TIGR01785   8 ATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDvTGGGRPPGQSINIRGLQDNrvlvvvdgARQNYQRGGA 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  117 QHWSHYQQPiEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPT----AQTLFNASADVD-QHGSTRFMVDAAGALTESE 191
Cdd:TIGR01785  88 HNGSLFVDP-ELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAAdllrPGQLFGGLAKLSyGSNNNSFGGSVAVAGRLDD 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  192 DLRArgiLVKQDVDYWREYQNGENRErdrflgaLVVDYDISDNALVRVHYdRTDDEAGLDTG-----AWIDDNANIIGND 266
Cdd:TIGR01785 167 NLDA---LVAATYRDGGNYRNGNKEE-------ATNSAYVQKNLLAKLGW-QLDDAQRLEFSyftteGSLDEAQNSGPGT 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  267 KTIRDMSWAFTDITVENLGVDLEVFLTD------NWQVKLGYNEQTFERQRFESSPSRnSYDAQTNTYTSNPYDRFddwq 340
Cdd:TIGR01785 236 EYVLGSSSTLLASSTRDRSATLTYNWTPednpwlDATASLYYNRTENDNDRSARGVGR-EEGYQYTTYGATLQNTS---- 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  341 fktafidfigEFEMAGIQHqFLIGansLDYYYGQLRTSADSFSfTAGQNEPARPDisYKTDLTkseteydyyGLYAQDLI 420
Cdd:TIGR01785 311 ----------RFDVASWST-LTYG---VDWMKDKRRTESFDPN-SVTTIVPNPPS--AKEYFF---------GLFLQDNI 364
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  421 TF-SEQWQVSVGARFDKQTREGQNNES----------FLPKFGVLYHPNASATIYASYTEGFEPQ--NETITNDKdiNFG 487
Cdd:TIGR01785 365 PLlDDRLTLSAGLRYDHYKLSPKTTADteavdrsysrWSPSLGLSYKPVDWLTLYASYSQGFRAPsiDELYGTGD--HPG 442
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  488 ME----------IDAVTSEQRELGIkwQLLDDRLLLSG-------AVFD------ISKnGTLVTEDLEAPIGSITTETNq 544
Cdd:TIGR01785 443 TPggytfapnpnLKPETSKTWELGA--NLSFDNLLLDNdqlqfkvAYFYndvkdfIDL-TIGVTDNVTAGMNNITQYVN- 518
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  545 VGEQRHKGFEVAAQgAATDRLFVMASAMYLDAnyeRANEELQGKRPTDAPKWSASLWTRYELNDAIAFNAGAFYEGERFA 624
Cdd:TIGR01785 519 IDGARIRGIEASAS-YDAGLWATGLSYGYTIG---KDQNTNQWLSNIPPLKLVVTVGYRFPDRRLDLGAKAAYYERQSES 594
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 746446932  625 DSDN------TITKDAYTRVDVGATYKFNlSNTDINLRLNIENLFDKSYLGGGGTsnVTVGEGTNLRLAAQFSF 692
Cdd:TIGR01785 595 PTTEdvaangLLTTPGYTVVDLYATYQPN-AVKGLTVRFGVNNLTDRKYTPAQSV--PGAGPGRNFKGSVKYQF 665
BtuB COG4206
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
46-262 4.41e-18

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];


Pssm-ID: 443355 [Multi-domain]  Cd Length: 276  Bit Score: 84.92  E-value: 4.41e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  46 AMRTSASLLETAQSVTVITDTIISEQLATTLGEVLTNDASLT------AGSQQRnrevFNLRGFElSSSTGYLRDG---- 115
Cdd:COG4206    5 ATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQvsssggPGSAAS----ISIRGLG-SNQTLVLIDGvpln 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 116 -----HQHWSHYqqPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNASADVDQHGSTRFMVDAAGAlteS 190
Cdd:COG4206   80 dpslgGVDLSLI--PPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSGG---A 154
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 746446932 191 EDLRARGILVKQDVDYWReYQNGENRERDRF---LGALVVDYDISDNALVRVHYDRTDDEAGLDTGAWIDDNANI 262
Cdd:COG4206  155 GKFSYSLSASYRRSDGYR-YNDPDLRNNDGYentSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRNLRL 228
Plug pfam07715
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
52-150 8.95e-18

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.


Pssm-ID: 462243 [Multi-domain]  Cd Length: 107  Bit Score: 79.24  E-value: 8.95e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   52 SLLETAQSVTVITDTIISEQLATTLGEVLTNDASLTAGSQQRNR-EVFNLRGFElSSSTGYLRDGHQHWSHYQQ------ 124
Cdd:pfam07715   1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGGgSSISIRGFG-SNRVLVLVDGVPLNSGGGGsvdlns 79
                          90       100
                  ....*....|....*....|....*..
gi 746446932  125 -PIEILQQVEVIKGPSSILYGQSGPGG 150
Cdd:pfam07715  80 iDPEDIERVEVLKGPASALYGSGAIGG 106
PRK13484 PRK13484
IreA family TonB-dependent siderophore receptor;
9-692 1.36e-14

IreA family TonB-dependent siderophore receptor;


Pssm-ID: 139605 [Multi-domain]  Cd Length: 682  Bit Score: 77.35  E-value: 1.36e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932   9 ALLASITTSTYANTTD-LERIEVKGSYFndykvdnangamrtSASLLETAQSVTVITDTIISEQLATTLGEVLTN--DAS 85
Cdd:PRK13484  13 VMCSAVISSGYASSDKkEDTLVVTASGF--------------TQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDveGIS 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  86 LTAGSqqrNREVFNLRGFElSSSTGYLRDGHQHWSH-------------YQQPIEILQQVEVIKGPSSILYGQSGPGGLV 152
Cdd:PRK13484  79 ITGGN---EKPDISIRGLS-GDYTLILVDGRRQSGResrpngsggfeagFIPPVEAIERIEVIRGPMSSLYGSDAIGGVI 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 153 NMVTKKPTAQTLFNAsadVDQHGSTRFMVDAAGALTEseDLRARGILVKQDVD-------YWREYQN---GENRERDRFL 222
Cdd:PRK13484 155 NIITKPVNNQTWDGV---LGLGGIIQEHGKFGNSTTN--DFYLSGPLIKDKLGlqlyggmNYRKEDSisqGTPAKDNKNI 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 223 GAlVVDYDISDNALVRVHYDRTDDEAGLDTGAWIDDNANIiGNDKTIRDM--------SWAFT-DITVENLGVDLEVflt 293
Cdd:PRK13484 230 TA-TLQFTPTESQKFVFEYGKNNQVHTLTPGESLDAWTMR-GNLKQPNSKrethnsrsHWVAAwNAQGEILHPEIAV--- 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 294 dnwqvklgYNEQTFERQRFESSPSRNSYDAQTNTYTSNPYDRFDDWQFkTAFIDfigefemagiQHQFLIGANsldYYYG 373
Cdd:PRK13484 305 --------YQEKVIREVKSGKKDKYNHWDLNYESRKPEITNTIIDAKV-TAFLP----------ENVLTIGGQ---FQHA 362
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 374 QLRTSAdsfsfTAGQNEPARPDISYKTDLTKSETEYdyyglyaqdliTFSEQWQVSVGARFDKQTREGQNnesFLPKFGV 453
Cdd:PRK13484 363 ELRDDS-----ATGKKTTETQSVSIKQKAVFIENEY-----------AATDSLALTGGLRLDNHEIYGSY---WNPRLYA 423
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 454 LYHPNASATIYASYTEGFE--------PQNETITND-KDINFG-MEIDAVTSEQRELGIKWQLlDDRLLLSGAVFDISKN 523
Cdd:PRK13484 424 VYNLTDNLTLKGGIAKAFRapsirevsPGFGTLTQGgASIMYGnRDLKPETSVTEEIGIIYSN-DSGFSASATLFNTDFK 502
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 524 GTLVTEDL--EAPIGSITT-ETNQVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANYERANEELQGKR----PTD-APK 595
Cdd:PRK13484 503 NKLTSYDIgtKDPVTGLNTfIYDNVGEANIRGVELATQIPVYDKWHVSANYTFTDSRRKSDDESLNGKSlkgePLErTPR 582
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 596 WSASLWTRYELNDAIAFNAGAFYEGER-FADSDNTIT----KDAYTRVDVGATYKFNlSNTDINLR-LNIENLFDKSYLG 669
Cdd:PRK13484 583 HAANAKLEWDYTQDITFYSSLNYTGKQiWAAQRNGAKvprvRNGFTSMDIGLNYQIL-PDTLINFAvLNVTDRKSEDIDT 661
                        730       740
                 ....*....|....*....|...
gi 746446932 670 GGGtsNVTVGEGTNLRLAAQFSF 692
Cdd:PRK13484 662 IDG--NWQVDEGRRYWANVRVSF 682
PRK10064 PRK10064
catecholate siderophore receptor CirA; Provisional
46-665 1.82e-08

catecholate siderophore receptor CirA; Provisional


Pssm-ID: 236646 [Multi-domain]  Cd Length: 663  Bit Score: 57.59  E-value: 1.82e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  46 AMRTSASLLETAQSVTVITDTIISEQLATTLGEVLTNDASLTAGSQQRNREVFNLRGFElSSSTGYLRDG---------- 115
Cdd:PRK10064  37 ASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLD-SSYTLILIDGkrvnsrnavf 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 116 -HQHWSHYQQPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQtlfnasadvdQHGStrFMVDaagalTESEDLR 194
Cdd:PRK10064 116 rHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQK----------WHGT--VTVD-----TTIQEHR 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 195 ARgilvkqdvdywreyqnGENRERDRFLGALVVDYDISDNALVRVHYDRTDDEAGLDTGAwiddnaniigNDKTIRDMSW 274
Cdd:PRK10064 179 DR----------------GDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTD----------TGETPRIEGF 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 275 AFTDITVEnlgvdLEVFLTDNWQVKLGYNeqtFERQ-RFESSPSRNSYDAQTNTYTSNpydrfDDWQFKTAFIDFIGE-- 351
Cdd:PRK10064 233 TSRDGNVE-----FAWTPNQNHDFTAGYG---FDRQdRDSDSLDKNRLERQNYSLSHN-----GRWDYGNSELKYYGEkv 299
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 352 -FEMAGIQHQFLIGANSLD-YYYGQLRTSADSFSFTAGQNEPARPDISYKTDLTKSETEYDYYGLYAQDLITFSEQWQVS 429
Cdd:PRK10064 300 eNKNPGNSSPITSESNSIDgKYTLPLTAINQFLTFGGEWRHDKLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALT 379
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 430 VGARFDKQTREGQNNEsflPKFGVLYHPNASATIYASYTEGFEP----QNET--ITND----KDINFGMEIDAVTSEQRE 499
Cdd:PRK10064 380 TGVRMDDHETYGDHWS---PRAYLVYNATDTVTVKGGWATAFKApsllQLSPdwTSNScrgaCKIVGSPDLKPETSESWE 456
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 500 LGIKWQLLDDRLLLSGAVFDISKNGT------LVTEDL-EAP-----IGSITTETNQ---------VGEQRHKGFEVAAQ 558
Cdd:PRK10064 457 LGLYYMGEEGWLEGVESSVTVFRNDVddrisiSRTSDVnAAPgyqnfVGFETNGRGRrvpvfryynVNKARIQGVETELK 536
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 559 GAATDRLFVMASAMYLDAnyeRANEELQGKRPTDAPKWSASL---WTRYELNDAiAFNAGAFYEGERFADSDNTITKDAY 635
Cdd:PRK10064 537 IPFNDEWKLSLNYTYNDG---RDVSNGENKPLSDLPFHTANGtldWKPLALEDW-SFYVSGNYTGQKRADSATAKTPGGY 612
                        650       660       670
                 ....*....|....*....|....*....|
gi 746446932 636 TRVDVGATYKfnlSNTDINLRLNIENLFDK 665
Cdd:PRK10064 613 TIWNTGAAWQ---VTKDVKLRAGVLNLGDK 639
PRK13524 PRK13524
FepA family TonB-dependent siderophore receptor;
125-683 1.78e-07

FepA family TonB-dependent siderophore receptor;


Pssm-ID: 237410 [Multi-domain]  Cd Length: 744  Bit Score: 54.65  E-value: 1.78e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 125 PIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQ------TLFNASADVDQHGSTRFMVDAAGALTESEDLRARGI 198
Cdd:PRK13524 142 PPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKPTGEwhgswnTYFNAPEHKAEGATKRTNFSLSGPLGDELSFRLYGN 221
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 199 LVKQDVDYWREYQNGENRERDRFLGAL------VVDYDIsdNALVRvhYDRTDDEA-GLDTGA------WIDDNANIIGN 265
Cdd:PRK13524 222 LNKTQADAWDINQGHQSARTGSYAGTLpagregVINKDI--NGLLR--WDFAPLQSlELEAGYsrqgnlYAGDTQNTNSD 297
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 266 dktirdmswaftDITVENLGVDLEVFLTDNWQVKlgyneqtfERQRFESSPSRNSYDAQTNTYTS--------NPYDRFD 337
Cdd:PRK13524 298 ------------ALVKSLYGKETNRMYRQNYALT--------HRGGWDNGVSTSNYAQYEHTRNSrlpeglagGTEGIFN 357
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 338 --DWQFKTAFIDFI---GEFEM---AGIQHQFLIGAnslDYYYGQLRtsaDSFSFTAGQNE-PARPDISYKTDLTKSETE 408
Cdd:PRK13524 358 ekATQFSTIDLDDVmlhSEVNLpfdLLVNQTLTLGT---EWNQQRMK---DPSSNTQALTSgGAIPGVSATGRSPYSKAE 431
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 409 ydYYGLYAQDLITFSEQWQVSVGARFDKQTREGQN-----------NESFLPKFGV--------LYHPNaSATIYASYTE 469
Cdd:PRK13524 432 --IFSLFAEDNMELTDSTMLTPGLRFDHHSIVGNNwspslnlsqglGDDFTLKMGIaraykapnLYQTN-PNYILYSKGQ 508
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 470 GFEPQNET----ITNDkdinfgmEIDAVTSEQRELGIKWQllDDRLLLSGAVF-----DISKNGTLVTEDLEAPIGSITT 540
Cdd:PRK13524 509 GCYASAGNgcylQGND-------DLKAETSVNKEIGLEFK--RDGWLAGLTWFrndyrNKIEAGYVPVGTNSVGKTDIYQ 579
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 541 ETNqVGEQRHKGFEVAAQGAATDRLFVMASAMYLDANYERANeelqGKRPTDAPKWSASLWTRYELNDAIAFNAGAFYEG 620
Cdd:PRK13524 580 WEN-VPKAVVEGLEGTLNVPVSETVNWTNNLTYMLQSKNKTT----GDPLSIIPEYTLNSTLSWQATEDLSLQSTFTWYG 654
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 746446932 621 --------ERFADSDNTITKD--AYTRVDVGATYKFnlsNTDINLRLNIENLFDKSYLGGG---GTSNVTVGEGTN 683
Cdd:PRK13524 655 kqkpkkynYKGQPVTGSATKEvsPYSIVGLSATYDV---TKNVSLTGGVDNLFDKRLWREGnaqTTGDLIAGAGAY 727
PRK13486 PRK13486
TonB-dependent receptor;
35-304 1.31e-06

TonB-dependent receptor;


Pssm-ID: 139606 [Multi-domain]  Cd Length: 696  Bit Score: 51.56  E-value: 1.31e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932  35 FNDYKVDNANGAMRTSAS-----LLETAQSVTVITDTIISEQLATTLGEVL--TNDASLTAGSQQRNREVFNLRGFElSS 107
Cdd:PRK13486  16 FSASSIAAAEDVMIVSASgyekkLTNAAASVSVISQEELQSSQYHDLAEALrsVEGVDVESGTGKTGGLEISIRGMP-AS 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 108 STGYLRDGHQHW--------------SHYQQPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNASADVDQ 173
Cdd:PRK13486  95 YTLILIDGVRQGgssdvtpngfsamnTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNAGLNL 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 174 H------GSTRFMVDAAGALTE-SEDLRARGILVKQD--------------VDYWREYQNGENRERDRFLGA----LVVD 228
Cdd:PRK13486 175 QesnkwgNSSQFNFWSSGPLVDdSVSLQVRGSTQQRQgssvtslsdtaatrIPYPTESQNYNLGARLDWKASeqdvLWFD 254
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 746446932 229 YDISdnalvRVHYDRTDDEAGLDTGawiddnaniiGNDKTIRdmsWAFTDITvenLGVDlEVFLTDNWQVKLGYNE 304
Cdd:PRK13486 255 MDTT-----RQRYDNRDGQLGSLTG----------GYDRTLR---YERNKIS---AGYD-HTFTFGTWKSYLNWNE 308
PRK13528 PRK13528
outer membrane receptor FepA; Provisional
125-443 2.84e-06

outer membrane receptor FepA; Provisional


Pssm-ID: 237413 [Multi-domain]  Cd Length: 727  Bit Score: 50.53  E-value: 2.84e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 125 PIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPT-----AQTLFNASADVDQHGST-RFMVDAAGALT-ESEDLRARG 197
Cdd:PRK13528 140 PPEMVERIEVIRGPAAARYGSGAAGGVVNIITKRPTndwhgSLSLYTNQPESSKEGATrRANFSLSGPLAgDALTMRLYG 219
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 198 ILVKQDVDYW--REYQNGEN---RERdrflgalVVDYDIsdNALVRVhydRTDDEAGLDTGAWIDDNANIIGNDkTIRDM 272
Cdd:PRK13528 220 NLNKTDADSWdiNSSAGTKNaagREG-------VRNKDI--NGVLSW---KMTPQQILDFEAGYSRQGNIYAGD-TQNSN 286
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 273 SWAFTDiTVENLGVDLEVFLTDNW-----------QVKLG-YNEQTFERQRFESSPSR-NSYDAQTNTYTSNpydRFDDW 339
Cdd:PRK13528 287 SSAVTE-SLAKSGKETNRLYRQNYglthngiwdwgQSRLGfYYEKTNNTRMNEGLAGGgEGRITADQTFTTS---RLESY 362
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 340 QFKtafidfiGEFEM---AGIQHQFLIGAnslDYYYGQLRtsaDSFSFTAGQNEPARPDISYKTDLTKSETEYDYYGLYA 416
Cdd:PRK13528 363 RTS-------GELNVplnWLFEQTLTVGA---EWNRDELN---DPSSTSLTVKDGDIGGISGSAADRSSKNKSEISALYV 429
                        330       340
                 ....*....|....*....|....*..
gi 746446932 417 QDLITFSEQWQVSVGARFDKQTREGQN 443
Cdd:PRK13528 430 EDNIEPVPGTNLIPGLRFDYHSEFGSN 456
PRK13483 PRK13483
ligand-gated channel protein;
125-665 6.02e-05

ligand-gated channel protein;


Pssm-ID: 184080 [Multi-domain]  Cd Length: 660  Bit Score: 46.31  E-value: 6.02e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 125 PIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKpTAQTLfnasadvdqHGSTRfmVDAAgaltesedlrargilVKQDV 204
Cdd:PRK13483 131 PLAAIERIEVIRGPMSSLYGSDAIGGVINIITRK-VPNEW---------QGEVR--LDTT---------------LQENS 183
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 205 DYWREYQNgenrerDRFL-GALvvdydISDNALVRVHYDRTD-DEAGLDTGawiddnaniigndktirdmswaFTDITVE 282
Cdd:PRK13483 184 DSGNVYQA------NFFVnGPL-----IKDLLGLQLYGQYTQrEEDDIEGG----------------------YRDKDAR 230
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 283 NLGVDLEVFLTDNWQVKLgynEQTFERQRFESS---------PSRNSYDAQTNTYTSNPYDRfddwqfKTAFIDFIGEFE 353
Cdd:PRK13483 231 SLTAKLALTPNEDHDIML---EVGTSNQERDSTvgktvaplaPGESCGRRGCPESSTTEYER------STVSLSHTGRWD 301
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 354 MAG----IQHqfliganslDYYYGQLR-------TSADSFSFTAGQNEPARPDISYK----TDLT------KSETEYDYY 412
Cdd:PRK13483 302 FGTsdtyIQH---------EEFDNKSRemkikntDFQSSLVAPLGQEHTLTFGAAYNhqdlTDETsnqisdLTDISRTQW 372
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 413 GLYAQDLITFSEQWQVSVGARFDKQTREGQNnesFLPK-FGVlYHPNASATIYASYTEGFE-PQNETITND-------KD 483
Cdd:PRK13483 373 AVFSEDEWRIADDFALTGGLRLDHDENFGGH---VSPRvYGV-WNLAPSWTVKGGVSTGFRaPSLRQTTPDwgqvsrgGN 448
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 484 INFGMEIDAVTSEQRELGIKWQlLDDRLLLSGAVFD------ISKNGTLVTEDLEAP--IGSITTETNQVGEQRHKGFEV 555
Cdd:PRK13483 449 IYGNPDLKPETSLNKELGLYYD-LGSGLTASLTVFYnefkdkITRVACPATQCTDGPnqFGADPTTYVNIDEAVTQGVEA 527
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 556 AAQGAATDRLFVMASAMYLDAnyERANEELQGKRPTDAPKWSASLWTRYELNDAIAFNAGAFYEGERFAD----SDNTIT 631
Cdd:PRK13483 528 SLSYPITSTLSLSGNYTYTDS--EQKSGAYKGSPLNQLPKHLFQASLNWEPTDRLNSWARVNYRGEESQPttgpSSSSFI 605
                        570       580       590
                 ....*....|....*....|....*....|....
gi 746446932 632 KDAYTRVDVGATYKFnlsNTDINLRLNIENLFDK 665
Cdd:PRK13483 606 APSYTFLDLGANYQL---TDNLKLSAGIYNLFDK 636
btuB PRK10641
TonB-dependent vitamin B12 receptor BtuB;
123-258 7.68e-05

TonB-dependent vitamin B12 receptor BtuB;


Pssm-ID: 236730 [Multi-domain]  Cd Length: 614  Bit Score: 45.75  E-value: 7.68e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 123 QQPIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKPTAQTLFNA----------SADVDQHGSTRFMVDAAGALTESed 192
Cdd:PRK10641 118 QIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPGTTLSAgwgsngyqnyDGSTQQQLGDNTRVTLAGDYTYT-- 195
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 746446932 193 lraRGILVKQDVDYWREYQNgenrERDRFLGALV---VDYDISDN--ALVRVH-YD-RTDDEAGLDTGAWIDD 258
Cdd:PRK10641 196 ---KGFDVVAYGNTGTQAQP----DRDGFMSKTLwggLEHQFNDQwsGFVRGYgYDnRTDYDAYYSPGSPLID 261
PRK13513 PRK13513
ligand-gated channel protein;
125-220 5.33e-04

ligand-gated channel protein;


Pssm-ID: 184104 [Multi-domain]  Cd Length: 659  Bit Score: 43.22  E-value: 5.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746446932 125 PIEILQQVEVIKGPSSILYGQSGPGGLVNMVTKKptAQTLFNASAdvdqHGSTRFMVD------------AAGALTESE- 191
Cdd:PRK13513 133 PLAAIERIEVVRGPMSSLYGSDAMGGVINIITRK--VQKEWHGSL----RADATLQEDsksgdifqtnayASGPLIDGLl 206
                         90       100
                 ....*....|....*....|....*....
gi 746446932 192 DLRARGILVKQDVDywrEYQNGENRERDR 220
Cdd:PRK13513 207 GLKVSGLLSHRSED---KIIDGYNEQRMR 232
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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